CsGy5G018820 (gene) Cucumber (Gy14) v2

Overview
NameCsGy5G018820
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionglucan endo-1,3-beta-glucosidase 6
LocationChr5 : 25225171 .. 25225657 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTTACACCCATATTACATTTAAAAACACCTAACCTGCAATTCATCCAAATCCAACATTACATTACATTACACACACACAAAATAAAATATATGGGACACCCAAAATTATGGGGATCATTATTATTGGTAGTTTGTTGTTTGTCACTCGTGAAGAGTGGATTCGGGTTCGCTTGCAATTGGGGGACACGATCGAGTCATCCACTCCCACCCGATATTGTGGTTAAATTGATGAAGGACAATGGGTTCAATAAAGTTAAGCTATTTGAAGCCGATCCAGGTGCGCTTCAGGCTCTTGGCAATTCTGGTCTTCAAGTTATGCTTGGAATTCCTAATGAGTTCTTAGCACCCCTTGCTAGTAGTGTACGTGTTGCGGAGAATTGGGTCGCAAAAAATGTTTCTTATTTCATTTCTAATTTTGGTACCAATATCAGGTAATAATTCGATGATTCGTTTTTTTAATTATTATTTTTTATAAAAGTAATTGA

mRNA sequence

CTTTTACACCCATATTACATTTAAAAACACCTAACCTGCAATTCATCCAAATCCAACATTACATTACATTACACACACACAAAATAAAATATATGGGACACCCAAAATTATGGGGATCATTATTATTGGTAGTTTGTTGTTTGTCACTCGTGAAGAGTGGATTCGGGTTCGCTTGCAATTGGGGGACACGATCGAGTCATCCACTCCCACCCGATATTGTGGTTAAATTGATGAAGGACAATGGGTTCAATAAAGTTAAGCTATTTGAAGCCGATCCAGGTGCGCTTCAGGCTCTTGGCAATTCTGGTCTTCAAGTTATGCTTGGAATTCCTAATGAGTTCTTAGCACCCCTTGCTAGTAGTGTACGTGTTGCGGAGAATTGGGTCGCAAAAAATGTTTCTTATTTCATTTCTAATTTTGGTACCAATATCAGTAATTGA

Coding sequence (CDS)

ATGGGACACCCAAAATTATGGGGATCATTATTATTGGTAGTTTGTTGTTTGTCACTCGTGAAGAGTGGATTCGGGTTCGCTTGCAATTGGGGGACACGATCGAGTCATCCACTCCCACCCGATATTGTGGTTAAATTGATGAAGGACAATGGGTTCAATAAAGTTAAGCTATTTGAAGCCGATCCAGGTGCGCTTCAGGCTCTTGGCAATTCTGGTCTTCAAGTTATGCTTGGAATTCCTAATGAGTTCTTAGCACCCCTTGCTAGTAGTGTACGTGTTGCGGAGAATTGGGTCGCAAAAAATGTTTCTTATTTCATTTCTAATTTTGGTACCAATATCAGTAATTGA

Protein sequence

MGHPKLWGSLLLVVCCLSLVKSGFGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEADPGALQALGNSGLQVMLGIPNEFLAPLASSVRVAENWVAKNVSYFISNFGTNISN
Homology
[Close]
BLAST of CsGy5G018820 vs. NCBI nr
Match: XP_004150617.1 (PREDICTED: glucan endo-1,3-beta-glucosidase 6 [Cucumis sativus] >XP_011655450.1 PREDICTED: glucan endo-1,3-beta-glucosidase 6 [Cucumis sativus] >XP_011655451.1 PREDICTED: glucan endo-1,3-beta-glucosidase 6 [Cucumis sativus] >KGN51470.1 hypothetical protein Csa_5G561790 [Cucumis sativus])

HSP 1 Score: 238.4 bits (607), Expect = 1.2e-59
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MGHPKLWGSLLLVVCCLSLVKSGFGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEA 60
           MGHPKLWGSLLLVVCCLSLVKSGFGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEA
Sbjct: 1   MGHPKLWGSLLLVVCCLSLVKSGFGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEA 60

Query: 61  DPGALQALGNSGLQVMLGIPNEFLAPLASSVRVAENWVAKNVSYFISNFGTNI 114
           DPGALQALGNSGLQVMLGIPNEFLAPLASSVRVAENWVAKNVSYFISNFGTNI
Sbjct: 61  DPGALQALGNSGLQVMLGIPNEFLAPLASSVRVAENWVAKNVSYFISNFGTNI 113

[Close]
BLAST of CsGy5G018820 vs. NCBI nr
Match: XP_008467025.1 (PREDICTED: glucan endo-1,3-beta-glucosidase 6 [Cucumis melo] >ADN33707.1 glucan endo-13-beta-glucosidase precursor [Cucumis melo subsp. melo])

HSP 1 Score: 221.5 bits (563), Expect = 1.5e-54
Identity = 105/113 (92.92%), Postives = 107/113 (94.69%), Query Frame = 0 

Query: 1   MGHPKLWGSLLLVVCCLSLVKSGFGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEA 60
           MG  KLWGSLLLVVCCL  VK G+GFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEA
Sbjct: 1   MGRSKLWGSLLLVVCCLLFVKGGWGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEA 60

Query: 61  DPGALQALGNSGLQVMLGIPNEFLAPLASSVRVAENWVAKNVSYFISNFGTNI 114
           DPGALQALGNSGLQVMLGIPNEFLA LASSVRVAENWVAKNVSYF+SNFGTNI
Sbjct: 61  DPGALQALGNSGLQVMLGIPNEFLASLASSVRVAENWVAKNVSYFVSNFGTNI 113

[Close]
BLAST of CsGy5G018820 vs. NCBI nr
Match: XP_022146364.1 (glucan endo-1,3-beta-glucosidase 5-like [Momordica charantia])

HSP 1 Score: 194.5 bits (493), Expect = 2.0e-46
Identity = 94/117 (80.34%), Postives = 103/117 (88.03%), Query Frame = 0 

Query: 1   MGHPKLWGSLLLVVCCL----SLVKSGFGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVK 60
           MG P  W  LLL++ CL     ++K   GFACNWGTRSSHPLPPDIVVKLMKDNGFNKVK
Sbjct: 1   MGLP--WQLLLLIISCLGYEAGVLKGAVGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVK 60

Query: 61  LFEADPGALQALGNSGLQVMLGIPNEFLAPLASSVRVAENWVAKNVSYFISNFGTNI 114
           LFEADPGALQALGNSGLQVMLG+PNEFLAPLA+SVRVAENWV+KNVSYF+SNFGT+I
Sbjct: 61  LFEADPGALQALGNSGLQVMLGVPNEFLAPLATSVRVAENWVSKNVSYFVSNFGTDI 115

[Close]
BLAST of CsGy5G018820 vs. NCBI nr
Match: XP_022953659.1 (glucan endo-1,3-beta-glucosidase 5-like [Cucurbita moschata])

HSP 1 Score: 194.1 bits (492), Expect = 2.6e-46
Identity = 96/116 (82.76%), Postives = 102/116 (87.93%), Query Frame = 0 

Query: 1   MGHPKLWGSLLLVVCCL---SLVKSGFGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKL 60
           MGHP L    LL+V CL    LVK   GFACNWGTRSSHPLPPDIVVKL+KDNGFNKVKL
Sbjct: 1   MGHPCL--LFLLIVSCLGHEGLVKGALGFACNWGTRSSHPLPPDIVVKLIKDNGFNKVKL 60

Query: 61  FEADPGALQALGNSGLQVMLGIPNEFLAPLASSVRVAENWVAKNVSYFISNFGTNI 114
           FEADPGALQALGNSGLQVMLGIPNEFLAPL+S+VRVAE WVAKNVSYF+SNFGT+I
Sbjct: 61  FEADPGALQALGNSGLQVMLGIPNEFLAPLSSTVRVAEEWVAKNVSYFVSNFGTDI 114

[Close]
BLAST of CsGy5G018820 vs. NCBI nr
Match: XP_023540642.1 (glucan endo-1,3-beta-glucosidase 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194.1 bits (492), Expect = 2.6e-46
Identity = 96/116 (82.76%), Postives = 102/116 (87.93%), Query Frame = 0 

Query: 1   MGHPKLWGSLLLVVCCL---SLVKSGFGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKL 60
           MGHP L    LL+V CL    LVK   GFACNWGTRSSHPLPPDIVVKL+KDNGFNKVKL
Sbjct: 1   MGHPCL--LFLLIVSCLGHEGLVKGALGFACNWGTRSSHPLPPDIVVKLIKDNGFNKVKL 60

Query: 61  FEADPGALQALGNSGLQVMLGIPNEFLAPLASSVRVAENWVAKNVSYFISNFGTNI 114
           FEADPGALQALGNSGLQVMLGIPNEFLAPL+S+VRVAE WVAKNVSYF+SNFGT+I
Sbjct: 61  FEADPGALQALGNSGLQVMLGIPNEFLAPLSSTVRVAEEWVAKNVSYFVSNFGTDI 114

[Close]
BLAST of CsGy5G018820 vs. TAIR10
Match: AT5G20870.1 (O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 145.6 bits (366), Expect = 1.9e-35
Identity = 69/108 (63.89%), Postives = 89/108 (82.41%), Query Frame = 0 

Query: 12  LVVCCLS------LVKSGFGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEADPGAL 71
           L++ CLS      ++K+  G ACNWGT++SHPLPP+IVVKL++DNGFNKVKLFEADPGAL
Sbjct: 10  LILFCLSIFFLQNILKNVEGLACNWGTQASHPLPPNIVVKLLRDNGFNKVKLFEADPGAL 69

Query: 72  QALGNSGLQVMLGIPNEFLAPLASSVRVAENWVAKNVSYFISNFGTNI 114
           +ALG SG+QVM+GIPN+ LA +AS+V  AE WV +NVS +IS +GT+I
Sbjct: 70  RALGKSGIQVMVGIPNDLLATMASTVTNAELWVQQNVSQYISRYGTDI 117

[Close]
BLAST of CsGy5G018820 vs. TAIR10
Match: AT5G58090.1 (O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 129.8 bits (325), Expect = 1.1e-30
Identity = 60/107 (56.07%), Postives = 79/107 (73.83%), Query Frame = 0 

Query: 7   WGSLLLVVCCLSLVKSGFGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEADPGALQ 66
           WGS+LL++    L +       NWGT++SHPLPPDIVV+++++NG  KVKLF+A+   L+
Sbjct: 3   WGSVLLLLAVALLCQRASSIGANWGTQASHPLPPDIVVRMLRENGIQKVKLFDAEYDTLR 62

Query: 67  ALGNSGLQVMLGIPNEFLAPLASSVRVAENWVAKNVSYFISNFGTNI 114
           ALG SG++VM+GIPNE LA LASS++ AE WVAKNVS  IS    NI
Sbjct: 63  ALGKSGIEVMVGIPNEMLATLASSLKAAEKWVAKNVSTHISTDNVNI 109

[Close]
BLAST of CsGy5G018820 vs. TAIR10
Match: AT4G31140.1 (O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 112.5 bits (280), Expect = 1.8e-25
Identity = 50/89 (56.18%), Postives = 67/89 (75.28%), Query Frame = 0 

Query: 25  GFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEADPGALQALGNSGLQVMLGIPNEFL 84
           G   NWG+++ HPLPP  VV+L+++NG  KVKLFEAD   L+AL  +G+QVM+GIPN+ L
Sbjct: 26  GIGVNWGSQARHPLPPATVVRLLRENGIQKVKLFEADSAILKALSRTGIQVMVGIPNDLL 85

Query: 85  APLASSVRVAENWVAKNVSYFISNFGTNI 114
           APLA SV  AE WV++NVS  +S+ G +I
Sbjct: 86  APLAGSVAAAERWVSQNVSAHVSSNGVDI 114

[Close]
BLAST of CsGy5G018820 vs. TAIR10
Match: AT5G64790.1 (O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 100.9 bits (250), Expect = 5.4e-22
Identity = 48/106 (45.28%), Postives = 71/106 (66.98%), Query Frame = 0 

Query: 8   GSLLLVVCCLSLVKSGFGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEADPGALQA 67
           G++++ V  L+ +  GFG   NWG  +SHPL P+IVV+++KDN  NKVKLF+AD   + A
Sbjct: 12  GTVIMTVLTLASLVGGFG--VNWGNIASHPLNPNIVVQMLKDNKINKVKLFDADSWTMNA 71

Query: 68  LGNSGLQVMLGIPNEFLAPLASSVRVAENWVAKNVSYFISNFGTNI 114
           L  +G++VM+GIPN  L  LA     A++WV +NV+ +I   G +I
Sbjct: 72  LAGTGMEVMVGIPNNLLESLADDYDNAKDWVKENVTQYIRKGGVDI 115

[Close]
BLAST of CsGy5G018820 vs. TAIR10
Match: AT3G24330.1 (O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 95.9 bits (237), Expect = 1.7e-20
Identity = 47/103 (45.63%), Postives = 64/103 (62.14%), Query Frame = 0 

Query: 12  LVVCCLSLVKSG-FGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEADPGALQALGN 71
           L++  +S+  S       NWG  +SH LPP+ VVK++ DN F K+KLFEAD   L AL  
Sbjct: 24  LIISQVSIASSNTSNVGVNWGIMASHQLPPEKVVKMLMDNSFTKLKLFEADQNILDALIG 83

Query: 72  SGLQVMLGIPNEFLAPLASSVRVAENWVAKNVSYFISNFGTNI 114
           S ++VM+GIPN FL  +A    VA +WV +NV+ +  N G NI
Sbjct: 84  SDIEVMIGIPNRFLKEMAQDTSVAASWVEENVTAYSYNGGVNI 126

[Close]
BLAST of CsGy5G018820 vs. Swiss-Prot
Match: sp|Q93Z08|E136_ARATH (Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis thaliana OX=3702 GN=At5g58090 PE=2 SV=2)

HSP 1 Score: 129.8 bits (325), Expect = 1.9e-29
Identity = 60/107 (56.07%), Postives = 79/107 (73.83%), Query Frame = 0 

Query: 7   WGSLLLVVCCLSLVKSGFGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEADPGALQ 66
           WGS+LL++    L +       NWGT++SHPLPPDIVV+++++NG  KVKLF+A+   L+
Sbjct: 3   WGSVLLLLAVALLCQRASSIGANWGTQASHPLPPDIVVRMLRENGIQKVKLFDAEYDTLR 62

Query: 67  ALGNSGLQVMLGIPNEFLAPLASSVRVAENWVAKNVSYFISNFGTNI 114
           ALG SG++VM+GIPNE LA LASS++ AE WVAKNVS  IS    NI
Sbjct: 63  ALGKSGIEVMVGIPNEMLATLASSLKAAEKWVAKNVSTHISTDNVNI 109

[Close]
BLAST of CsGy5G018820 vs. Swiss-Prot
Match: sp|Q9M088|E135_ARATH (Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis thaliana OX=3702 GN=At4g31140 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.2e-24
Identity = 50/89 (56.18%), Postives = 67/89 (75.28%), Query Frame = 0 

Query: 25  GFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEADPGALQALGNSGLQVMLGIPNEFL 84
           G   NWG+++ HPLPP  VV+L+++NG  KVKLFEAD   L+AL  +G+QVM+GIPN+ L
Sbjct: 26  GIGVNWGSQARHPLPPATVVRLLRENGIQKVKLFEADSAILKALSRTGIQVMVGIPNDLL 85

Query: 85  APLASSVRVAENWVAKNVSYFISNFGTNI 114
           APLA SV  AE WV++NVS  +S+ G +I
Sbjct: 86  APLAGSVAAAERWVSQNVSAHVSSNGVDI 114

[Close]
BLAST of CsGy5G018820 vs. Swiss-Prot
Match: sp|Q9FGH4|E139_ARATH (Glucan endo-1,3-beta-glucosidase 9 OS=Arabidopsis thaliana OX=3702 GN=At5g58480 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 6.9e-19
Identity = 50/104 (48.08%), Postives = 66/104 (63.46%), Query Frame = 0 

Query: 5   KLWGSLLLVVCCLSLVKSGF-GFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEADPG 64
           +L+  LL V   LSL  +       NWGT +SHPLPP  VV+L+K NG  KVKLF+ADP 
Sbjct: 4   RLFLLLLAVTAGLSLTGTTVRAVGINWGTEASHPLPPSKVVELLKSNGIVKVKLFDADPK 63

Query: 65  ALQALGNSGLQVMLGIPNEFLAPLASSVRVAENWVAKNVSYFIS 108
            L+AL  S + V +GI N  L  L +SV+VAE+WV  NV+ + +
Sbjct: 64  VLRALSGSNIGVTIGIQNSMLKSLNASVKVAESWVHDNVTRYFN 107

[Close]
BLAST of CsGy5G018820 vs. Swiss-Prot
Match: sp|Q6NKW9|E138_ARATH (Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis thaliana OX=3702 GN=At1g64760 PE=2 SV=2)

HSP 1 Score: 92.0 bits (227), Expect = 4.5e-18
Identity = 47/104 (45.19%), Postives = 70/104 (67.31%), Query Frame = 0 

Query: 11  LLVVCCLSLVKSGFGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEADPGALQALGN 70
           ++V+  L ++ +G G   NWGT ++H LPP  VV+++KDN  NKVKLF+AD   + AL  
Sbjct: 12  VIVIGHLGILVNGLG--VNWGTMATHKLPPKTVVQMLKDNNINKVKLFDADETTMGALAG 71

Query: 71  SGLQVMLGIPNEFLAPLASSVRVAENWVAKNVSYFISNFGTNIS 115
           SGL+VM+ IPN+ L  + S  R A++WV KNV+ +  + G NI+
Sbjct: 72  SGLEVMVAIPNDQLKVMTSYDR-AKDWVRKNVTRYNFDGGVNIT 112

[Close]
BLAST of CsGy5G018820 vs. Swiss-Prot
Match: sp|Q9FHX5|E1310_ARATH (Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis thaliana OX=3702 GN=At5g42100 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.4e-11
Identity = 36/103 (34.95%), Postives = 61/103 (59.22%), Query Frame = 0 

Query: 6   LWGSLLLVVCCLSLVKSGFGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEADPGAL 65
           L+    L +  L L+ S  G   N+G  +++  PP  V+ L+K  G  KVKL++ADP AL
Sbjct: 9   LFSLFCLALFSLPLIVSSIGI--NYGQVANNLPPPKNVIPLLKSVGATKVKLYDADPQAL 68

Query: 66  QALGNSGLQVMLGIPNEFLAPLASSVRVAENWVAKNVSYFISN 109
           +A   SG ++ + + NE+LA ++  ++ A+ WV +NV  ++ N
Sbjct: 69  RAFAGSGFELTVALGNEYLAQMSDPIK-AQGWVKENVQAYLPN 108

[Close]
BLAST of CsGy5G018820 vs. TrEMBL
Match: tr|A0A0A0KPC5|A0A0A0KPC5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G561790 PE=3 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 7.9e-60
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MGHPKLWGSLLLVVCCLSLVKSGFGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEA 60
           MGHPKLWGSLLLVVCCLSLVKSGFGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEA
Sbjct: 1   MGHPKLWGSLLLVVCCLSLVKSGFGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEA 60

Query: 61  DPGALQALGNSGLQVMLGIPNEFLAPLASSVRVAENWVAKNVSYFISNFGTNI 114
           DPGALQALGNSGLQVMLGIPNEFLAPLASSVRVAENWVAKNVSYFISNFGTNI
Sbjct: 61  DPGALQALGNSGLQVMLGIPNEFLAPLASSVRVAENWVAKNVSYFISNFGTNI 113

[Close]
BLAST of CsGy5G018820 vs. TrEMBL
Match: tr|A0A1S3CTV6|A0A1S3CTV6_CUCME (glucan endo-1,3-beta-glucosidase 6 OS=Cucumis melo OX=3656 GN=LOC103504444 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 9.9e-55
Identity = 105/113 (92.92%), Postives = 107/113 (94.69%), Query Frame = 0 

Query: 1   MGHPKLWGSLLLVVCCLSLVKSGFGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEA 60
           MG  KLWGSLLLVVCCL  VK G+GFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEA
Sbjct: 1   MGRSKLWGSLLLVVCCLLFVKGGWGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEA 60

Query: 61  DPGALQALGNSGLQVMLGIPNEFLAPLASSVRVAENWVAKNVSYFISNFGTNI 114
           DPGALQALGNSGLQVMLGIPNEFLA LASSVRVAENWVAKNVSYF+SNFGTNI
Sbjct: 61  DPGALQALGNSGLQVMLGIPNEFLASLASSVRVAENWVAKNVSYFVSNFGTNI 113

[Close]
BLAST of CsGy5G018820 vs. TrEMBL
Match: tr|E5GB65|E5GB65_CUCME (Glucan endo-13-beta-glucosidase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 9.9e-55
Identity = 105/113 (92.92%), Postives = 107/113 (94.69%), Query Frame = 0 

Query: 1   MGHPKLWGSLLLVVCCLSLVKSGFGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEA 60
           MG  KLWGSLLLVVCCL  VK G+GFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEA
Sbjct: 1   MGRSKLWGSLLLVVCCLLFVKGGWGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEA 60

Query: 61  DPGALQALGNSGLQVMLGIPNEFLAPLASSVRVAENWVAKNVSYFISNFGTNI 114
           DPGALQALGNSGLQVMLGIPNEFLA LASSVRVAENWVAKNVSYF+SNFGTNI
Sbjct: 61  DPGALQALGNSGLQVMLGIPNEFLASLASSVRVAENWVAKNVSYFVSNFGTNI 113

[Close]
BLAST of CsGy5G018820 vs. TrEMBL
Match: tr|E5GCF6|E5GCF6_CUCME (Glucan endo-13-beta-glucosidase (Fragment) OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 3.5e-44
Identity = 88/91 (96.70%), Postives = 90/91 (98.90%), Query Frame = 0 

Query: 23  GFGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEADPGALQALGNSGLQVMLGIPNE 82
           G+GFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEADPGALQALGNSGLQVMLGIPNE
Sbjct: 2   GWGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEADPGALQALGNSGLQVMLGIPNE 61

Query: 83  FLAPLASSVRVAENWVAKNVSYFISNFGTNI 114
           FLA LASSVRVAENWVAKNVSYF+SNFGTNI
Sbjct: 62  FLASLASSVRVAENWVAKNVSYFVSNFGTNI 92

[Close]
BLAST of CsGy5G018820 vs. TrEMBL
Match: tr|A0A2I4EXE6|A0A2I4EXE6_9ROSI (glucan endo-1,3-beta-glucosidase 5-like OS=Juglans regia OX=51240 GN=LOC108993562 PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 7.2e-37
Identity = 75/94 (79.79%), Postives = 85/94 (90.43%), Query Frame = 0 

Query: 20  VKSGFGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEADPGALQALGNSGLQVMLGI 79
           +K   G ACNWGTRS+HPL P+IVVKL+KDNGFNKVKLFEADPGAL+ALG SG+QVMLGI
Sbjct: 25  IKGVLGLACNWGTRSTHPLSPNIVVKLLKDNGFNKVKLFEADPGALKALGKSGIQVMLGI 84

Query: 80  PNEFLAPLASSVRVAENWVAKNVSYFISNFGTNI 114
           PNEFLAPLASSVRVAE WVA+NVS F+S+FG +I
Sbjct: 85  PNEFLAPLASSVRVAEEWVARNVSSFVSSFGVDI 118

The following BLAST results are available for this feature:
BLAST of CsGy5G018820 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004150617.11.2e-59100.00PREDICTED: glucan endo-1,3-beta-glucosidase 6 [Cucumis sativus] >XP_011655450.1 ... [more]
XP_008467025.11.5e-5492.92PREDICTED: glucan endo-1,3-beta-glucosidase 6 [Cucumis melo] >ADN33707.1 glucan ... [more]
XP_022146364.12.0e-4680.34glucan endo-1,3-beta-glucosidase 5-like [Momordica charantia][more]
XP_022953659.12.6e-4682.76glucan endo-1,3-beta-glucosidase 5-like [Cucurbita moschata][more]
XP_023540642.12.6e-4682.76glucan endo-1,3-beta-glucosidase 6-like [Cucurbita pepo subsp. pepo][more]
BLAST of CsGy5G018820 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G20870.11.9e-3563.89O-Glycosyl hydrolases family 17 protein[more]
AT5G58090.11.1e-3056.07O-Glycosyl hydrolases family 17 protein[more]
AT4G31140.11.8e-2556.18O-Glycosyl hydrolases family 17 protein[more]
AT5G64790.15.4e-2245.28O-Glycosyl hydrolases family 17 protein[more]
AT3G24330.11.7e-2045.63O-Glycosyl hydrolases family 17 protein[more]
BLAST of CsGy5G018820 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q93Z08|E136_ARATH1.9e-2956.07Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis thaliana OX=3702 GN=At5g58090 ... [more]
sp|Q9M088|E135_ARATH3.2e-2456.18Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis thaliana OX=3702 GN=At4g31140 ... [more]
sp|Q9FGH4|E139_ARATH6.9e-1948.08Glucan endo-1,3-beta-glucosidase 9 OS=Arabidopsis thaliana OX=3702 GN=At5g58480 ... [more]
sp|Q6NKW9|E138_ARATH4.5e-1845.19Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis thaliana OX=3702 GN=At1g64760 ... [more]
sp|Q9FHX5|E1310_ARATH2.4e-1134.95Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis thaliana OX=3702 GN=At5g42100... [more]
BLAST of CsGy5G018820 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KPC5|A0A0A0KPC5_CUCSA7.9e-60100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G561790 PE=3 SV=1[more]
tr|A0A1S3CTV6|A0A1S3CTV6_CUCME9.9e-5592.92glucan endo-1,3-beta-glucosidase 6 OS=Cucumis melo OX=3656 GN=LOC103504444 PE=3 ... [more]
tr|E5GB65|E5GB65_CUCME9.9e-5592.92Glucan endo-13-beta-glucosidase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1[more]
tr|E5GCF6|E5GCF6_CUCME3.5e-4496.70Glucan endo-13-beta-glucosidase (Fragment) OS=Cucumis melo subsp. melo OX=412675... [more]
tr|A0A2I4EXE6|A0A2I4EXE6_9ROSI7.2e-3779.79glucan endo-1,3-beta-glucosidase 5-like OS=Juglans regia OX=51240 GN=LOC10899356... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR017853Glycoside_hydrolase_SF
IPR000490Glyco_hydro_17
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G018820.1CsGy5G018820.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000490Glycoside hydrolase family 17PFAMPF00332Glyco_hydro_17coord: 27..107
e-value: 7.4E-12
score: 45.2
NoneNo IPR availableGENE3DG3DSA:3.20.20.80coord: 27..115
e-value: 3.7E-22
score: 80.7
NoneNo IPR availablePANTHERPTHR32227:SF59O-GLYCOSYL HYDROLASES FAMILY 17 PROTEINcoord: 12..113
NoneNo IPR availablePANTHERPTHR32227FAMILY NOT NAMEDcoord: 12..113
NoneNo IPR availablePRODOMPD010978coord: 36..97
e-value: 0.002
score: 91.0
IPR017853Glycoside hydrolase superfamilySUPERFAMILYSSF51445(Trans)glycosidasescoord: 28..107

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy5G018820Cp4.1LG01g18280Cucurbita pepo (Zucchini)cgybcpeB651
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy5G018820Watermelon (97103) v2cgybwmbB323
CsGy5G018820Watermelon (97103) v2cgybwmbB327
CsGy5G018820Wax gourdcgybwgoB418
CsGy5G018820Wax gourdcgybwgoB426
CsGy5G018820Silver-seed gourdcarcgybB0941
CsGy5G018820Cucurbita maxima (Rimu)cgybcmaB611
CsGy5G018820Cucurbita maxima (Rimu)cgybcmaB656
CsGy5G018820Cucurbita maxima (Rimu)cgybcmaB678
CsGy5G018820Cucurbita moschata (Rifu)cgybcmoB586
CsGy5G018820Cucurbita moschata (Rifu)cgybcmoB633
CsGy5G018820Cucurbita moschata (Rifu)cgybcmoB656
CsGy5G018820Cucurbita pepo (Zucchini)cgybcpeB600
CsGy5G018820Cucurbita pepo (Zucchini)cgybcpeB634
CsGy5G018820Cucumber (Chinese Long) v2cgybcuB223
CsGy5G018820Cucumber (Chinese Long) v2cgybcuB229
CsGy5G018820Bottle gourd (USVL1VR-Ls)cgyblsiB299
CsGy5G018820Bottle gourd (USVL1VR-Ls)cgyblsiB301
CsGy5G018820Melon (DHL92) v3.5.1cgybmeB293
CsGy5G018820Melon (DHL92) v3.5.1cgybmeB308
CsGy5G018820Melon (DHL92) v3.6.1cgybmedB293
CsGy5G018820Watermelon (Charleston Gray)cgybwcgB336
CsGy5G018820Watermelon (Charleston Gray)cgybwcgB340
CsGy5G018820Watermelon (97103) v1cgybwmB386
CsGy5G018820Watermelon (97103) v1cgybwmB389
CsGy5G018820Wild cucumber (PI 183967)cgybcpiB225
CsGy5G018820Silver-seed gourdcarcgybB0436
CsGy5G018820Silver-seed gourdcarcgybB0435
CsGy5G018820Silver-seed gourdcarcgybB0867
CsGy5G018820Cucumber (Chinese Long) v3cgybcucB232