Cp4.1LG01g18280 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g18280
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionGlucan endo-1,3-beta-glucosidase, putative
LocationCp4.1LG01 : 15549159 .. 15550531 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTGGCAATACGTGTAAATGTTTTCAAGGAACCCAATTCCTTTTCGAATCTCCATGCAATTCCTTGCCTTTCCTTGCCCAAAAGGCCTCGTCTTCTCTTAACTTTTAGAATTTTGGTCATTACATTTAAAATGCCATCTCCAAAGATGCAAACTCAACACACAAAATGGGACACCCATGCCTATTGTTTTTGCTAATTGTTTCTTGTTTGGGCCATGAAGGTCTTGTAAAGGGTGCTTTAGGGTTTGCGTGTAATTGGGGAACCCGCTCCAGCCATCCACTCCCACCAGATATTGTTGTCAAGTTGATTAAGGATAATGGGTTCAATAAAGTGAAGCTATTTGAAGCTGATCCTGGAGCCCTTCAAGCTTTGGGAAATTCTGGTCTTCAAGTTATGCTTGGAATCCCTAATGAATTTTTGGCACCGCTTTCAAGTACTGTCCGAGTTGCTGAGGAATGGGTCGCCAAAAACGTGTCTTACTTCGTTTCAAATTTTGGTACAGATATCAGGTAATGGCTTTAATTAGTACCTTGTGATATTATTTCGGTTAATGTTGATATTGTTAGAATGCCTTGTGACAATGGAGATAGTATTCCTTGAATATAAACTCATGATCATTTTTTAAATTAGCCGATGTGCAACTTTCATCCAACACCTCTCCTTGAACAAAGTATGTCCCCTTAATCGAGGCTCGACTCTTTTTTTTTTTTTTTTTTTGNAGTCACTTTTTGACTATGCCTTCGAGGCTCACAACACTTTGTTCGACATTTGAGGATTCTAATGTCATGTTAGAAATCATCGATCTCCACAATGGTATCATATTGTCTACTTTGAACATAAGCTCTCTTGGCTTTGAGTTGGGCTTCCTCAACATGGAGATAGTATTCTATATAATGACTCTGATACCATGTTAGAAATCACGGATCTCTACAATGGTATCACATTGTCCACTATGAGCATAAGCTCTCACGGCGGCTTCCTCAAAAGGCCTCACTACAATACTGTGTTAGGAATCACGGATCTCTACAATTGTATCATATTGTCCACTTTAAGCATCATGACTTTGAGTTGGGCTTCCTCAAAATGCCTCATGCCAATGGAAATAGTATTATTTGATTATAAGCGCATGATCATTCCTTAAATTAGTTCACGTGGGACTTTCATCCAACAAATATTAGGGTGTCAGGAACTAAATTTGCATATGGGTTCGATTGCGTAGGTATGTGGCAGTGGGTAATGAACCTTTCCTAAACGCCTACAACGGTTCATTTCTTCAAACCACGTTCCCAGCTATGCAAAACGTACAAGCCGCCCTAATAAAAGCCGGTTTGGGTCGACAAGTGAAAGTCACAGTCCCATTAAACGCCGA

mRNA sequence

ATGGATGCAAACTCAACACACAAAATGGGACACCCATGCCTATTGTTTTTGCTAATTGTTTCTTGTTTGGGCCATGAAGGTCTTGTAAAGGGTGCTTTAGGGTTTGCGTGTAATTGGGGAACCCGCTCCAGCCATCCACTCCCACCAGATATTGTTGTCAAGTTGATTAAGGATAATGGGTTCAATAAAGTGAAGCTATTTGAAGCTGATCCTGGAGCCCTTCAAGCTTTGGGAAATTCTGGTCTTCAAGTTATGCTTGGAATCCCTAATGAATTTTTGGCACCGCTTTCAAGTACTGTCCGAGTTGCTGAGGAATGGGTCGCCAAAAACGTGTCTTACTTCGTTTCAAATTTTGGTACAGATATCAGCTATGCAAAACGTACAAGCCGCCCTAATAAAAGCCGGTTTGGGTCGACAAGTGAAAGTCACAGTCCCATTAAACGCCGA

Coding sequence (CDS)

ATGGATGCAAACTCAACACACAAAATGGGACACCCATGCCTATTGTTTTTGCTAATTGTTTCTTGTTTGGGCCATGAAGGTCTTGTAAAGGGTGCTTTAGGGTTTGCGTGTAATTGGGGAACCCGCTCCAGCCATCCACTCCCACCAGATATTGTTGTCAAGTTGATTAAGGATAATGGGTTCAATAAAGTGAAGCTATTTGAAGCTGATCCTGGAGCCCTTCAAGCTTTGGGAAATTCTGGTCTTCAAGTTATGCTTGGAATCCCTAATGAATTTTTGGCACCGCTTTCAAGTACTGTCCGAGTTGCTGAGGAATGGGTCGCCAAAAACGTGTCTTACTTCGTTTCAAATTTTGGTACAGATATCAGCTATGCAAAACGTACAAGCCGCCCTAATAAAAGCCGGTTTGGGTCGACAAGTGAAAGTCACAGTCCCATTAAACGCCGA

Protein sequence

MDANSTHKMGHPCLLFLLIVSCLGHEGLVKGALGFACNWGTRSSHPLPPDIVVKLIKDNGFNKVKLFEADPGALQALGNSGLQVMLGIPNEFLAPLSSTVRVAEEWVAKNVSYFVSNFGTDISYAKRTSRPNKSRFGSTSESHSPIKRR
Homology
[Close]
BLAST of Cp4.1LG01g18280 vs. Swiss-Prot
Match: E136_ARATH (Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis thaliana GN=At5g58090 PE=1 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 6.8e-27
Identity = 62/131 (47.33%), Postives = 87/131 (66.41%), Query Frame = 1 

Query: 9   MGHPCLLFLLIVSCLGHEGLVKGALGFACNWGTRSSHPLPPDIVVKLIKDNGFNKVKLFE 68
           MG   +L LL V+ L       GA     NWGT++SHPLPPDIVV+++++NG  KVKLF+
Sbjct: 1   MGWGSVLLLLAVALLCQRASSIGA-----NWGTQASHPLPPDIVVRMLRENGIQKVKLFD 60

Query: 69  ADPGALQALGNSGLQVMLGIPNEFLAPLSSTVRVAEEWVAKNVSYFVSNFGTDISYAKRT 128
           A+   L+ALG SG++VM+GIPNE LA L+S+++ AE+WVAKNVS  +S    +I Y    
Sbjct: 61  AEYDTLRALGKSGIEVMVGIPNEMLATLASSLKAAEKWVAKNVSTHISTDNVNIRYVAVG 120

Query: 129 SRPNKSRFGST 140
           + P  S +  +
Sbjct: 121 NEPFLSTYNGS 126

[Close]
BLAST of Cp4.1LG01g18280 vs. Swiss-Prot
Match: E135_ARATH (Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis thaliana GN=At4g31140 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-25
Identity = 55/108 (50.93%), Postives = 73/108 (67.59%), Query Frame = 1 

Query: 34  GFACNWGTRSSHPLPPDIVVKLIKDNGFNKVKLFEADPGALQALGNSGLQVMLGIPNEFL 93
           G   NWG+++ HPLPP  VV+L+++NG  KVKLFEAD   L+AL  +G+QVM+GIPN+ L
Sbjct: 26  GIGVNWGSQARHPLPPATVVRLLRENGIQKVKLFEADSAILKALSRTGIQVMVGIPNDLL 85

Query: 94  APLSSTVRVAEEWVAKNVSYFVSNFGTDISYAKRTSRPNKSRFGSTSE 142
           APL+ +V  AE WV++NVS  VS+ G DI Y    + P    F  T E
Sbjct: 86  APLAGSVAAAERWVSQNVSAHVSSNGVDIRYVAVGNEPFLKAFNGTFE 133

[Close]
BLAST of Cp4.1LG01g18280 vs. Swiss-Prot
Match: E139_ARATH (Glucan endo-1,3-beta-glucosidase 9 OS=Arabidopsis thaliana GN=At5g58480 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.0e-19
Identity = 55/126 (43.65%), Postives = 72/126 (57.14%), Query Frame = 1 

Query: 14  LLFLLIVSCLGHEGLVKGALGFACNWGTRSSHPLPPDIVVKLIKDNGFNKVKLFEADPGA 73
           LL L + + L   G    A+G   NWGT +SHPLPP  VV+L+K NG  KVKLF+ADP  
Sbjct: 7   LLLLAVTAGLSLTGTTVRAVGI--NWGTEASHPLPPSKVVELLKSNGIVKVKLFDADPKV 66

Query: 74  LQALGNSGLQVMLGIPNEFLAPLSSTVRVAEEWVAKNVS-YFVSNFGTDISYAKRTSRPN 133
           L+AL  S + V +GI N  L  L+++V+VAE WV  NV+ YF       I Y      P 
Sbjct: 67  LRALSGSNIGVTIGIQNSMLKSLNASVKVAESWVHDNVTRYFNGGNRVRIEYVAVGEEPF 126

Query: 134 KSRFGS 139
              +G+
Sbjct: 127 LQSYGN 130

[Close]
BLAST of Cp4.1LG01g18280 vs. Swiss-Prot
Match: E138_ARATH (Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis thaliana GN=At1g64760 PE=1 SV=2)

HSP 1 Score: 96.7 bits (239), Expect = 2.3e-19
Identity = 52/120 (43.33%), Postives = 78/120 (65.00%), Query Frame = 1 

Query: 14  LLFLLI--VSCLGHEGLVKGALGFACNWGTRSSHPLPPDIVVKLIKDNGFNKVKLFEADP 73
           LL L++  V  +GH G++   LG   NWGT ++H LPP  VV+++KDN  NKVKLF+AD 
Sbjct: 4   LLALVVGFVIVIGHLGILVNGLGV--NWGTMATHKLPPKTVVQMLKDNNINKVKLFDADE 63

Query: 74  GALQALGNSGLQVMLGIPNEFLAPLSSTVRVAEEWVAKNVSYFVSNFGTDISYAKRTSRP 132
             + AL  SGL+VM+ IPN+ L  ++S  R A++WV KNV+ +  + G +I++    + P
Sbjct: 64  TTMGALAGSGLEVMVAIPNDQLKVMTSYDR-AKDWVRKNVTRYNFDGGVNITFVAVGNEP 120

[Close]
BLAST of Cp4.1LG01g18280 vs. Swiss-Prot
Match: E1310_ARATH (Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis thaliana GN=At5g42100 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.2e-11
Identity = 37/103 (35.92%), Postives = 61/103 (59.22%), Query Frame = 1 

Query: 15  LFLLIVSCLGHEGLVKGALGFACNWGTRSSHPLPPDIVVKLIKDNGFNKVKLFEADPGAL 74
           LF L    L    L+  ++G   N+G  +++  PP  V+ L+K  G  KVKL++ADP AL
Sbjct: 9   LFSLFCLALFSLPLIVSSIGI--NYGQVANNLPPPKNVIPLLKSVGATKVKLYDADPQAL 68

Query: 75  QALGNSGLQVMLGIPNEFLAPLSSTVRVAEEWVAKNVSYFVSN 118
           +A   SG ++ + + NE+LA +S  ++ A+ WV +NV  ++ N
Sbjct: 69  RAFAGSGFELTVALGNEYLAQMSDPIK-AQGWVKENVQAYLPN 108

[Close]
BLAST of Cp4.1LG01g18280 vs. TrEMBL
Match: A0A0A0KPC5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G561790 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 9.1e-47
Identity = 102/140 (72.86%), Postives = 112/140 (80.00%), Query Frame = 1 

Query: 9   MGHPCLL--FLLIVSCLGHEGLVKGALGFACNWGTRSSHPLPPDIVVKLIKDNGFNKVKL 68
           MGHP L    LL+V CL    LVK   GFACNWGTRSSHPLPPDIVVKL+KDNGFNKVKL
Sbjct: 1   MGHPKLWGSLLLVVCCLS---LVKSGFGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKL 60

Query: 69  FEADPGALQALGNSGLQVMLGIPNEFLAPLSSTVRVAEEWVAKNVSYFVSNFGTDISYAK 128
           FEADPGALQALGNSGLQVMLGIPNEFLAPL+S+VRVAE WVAKNVSYF+SNFGT+I Y  
Sbjct: 61  FEADPGALQALGNSGLQVMLGIPNEFLAPLASSVRVAENWVAKNVSYFISNFGTNIRYVA 120

Query: 129 RTSRPNKSRF-GSTSESHSP 146
             + P  + + GS  +S  P
Sbjct: 121 VGNEPFLNAYNGSFLQSTFP 137

[Close]
BLAST of Cp4.1LG01g18280 vs. TrEMBL
Match: E5GB65_CUCME (Glucan endo-13-beta-glucosidase OS=Cucumis melo subsp. melo PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 4.2e-44
Identity = 97/130 (74.62%), Postives = 106/130 (81.54%), Query Frame = 1 

Query: 17  LLIVSCLGHEGLVKGALGFACNWGTRSSHPLPPDIVVKLIKDNGFNKVKLFEADPGALQA 76
           LL+V CL     VKG  GFACNWGTRSSHPLPPDIVVKL+KDNGFNKVKLFEADPGALQA
Sbjct: 11  LLVVCCLL---FVKGGWGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEADPGALQA 70

Query: 77  LGNSGLQVMLGIPNEFLAPLSSTVRVAEEWVAKNVSYFVSNFGTDISYAKRTSRPNKSRF 136
           LGNSGLQVMLGIPNEFLA L+S+VRVAE WVAKNVSYFVSNFGT+I Y    + P  + +
Sbjct: 71  LGNSGLQVMLGIPNEFLASLASSVRVAENWVAKNVSYFVSNFGTNIRYVAVGNEPFLNAY 130

Query: 137 -GSTSESHSP 146
            GS  +S  P
Sbjct: 131 NGSFLQSTFP 137

[Close]
BLAST of Cp4.1LG01g18280 vs. TrEMBL
Match: E5GCF6_CUCME (Glucan endo-13-beta-glucosidase (Fragment) OS=Cucumis melo subsp. melo PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.0e-42
Identity = 90/116 (77.59%), Postives = 98/116 (84.48%), Query Frame = 1 

Query: 31  GALGFACNWGTRSSHPLPPDIVVKLIKDNGFNKVKLFEADPGALQALGNSGLQVMLGIPN 90
           G  GFACNWGTRSSHPLPPDIVVKL+KDNGFNKVKLFEADPGALQALGNSGLQVMLGIPN
Sbjct: 1   GGWGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEADPGALQALGNSGLQVMLGIPN 60

Query: 91  EFLAPLSSTVRVAEEWVAKNVSYFVSNFGTDISYAKRTSRPNKSRF-GSTSESHSP 146
           EFLA L+S+VRVAE WVAKNVSYFVSNFGT+I Y    + P  + + GS  +S  P
Sbjct: 61  EFLASLASSVRVAENWVAKNVSYFVSNFGTNIRYVAVGNEPFLNAYNGSFLQSTFP 116

[Close]
BLAST of Cp4.1LG01g18280 vs. TrEMBL
Match: M5VPH3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004643mg PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 5.9e-38
Identity = 83/126 (65.87%), Postives = 97/126 (76.98%), Query Frame = 1 

Query: 9   MGHPCLLFLLIVSCLGHEGLVKGALG---FACNWGTRSSHPLPPDIVVKLIKDNGFNKVK 68
           MG  CL  LL+  C+  EGLVK  LG    ACNWGTRS+HPLPP IVVKL+KDNGF+KVK
Sbjct: 1   MGFSCLWVLLL--CIIGEGLVKRVLGVGGLACNWGTRSTHPLPPTIVVKLLKDNGFSKVK 60

Query: 69  LFEADPGALQALGNSGLQVMLGIPNEFLAPLSSTVRVAEEWVAKNVSYFVSNFGTDISYA 128
           LFEADPGALQALG +G+QVM+GIPNE LAPL+S+V VAE WV+KNVS ++S  G DI Y 
Sbjct: 61  LFEADPGALQALGRTGIQVMVGIPNELLAPLASSVTVAENWVSKNVSSYISRNGVDIRYV 120

Query: 129 KRTSRP 132
              + P
Sbjct: 121 AVGNEP 124

[Close]
BLAST of Cp4.1LG01g18280 vs. TrEMBL
Match: A0A0D2V821_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G094500 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.3e-37
Identity = 76/114 (66.67%), Postives = 92/114 (80.70%), Query Frame = 1 

Query: 9   MGHPCLLFLLIVSCLGHEGLVKGALGFACNWGTRSSHPLPPDIVVKLIKDNGFNKVKLFE 68
           MG   L++ L +  LGHEGL KG LG ACNWG +S+HPLPP+IVV+L+KDNGFNKVKLFE
Sbjct: 1   MGQIRLVWFLFLCLLGHEGLAKGVLGLACNWGLQSTHPLPPNIVVRLLKDNGFNKVKLFE 60

Query: 69  ADPGALQALGNSGLQVMLGIPNEFLAPLSSTVRVAEEWVAKNVSYFVSNFGTDI 123
           AD GAL+ALG SG+QVM+GIPN+ LA L+S V  AE WV +NVSY++S  GTDI
Sbjct: 61  ADTGALKALGRSGIQVMVGIPNDMLASLASAVGNAEAWVKQNVSYYISTHGTDI 114

[Close]
BLAST of Cp4.1LG01g18280 vs. TAIR10
Match: AT5G20870.1 (AT5G20870.1 O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 154.1 bits (388), Expect = 6.9e-38
Identity = 73/127 (57.48%), Postives = 95/127 (74.80%), Query Frame = 1 

Query: 5   STHKMGHPCLLFLLIVSCLGHEGLVKGALGFACNWGTRSSHPLPPDIVVKLIKDNGFNKV 64
           S+H      +LF L +  L  + ++K   G ACNWGT++SHPLPP+IVVKL++DNGFNKV
Sbjct: 2   SSHDTYQKLILFCLSIFFL--QNILKNVEGLACNWGTQASHPLPPNIVVKLLRDNGFNKV 61

Query: 65  KLFEADPGALQALGNSGLQVMLGIPNEFLAPLSSTVRVAEEWVAKNVSYFVSNFGTDISY 124
           KLFEADPGAL+ALG SG+QVM+GIPN+ LA ++STV  AE WV +NVS ++S +GTDI Y
Sbjct: 62  KLFEADPGALRALGKSGIQVMVGIPNDLLATMASTVTNAELWVQQNVSQYISRYGTDIRY 121

Query: 125 AKRTSRP 132
               + P
Sbjct: 122 VAVGNEP 126

[Close]
BLAST of Cp4.1LG01g18280 vs. TAIR10
Match: AT5G58090.1 (AT5G58090.1 O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 121.7 bits (304), Expect = 3.8e-28
Identity = 62/131 (47.33%), Postives = 87/131 (66.41%), Query Frame = 1 

Query: 9   MGHPCLLFLLIVSCLGHEGLVKGALGFACNWGTRSSHPLPPDIVVKLIKDNGFNKVKLFE 68
           MG   +L LL V+ L       GA     NWGT++SHPLPPDIVV+++++NG  KVKLF+
Sbjct: 1   MGWGSVLLLLAVALLCQRASSIGA-----NWGTQASHPLPPDIVVRMLRENGIQKVKLFD 60

Query: 69  ADPGALQALGNSGLQVMLGIPNEFLAPLSSTVRVAEEWVAKNVSYFVSNFGTDISYAKRT 128
           A+   L+ALG SG++VM+GIPNE LA L+S+++ AE+WVAKNVS  +S    +I Y    
Sbjct: 61  AEYDTLRALGKSGIEVMVGIPNEMLATLASSLKAAEKWVAKNVSTHISTDNVNIRYVAVG 120

Query: 129 SRPNKSRFGST 140
           + P  S +  +
Sbjct: 121 NEPFLSTYNGS 126

[Close]
BLAST of Cp4.1LG01g18280 vs. TAIR10
Match: AT4G31140.1 (AT4G31140.1 O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 117.5 bits (293), Expect = 7.2e-27
Identity = 55/108 (50.93%), Postives = 73/108 (67.59%), Query Frame = 1 

Query: 34  GFACNWGTRSSHPLPPDIVVKLIKDNGFNKVKLFEADPGALQALGNSGLQVMLGIPNEFL 93
           G   NWG+++ HPLPP  VV+L+++NG  KVKLFEAD   L+AL  +G+QVM+GIPN+ L
Sbjct: 26  GIGVNWGSQARHPLPPATVVRLLRENGIQKVKLFEADSAILKALSRTGIQVMVGIPNDLL 85

Query: 94  APLSSTVRVAEEWVAKNVSYFVSNFGTDISYAKRTSRPNKSRFGSTSE 142
           APL+ +V  AE WV++NVS  VS+ G DI Y    + P    F  T E
Sbjct: 86  APLAGSVAAAERWVSQNVSAHVSSNGVDIRYVAVGNEPFLKAFNGTFE 133

[Close]
BLAST of Cp4.1LG01g18280 vs. TAIR10
Match: AT5G64790.1 (AT5G64790.1 O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 101.3 bits (251), Expect = 5.3e-22
Identity = 46/106 (43.40%), Postives = 67/106 (63.21%), Query Frame = 1 

Query: 34  GFACNWGTRSSHPLPPDIVVKLIKDNGFNKVKLFEADPGALQALGNSGLQVMLGIPNEFL 93
           GF  NWG  +SHPL P+IVV+++KDN  NKVKLF+AD   + AL  +G++VM+GIPN  L
Sbjct: 27  GFGVNWGNIASHPLNPNIVVQMLKDNKINKVKLFDADSWTMNALAGTGMEVMVGIPNNLL 86

Query: 94  APLSSTVRVAEEWVAKNVSYFVSNFGTDISYAKRTSRPNKSRFGST 140
             L+     A++WV +NV+ ++   G DI Y    + P  S +  +
Sbjct: 87  ESLADDYDNAKDWVKENVTQYIRKGGVDIKYVAVGNEPFLSAYNGS 132

[Close]
BLAST of Cp4.1LG01g18280 vs. TAIR10
Match: AT5G58480.1 (AT5G58480.1 O-Glycosyl hydrolases family 17 protein)

HSP 1 Score: 97.8 bits (242), Expect = 5.9e-21
Identity = 55/126 (43.65%), Postives = 72/126 (57.14%), Query Frame = 1 

Query: 14  LLFLLIVSCLGHEGLVKGALGFACNWGTRSSHPLPPDIVVKLIKDNGFNKVKLFEADPGA 73
           LL L + + L   G    A+G   NWGT +SHPLPP  VV+L+K NG  KVKLF+ADP  
Sbjct: 7   LLLLAVTAGLSLTGTTVRAVGI--NWGTEASHPLPPSKVVELLKSNGIVKVKLFDADPKV 66

Query: 74  LQALGNSGLQVMLGIPNEFLAPLSSTVRVAEEWVAKNVS-YFVSNFGTDISYAKRTSRPN 133
           L+AL  S + V +GI N  L  L+++V+VAE WV  NV+ YF       I Y      P 
Sbjct: 67  LRALSGSNIGVTIGIQNSMLKSLNASVKVAESWVHDNVTRYFNGGNRVRIEYVAVGEEPF 126

Query: 134 KSRFGS 139
              +G+
Sbjct: 127 LQSYGN 130

[Close]
BLAST of Cp4.1LG01g18280 vs. NCBI nr
Match: gi|449465803|ref|XP_004150617.1| (PREDICTED: glucan endo-1,3-beta-glucosidase 6 [Cucumis sativus])

HSP 1 Score: 194.5 bits (493), Expect = 1.3e-46
Identity = 102/140 (72.86%), Postives = 112/140 (80.00%), Query Frame = 1 

Query: 9   MGHPCLL--FLLIVSCLGHEGLVKGALGFACNWGTRSSHPLPPDIVVKLIKDNGFNKVKL 68
           MGHP L    LL+V CL    LVK   GFACNWGTRSSHPLPPDIVVKL+KDNGFNKVKL
Sbjct: 1   MGHPKLWGSLLLVVCCLS---LVKSGFGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKL 60

Query: 69  FEADPGALQALGNSGLQVMLGIPNEFLAPLSSTVRVAEEWVAKNVSYFVSNFGTDISYAK 128
           FEADPGALQALGNSGLQVMLGIPNEFLAPL+S+VRVAE WVAKNVSYF+SNFGT+I Y  
Sbjct: 61  FEADPGALQALGNSGLQVMLGIPNEFLAPLASSVRVAENWVAKNVSYFISNFGTNIRYVA 120

Query: 129 RTSRPNKSRF-GSTSESHSP 146
             + P  + + GS  +S  P
Sbjct: 121 VGNEPFLNAYNGSFLQSTFP 137

[Close]
BLAST of Cp4.1LG01g18280 vs. NCBI nr
Match: gi|659072759|ref|XP_008467025.1| (PREDICTED: glucan endo-1,3-beta-glucosidase 6 [Cucumis melo])

HSP 1 Score: 185.7 bits (470), Expect = 6.1e-44
Identity = 97/130 (74.62%), Postives = 106/130 (81.54%), Query Frame = 1 

Query: 17  LLIVSCLGHEGLVKGALGFACNWGTRSSHPLPPDIVVKLIKDNGFNKVKLFEADPGALQA 76
           LL+V CL     VKG  GFACNWGTRSSHPLPPDIVVKL+KDNGFNKVKLFEADPGALQA
Sbjct: 11  LLVVCCLL---FVKGGWGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEADPGALQA 70

Query: 77  LGNSGLQVMLGIPNEFLAPLSSTVRVAEEWVAKNVSYFVSNFGTDISYAKRTSRPNKSRF 136
           LGNSGLQVMLGIPNEFLA L+S+VRVAE WVAKNVSYFVSNFGT+I Y    + P  + +
Sbjct: 71  LGNSGLQVMLGIPNEFLASLASSVRVAENWVAKNVSYFVSNFGTNIRYVAVGNEPFLNAY 130

Query: 137 -GSTSESHSP 146
            GS  +S  P
Sbjct: 131 NGSFLQSTFP 137

[Close]
BLAST of Cp4.1LG01g18280 vs. NCBI nr
Match: gi|307136338|gb|ADN34155.1| (glucan endo-13-beta-glucosidase [Cucumis melo subsp. melo])

HSP 1 Score: 179.1 bits (453), Expect = 5.7e-42
Identity = 90/116 (77.59%), Postives = 98/116 (84.48%), Query Frame = 1 

Query: 31  GALGFACNWGTRSSHPLPPDIVVKLIKDNGFNKVKLFEADPGALQALGNSGLQVMLGIPN 90
           G  GFACNWGTRSSHPLPPDIVVKL+KDNGFNKVKLFEADPGALQALGNSGLQVMLGIPN
Sbjct: 1   GGWGFACNWGTRSSHPLPPDIVVKLMKDNGFNKVKLFEADPGALQALGNSGLQVMLGIPN 60

Query: 91  EFLAPLSSTVRVAEEWVAKNVSYFVSNFGTDISYAKRTSRPNKSRF-GSTSESHSP 146
           EFLA L+S+VRVAE WVAKNVSYFVSNFGT+I Y    + P  + + GS  +S  P
Sbjct: 61  EFLASLASSVRVAENWVAKNVSYFVSNFGTNIRYVAVGNEPFLNAYNGSFLQSTFP 116

[Close]
BLAST of Cp4.1LG01g18280 vs. NCBI nr
Match: gi|595803064|ref|XP_007201955.1| (hypothetical protein PRUPE_ppa004643mg [Prunus persica])

HSP 1 Score: 165.2 bits (417), Expect = 8.5e-38
Identity = 83/126 (65.87%), Postives = 97/126 (76.98%), Query Frame = 1 

Query: 9   MGHPCLLFLLIVSCLGHEGLVKGALG---FACNWGTRSSHPLPPDIVVKLIKDNGFNKVK 68
           MG  CL  LL+  C+  EGLVK  LG    ACNWGTRS+HPLPP IVVKL+KDNGF+KVK
Sbjct: 1   MGFSCLWVLLL--CIIGEGLVKRVLGVGGLACNWGTRSTHPLPPTIVVKLLKDNGFSKVK 60

Query: 69  LFEADPGALQALGNSGLQVMLGIPNEFLAPLSSTVRVAEEWVAKNVSYFVSNFGTDISYA 128
           LFEADPGALQALG +G+QVM+GIPNE LAPL+S+V VAE WV+KNVS ++S  G DI Y 
Sbjct: 61  LFEADPGALQALGRTGIQVMVGIPNELLAPLASSVTVAENWVSKNVSSYISRNGVDIRYV 120

Query: 129 KRTSRP 132
              + P
Sbjct: 121 AVGNEP 124

[Close]
BLAST of Cp4.1LG01g18280 vs. NCBI nr
Match: gi|823240284|ref|XP_012452764.1| (PREDICTED: glucan endo-1,3-beta-glucosidase 5 [Gossypium raimondii])

HSP 1 Score: 164.1 bits (414), Expect = 1.9e-37
Identity = 76/114 (66.67%), Postives = 92/114 (80.70%), Query Frame = 1 

Query: 9   MGHPCLLFLLIVSCLGHEGLVKGALGFACNWGTRSSHPLPPDIVVKLIKDNGFNKVKLFE 68
           MG   L++ L +  LGHEGL KG LG ACNWG +S+HPLPP+IVV+L+KDNGFNKVKLFE
Sbjct: 1   MGQIRLVWFLFLCLLGHEGLAKGVLGLACNWGLQSTHPLPPNIVVRLLKDNGFNKVKLFE 60

Query: 69  ADPGALQALGNSGLQVMLGIPNEFLAPLSSTVRVAEEWVAKNVSYFVSNFGTDI 123
           AD GAL+ALG SG+QVM+GIPN+ LA L+S V  AE WV +NVSY++S  GTDI
Sbjct: 61  ADTGALKALGRSGIQVMVGIPNDMLASLASAVGNAEAWVKQNVSYYISTHGTDI 114

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g18280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
E136_ARATH6.8e-2747.33Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis thaliana GN=At5g58090 PE=1 SV=... [more]
E135_ARATH1.3e-2550.93Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis thaliana GN=At4g31140 PE=1 SV=... [more]
E139_ARATH1.0e-1943.65Glucan endo-1,3-beta-glucosidase 9 OS=Arabidopsis thaliana GN=At5g58480 PE=1 SV=... [more]
E138_ARATH2.3e-1943.33Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis thaliana GN=At1g64760 PE=1 SV=... [more]
E1310_ARATH5.2e-1135.92Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis thaliana GN=At5g42100 PE=1 SV... [more]
BLAST of Cp4.1LG01g18280 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPC5_CUCSA9.1e-4772.86Uncharacterized protein OS=Cucumis sativus GN=Csa_5G561790 PE=3 SV=1[more]
E5GB65_CUCME4.2e-4474.62Glucan endo-13-beta-glucosidase OS=Cucumis melo subsp. melo PE=3 SV=1[more]
E5GCF6_CUCME4.0e-4277.59Glucan endo-13-beta-glucosidase (Fragment) OS=Cucumis melo subsp. melo PE=3 SV=1[more]
M5VPH3_PRUPE5.9e-3865.87Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004643mg PE=3 SV=1[more]
A0A0D2V821_GOSRA1.3e-3766.67Uncharacterized protein OS=Gossypium raimondii GN=B456_010G094500 PE=3 SV=1[more]
BLAST of Cp4.1LG01g18280 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G20870.16.9e-3857.48 O-Glycosyl hydrolases family 17 protein[more]
AT5G58090.13.8e-2847.33 O-Glycosyl hydrolases family 17 protein[more]
AT4G31140.17.2e-2750.93 O-Glycosyl hydrolases family 17 protein[more]
AT5G64790.15.3e-2243.40 O-Glycosyl hydrolases family 17 protein[more]
AT5G58480.15.9e-2143.65 O-Glycosyl hydrolases family 17 protein[more]
BLAST of Cp4.1LG01g18280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449465803|ref|XP_004150617.1|1.3e-4672.86PREDICTED: glucan endo-1,3-beta-glucosidase 6 [Cucumis sativus][more]
gi|659072759|ref|XP_008467025.1|6.1e-4474.62PREDICTED: glucan endo-1,3-beta-glucosidase 6 [Cucumis melo][more]
gi|307136338|gb|ADN34155.1|5.7e-4277.59glucan endo-13-beta-glucosidase [Cucumis melo subsp. melo][more]
gi|595803064|ref|XP_007201955.1|8.5e-3865.87hypothetical protein PRUPE_ppa004643mg [Prunus persica][more]
gi|823240284|ref|XP_012452764.1|1.9e-3766.67PREDICTED: glucan endo-1,3-beta-glucosidase 5 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: INTERPRO
TermDefinition
IPR017853Glycoside_hydrolase_SF
IPR013781Glycoside hydrolase, catalytic domain
IPR000490Glyco_hydro_17
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0031225 anchored component of membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g18280.1Cp4.1LG01g18280.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000490Glycoside hydrolase family 17PFAMPF00332Glyco_hydro_17coord: 37..117
score: 7.3
IPR013781Glycoside hydrolase, catalytic domainGENE3DG3DSA:3.20.20.80coord: 37..121
score: 8.7
IPR017853Glycoside hydrolase superfamilyunknownSSF51445(Trans)glycosidasescoord: 38..116
score: 2.18
NoneNo IPR availablePANTHERPTHR32227FAMILY NOT NAMEDcoord: 29..124
score: 1.2
NoneNo IPR availablePANTHERPTHR32227:SF59O-GLYCOSYL HYDROLASES FAMILY 17 PROTEINcoord: 29..124
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g18280CsaV3_5G028190Cucumber (Chinese Long) v3cpecucB0547
Cp4.1LG01g18280Bhi12G000823Wax gourdcpewgoB0494
Cp4.1LG01g18280CsGy5G018820Cucumber (Gy14) v2cgybcpeB651
Cp4.1LG01g18280Carg26051Silver-seed gourdcarcpeB0600
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g18280Cucumber (Gy14) v1cgycpeB0737
Cp4.1LG01g18280Cucurbita maxima (Rimu)cmacpeB310
Cp4.1LG01g18280Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g18280Cucurbita moschata (Rifu)cmocpeB273
Cp4.1LG01g18280Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g18280Wild cucumber (PI 183967)cpecpiB422
Cp4.1LG01g18280Cucumber (Chinese Long) v2cpecuB443
Cp4.1LG01g18280Bottle gourd (USVL1VR-Ls)cpelsiB311
Cp4.1LG01g18280Bottle gourd (USVL1VR-Ls)cpelsiB315
Cp4.1LG01g18280Watermelon (Charleston Gray)cpewcgB370
Cp4.1LG01g18280Watermelon (Charleston Gray)cpewcgB373
Cp4.1LG01g18280Watermelon (97103) v1cpewmB440
Cp4.1LG01g18280Watermelon (97103) v1cpewmB442
Cp4.1LG01g18280Melon (DHL92) v3.5.1cpemeB347
Cp4.1LG01g18280Melon (DHL92) v3.6.1cpemedB407
Cp4.1LG01g18280Wax gourdcpewgoB0491