CsGy5G016780 (gene) Cucumber (Gy14) v2

Overview
NameCsGy5G016780
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptiontranscription initiation factor TFIID subunit 1-like
LocationChr5 : 23158108 .. 23158779 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCTTTCGAGGCACATCCAAGTTTTATTCAAGTTTCAGTTGTTGGTTACGGATCAGTTGTTCAAATACTGGAATGTCTTTTACCAATTCAATCTGATTCCATATCAAGTAAGATCTCGTGCTCGCTCTCCCAACCAATGGTTCTCTTCAAAAAGATCTGATAGGTTTTGTGAACGTTCCGACATGACACGTCGAAGGTCTCCAAATTATAGGATGGAAAGGATGAGACCTCCTGATCAGCGTCCTATACGTGGGCATATGCCACCGAGCAGAAGACAAGGATTCCATTTCCTTTCACCGGCAGACGAATTGAGAGATGTGGGTCCTGCACCTGACCATTGTCATATGAGGTCTATTATGCCTGATAGGAATCAGCCTGAAAGATTGCCACTTAGAAATAGAAGTTATGATGCTATAGATCCTGAAGGAAAGATTGAAAATGACGAACATTTTTATGGTCCTGTACGTTTGGGTCAATTGACTGGGTACAATGATGGCGAACCAGATGACGATGAAAGAAGATTTAATGAGAGACATGAACCTTATTCTTATAAGCATCCATTTGGTGATTCTGATGGTGAGAGATTCCGAAGCAACAGGGAGGATTGTTCCAGGTCTTTTAGATTTTGTGCGGATAATGACCCAAGAATTTCATGGAAGAGAAGGTAG

mRNA sequence

ATGTTTCTTTCGAGGCACATCCAAGTTTTATTCAAGTTTCAGTTGTTGGTTACGGATCAGTTGTTCAAATACTGGAATGTCTTTTACCAATTCAATCTGATTCCATATCAAGTAAGATCTCGTGCTCGCTCTCCCAACCAATGGTTCTCTTCAAAAAGATCTGATAGGTTTTGTGAACGTTCCGACATGACACGTCGAAGGTCTCCAAATTATAGGATGGAAAGGATGAGACCTCCTGATCAGCGTCCTATACGTGGGCATATGCCACCGAGCAGAAGACAAGGATTCCATTTCCTTTCACCGGCAGACGAATTGAGAGATGTGGGTCCTGCACCTGACCATTGTCATATGAGGTCTATTATGCCTGATAGGAATCAGCCTGAAAGATTGCCACTTAGAAATAGAAGTTATGATGCTATAGATCCTGAAGGAAAGATTGAAAATGACGAACATTTTTATGGTCCTGTACGTTTGGGTCAATTGACTGGGTACAATGATGGCGAACCAGATGACGATGAAAGAAGATTTAATGAGAGACATGAACCTTATTCTTATAAGCATCCATTTGGTGATTCTGATGGTGAGAGATTCCGAAGCAACAGGGAGGATTGTTCCAGGTCTTTTAGATTTTGTGCGGATAATGACCCAAGAATTTCATGGAAGAGAAGGTAG

Coding sequence (CDS)

ATGTTTCTTTCGAGGCACATCCAAGTTTTATTCAAGTTTCAGTTGTTGGTTACGGATCAGTTGTTCAAATACTGGAATGTCTTTTACCAATTCAATCTGATTCCATATCAAGTAAGATCTCGTGCTCGCTCTCCCAACCAATGGTTCTCTTCAAAAAGATCTGATAGGTTTTGTGAACGTTCCGACATGACACGTCGAAGGTCTCCAAATTATAGGATGGAAAGGATGAGACCTCCTGATCAGCGTCCTATACGTGGGCATATGCCACCGAGCAGAAGACAAGGATTCCATTTCCTTTCACCGGCAGACGAATTGAGAGATGTGGGTCCTGCACCTGACCATTGTCATATGAGGTCTATTATGCCTGATAGGAATCAGCCTGAAAGATTGCCACTTAGAAATAGAAGTTATGATGCTATAGATCCTGAAGGAAAGATTGAAAATGACGAACATTTTTATGGTCCTGTACGTTTGGGTCAATTGACTGGGTACAATGATGGCGAACCAGATGACGATGAAAGAAGATTTAATGAGAGACATGAACCTTATTCTTATAAGCATCCATTTGGTGATTCTGATGGTGAGAGATTCCGAAGCAACAGGGAGGATTGTTCCAGGTCTTTTAGATTTTGTGCGGATAATGACCCAAGAATTTCATGGAAGAGAAGGTAG

Protein sequence

MFLSRHIQVLFKFQLLVTDQLFKYWNVFYQFNLIPYQVRSRARSPNQWFSSKRSDRFCERSDMTRRRSPNYRMERMRPPDQRPIRGHMPPSRRQGFHFLSPADELRDVGPAPDHCHMRSIMPDRNQPERLPLRNRSYDAIDPEGKIENDEHFYGPVRLGQLTGYNDGEPDDDERRFNERHEPYSYKHPFGDSDGERFRSNREDCSRSFRFCADNDPRISWKRR
Homology
[Close]
BLAST of CsGy5G016780 vs. NCBI nr
Match: KGN51244.1 (hypothetical protein Csa_5G503570 [Cucumis sativus])

HSP 1 Score: 468.4 bits (1204), Expect = 1.4e-128
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0 

Query: 1   MFLSRHIQVLFKFQLLVTDQLFKYWNVFYQFNLIPYQVRSRARSPNQWFSSKRSDRFCER 60
           MFLSRHIQVLFKFQLLVTDQLFKYWNVFYQFNLIPYQVRSRARSPNQWFSSKRSDRFCER
Sbjct: 1   MFLSRHIQVLFKFQLLVTDQLFKYWNVFYQFNLIPYQVRSRARSPNQWFSSKRSDRFCER 60

Query: 61  SDMTRRRSPNYRMERMRPPDQRPIRGHMPPSRRQGFHFLSPADELRDVGPAPDHCHMRSI 120
           SDMTRRRSPNYRMERMRPPDQRPIRGHMPPSRRQGFHFLSPADELRDVGPAPDHCHMRSI
Sbjct: 61  SDMTRRRSPNYRMERMRPPDQRPIRGHMPPSRRQGFHFLSPADELRDVGPAPDHCHMRSI 120

Query: 121 MPDRNQPERLPLRNRSYDAIDPEGKIENDEHFYGPVRLGQLTGYNDGEPDDDERRFNERH 180
           MPDRNQPERLPLRNRSYDAIDPEGKIENDEHFYGPVRLGQLTGYNDGEPDDDERRFNERH
Sbjct: 121 MPDRNQPERLPLRNRSYDAIDPEGKIENDEHFYGPVRLGQLTGYNDGEPDDDERRFNERH 180

Query: 181 EPYSYKHPFGDSDGERFRSNREDCSRSFRFCADNDPRISWKRR 224
           EPYSYKHPFGDSDGERFRSNREDCSRSFRFCADNDPRISWKRR
Sbjct: 181 EPYSYKHPFGDSDGERFRSNREDCSRSFRFCADNDPRISWKRR 223

[Close]
BLAST of CsGy5G016780 vs. NCBI nr
Match: XP_008463552.1 (PREDICTED: uncharacterized protein LOC103501673 [Cucumis melo] >XP_008463553.1 PREDICTED: uncharacterized protein LOC103501673 [Cucumis melo] >XP_008463555.1 PREDICTED: uncharacterized protein LOC103501673 [Cucumis melo])

HSP 1 Score: 370.9 bits (951), Expect = 3.0e-99
Identity = 175/186 (94.09%), Postives = 181/186 (97.31%), Query Frame = 0 

Query: 38   VRSRARSPNQWFSSKRSDRFCERSDMTRRRSPNYRMERMRPPDQRPIRGHMPPSRRQGFH 97
            VRS+ARSP+QWFSSKRSDRF ERSDMT RRSPNYRMERMRPPDQRPIRGHM P RRQGFH
Sbjct: 892  VRSQARSPSQWFSSKRSDRFYERSDMTHRRSPNYRMERMRPPDQRPIRGHM-PGRRQGFH 951

Query: 98   FLSPADELRDVGPAPDHCHMRSIMPDRNQPERLPLRNRSYDAIDPEGKIENDEHFYGPVR 157
            FLSPADELRDVGPAPDHCHMRSI+PDRNQPERLP+RNRSYDAIDPEG+IENDEHFYGPVR
Sbjct: 952  FLSPADELRDVGPAPDHCHMRSIIPDRNQPERLPIRNRSYDAIDPEGRIENDEHFYGPVR 1011

Query: 158  LGQLTGYNDGEPDDDERRFNERHEPYSYKHPFGDSDGERFRSNREDCSRSFRFCADNDPR 217
            LGQLTGYNDGEPDDDERRFNERHEPYS+KHPFGDSDGERFRSNREDCSR FRFCADNDPR
Sbjct: 1012 LGQLTGYNDGEPDDDERRFNERHEPYSFKHPFGDSDGERFRSNREDCSRPFRFCADNDPR 1071

Query: 218  ISWKRR 224
            ISWKRR
Sbjct: 1072 ISWKRR 1076

[Close]
BLAST of CsGy5G016780 vs. NCBI nr
Match: XP_008463556.1 (PREDICTED: uncharacterized protein LOC103501674 isoform X1 [Cucumis melo] >XP_008463557.1 PREDICTED: uncharacterized protein LOC103501674 isoform X1 [Cucumis melo])

HSP 1 Score: 342.4 bits (877), Expect = 1.1e-90
Identity = 165/188 (87.77%), Postives = 173/188 (92.02%), Query Frame = 0 

Query: 38   VRSRARSPNQWFSSKRSDRFCERSDMTRRRSPNYRMERMRPPDQRPIRGHMPPSRRQGFH 97
            VR+RARSP+QWFSSKRSDRFCERSDMT RRSPNYR ERMR PD RPIRGHMPP RRQGFH
Sbjct: 927  VRARARSPSQWFSSKRSDRFCERSDMTHRRSPNYRSERMRSPDHRPIRGHMPPGRRQGFH 986

Query: 98   FLSPADELRDVGPAPDHCHMRSIMPDRNQPERLPLRNRSYDAIDPEGKIENDEHFYG-PV 157
            FLS +DELRDVGPAPDH HMRSI+PDRNQ ERLPLRNRSYDAIDP+G+IEND  FYG PV
Sbjct: 987  FLSASDELRDVGPAPDHGHMRSIIPDRNQTERLPLRNRSYDAIDPQGRIENDNFFYGPPV 1046

Query: 158  RLGQLTGYNDGEPDDDERRFNERHEP-YSYKHPFGDSDGERFRSNREDCSRSFRFCADND 217
            RLGQLTGYNDGEPDDDERRFNERHEP YS+KHPFGDSDGERFR+NREDCSR FRFC  ND
Sbjct: 1047 RLGQLTGYNDGEPDDDERRFNERHEPLYSFKHPFGDSDGERFRNNREDCSRPFRFCPGND 1106

Query: 218  PRISWKRR 224
            PRISWKRR
Sbjct: 1107 PRISWKRR 1114

[Close]
BLAST of CsGy5G016780 vs. NCBI nr
Match: XP_008463559.1 (PREDICTED: uncharacterized protein LOC103501674 isoform X2 [Cucumis melo] >XP_008463561.1 PREDICTED: uncharacterized protein LOC103501674 isoform X2 [Cucumis melo] >XP_008463562.1 PREDICTED: uncharacterized protein LOC103501674 isoform X2 [Cucumis melo])

HSP 1 Score: 342.4 bits (877), Expect = 1.1e-90
Identity = 165/188 (87.77%), Postives = 173/188 (92.02%), Query Frame = 0 

Query: 38   VRSRARSPNQWFSSKRSDRFCERSDMTRRRSPNYRMERMRPPDQRPIRGHMPPSRRQGFH 97
            VR+RARSP+QWFSSKRSDRFCERSDMT RRSPNYR ERMR PD RPIRGHMPP RRQGFH
Sbjct: 906  VRARARSPSQWFSSKRSDRFCERSDMTHRRSPNYRSERMRSPDHRPIRGHMPPGRRQGFH 965

Query: 98   FLSPADELRDVGPAPDHCHMRSIMPDRNQPERLPLRNRSYDAIDPEGKIENDEHFYG-PV 157
            FLS +DELRDVGPAPDH HMRSI+PDRNQ ERLPLRNRSYDAIDP+G+IEND  FYG PV
Sbjct: 966  FLSASDELRDVGPAPDHGHMRSIIPDRNQTERLPLRNRSYDAIDPQGRIENDNFFYGPPV 1025

Query: 158  RLGQLTGYNDGEPDDDERRFNERHEP-YSYKHPFGDSDGERFRSNREDCSRSFRFCADND 217
            RLGQLTGYNDGEPDDDERRFNERHEP YS+KHPFGDSDGERFR+NREDCSR FRFC  ND
Sbjct: 1026 RLGQLTGYNDGEPDDDERRFNERHEPLYSFKHPFGDSDGERFRNNREDCSRPFRFCPGND 1085

Query: 218  PRISWKRR 224
            PRISWKRR
Sbjct: 1086 PRISWKRR 1093

[Close]
BLAST of CsGy5G016780 vs. NCBI nr
Match: XP_011655336.1 (PREDICTED: uncharacterized protein LOC101204567 isoform X2 [Cucumis sativus] >XP_004149834.2 PREDICTED: uncharacterized protein LOC101204567 isoform X2 [Cucumis sativus] >KGN51245.1 hypothetical protein Csa_5G503580 [Cucumis sativus])

HSP 1 Score: 342.4 bits (877), Expect = 1.1e-90
Identity = 165/188 (87.77%), Postives = 173/188 (92.02%), Query Frame = 0 

Query: 38   VRSRARSPNQWFSSKRSDRFCERSDMTRRRSPNYRMERMRPPDQRPIRGHMPPSRRQGFH 97
            VRSRARSP QWFSSKRSDRFCERSDMT RRSPNYR ERMR PDQRPIRGHMPP RRQGFH
Sbjct: 876  VRSRARSPGQWFSSKRSDRFCERSDMTHRRSPNYRSERMRSPDQRPIRGHMPPGRRQGFH 935

Query: 98   FLSPADELRDVGPAPDHCHMRSIMPDRNQPERLPLRNRSYDAIDPEGKIENDEHFYG-PV 157
            FLS +DE+RDVGPAPDH HMRSI+PDRNQ ERLPLRNRSYDAIDP+G+IEND+ FYG PV
Sbjct: 936  FLSASDEMRDVGPAPDHGHMRSIIPDRNQTERLPLRNRSYDAIDPQGRIENDDFFYGPPV 995

Query: 158  RLGQLTGYNDGEPDDDERRFNERHEP-YSYKHPFGDSDGERFRSNREDCSRSFRFCADND 217
            RLGQLTGYNDG PDDDERRFNERHEP YS+KHPFGDSDGERFR+NREDCSR FRFC  ND
Sbjct: 996  RLGQLTGYNDGVPDDDERRFNERHEPLYSFKHPFGDSDGERFRNNREDCSRPFRFCPGND 1055

Query: 218  PRISWKRR 224
            PRISWKRR
Sbjct: 1056 PRISWKRR 1063

[Close]
BLAST of CsGy5G016780 vs. TrEMBL
Match: tr|A0A0A0KQR7|A0A0A0KQR7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G503570 PE=4 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 9.1e-129
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0 

Query: 1   MFLSRHIQVLFKFQLLVTDQLFKYWNVFYQFNLIPYQVRSRARSPNQWFSSKRSDRFCER 60
           MFLSRHIQVLFKFQLLVTDQLFKYWNVFYQFNLIPYQVRSRARSPNQWFSSKRSDRFCER
Sbjct: 1   MFLSRHIQVLFKFQLLVTDQLFKYWNVFYQFNLIPYQVRSRARSPNQWFSSKRSDRFCER 60

Query: 61  SDMTRRRSPNYRMERMRPPDQRPIRGHMPPSRRQGFHFLSPADELRDVGPAPDHCHMRSI 120
           SDMTRRRSPNYRMERMRPPDQRPIRGHMPPSRRQGFHFLSPADELRDVGPAPDHCHMRSI
Sbjct: 61  SDMTRRRSPNYRMERMRPPDQRPIRGHMPPSRRQGFHFLSPADELRDVGPAPDHCHMRSI 120

Query: 121 MPDRNQPERLPLRNRSYDAIDPEGKIENDEHFYGPVRLGQLTGYNDGEPDDDERRFNERH 180
           MPDRNQPERLPLRNRSYDAIDPEGKIENDEHFYGPVRLGQLTGYNDGEPDDDERRFNERH
Sbjct: 121 MPDRNQPERLPLRNRSYDAIDPEGKIENDEHFYGPVRLGQLTGYNDGEPDDDERRFNERH 180

Query: 181 EPYSYKHPFGDSDGERFRSNREDCSRSFRFCADNDPRISWKRR 224
           EPYSYKHPFGDSDGERFRSNREDCSRSFRFCADNDPRISWKRR
Sbjct: 181 EPYSYKHPFGDSDGERFRSNREDCSRSFRFCADNDPRISWKRR 223

[Close]
BLAST of CsGy5G016780 vs. TrEMBL
Match: tr|A0A1S3CJH9|A0A1S3CJH9_CUCME (uncharacterized protein LOC103501673 OS=Cucumis melo OX=3656 GN=LOC103501673 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 2.0e-99
Identity = 175/186 (94.09%), Postives = 181/186 (97.31%), Query Frame = 0 

Query: 38   VRSRARSPNQWFSSKRSDRFCERSDMTRRRSPNYRMERMRPPDQRPIRGHMPPSRRQGFH 97
            VRS+ARSP+QWFSSKRSDRF ERSDMT RRSPNYRMERMRPPDQRPIRGHM P RRQGFH
Sbjct: 892  VRSQARSPSQWFSSKRSDRFYERSDMTHRRSPNYRMERMRPPDQRPIRGHM-PGRRQGFH 951

Query: 98   FLSPADELRDVGPAPDHCHMRSIMPDRNQPERLPLRNRSYDAIDPEGKIENDEHFYGPVR 157
            FLSPADELRDVGPAPDHCHMRSI+PDRNQPERLP+RNRSYDAIDPEG+IENDEHFYGPVR
Sbjct: 952  FLSPADELRDVGPAPDHCHMRSIIPDRNQPERLPIRNRSYDAIDPEGRIENDEHFYGPVR 1011

Query: 158  LGQLTGYNDGEPDDDERRFNERHEPYSYKHPFGDSDGERFRSNREDCSRSFRFCADNDPR 217
            LGQLTGYNDGEPDDDERRFNERHEPYS+KHPFGDSDGERFRSNREDCSR FRFCADNDPR
Sbjct: 1012 LGQLTGYNDGEPDDDERRFNERHEPYSFKHPFGDSDGERFRSNREDCSRPFRFCADNDPR 1071

Query: 218  ISWKRR 224
            ISWKRR
Sbjct: 1072 ISWKRR 1076

[Close]
BLAST of CsGy5G016780 vs. TrEMBL
Match: tr|A0A1S3CK17|A0A1S3CK17_CUCME (uncharacterized protein LOC103501674 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501674 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 7.5e-91
Identity = 165/188 (87.77%), Postives = 173/188 (92.02%), Query Frame = 0 

Query: 38   VRSRARSPNQWFSSKRSDRFCERSDMTRRRSPNYRMERMRPPDQRPIRGHMPPSRRQGFH 97
            VR+RARSP+QWFSSKRSDRFCERSDMT RRSPNYR ERMR PD RPIRGHMPP RRQGFH
Sbjct: 927  VRARARSPSQWFSSKRSDRFCERSDMTHRRSPNYRSERMRSPDHRPIRGHMPPGRRQGFH 986

Query: 98   FLSPADELRDVGPAPDHCHMRSIMPDRNQPERLPLRNRSYDAIDPEGKIENDEHFYG-PV 157
            FLS +DELRDVGPAPDH HMRSI+PDRNQ ERLPLRNRSYDAIDP+G+IEND  FYG PV
Sbjct: 987  FLSASDELRDVGPAPDHGHMRSIIPDRNQTERLPLRNRSYDAIDPQGRIENDNFFYGPPV 1046

Query: 158  RLGQLTGYNDGEPDDDERRFNERHEP-YSYKHPFGDSDGERFRSNREDCSRSFRFCADND 217
            RLGQLTGYNDGEPDDDERRFNERHEP YS+KHPFGDSDGERFR+NREDCSR FRFC  ND
Sbjct: 1047 RLGQLTGYNDGEPDDDERRFNERHEPLYSFKHPFGDSDGERFRNNREDCSRPFRFCPGND 1106

Query: 218  PRISWKRR 224
            PRISWKRR
Sbjct: 1107 PRISWKRR 1114

[Close]
BLAST of CsGy5G016780 vs. TrEMBL
Match: tr|A0A1S3CJJ9|A0A1S3CJJ9_CUCME (uncharacterized protein LOC103501674 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501674 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 7.5e-91
Identity = 165/188 (87.77%), Postives = 173/188 (92.02%), Query Frame = 0 

Query: 38   VRSRARSPNQWFSSKRSDRFCERSDMTRRRSPNYRMERMRPPDQRPIRGHMPPSRRQGFH 97
            VR+RARSP+QWFSSKRSDRFCERSDMT RRSPNYR ERMR PD RPIRGHMPP RRQGFH
Sbjct: 906  VRARARSPSQWFSSKRSDRFCERSDMTHRRSPNYRSERMRSPDHRPIRGHMPPGRRQGFH 965

Query: 98   FLSPADELRDVGPAPDHCHMRSIMPDRNQPERLPLRNRSYDAIDPEGKIENDEHFYG-PV 157
            FLS +DELRDVGPAPDH HMRSI+PDRNQ ERLPLRNRSYDAIDP+G+IEND  FYG PV
Sbjct: 966  FLSASDELRDVGPAPDHGHMRSIIPDRNQTERLPLRNRSYDAIDPQGRIENDNFFYGPPV 1025

Query: 158  RLGQLTGYNDGEPDDDERRFNERHEP-YSYKHPFGDSDGERFRSNREDCSRSFRFCADND 217
            RLGQLTGYNDGEPDDDERRFNERHEP YS+KHPFGDSDGERFR+NREDCSR FRFC  ND
Sbjct: 1026 RLGQLTGYNDGEPDDDERRFNERHEPLYSFKHPFGDSDGERFRNNREDCSRPFRFCPGND 1085

Query: 218  PRISWKRR 224
            PRISWKRR
Sbjct: 1086 PRISWKRR 1093

[Close]
BLAST of CsGy5G016780 vs. TrEMBL
Match: tr|A0A0A0KNM2|A0A0A0KNM2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G503580 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 7.5e-91
Identity = 165/188 (87.77%), Postives = 173/188 (92.02%), Query Frame = 0 

Query: 38   VRSRARSPNQWFSSKRSDRFCERSDMTRRRSPNYRMERMRPPDQRPIRGHMPPSRRQGFH 97
            VRSRARSP QWFSSKRSDRFCERSDMT RRSPNYR ERMR PDQRPIRGHMPP RRQGFH
Sbjct: 876  VRSRARSPGQWFSSKRSDRFCERSDMTHRRSPNYRSERMRSPDQRPIRGHMPPGRRQGFH 935

Query: 98   FLSPADELRDVGPAPDHCHMRSIMPDRNQPERLPLRNRSYDAIDPEGKIENDEHFYG-PV 157
            FLS +DE+RDVGPAPDH HMRSI+PDRNQ ERLPLRNRSYDAIDP+G+IEND+ FYG PV
Sbjct: 936  FLSASDEMRDVGPAPDHGHMRSIIPDRNQTERLPLRNRSYDAIDPQGRIENDDFFYGPPV 995

Query: 158  RLGQLTGYNDGEPDDDERRFNERHEP-YSYKHPFGDSDGERFRSNREDCSRSFRFCADND 217
            RLGQLTGYNDG PDDDERRFNERHEP YS+KHPFGDSDGERFR+NREDCSR FRFC  ND
Sbjct: 996  RLGQLTGYNDGVPDDDERRFNERHEPLYSFKHPFGDSDGERFRNNREDCSRPFRFCPGND 1055

Query: 218  PRISWKRR 224
            PRISWKRR
Sbjct: 1056 PRISWKRR 1063

The following BLAST results are available for this feature:
BLAST of CsGy5G016780 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN51244.11.4e-128100.00hypothetical protein Csa_5G503570 [Cucumis sativus][more]
XP_008463552.13.0e-9994.09PREDICTED: uncharacterized protein LOC103501673 [Cucumis melo] >XP_008463553.1 P... [more]
XP_008463556.11.1e-9087.77PREDICTED: uncharacterized protein LOC103501674 isoform X1 [Cucumis melo] >XP_00... [more]
XP_008463559.11.1e-9087.77PREDICTED: uncharacterized protein LOC103501674 isoform X2 [Cucumis melo] >XP_00... [more]
XP_011655336.11.1e-9087.77PREDICTED: uncharacterized protein LOC101204567 isoform X2 [Cucumis sativus] >XP... [more]
BLAST of CsGy5G016780 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy5G016780 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy5G016780 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KQR7|A0A0A0KQR7_CUCSA9.1e-129100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G503570 PE=4 SV=1[more]
tr|A0A1S3CJH9|A0A1S3CJH9_CUCME2.0e-9994.09uncharacterized protein LOC103501673 OS=Cucumis melo OX=3656 GN=LOC103501673 PE=... [more]
tr|A0A1S3CK17|A0A1S3CK17_CUCME7.5e-9187.77uncharacterized protein LOC103501674 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3CJJ9|A0A1S3CJJ9_CUCME7.5e-9187.77uncharacterized protein LOC103501674 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A0A0KNM2|A0A0A0KNM2_CUCSA7.5e-9187.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G503580 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G016780.1CsGy5G016780.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..197
NoneNo IPR availablePANTHERPTHR34536FAMILY NOT NAMEDcoord: 38..216
NoneNo IPR availablePANTHERPTHR34536:SF2SUBFAMILY NOT NAMEDcoord: 38..216

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy5G016780Csa5G503570Cucumber (Chinese Long) v2cgybcuB223
CsGy5G016780CSPI05G17060Wild cucumber (PI 183967)cgybcpiB225
CsGy5G016780CmaCh04G026200Cucurbita maxima (Rimu)cgybcmaB684
CsGy5G016780CmoCh04G027410Cucurbita moschata (Rifu)cgybcmoB663
CsGy5G016780Lsi02G016840Bottle gourd (USVL1VR-Ls)cgyblsiB323
CsGy5G016780Cp4.1LG01g24100Cucurbita pepo (Zucchini)cgybcpeB654
CsGy5G016780CsaV3_5G026060Cucumber (Chinese Long) v3cgybcucB232
CsGy5G016780Carg04521Silver-seed gourdcarcgybB0684
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy5G016780Cucumber (Gy14) v2cgybcgybB096
CsGy5G016780Cucumber (Gy14) v2cgybcgybB124
CsGy5G016780Cucurbita maxima (Rimu)cgybcmaB599
CsGy5G016780Cucurbita maxima (Rimu)cgybcmaB610
CsGy5G016780Cucurbita maxima (Rimu)cgybcmaB649
CsGy5G016780Cucurbita maxima (Rimu)cgybcmaB698
CsGy5G016780Cucurbita moschata (Rifu)cgybcmoB572
CsGy5G016780Cucurbita moschata (Rifu)cgybcmoB585
CsGy5G016780Cucurbita moschata (Rifu)cgybcmoB626
CsGy5G016780Cucurbita moschata (Rifu)cgybcmoB679
CsGy5G016780Cucurbita pepo (Zucchini)cgybcpeB599
CsGy5G016780Cucurbita pepo (Zucchini)cgybcpeB627
CsGy5G016780Cucurbita pepo (Zucchini)cgybcpeB666
CsGy5G016780Cucurbita pepo (Zucchini)cgybcpeB677
CsGy5G016780Bottle gourd (USVL1VR-Ls)cgyblsiB313
CsGy5G016780Bottle gourd (USVL1VR-Ls)cgyblsiB318
CsGy5G016780Bottle gourd (USVL1VR-Ls)cgyblsiB329
CsGy5G016780Melon (DHL92) v3.5.1cgybmeB300
CsGy5G016780Melon (DHL92) v3.5.1cgybmeB347
CsGy5G016780Melon (DHL92) v3.6.1cgybmedB300
CsGy5G016780Watermelon (Charleston Gray)cgybwcgB314
CsGy5G016780Watermelon (Charleston Gray)cgybwcgB322
CsGy5G016780Watermelon (97103) v1cgybwmB339
CsGy5G016780Watermelon (97103) v1cgybwmB346
CsGy5G016780Silver-seed gourdcarcgybB0281
CsGy5G016780Silver-seed gourdcarcgybB0685
CsGy5G016780Watermelon (97103) v2cgybwmbB336
CsGy5G016780Watermelon (97103) v2cgybwmbB389
CsGy5G016780Wax gourdcgybwgoB440