CsGy5G010010 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G010010
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Uracil-DNA glycosylase
Location	Chr5 : 8894151 .. 8900339 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTACTTAAATGATGTATGTTTTGTATTTTAGAAATTAAATTTGTTAGAATTTTGTATTGAGTCCAATTTTGTTTACATTAATTTAAGAACTGTTGAAAGAGTAGTCATTTGAAAAGGCTACACCATTCCCTACAAAGGACATGGAGTCATTCACCGAAAATAAAAATTAAAACCCATGGAGTCATTGACCGTAACAAAGGACATGAGGAGACATAAGGAGGCAAGTCTCATACCATCAATTTCAAACCATCTTTGGAGAGATGAAAGGTTTATAGCGGGATTTTACCTTGCTTCCCGCCATTGAACCACACTCCTCTCCACACCTACAATGGCTTCTTCCTCCGCTTCACTCTCATCCAAAACCAGAACCCTAATCGACATCTTCCAGCCAGCGCTTTCCAAACGCTTAAAAACCTCACAGACGTTGAAAACCTTAGCAACCAACGACGACAAATGCGATTCAGACCTCACATTGGCTTCCTCTTCCGCTGACATTTCTGCCTCCCAGATATCCCGCATGGAAACCAACAAATGGATCGCCAGATCCAAGCGCAATCTCAAAACTTGCTCAGATAGGGTTTCTAAATGGGAGAATGGATGTGTGAAGTTGGAGGAGCTTTTGGTGGAGGAGACATGGTTTGAAGCTCTTCCTGGAGAGTTCCAGAAGCCCTATGCTCTTAATCTTTGCAAATTTGTACAGACTGAAATTTGTAGTAGTGGTGTCCCTATTTATCCTCCTCCTTCTTTGATCTTTAATGCTCTGAATTCTACCCCTTTTGATAGGGTCAAAGTTGTTATTCTTGGCCAAGATCCTTATCATGGGCCTGGTCAAGCTATGGGTCTTTCATTTTCTGTTCCTGAGGGAGTTAAAATCCCATCTAGTCTTCTCAACATATTCAAGGAACTGAGGGATGATCTTGGTTGTTCCATCCCATCCCATGGAAATCTCGGGAAATGGGCCGTTCAGGTGCTGTTGTCTTTCATCTCTTTGTTCTGTAGACTTAGTTATGCTTACTTAAATGTATCTACTTCTCTAATATATCGGTGTTGTGATTTTTCTTGCTTATTTATCATTAGATGAAAGTTATGTGAAAATAGGTTTGGGACACACATGAACTGTACAATCCATGGTCCTCAATTCGCCTTTTGGGTGAGGAAGCCCGTTTTTTTCTCTTATGGCTTGCAGGGTTTGTGCAGTCTTGTGGGTCTTATGGGGTGAGTGTAACATGTTTAAGGGGGTGGAGAGGGGATCCCAAGAAGTTATGGTCCGTTGTTTGCTTTTATGTTTCTCTTTAGACTTCGATTTTGAAGATTTTTTATAATTGTTCTATAGGTGTGATTTCGTATAATTGGAGTCCCTTCTTGTAAAGGAGTTTTTCTTTTTAGTGGACTTGCCTTTTTGTTTGCGCATGCATTCTTTAATTTTTTTCTCATCAAAAGTTGTTGATTTTACATATAAAAAAATGGATTATACAATGGATGTGGTTCCCATCACAAGGATGTGATTTTGGTGATTGCTTAGGGAATGAGGAAGTATTTTTGACATTTCGCCTTTTATTTGATTAAAAACTTCACTTCTGAATTGTTATTATGTAAAAATTTGTTAATATGTCGAGAATTTGGGTTCTTACTAGGTGACTTCTCTAAGTTGAGATATCGTATCATACAATTATTAGTTCTTGTTGAAGCATTCTAAGTGAGGTTTGTCATGACATTACTCTTATGAACGTGGACTTGAGTGGATTCGTAGGATAAGTTGATCGATTTGGGAGATTTTTCTGCATGGAAAAATGCATGATTAGTTGGTTTCTGAAAGGCTATTTTGTTAGGATGTATTTGAAGTCCTATCTGGCGTCTTTTTCATTTTTTTTTTGCTCTAAAATGATTCTTATATACATTGTAGGGAGTCTTGTTGCTTAATGCTGTTCTCTCAGGTAATTTCCTCCCAGGTTTTACTCCTTCTTTTCTCAGTCTACTTTTATTTTTTAAACAAGTAAACTTATGGTGAAGGTATGATCAAAATGCTTTGTTTTGCTCTTTGTGATTGTTTTTGAGCAAGTATTTCACCATGAGTAACTCTTGACCATCTTAAAAGCTTTGTAATAGCTACATAACAGTTTAAATTTTCAGCCCCAAAGAATGATAGCGAACTTTAATGCCATCAGCAACATCTAGGACATCGAACCAGAAACTCTTCAAACACCACCAAACTGTGATGAAGAGCAACAAGGCCGGCATAGATAGCCATATCTTCAAAGCCAAAAGAGAAATTAGCTACAACTAAAGCAAAATTGTTTGAGGAACAAACTAACAAATGCGCCAGTCCTCAAAATAACCTTAAAAGAAACATCAGACCCAAAGAAGGCCAAAGTGCCCTGTCCAAGTTGCCATAACCAAACCGAAAAAACAGAAACCTAGACTTTGGATACTTTAAAGGGTGGAGTTTAAAGGGTGAAAATACTTTAAAGGGTGGAGTTTCTTCTTCTGTCACATTTCTATCAAATTTAGGGTTTCCTTAAAGTTGCCTTTTGTCCATCAAACTTTAATAAGAGTTCTATATTGTTCTATTCTGACGTAAGGATACATGCTTCCTGCATTTAGTTATCGATTAAAATTTTGGTTTTACCTATTTAGTTCGAAAGCATCAAGCGAACTCTCACGCTAAGAGAGGATGGGAACAATTTACTGATGCTGTCATCAAGACAATATCACAAAAGAAGGAAGGGATTATCTTTCTACTTTGGGGAAACTCCGCTCAAGCGAAATTGAGGTACTTTTGTTGTATGATATTAGTTCTAAGTTCCTAACAGGGAGTGCACGACTCTGGAAAGAACGAAAATAATAACAAAATCAAGATTAAAATATAAACTGCAACCTTTAGATTTTTCTTAATGGGAAAAGAAAATGAAGACTGAGGGCTTTCACTTGAAGACTTGAAGTATTTGATAGATAAAATGGGATGAGATATTAGATAATTAGTGTAACTCAGTTTATACAAGTCTAATTGTTGACACTTAGATTAACGTGATTGATTAATATTTTGGATTTATTTCATTGTTTGTTAATTTTATCGTAAGCCTCAATAATAACTTTTTAGGAATGTCAGGAAGCTTTTGAATATTATTTTGAAGTAAACAACAAAATAACATTTTGGTCTTCAAAACCTACATGATTGAAGTACTTTGAGAGGCTAGGAGGCCTCTCTCAAAGACCATTTCCCAAAAATTGTGTACTTAAAAAAACTGTTGATTTTATTTCTAAGACTCAACTTTGACAAGCTTATATTAAGAATTACAATAAATATGTCATTGGTAATATTCTCCTTTCTCAATTGCATTTCATATTAATAGTTCACAAATTAAAAGCCTCCTTTGAATGTAAAACGCACGCCCACACATGAGGGGATGTTTTGTAAACACTTTACTATAGTGTAGTCGTTTGCTACCAATGTTGTTATGCAAGCTTTAATCTTTCAAGTATAGGAACTTTTCCTGTGAAGTACATGAAACAATTTGGGGAAAAAATGGTTTTGCTGCGTTTTAAAATCAACGTAGTGCAATTTTCATCTACTTTAGCGATCTAACGTTCTATTGTCTTGATAAAACTTACAAGAGCACAAAGAGATTTAATTTCTCTTCTTTGGGGGGCAATAACACCCTACATCACTTAGAATCTAATGTCTGAAGTGAACAGGTTAATTGATGAGAAAAAGCATCACATTCTCAAAGCAGCGCATCCTTCTGGTTTGTCTGCTAACAGAGGCTTCTTTGGTTGCAGGTTAGTTTCATCGTTTAATTCCTTCATACACTTTTTGAACCTTCCTTTTCTTAAAATATTAACTAGGATTTGCTCTACCTCCAGCCATTGTATTTTATCATTTCCCTTCAGTGTAGTTCTCCCAATAACAACATTTTATTGCCAGTGCATGGCTTGGTATTTTGTGTATATCACTTGGTTTTCTGCCTTTTCTCTAAGTTAAACTTACTATGTTGGAGCGCTTTGCTCGATTTTACAAGTGATAATGGCTGGAGCATGAATTTGGTATGATTTTTCTGATTGTGAAAAAAATATTTAGCCTGCCCCAAACAAACATTTCCAAACTTTTTATGTGGTTTTGATTCATAGTAAAAAATGATTGAGAGTTCTCAAAATACATAAAAGCACTTTTGGAACATAGTTTAGATATAATGTCACTTAAAAGTATTTACTCTCGAGAATCATACCAAACTCCCACTTACCTTTTTGGCTCTTCCCTTAAGTTCTGTGGTCCATCTCTCAGAACATAGACAATTTTGTGAGGCTGTTGAAGTTTATAAATCGTTAAGAGATTATATGTTTATGTGATTCACTAGTATGAAGCTGTTTAGATGGGTGTTTTTTCATTTCCCTTGGAATTTTAGTTTGTTTACTGCCAACTTTGGATTTTCGACAGGCATTTTTCTCGAACAAACATACTACTCAAGGAAATGGGTACTGCTTCCATAGATTGGCAACTTTGATCCAAACATGTGAACCATTGAAGTTCATTTTTTGTGGATACACTTTAAGATCCCCAGTCATGCTCAGACCTGCTTGCTTGATGACTTTTTGTTGAATTTTCACTTGTCGCTTCACCGTTGTTTAAATGTCGAGATGCCCATCCTTTATCTTTTTGTATTATAGTGTTTATTCCTGCTGTTTGATTTTTATTCCAAAGCAGCAGCAGAACCGTTCTTTTTATAAAATAGGGTAAAATTAGAAGTTAGTCTTTCATATGGTGACCAGTGGTTTTCATAAATCAGGCTAGATGTTTTGTTGTACCTAACTTTTGGCGGTTCTCTCAATCCTATCATGGGAAGTGGGAAGATTCATATTAGTCCCTGTCGAGTGTGGATGGAAGGATATGGGTAGAACATTAACTGCCCTTCTTGTGCTTTCAATAGTAAAGTTGTAATTTTGAAGAAAGAAAGATGACTTGTAAAACAAAGAAGAAAAGAAAACACATGTGCCTCCAATGCTTAAGTCATAATCCAGGGAGCAACTTACCTTTTTTGGTTGTATAATCTCTTATTTATAGAGGGTTGAACCCTTGGCTTACCAGTCTAAAAGGGACTCGGAGATGATGATTTGAACTTATCAGAGTCTTAGAGCATGGACTTTCGTGCAAGGGAAGTGGATGGCCTGGTCGAGGTGGGTCTCTTAGATTGTGGACCTATAACTCTCCTTTTCTGTTTCTTGGCATGTTTCTTGCATTTCATTGACCTTTAGGTGACTCTTGCTTTGTTGCTATTGAAATATGATAAACACACCAGGTTTAAAGAAATGCAAGTAACAAGGAAAGGAAAGACCATTAGAATGAGAGTTATTAGGGTGAGTGGCCCAATTGGCCCAGCTTATCAAGTCAAAAAGGCGAAGGCTATCCACTTCCTTTCACAGAGGTTCACTTCTTGTGGGTCATGATCTAATTTGCAATTGGCTTTAATAAGCATCTCTCGGTCCTTTTTGGATCAGGAACTCTAGGGTCCTCCTATATAAATAAGAGATCATAACTTCATGTTAGAAAGATCAATGCAACTATGTATGTATCATGCACCATGGAAATTTTATGCAATCTGATAACTCAAGAATTTATTATTTTAGTTCCAAGTATGCAACTTAGTCTAGGCGATGAGATTACACTATGCAATAAAAGATGTAATTGGATAATTTTTATCTCGTTGCTTAAACTTTTAGATGTCTACTTAGTACAAATTTTCCTCCATCTCGTTTAAGTATAAACGGAGTAAGTTACGGTTTATTTGATGATAAATGAATTAGAACACCTTATCTTCTATCTTTTGTGGTCTCTATAATTGTATAAATTATATTCTCAATATTTCTTATCTAAACTGAATATATTATCTACATTGTGGGTGGAATGTAATGAATGATATAGAGACGGATGAGTACGAATGATGATGTTGAACTAACTCTAACTTAACACAAACAAAGGAAAGTGTGAAGGAAAGTGTGTCTATAAAAGAATGCAAGCCCGAAAGATTTATGATTCACCTTGTAGATGCCTTCATTGCATATATTCTATCAGTTGAGAAATAAAAGCCCATTTTCTTCAACAATATCAGTTTTCAGAATTTTGGGAGGAACATGCTTCCGTCAGATACAGGGAGGGAGAGAGGAGGGAGAGAGGAGGGGAGGAGAGAAATGGTAA

mRNA sequence

TTTTACTTAAATGATGTATGTTTTGTATTTTAGAAATTAAATTTGTTAGAATTTTGTATTGAGTCCAATTTTGTTTACATTAATTTAAGAACTGTTGAAAGAGTAGTCATTTGAAAAGGCTACACCATTCCCTACAAAGGACATGGAGTCATTCACCGAAAATAAAAATTAAAACCCATGGAGTCATTGACCGTAACAAAGGACATGAGGAGACATAAGGAGGCAAGTCTCATACCATCAATTTCAAACCATCTTTGGAGAGATGAAAGGTTTATAGCGGGATTTTACCTTGCTTCCCGCCATTGAACCACACTCCTCTCCACACCTACAATGGCTTCTTCCTCCGCTTCACTCTCATCCAAAACCAGAACCCTAATCGACATCTTCCAGCCAGCGCTTTCCAAACGCTTAAAAACCTCACAGACGTTGAAAACCTTAGCAACCAACGACGACAAATGCGATTCAGACCTCACATTGGCTTCCTCTTCCGCTGACATTTCTGCCTCCCAGATATCCCGCATGGAAACCAACAAATGGATCGCCAGATCCAAGCGCAATCTCAAAACTTGCTCAGATAGGGTTTCTAAATGGGAGAATGGATGTGTGAAGTTGGAGGAGCTTTTGGTGGAGGAGACATGGTTTGAAGCTCTTCCTGGAGAGTTCCAGAAGCCCTATGCTCTTAATCTTTGCAAATTTGTACAGACTGAAATTTGTAGTAGTGGTGTCCCTATTTATCCTCCTCCTTCTTTGATCTTTAATGCTCTGAATTCTACCCCTTTTGATAGGGTCAAAGTTGTTATTCTTGGCCAAGATCCTTATCATGGGCCTGGTCAAGCTATGGGTCTTTCATTTTCTGTTCCTGAGGGAGTTAAAATCCCATCTAGTCTTCTCAACATATTCAAGGAACTGAGGGATGATCTTGGTTGTTCCATCCCATCCCATGGAAATCTCGGGAAATGGGCCGTTCAGGGAGTCTTGTTGCTTAATGCTGTTCTCTCAGTTCGAAAGCATCAAGCGAACTCTCACGCTAAGAGAGGATGGGAACAATTTACTGATGCTGTCATCAAGACAATATCACAAAAGAAGGAAGGGATTATCTTTCTACTTTGGGGAAACTCCGCTCAAGCGAAATTGAGGTTAATTGATGAGAAAAAGCATCACATTCTCAAAGCAGCGCATCCTTCTGGTTTGTCTGCTAACAGAGGCTTCTTTGGTTGCAGAATTTTGGGAGGAACATGCTTCCGTCAGATACAGGGAGGGAGAGAGGAGGGAGAGAGGAGGGGAGGAGAGAAATGGTAA

Coding sequence (CDS)

ATGGCTTCTTCCTCCGCTTCACTCTCATCCAAAACCAGAACCCTAATCGACATCTTCCAGCCAGCGCTTTCCAAACGCTTAAAAACCTCACAGACGTTGAAAACCTTAGCAACCAACGACGACAAATGCGATTCAGACCTCACATTGGCTTCCTCTTCCGCTGACATTTCTGCCTCCCAGATATCCCGCATGGAAACCAACAAATGGATCGCCAGATCCAAGCGCAATCTCAAAACTTGCTCAGATAGGGTTTCTAAATGGGAGAATGGATGTGTGAAGTTGGAGGAGCTTTTGGTGGAGGAGACATGGTTTGAAGCTCTTCCTGGAGAGTTCCAGAAGCCCTATGCTCTTAATCTTTGCAAATTTGTACAGACTGAAATTTGTAGTAGTGGTGTCCCTATTTATCCTCCTCCTTCTTTGATCTTTAATGCTCTGAATTCTACCCCTTTTGATAGGGTCAAAGTTGTTATTCTTGGCCAAGATCCTTATCATGGGCCTGGTCAAGCTATGGGTCTTTCATTTTCTGTTCCTGAGGGAGTTAAAATCCCATCTAGTCTTCTCAACATATTCAAGGAACTGAGGGATGATCTTGGTTGTTCCATCCCATCCCATGGAAATCTCGGGAAATGGGCCGTTCAGGGAGTCTTGTTGCTTAATGCTGTTCTCTCAGTTCGAAAGCATCAAGCGAACTCTCACGCTAAGAGAGGATGGGAACAATTTACTGATGCTGTCATCAAGACAATATCACAAAAGAAGGAAGGGATTATCTTTCTACTTTGGGGAAACTCCGCTCAAGCGAAATTGAGGTTAATTGATGAGAAAAAGCATCACATTCTCAAAGCAGCGCATCCTTCTGGTTTGTCTGCTAACAGAGGCTTCTTTGGTTGCAGAATTTTGGGAGGAACATGCTTCCGTCAGATACAGGGAGGGAGAGAGGAGGGAGAGAGGAGGGGAGGAGAGAAATGGTAA

Protein sequence

MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLCKFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQFTDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCRILGGTCFRQIQGGREEGERRGGEKW

Homology

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BLAST of CsGy5G010010 vs. NCBI nr
Match: XP_004140430.1 (PREDICTED: uracil-DNA glycosylase isoform X1 [Cucumis sativus] >KGN50850.1 hypothetical protein Csa_5G289610 [Cucumis sativus])

HSP 1 Score: 596.3 bits (1536), Expect = 6.3e-167
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60
           MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60

Query: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120
           ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC
Sbjct: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF 240
           KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF
Sbjct: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF 240

Query: 241 TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCR 298
           TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCR
Sbjct: 241 TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCR 297

[Close]

BLAST of CsGy5G010010 vs. NCBI nr
Match: XP_008465227.1 (PREDICTED: uracil-DNA glycosylase, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 584.7 bits (1506), Expect = 1.9e-163
Identity = 288/297 (96.97%), Postives = 295/297 (99.33%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60
           MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSS D+SASQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60

Query: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120
           ISRMETNKW+ARSKRNLK CSDRVSKWENGC+KLEELLVEETWFEALPGEF+KPYALNLC
Sbjct: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF 240
           KIPSSLLNIFKEL+DDLGCSIPSHGNLGKWAVQGVLLLNAVLSVR+HQANSHAKRGWEQF
Sbjct: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVREHQANSHAKRGWEQF 240

Query: 241 TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCR 298
           TDAVIKTISQKKEGI+FLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCR
Sbjct: 241 TDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCR 297

[Close]

BLAST of CsGy5G010010 vs. NCBI nr
Match: XP_008465225.1 (PREDICTED: uracil-DNA glycosylase, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 570.9 bits (1470), Expect = 2.8e-159
Identity = 288/322 (89.44%), Postives = 295/322 (91.61%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60
           MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSS D+SASQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60

Query: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120
           ISRMETNKW+ARSKRNLK CSDRVSKWENGC+KLEELLVEETWFEALPGEF+KPYALNLC
Sbjct: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLS----------------- 240
           KIPSSLLNIFKEL+DDLGCSIPSHGNLGKWAVQGVLLLNAVLS                 
Sbjct: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSATSRILNQKLFKHHQTV 240

Query: 241 --------VRKHQANSHAKRGWEQFTDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKK 298
                   VR+HQANSHAKRGWEQFTDAVIKTISQKKEGI+FLLWGNSAQAKLRLIDEKK
Sbjct: 241 MKSNKADIVREHQANSHAKRGWEQFTDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKK 300

[Close]

BLAST of CsGy5G010010 vs. NCBI nr
Match: XP_022981553.1 (uracil-DNA glycosylase, mitochondrial [Cucurbita maxima])

HSP 1 Score: 561.2 bits (1445), Expect = 2.2e-156
Identity = 276/297 (92.93%), Postives = 288/297 (96.97%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60
           MASSSASL SKTRTLIDIFQPALSKRLKTSQTLKTLAT D+KCDS+LTLASSS DIS+SQ
Sbjct: 1   MASSSASLKSKTRTLIDIFQPALSKRLKTSQTLKTLATTDEKCDSELTLASSSMDISSSQ 60

Query: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120
            SRMETNKW+ARS RNLK  SDRVSKWENGCVKLEELLV+ETWFEALPGEFQKPYALNLC
Sbjct: 61  KSRMETNKWLARSNRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFQKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFV+TEICSSGVPIYPPP LIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVETEICSSGVPIYPPPCLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF 240
           KIPSSLLNIFKELR+DLGCSIPSHGNL KWAVQGVLLLNAVL+VRKHQANSHAK+GWEQF
Sbjct: 181 KIPSSLLNIFKELREDLGCSIPSHGNLKKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF 240

Query: 241 TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCR 298
           TDAVI+TISQKKEG++FLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCR
Sbjct: 241 TDAVIQTISQKKEGVVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCR 297

[Close]

BLAST of CsGy5G010010 vs. NCBI nr
Match: XP_023525611.1 (uracil-DNA glycosylase, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 560.8 bits (1444), Expect = 2.9e-156
Identity = 275/297 (92.59%), Postives = 288/297 (96.97%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60
           MAS S SL SKTRTLIDIFQPALSKRLKTSQTLKTLAT DDKCDS+LTLASSS DIS+SQ
Sbjct: 1   MASFSPSLKSKTRTLIDIFQPALSKRLKTSQTLKTLATTDDKCDSELTLASSSMDISSSQ 60

Query: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120
            SRMETNKW+ARSKRNLK  SDRVSKWENGCVKLEELLV+ETWFEALPGEF+KPYALNLC
Sbjct: 61  KSRMETNKWLARSKRNLKISSDRVSKWENGCVKLEELLVDETWFEALPGEFEKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFV+TEICSSGVP+YPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVETEICSSGVPVYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF 240
           KIPSSLLNIFKELR+DLGCSIPSHGNL KWAVQGVLLLNAVL+VRKHQANSHAK+GWEQF
Sbjct: 181 KIPSSLLNIFKELREDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQF 240

Query: 241 TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCR 298
           TDAVI+TISQKKEG++FLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCR
Sbjct: 241 TDAVIQTISQKKEGVVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCR 297

[Close]

BLAST of CsGy5G010010 vs. TAIR10
Match: AT3G18630.1 (uracil dna glycosylase)

HSP 1 Score: 368.2 bits (944), Expect = 5.0e-102
Identity = 194/309 (62.78%), Postives = 229/309 (74.11%), Query Frame = 0


Query: 9   SSKTRTLIDIFQPALSKRLKT---------------SQTLKTLATNDDKCDSDLTLASSS 68
           SS  +TL+D FQPA  KRLK                S+ L ++A +  +     ++A  S
Sbjct: 3   SSTPKTLMDFFQPA--KRLKASPSSSSFPAVSVAGGSRDLGSVANSPPRVTVTTSVADDS 62

Query: 69  ADISASQISRMETNKWIARSKRNLKTCSDRV--SKWENGC-VKLEELLVEETWFEALPGE 128
           + ++  QI+R E NK++A+SKRNL  CS+RV  +K E  C V L ELLVEE+W +ALPGE
Sbjct: 63  SGLTPEQIARAEFNKFVAKSKRNLAVCSERVTKAKSEGNCYVPLSELLVEESWLKALPGE 122

Query: 129 FQKPYALNLCKFVQTEIC--SSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQ 188
           F KPYA +L  F++ EI   S    IYPP  LIFNALN+TPFDRVK VI+GQDPYHGPGQ
Sbjct: 123 FHKPYAKSLSDFLEREIITDSKSPLIYPPQHLIFNALNTTPFDRVKTVIIGQDPYHGPGQ 182

Query: 189 AMGLSFSVPEGVKIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQ 248
           AMGLSFSVPEG K+PSSLLNIFKEL  D+GCSIP HGNL KWAVQGVLLLNAVL+VR  Q
Sbjct: 183 AMGLSFSVPEGEKLPSSLLNIFKELHKDVGCSIPRHGNLQKWAVQGVLLLNAVLTVRSKQ 242

Query: 249 ANSHAKRGWEQFTDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLS 298
            NSHAK+GWEQFTDAVI++ISQ+KEG++FLLWG  AQ K +LID  KHHIL AAHPSGLS
Sbjct: 243 PNSHAKKGWEQFTDAVIQSISQQKEGVVFLLWGRYAQEKSKLIDATKHHILTAAHPSGLS 302

[Close]

BLAST of CsGy5G010010 vs. Swiss-Prot
Match: sp|Q9LIH6|UNG_ARATH (Uracil-DNA glycosylase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=UNG PE=1 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 9.1e-101
Identity = 194/309 (62.78%), Postives = 229/309 (74.11%), Query Frame = 0


Query: 9   SSKTRTLIDIFQPALSKRLKT---------------SQTLKTLATNDDKCDSDLTLASSS 68
           SS  +TL+D FQPA  KRLK                S+ L ++A +  +     ++A  S
Sbjct: 3   SSTPKTLMDFFQPA--KRLKASPSSSSFPAVSVAGGSRDLGSVANSPPRVTVTTSVADDS 62

Query: 69  ADISASQISRMETNKWIARSKRNLKTCSDRV--SKWENGC-VKLEELLVEETWFEALPGE 128
           + ++  QI+R E NK++A+SKRNL  CS+RV  +K E  C V L ELLVEE+W +ALPGE
Sbjct: 63  SGLTPEQIARAEFNKFVAKSKRNLAVCSERVTKAKSEGNCYVPLSELLVEESWLKALPGE 122

Query: 129 FQKPYALNLCKFVQTEIC--SSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQ 188
           F KPYA +L  F++ EI   S    IYPP  LIFNALN+TPFDRVK VI+GQDPYHGPGQ
Sbjct: 123 FHKPYAKSLSDFLEREIITDSKSPLIYPPQHLIFNALNTTPFDRVKTVIIGQDPYHGPGQ 182

Query: 189 AMGLSFSVPEGVKIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQ 248
           AMGLSFSVPEG K+PSSLLNIFKEL  D+GCSIP HGNL KWAVQGVLLLNAVL+VR  Q
Sbjct: 183 AMGLSFSVPEGEKLPSSLLNIFKELHKDVGCSIPRHGNLQKWAVQGVLLLNAVLTVRSKQ 242

Query: 249 ANSHAKRGWEQFTDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLS 298
            NSHAK+GWEQFTDAVI++ISQ+KEG++FLLWG  AQ K +LID  KHHIL AAHPSGLS
Sbjct: 243 PNSHAKKGWEQFTDAVIQSISQQKEGVVFLLWGRYAQEKSKLIDATKHHILTAAHPSGLS 302

[Close]

BLAST of CsGy5G010010 vs. Swiss-Prot
Match: sp|A7I0A8|UNG_CAMHC (Uracil-DNA glycosylase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) OX=360107 GN=ung PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 9.5e-66
Identity = 128/206 (62.14%), Postives = 152/206 (73.79%), Query Frame = 0


Query: 92  VKLEELLVEETWFEALPGEFQKPYALNLCKFVQTEICSSGVPIYPPPSLIFNALNSTPFD 151
           +KLE + +E++W E L GEF  PY L + K     + +SGV IYPP +LIFNA N TPFD
Sbjct: 3   IKLENIKIEKSWKEVLKGEFLSPYFLEI-KEKLVCLKNSGVTIYPPGNLIFNAFNLTPFD 62

Query: 152 RVKVVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELRDDLGCSIPSHGNLGKWA 211
           +VKVVILGQDPYH   QAMGLSFSVP+ V+IP SL+NIFKE+  DLG + P+ G+L  WA
Sbjct: 63  KVKVVILGQDPYHEVNQAMGLSFSVPKDVRIPPSLINIFKEINSDLGINEPNCGDLTFWA 122

Query: 212 VQGVLLLNAVLSVRKHQANSHAKRGWEQFTDAVIKTISQKKEGIIFLLWGNSAQAKLRLI 271
            QGVLLLNA LSV    ANSH   GW+ FTDAVIKT+SQK+E I+F+LWGN A+AK  LI
Sbjct: 123 KQGVLLLNASLSVSAKIANSHKNFGWQIFTDAVIKTLSQKRENIVFMLWGNFAKAKATLI 182

Query: 272 DEKKHHILKAAHPSGLSANRGFFGCR 298
           D KKH IL AAHPS L A   FFGC+
Sbjct: 183 DAKKHLILTAAHPSPL-AGGAFFGCK 206

[Close]

BLAST of CsGy5G010010 vs. Swiss-Prot
Match: sp|C1DQR0|UNG_AZOVD (Uracil-DNA glycosylase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) OX=322710 GN=ung PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 8.0e-65
Identity = 118/201 (58.71%), Postives = 150/201 (74.63%), Query Frame = 0


Query: 95  EELLVEETWFEALPGEFQKPYALNLCKFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVK 154
           + + +E +W EAL  EF+KPY   L  F++ E  ++G  IYPP SLIFNAL+STP D+VK
Sbjct: 6   DRVRLEASWKEALHDEFEKPYMQELSDFLRRE-KAAGKEIYPPGSLIFNALDSTPLDQVK 65

Query: 155 VVILGQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQG 214
           VVI+GQDPYHGPGQA GL FSV  GV +P SL NIFKEL+ DL   IP HG+L +WA QG
Sbjct: 66  VVIIGQDPYHGPGQAHGLCFSVQPGVPVPPSLQNIFKELKRDLNIDIPKHGHLQRWAEQG 125

Query: 215 VLLLNAVLSVRKHQANSHAKRGWEQFTDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEK 274
           VLLLN  L+V +  A SHA  GW++FTD VI+ +SQ++E ++F+LWG+ AQ+K RLID  
Sbjct: 126 VLLLNTSLTVERGNAGSHAGMGWQRFTDRVIEVVSQRREHVVFMLWGSHAQSKRRLIDSS 185

Query: 275 KHHILKAAHPSGLSANRGFFG 296
           KH +L +AHPS LSA+RGF G
Sbjct: 186 KHLVLCSAHPSPLSAHRGFIG 205

[Close]

BLAST of CsGy5G010010 vs. Swiss-Prot
Match: sp|A6L7T5|UNG_BACV8 (Uracil-DNA glycosylase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / NBRC 14291 / NCTC 11154) OX=435590 GN=ung PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 4.0e-64
Identity = 115/197 (58.38%), Postives = 146/197 (74.11%), Query Frame = 0


Query: 99  VEETWFEALPGEFQKPYALNLCKFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVIL 158
           +EE+W + L  EF+K Y + L +FV++E  ++   IYPP   IFNA N  PFD+VKVVI+
Sbjct: 5   IEESWKQHLAPEFEKDYFIRLTEFVRSEYQTA--TIYPPGRFIFNAFNLCPFDKVKVVII 64

Query: 159 GQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLL 218
           GQDPYHGPGQA GL FSV +GV  P SL NIFKE++ DLG  IP+ GNL +WA QGVLLL
Sbjct: 65  GQDPYHGPGQAHGLCFSVNDGVPFPPSLQNIFKEIQSDLGAPIPTSGNLTRWANQGVLLL 124

Query: 219 NAVLSVRKHQANSHAKRGWEQFTDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHI 278
           NA L+VR HQA SH +RGWE+FTDA I+ +++++E I+F+LWG+ AQ K   ID  KH +
Sbjct: 125 NATLTVRAHQAGSHQRRGWEEFTDAAIRVLAEQRENIVFILWGSYAQKKGAFIDRNKHLV 184

Query: 279 LKAAHPSGLSANRGFFG 296
           L +AHPS LSA  GFFG
Sbjct: 185 LASAHPSPLSAYNGFFG 199

[Close]

BLAST of CsGy5G010010 vs. Swiss-Prot
Match: sp|Q5L9D9|UNG2_BACFN (Uracil-DNA glycosylase 2 OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC 9343) OX=272559 GN=ung2 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 8.9e-64
Identity = 114/197 (57.87%), Postives = 145/197 (73.60%), Query Frame = 0


Query: 99  VEETWFEALPGEFQKPYALNLCKFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVIL 158
           +EE+W   L  EF+K Y   L +FV++E   S   I+PP  LIFNA N  PFD+VKVVI+
Sbjct: 5   IEESWKTHLEPEFEKDYFRTLTEFVRSEY--SQYQIFPPGKLIFNAFNLCPFDKVKVVII 64

Query: 159 GQDPYHGPGQAMGLSFSVPEGVKIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLL 218
           GQDPYHGPGQA GL FSV +GV  P SL+NIFKE+++D+G   PS GNL +WA QGVLLL
Sbjct: 65  GQDPYHGPGQAHGLCFSVNDGVAFPPSLVNIFKEIKEDIGTPAPSTGNLTRWAEQGVLLL 124

Query: 219 NAVLSVRKHQANSHAKRGWEQFTDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHI 278
           NA L+VR HQA SH +RGWE+FTDA I+ +++++E ++F+LWG+ AQ K   ID  KH +
Sbjct: 125 NATLTVRAHQAGSHQRRGWEEFTDAAIRVLAEERENLVFILWGSYAQKKGAFIDRNKHLV 184

Query: 279 LKAAHPSGLSANRGFFG 296
           L +AHPS LSA  GFFG
Sbjct: 185 LSSAHPSPLSAYNGFFG 199

[Close]

BLAST of CsGy5G010010 vs. TrEMBL
Match: tr|A0A0A0KMG3|A0A0A0KMG3_CUCSA (Uracil-DNA glycosylase OS=Cucumis sativus OX=3659 GN=Csa_5G289610 PE=3 SV=1)

HSP 1 Score: 596.3 bits (1536), Expect = 4.2e-167
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60
           MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60

Query: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120
           ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC
Sbjct: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF 240
           KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF
Sbjct: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF 240

Query: 241 TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCR 298
           TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCR
Sbjct: 241 TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCR 297

[Close]

BLAST of CsGy5G010010 vs. TrEMBL
Match: tr|A0A1S3CPW3|A0A1S3CPW3_CUCME (Uracil-DNA glycosylase OS=Cucumis melo OX=3656 GN=LOC103502882 PE=3 SV=1)

HSP 1 Score: 584.7 bits (1506), Expect = 1.3e-163
Identity = 288/297 (96.97%), Postives = 295/297 (99.33%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60
           MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSS D+SASQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60

Query: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120
           ISRMETNKW+ARSKRNLK CSDRVSKWENGC+KLEELLVEETWFEALPGEF+KPYALNLC
Sbjct: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQF 240
           KIPSSLLNIFKEL+DDLGCSIPSHGNLGKWAVQGVLLLNAVLSVR+HQANSHAKRGWEQF
Sbjct: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVREHQANSHAKRGWEQF 240

Query: 241 TDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCR 298
           TDAVIKTISQKKEGI+FLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCR
Sbjct: 241 TDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCR 297

[Close]

BLAST of CsGy5G010010 vs. TrEMBL
Match: tr|A0A1S3CND7|A0A1S3CND7_CUCME (Uracil-DNA glycosylase OS=Cucumis melo OX=3656 GN=LOC103502882 PE=3 SV=1)

HSP 1 Score: 570.9 bits (1470), Expect = 1.9e-159
Identity = 288/322 (89.44%), Postives = 295/322 (91.61%), Query Frame = 0


Query: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQ 60
           MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSS D+SASQ
Sbjct: 1   MASSSASLSSKTRTLIDIFQPALSKRLKTSQTLKTLATNDDKCDSDLTLASSSTDMSASQ 60

Query: 61  ISRMETNKWIARSKRNLKTCSDRVSKWENGCVKLEELLVEETWFEALPGEFQKPYALNLC 120
           ISRMETNKW+ARSKRNLK CSDRVSKWENGC+KLEELLVEETWFEALPGEF+KPYALNLC
Sbjct: 61  ISRMETNKWMARSKRNLKICSDRVSKWENGCMKLEELLVEETWFEALPGEFEKPYALNLC 120

Query: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180
           KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV
Sbjct: 121 KFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGV 180

Query: 181 KIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLS----------------- 240
           KIPSSLLNIFKEL+DDLGCSIPSHGNLGKWAVQGVLLLNAVLS                 
Sbjct: 181 KIPSSLLNIFKELKDDLGCSIPSHGNLGKWAVQGVLLLNAVLSATSRILNQKLFKHHQTV 240

Query: 241 --------VRKHQANSHAKRGWEQFTDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKK 298
                   VR+HQANSHAKRGWEQFTDAVIKTISQKKEGI+FLLWGNSAQAKLRLIDEKK
Sbjct: 241 MKSNKADIVREHQANSHAKRGWEQFTDAVIKTISQKKEGIVFLLWGNSAQAKLRLIDEKK 300

[Close]

BLAST of CsGy5G010010 vs. TrEMBL
Match: tr|W9RJ98|W9RJ98_9ROSA (Uracil-DNA glycosylase OS=Morus notabilis OX=981085 GN=L484_009862 PE=3 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 1.7e-112
Identity = 214/308 (69.48%), Postives = 248/308 (80.52%), Query Frame = 0


Query: 8   LSSKTRTLIDIFQP---ALSKRLKTSQTLKTLATNDDKCDSDLTLASSSAD--------- 67
           ++SK +TL D F P     +KRLK     +TL++ ++KCD++  + + S+          
Sbjct: 1   MASKAKTLTDFFPPLQQPSAKRLK-----QTLSSTNNKCDANGIIPNRSSSSSGIGDGGA 60

Query: 68  --ISASQISRMETNKWIARSKRNLKTCSDRV--SKWENGC--VKLEELLVEETWFEALPG 127
             +SA Q SRME  K +A+S+RNLK CS RV  S+ E GC  VKLEELLVEE+W EALPG
Sbjct: 61  DGLSADQKSRMEFQKVLAKSRRNLKICSQRVSNSQSEGGCGYVKLEELLVEESWLEALPG 120

Query: 128 EFQKPYALNLCKFVQTEICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQA 187
           EFQKPYA NL KF+++E  + GV +YPP  LIFNALNSTPFDRVK VILGQDPYHG GQA
Sbjct: 121 EFQKPYAKNLSKFLESETSAVGVTVYPPSHLIFNALNSTPFDRVKAVILGQDPYHGLGQA 180

Query: 188 MGLSFSVPEGVKIPSSLLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQA 247
           MGLSFSVPEGVK+PSSL+NIFKEL+ D+GCSIPSHGNL KWAVQGVLLLNAVL+VRKHQA
Sbjct: 181 MGLSFSVPEGVKVPSSLVNIFKELKQDVGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQA 240

Query: 248 NSHAKRGWEQFTDAVIKTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSA 298
           NSHAK+GWEQFTDAVIKTISQ+KEG++FLLWGNSAQ K RLIDE KHHILKAAHPSGLSA
Sbjct: 241 NSHAKKGWEQFTDAVIKTISQRKEGVVFLLWGNSAQEKRRLIDESKHHILKAAHPSGLSA 300

[Close]

BLAST of CsGy5G010010 vs. TrEMBL
Match: tr|M5XNR7|M5XNR7_PRUPE (Uracil-DNA glycosylase OS=Prunus persica OX=3760 GN=PRUPE_ppa022483mg PE=3 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 5.0e-112
Identity = 208/292 (71.23%), Postives = 234/292 (80.14%), Query Frame = 0


Query: 10  SKTRTLIDIFQPALS--KRLKTSQTLKTLATNDDKCDSDLTLASSSADISASQISRMETN 69
           +K +TL+D+FQP  S  KRLKT     T + +           SSS+D++A Q SRME  
Sbjct: 5   NKNKTLLDLFQPTASSAKRLKTDSIRATHSDSVSPVPPPSHDDSSSSDLTAQQKSRMEFQ 64

Query: 70  KWIARSKRNLKTCSDRV--SKWENGCVKLEELLVEETWFEALPGEFQKPYALNLCKFVQT 129
           K +A+++RNL  CS+R+  S  +   VKLEELLVEETW EA P E QKPYA  L KFV+ 
Sbjct: 65  KLLAKARRNLSICSNRLSNSNSKGEGVKLEELLVEETWLEAFPSELQKPYAKTLSKFVEN 124

Query: 130 EICSSGVPIYPPPSLIFNALNSTPFDRVKVVILGQDPYHGPGQAMGLSFSVPEGVKIPSS 189
           EIC   +PIYPP  LIFNALNSTPFDRVK VILGQDPYHGPGQAMGLSFSVPEGVK+PSS
Sbjct: 125 EICGGALPIYPPTHLIFNALNSTPFDRVKAVILGQDPYHGPGQAMGLSFSVPEGVKVPSS 184

Query: 190 LLNIFKELRDDLGCSIPSHGNLGKWAVQGVLLLNAVLSVRKHQANSHAKRGWEQFTDAVI 249
           L+NIFKEL  DLGCSIPSHGNL KWAVQGVLLLNAVL+VR HQANSHAK+GWEQFTDAVI
Sbjct: 185 LVNIFKELHQDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRNHQANSHAKKGWEQFTDAVI 244

Query: 250 KTISQKKEGIIFLLWGNSAQAKLRLIDEKKHHILKAAHPSGLSANRGFFGCR 298
           KTISQK+EG++FLLWGNSAQ K +LIDE KHHILKAAHPSGLSANRGFFGCR
Sbjct: 245 KTISQKREGVVFLLWGNSAQQKSKLIDESKHHILKAAHPSGLSANRGFFGCR 296

The following BLAST results are available for this feature:

BLAST of CsGy5G010010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140430.1	6.3e-167	100.00	PREDICTED: uracil-DNA glycosylase isoform X1 [Cucumis sativus] >KGN50850.1 hypot...	[more]
XP_008465227.1	1.9e-163	96.97	PREDICTED: uracil-DNA glycosylase, mitochondrial isoform X2 [Cucumis melo]	[more]
XP_008465225.1	2.8e-159	89.44	PREDICTED: uracil-DNA glycosylase, mitochondrial isoform X1 [Cucumis melo]	[more]
XP_022981553.1	2.2e-156	92.93	uracil-DNA glycosylase, mitochondrial [Cucurbita maxima]	[more]
XP_023525611.1	2.9e-156	92.59	uracil-DNA glycosylase, mitochondrial [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy5G010010 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18630.1	5.0e-102	62.78	uracil dna glycosylase	[more]

BLAST of CsGy5G010010 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LIH6\|UNG_ARATH	9.1e-101	62.78	Uracil-DNA glycosylase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=UNG PE=...	[more]
sp\|A7I0A8\|UNG_CAMHC	9.5e-66	62.14	Uracil-DNA glycosylase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568...	[more]
sp\|C1DQR0\|UNG_AZOVD	8.0e-65	58.71	Uracil-DNA glycosylase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) OX=...	[more]
sp\|A6L7T5\|UNG_BACV8	4.0e-64	58.38	Uracil-DNA glycosylase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / JC...	[more]
sp\|Q5L9D9\|UNG2_BACFN	8.9e-64	57.87	Uracil-DNA glycosylase 2 OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 /...	[more]

BLAST of CsGy5G010010 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KMG3\|A0A0A0KMG3_CUCSA	4.2e-167	100.00	Uracil-DNA glycosylase OS=Cucumis sativus OX=3659 GN=Csa_5G289610 PE=3 SV=1	[more]
tr\|A0A1S3CPW3\|A0A1S3CPW3_CUCME	1.3e-163	96.97	Uracil-DNA glycosylase OS=Cucumis melo OX=3656 GN=LOC103502882 PE=3 SV=1	[more]
tr\|A0A1S3CND7\|A0A1S3CND7_CUCME	1.9e-159	89.44	Uracil-DNA glycosylase OS=Cucumis melo OX=3656 GN=LOC103502882 PE=3 SV=1	[more]
tr\|W9RJ98\|W9RJ98_9ROSA	1.7e-112	69.48	Uracil-DNA glycosylase OS=Morus notabilis OX=981085 GN=L484_009862 PE=3 SV=1	[more]
tr\|M5XNR7\|M5XNR7_PRUPE	5.0e-112	71.23	Uracil-DNA glycosylase OS=Prunus persica OX=3760 GN=PRUPE_ppa022483mg PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds
GO:0004844	uracil DNA N-glycosylase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006284	base-excision repair
GO:0006281	DNA repair

Vocabulary: **INTERPRO**
Term	Definition
IPR018085	Ura-DNA_Glyclase_AS
IPR036895	Uracil-DNA_glycosylase-like_sf
IPR002043	UDG_fam1
IPR005122	Uracil-DNA_glycosylase-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006284	base-excision repair
biological_process	GO:0006281	DNA repair
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004844	uracil DNA N-glycosylase activity
molecular_function	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G010010.1	CsGy5G010010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00987	UDG_2_a	coord: 146..305 e-value: 1.1E-30 score: 118.0
None	No IPR available	PANTHER	PTHR11264:SF9	URACIL-DNA GLYCOSYLASE, MITOCHONDRIAL	coord: 63..298
IPR005122	Uracil-DNA glycosylase-like	SMART	SM00986	UDG_2	coord: 146..305 e-value: 1.1E-30 score: 118.0
IPR005122	Uracil-DNA glycosylase-like	PFAM	PF03167	UDG	coord: 151..293 e-value: 7.1E-22 score: 78.0
IPR002043	Uracil-DNA glycosylase family 1	TIGRFAM	TIGR00628	TIGR00628	coord: 101..298 e-value: 8.1E-74 score: 246.0
IPR002043	Uracil-DNA glycosylase family 1	PANTHER	PTHR11264	URACIL-DNA GLYCOSYLASE	coord: 63..298
IPR002043	Uracil-DNA glycosylase family 1	HAMAP	MF_00148	UDG	coord: 100..322 score: 34.799
IPR002043	Uracil-DNA glycosylase family 1	CDD	cd10027	UDG_F1	coord: 114..307 e-value: 9.07944E-113 score: 327.15
IPR036895	Uracil-DNA glycosylase-like domain superfamily	GENE3D	G3DSA:3.40.470.10		coord: 93..308 e-value: 5.9E-88 score: 296.3
IPR036895	Uracil-DNA glycosylase-like domain superfamily	SUPERFAMILY	SSF52141	Uracil-DNA glycosylase-like	coord: 98..298
IPR018085	Uracil-DNA glycosylase, active site	PROSITE	PS00130	U_DNA_GLYCOSYLASE	coord: 154..163

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G010010	Cla016882	Watermelon (97103) v1	cgybwmB410
CsGy5G010010	Csa5G289610	Cucumber (Chinese Long) v2	cgybcuB232
CsGy5G010010	ClCG11G001190	Watermelon (Charleston Gray)	cgybwcgB329
CsGy5G010010	CSPI05G12490	Wild cucumber (PI 183967)	cgybcpiB235
CsGy5G010010	Lsi11G001310	Bottle gourd (USVL1VR-Ls)	cgyblsiB307
CsGy5G010010	MELO3C026796.2	Melon (DHL92) v3.6.1	cgybmedB319
CsGy5G010010	CsaV3_5G013250	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G010010	Cla97C11G207590	Watermelon (97103) v2	cgybwmbB342
CsGy5G010010	Bhi07G000115	Wax gourd	cgybwgoB491

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G010010	Cucurbita maxima (Rimu)	cgybcmaB664
CsGy5G010010	Cucurbita moschata (Rifu)	cgybcmoB641
CsGy5G010010	Cucurbita pepo (Zucchini)	cgybcpeB642
CsGy5G010010	Silver-seed gourd	carcgybB0191