CsGy5G006300 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G006300
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	zinc finger CCCH domain-containing protein 11
Location	Chr5 : 4244250 .. 4250557 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGAAGGACGCGATGGTCATTTAAACATAACAAAGCGAAATCTGCCTTCCCCATCCATCCTCCGTTCTTCAGGTTAGAGAAGAACAGGCTCTGATAAATTTGTTCGTACAAACCCTAATCATCTAACATCGTCCATAATTTAAGCGAATTTTCTGTTTTTATCTTCGATTTTCGTTTTATTTCTGGCTATCAATTGACTTTGAATGCGAAATAAGCATGCCGCCGAAGCAGCAATCGAAATCCGAATTAGCGAAGAAGCAGAAGGTTGTTGAAGACAAGACTTTCGGTCTCAAGAACAAGAATAAGAGCAAAAACGTACAGAAATATGTTCAAAATCTCAAGCAATCCGTCCAGCCAAAAGTCGACTCGACTAAAGTAGCTGCCAAGGTCCGAGTTTCTTCTCCATTTCTCGTCCAAGTTTAATATTCTGGTCAATCGAGGGGACCGTTATGAATAAATGTTCAATTTCAATTTTTTTTTCCTACTATTTGGAACGAGAAGAAGCTGATTGATTTATTTTGGTATTGAGCAGAAAAAGAAGGAGGAAGAAAAAGCTAAAGAGAAGGAGTTGAATGACTTGTTTAAGATTGCTGTTAGTCAGCCCAAAGTACCCGTTGGTACGTGCGCTTTATTATATATCGTCTTTAGTTTTGGTTGAGATTTGTTGTTTGTTTCGAAGCTTTTGCATTTTACTGATGTGATATTTGATTTTGGATTTTGGTTGTTTGGTTAGGTGTTGATCCCAAGTCGATAGTTTGTGAGTTTTTTAAAGTGGGACAGTGTACGAAAGGGTTTAAATGCAAGTTTTCACATGATTTGAATGTCCAGAGGAAGGGTGAAAAGATTGATATTTACAGTGATAAGCGTGATGAAGGTGAGTGATTAACAATTTTGTTTCCTACAAGCCATATGCTTTAATTTCACAGCTTCTTATTATTAAGCTTGAAACTTTTCCTTAGAAACGATGGAGGATTGGGATCAAGAGACGTTGGAGAAGGTCGTCGAGTCAAAAAAGAACGAGTATAACCTCAACAAGCCGACTGAAATTGTATGTTTCTAATGTCTCTTTCATTGTCTTTTTACGTTAATTTGTAATGCCTAATCTTGTTAGTTCTGACATATTAACTCGAGTATTCAATTCCTTTTTTTTTATCATCTCTTTGTTGGATCCTAAGGAGTATCAGTCTTACACCTTTTCTAGAAATGAACCCACTAAAGTTTTTCGCCTTGAATTGCCTTGAGGAATAATACGAAATCATTGTCTTGTAGAAAAAAGAACATCGTTGTTCACTTTTGTGTTTGGTTTATGTTTAATGCTTTCTCATTTGAGATTCAGGCTTACACTTTGCATATCCAAGGCGTTGGCTTCAGCCATGTTTTATTTATTAACTGGAACTTGATGCATTTCCTTGTGGTTAAATTGTTGGGCATGAAGGTTATGATATCTAAACTCCACGAATTAAAAGTTAGGGTTTTTTTTAGAATTGGGCGTGTACTTGTTGAATGTATGCACGCCGTGGGATTTTTGATCAACTTATAATTTGAAGGTCTAAGGGATTGGTTTGGAAAGAACTGACCTTGATGTGCTTGTTACTGTAGAAGTGAAGCTTGCTGGTGAATAGAAAAGGCTCATATTGGTAATACTTAATTTTAGAAATATTTTTTGTGAACTTATGTTTTCAAAGCATGTATTATGTTCTAATCCCCAGCAATTGATTTATGTCGTTTATATTGGATTGACATGCAACTTTCTAAAATTCACATGGTCTTTTGGACATCTGTGTCTTGCTTGCAATAGTAGATCCCATGTTGAGATAATGTTCATTATCCTATTATAACGATCTGTTTAAAATGAATAATGTACAGGTCTGCAAGTATTTTCTGGAAGCAGTAGAAAAGAAGCAGTATGGCTGGTTCTGTGTGTCCTAATGGTGGTAAAGAATGCCACTATAGACATGCTCTTCCTCCAGGATATGTTTTAAAGTCACAAATGAAGGAACTGTTGGAAGAGGAGAGCCAAAAGATTGCCATAGAGGAAGAAATTGAGAATGAGGTGAGGGTGATTCAATCTAATTGCTGATGGCTTGGATTCTCCTTTTGACGCTTTAATACAAATAAATAAAGAAAGCCTTAAAAAGAAATTTGCAGCCTTTTTTTTGTTTGGGTGGAAGAGTGAGGGAGAGTTGTCTCAATTCCACGCTACATCTTCTTACTCTGTTTATTTGCTTATCCCAGCGTGCAAAAGTCAAGACCACTACTCCCATAACTCCGGAGCTTTTCTTTCAATGGAAGAAGAAAAAGATGGATGAAAGAAATGCTGGTTTGGCTGCACAACAAGCAGAGAGAGCTAAGAATGATCGCATGAGGTTTATAGATTATTCATATAGTTGATATTACTTGCATACAGTTACTAATAGTAATATAAGTTTTTTTTCTTTTCTTTTTCCAGTGGTCGGGAGTTGTTTCTTGCAAATGCAAGCTTGTTTGTGGACGATGCTGAGGCATACGAAAAATATCAGCGAGAAGAAGAACCTGAAGCTGACGAATCAAAGGTAACCCAATTTGTGAATTTTATAGAAGATTACAAATTGTTTATTTCTTCAGAGTCATTTTCTATTCTATTCATGAGTTATGCCATGTGAATAGTGCCTTAGTTTATGTTGTGAATGGTTACTGTGTACCAAGTCTTTAGTTTATGTTGTTAACTTGCAAATCAAATTTACTTTAACAGTCTGGCTGAAGAATTTTTCAGTCGAACATTGAAGTTTCTGGGTATTACTTGTATGTGTCTATCCCTTTGTTTGAATATAAGGATGGGTGGTGAATGTTAGTGTTTACCATATGCTAATGAAACATTCCGTTGTAGAGGTATCTGAAGAAATAAATAATTTCTTTATTGTTCAGACCTTTTGGTACCTTAGCAATGAAAAATTCTAATCATGAGGACAAATTGAGTTATTCCATGTGCTCCAATCAGTCTGAAGTAACTTACAGAATTTTGATGAACCTCAATATTATTTTCTTTTTGAGGAAGAGTTAAATTGGTTGCTCCTTTCTTTGTCTTTTTCTCAATGAAATATATATTGTTAATTAGAATTCGTTATGAAATATCTCGTGTATATTTTTTTATGTTTCTCGAGTGATATTTGCATGTTTGCAATTTTTTTTTTGGGTGGTTCAAGAAAAAATGTCCACCAAAAAGGAATAAGAAAAGGAGGACAAGTAGTTCTAGCCACAAAGAGACGAAGTGAGGAGACTAAAAGGCTCTCTAGTTGGTGTAATATTACATATAGCAATTAGAAGATTTCCTTTATGAGGTTCCATGACTTTTAAAGCTTAAAACATATTAAAATCCTAACCCAACACATACAGATTGTGTAAATCTCATTTCTCCATAGCATAGACTGCCTCAATCAGATAGCGTAAGCCCATTGATTTGAAGGCCTTTAGCTTTGTGGTTGAATAAACTTTATCATTAAAATTCTTGTGAATTCACAGTTTTGAAGTTGCTCAATTTGAAGAACATCCATATTCTCTCAGGAAAGATGGTAAGTAGCATAAGAGGCGGAGATGGTTTTGGTTTTCATTATCTTGGTTGCAAAGGACTCACCAGCTTGGCAAATTATTGAAAACAAGGGCTGCTCTTCTAGAGATGGACCATAGACCATATACAAATAGCTTTTCACTTTCTGTACTTTGGACTTCCAAAATTTATTGGAGAATGATCTTGAAATAGGGTCTCACTGCTTGTCAATTGTTTATTAGTGAAACTTCTTGGTTTGTTTAACTTCCAAATGCTATCATCAGCTTAGCTTTTCTGACAAACAAACTTTTTATGTGAGGCTGGCCAACCTCCATCTTTCTGTCGACGGGACTTTTCTTCAGAGATATTTTTTTGATAGCCATTCTCATTAAGCTGAGCTCCTTAGTTTTTCCATTGGCCCAATGATCTCTAGGCTTCCAGTCCAAATGCTAATATCCTTATACTTGGGAGGTTCTAATCTGTTGTAATCCTATTGTAAGGAAATCTCACTAAAACCTTATTTGACTAAATCATGAAGATGTGTTTGATTGTACACCTTAAAACCTTACAAGCTTGAAGACCAGCATGAATGGTGGAGCTTCTTTCAACAATGTCTTCTTGGATCTTGACAGATTCTCTTTCATTCTTCCAAAGATGTGATATCACAAATTTAGAGATATTAAGATTTCTCTCATGAGAAAACAGTTGTGCGGATACCCTTGCAAAACTTGGATCTTCTGCGATTATTTTGGTGCTAGACAGCTGCGATCTTCCTCATTCAGCCGATAGGTGCTATTACAATTGAGGAAGTTCAACTCTCTTATAGTAGAGGAAAAACCTGTTGGCTTTGTTCAATGCTTCAGGATCTTGAGAAAGGAACTCTGTTGATATAGCATTCAGTCGGAAGCTTCAAATATATCAATTAAAGGAGAGCTTTATAAACTTTCCTTCTTGAGATCATAAATATGCTATTTGGGATAAGTTAAGGATCTGGATGTCTATTTACATCTTAACCACTGGTAAAATTATTTGTGAAGTAAATCATTGGGAAACAAAGCATGCACTCAAGGTTTCTAAAGGCATGCCCCTGGTTCGAGGCTAGAGAGATTTTTGTGTAAATGACCTTAAACCAAGAAACCAAGAAAAGAGGAAAGTCTTTCTGAACTGAAGAGACTGATAATCTCATTCCTTCCTATTCATTGAGCCAAATCATGACCAGGATGCTCTCATATATCCTCCTTGCTACTGGGGTCTTATTGGCCTACAGAATGGAGTTATGAAGTTTGTGTTTCAGGGTACAGTATAGTTGTAAGATTTTGATCTTTAATAAATGTCCGAACTTCAATAGTATTTAGTATTGAAGTTAAGCTGTTTAAACCAGCTTAATTAAGAAGTTGTTGGGCCAAACGACTCTTAGTGTGAGAAAGGCCAGACTCAACACGAAAGCGGAAGCTGTTTGAAGTTTTAAATCTCCAAAGGAAAATAATGCTTTGGGTTTGTGACTGCCAAATTTGGTAATTAATCAACGAGAATATAGCCTGGAGAAGTCGATCAAATAGGAAAATTAAGTGAGGGAGGAGAAAACCATTAAAAATATTAAAAGATCTATGATGAGAAATACAATCGTCTAAAATCATTAGCCAGCTTGAGAAAATTATTAAATGAGGCCGCTACACAATATAGCTACACAATATAGCTACACATAATGGAATCTTTGACGATAGATTTAATTCTTTTGATTCTTTTTGGACTGTGGTTCAACACACAGCCTCTTGGTGGAGTACGAATTACACCAAACACTTTTGTAATTATAGCCTTTCTATGATTTTCAACAATTGGAAGGCCATTATGTCTTAGTTCCTTAGCTTCTTCCGGGGAGGGCCCTCTCATCCCTCGCCCTTAGGCTGTTCTGTTTTGTTATATGAATATACTTGTCTCTTATCAAAAAAAAAATTTTTGGATCTGGATCCTTTAATAATCAACATTTGCACGCCAAGTTACTGGACACATTACCTTCTCAAATAATTTCTTCTATAAATGGTTTCTTAAAGTGTTTTCTTTTTGTTAATTAAGATTTTGGTTCCAATTAAAGCACTTAATTGACCCTAAGTTTAAAATCCATGTCAATTTGATTTGTTATTTTAAGCAGTCCAAATCATGAAAGATTCAAAAGATACTTACATTCTTTTGATGACCATATTCAATTTCAGGCCAAGGATAATTCAACTGGTGGACCGAGTACCTCAACAAATGCTGTTGATGATTCTGAAGACGATCTTTTGGATGAAGACGATGATGACGAACTGGATCTTGACGAGCTAAACGAACTTGAGGCAACTTTGTCTAGAACTTCAATTCAGATTCGGGAGCCAGGTATCGAGGCCTCTTGAGAATTAGACAGTGTTCACTGTTGCAGAGTATGTGTTTGATATTTGGTAAAAGAGAAAAAGAAATTGAAGAACATAATGTATTGGAGTTTTATGTTCTCTTATTTGGAATTGGAGTGACTCTTGGTTCATATCAAATTTTGTCTCCCATGAGCTTTCTCTCTTCACTCTCTCTTAATCTGTTTTTGGAACTTTCACTAAATTGAAGTGTTGCACTCAATCCTTTTATGTTGCTTAATTTTTCTTTCCTTTTTTTTTTCCTTTTGTTTTAAACAAACGAGAACATAGCACGACGATAATTTATTTTACCAGCTTTTTTGGGGATTAGAATTTATGATCTTTTCTACGGTTTGGTGTATCGAACGTATACAAGTGGGTAATATATCAAACATTAATTT

mRNA sequence

GGGAAGGACGCGATGGTCATTTAAACATAACAAAGCGAAATCTGCCTTCCCCATCCATCCTCCGTTCTTCAGGTTAGAGAAGAACAGGCTCTGATAAATTTGTTCGTACAAACCCTAATCATCTAACATCGTCCATAATTTAAGCGAATTTTCTGTTTTTATCTTCGATTTTCGTTTTATTTCTGGCTATCAATTGACTTTGAATGCGAAATAAGCATGCCGCCGAAGCAGCAATCGAAATCCGAATTAGCGAAGAAGCAGAAGGTTGTTGAAGACAAGACTTTCGGTCTCAAGAACAAGAATAAGAGCAAAAACGTACAGAAATATGTTCAAAATCTCAAGCAATCCGTCCAGCCAAAAGTCGACTCGACTAAAGTAGCTGCCAAGAAAAAGAAGGAGGAAGAAAAAGCTAAAGAGAAGGAGTTGAATGACTTGTTTAAGATTGCTGTTAGTCAGCCCAAAGTACCCGTTGGTGTTGATCCCAAGTCGATAGTTTGTGAGTTTTTTAAAGTGGGACAGTGTACGAAAGGGTTTAAATGCAAGTTTTCACATGATTTGAATGTCCAGAGGAAGGGTGAAAAGATTGATATTTACAGTGATAAGCGTGATGAAGAAACGATGGAGGATTGGGATCAAGAGACGTTGGAGAAGGTCGTCGAGTCAAAAAAGAACGAGTATAACCTCAACAAGCCGACTGAAATTGTCTGCAAGTATTTTCTGGAAGCAGTAGAAAAGAAGCAGTATGGCTGGTTCTGTGTGTCCTAATGGTGGTAAAGAATGCCACTATAGACATGCTCTTCCTCCAGGATATGTTTTAAAGTCACAAATGAAGGAACTGTTGGAAGAGGAGAGCCAAAAGATTGCCATAGAGGAAGAAATTGAGAATGAGCGTGCAAAAGTCAAGACCACTACTCCCATAACTCCGGAGCTTTTCTTTCAATGGAAGAAGAAAAAGATGGATGAAAGAAATGCTGGTTTGGCTGCACAACAAGCAGAGAGAGCTAAGAATGATCGCATGAGTGGTCGGGAGTTGTTTCTTGCAAATGCAAGCTTGTTTGTGGACGATGCTGAGGCATACGAAAAATATCAGCGAGAAGAAGAACCTGAAGCTGACGAATCAAAGGCCAAGGATAATTCAACTGGTGGACCGAGTACCTCAACAAATGCTGTTGATGATTCTGAAGACGATCTTTTGGATGAAGACGATGATGACGAACTGGATCTTGACGAGCTAAACGAACTTGAGGCAACTTTGTCTAGAACTTCAATTCAGATTCGGGAGCCAGGTATCGAGGCCTCTTGAGAATTAGACAGTGTTCACTGTTGCAGAGTATGTGTTTGATATTTGGTAAAAGAGAAAAAGAAATTGAAGAACATAATGTATTGGAGTTTTATGTTCTCTTATTTGGAATTGGAGTGACTCTTGGTTCATATCAAATTTTGTCTCCCATGAGCTTTCTCTCTTCACTCTCTCTTAATCTGTTTTTGGAACTTTCACTAAATTGAAGTGTTGCACTCAATCCTTTTATGTTGCTTAATTTTTCTTTCCTTTTTTTTTTCCTTTTGTTTTAAACAAACGAGAACATAGCACGACGATAATTTATTTTACCAGCTTTTTTGGGGATTAGAATTTATGATCTTTTCTACGGTTTGGTGTATCGAACGTATACAAGTGGGTAATATATCAAACATTAATTT

Coding sequence (CDS)

ATGGCTGGTTCTGTGTGTCCTAATGGTGGTAAAGAATGCCACTATAGACATGCTCTTCCTCCAGGATATGTTTTAAAGTCACAAATGAAGGAACTGTTGGAAGAGGAGAGCCAAAAGATTGCCATAGAGGAAGAAATTGAGAATGAGCGTGCAAAAGTCAAGACCACTACTCCCATAACTCCGGAGCTTTTCTTTCAATGGAAGAAGAAAAAGATGGATGAAAGAAATGCTGGTTTGGCTGCACAACAAGCAGAGAGAGCTAAGAATGATCGCATGAGTGGTCGGGAGTTGTTTCTTGCAAATGCAAGCTTGTTTGTGGACGATGCTGAGGCATACGAAAAATATCAGCGAGAAGAAGAACCTGAAGCTGACGAATCAAAGGCCAAGGATAATTCAACTGGTGGACCGAGTACCTCAACAAATGCTGTTGATGATTCTGAAGACGATCTTTTGGATGAAGACGATGATGACGAACTGGATCTTGACGAGCTAAACGAACTTGAGGCAACTTTGTCTAGAACTTCAATTCAGATTCGGGAGCCAGGTATCGAGGCCTCTTGA

Protein sequence

MAGSVCPNGGKECHYRHALPPGYVLKSQMKELLEEESQKIAIEEEIENERAKVKTTTPITPELFFQWKKKKMDERNAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEEPEADESKAKDNSTGGPSTSTNAVDDSEDDLLDEDDDDELDLDELNELEATLSRTSIQIREPGIEAS

Homology

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BLAST of CsGy5G006300 vs. NCBI nr
Match: XP_004143604.1 (PREDICTED: zinc finger CCCH domain-containing protein 11 [Cucumis sativus] >KGN50477.1 hypothetical protein Csa_5G175990 [Cucumis sativus])

HSP 1 Score: 296.2 bits (757), Expect = 7.8e-77
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 5   VCPNGGKECHYRHALPPGYVLKSQMKELLEEESQKIAIEEEIENERAKVKTTTPITPELF 64
           VCPNGGKECHYRHALPPGYVLKSQMKELLEEESQKIAIEEEIENERAKVKTTTPITPELF
Sbjct: 181 VCPNGGKECHYRHALPPGYVLKSQMKELLEEESQKIAIEEEIENERAKVKTTTPITPELF 240

Query: 65  FQWKKKKMDERNAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEEPEAD 124
           FQWKKKKMDERNAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEEPEAD
Sbjct: 241 FQWKKKKMDERNAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEEPEAD 300

Query: 125 ESKAKDNSTGGPSTSTNAVDXXXXXXXXXXXXXXXXXXXXXXXXATLSRTSIQIREPGIE 184
           ESKAKDNSTGGPSTSTNAVDXXXXXXXXXXXXXXXXXXXXXXXXATLSRTSIQIREPGIE
Sbjct: 301 ESKAKDNSTGGPSTSTNAVDXXXXXXXXXXXXXXXXXXXXXXXXATLSRTSIQIREPGIE 360

Query: 185 AS 187
           AS
Sbjct: 361 AS 362

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BLAST of CsGy5G006300 vs. NCBI nr
Match: XP_008445838.1 (PREDICTED: zinc finger CCCH domain-containing protein 11 [Cucumis melo])

HSP 1 Score: 296.2 bits (757), Expect = 7.8e-77
Identity = 169/182 (92.86%), Postives = 169/182 (92.86%), Query Frame = 0


Query: 5   VCPNGGKECHYRHALPPGYVLKSQMKELLEEESQKIAIEEEIENERAKVKTTTPITPELF 64
           VCPNGGKECHYRHALPPGYVLKSQMKELLEEESQKIAIEEEIENERAKVKTTTPITPELF
Sbjct: 181 VCPNGGKECHYRHALPPGYVLKSQMKELLEEESQKIAIEEEIENERAKVKTTTPITPELF 240

Query: 65  FQWKKKKMDERNAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEEPEAD 124
           FQWKKKKMDERNAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEEPEAD
Sbjct: 241 FQWKKKKMDERNAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEEPEAD 300

Query: 125 ESKAKDNSTGGPSTSTNAVDXXXXXXXXXXXXXXXXXXXXXXXXATLSRTSIQIREPGIE 184
           ESKAKDNSTGGPSTSTNAVD    XXXXXXXXXXX         ATLSRTSIQIREPGIE
Sbjct: 301 ESKAKDNSTGGPSTSTNAVDDSEDXXXXXXXXXXXDLDELNELEATLSRTSIQIREPGIE 360

Query: 185 AS 187
           AS
Sbjct: 361 AS 362

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BLAST of CsGy5G006300 vs. NCBI nr
Match: XP_022957419.1 (zinc finger CCCH domain-containing protein 11-like [Cucurbita moschata])

HSP 1 Score: 282.7 bits (722), Expect = 8.9e-73
Identity = 163/182 (89.56%), Postives = 170/182 (93.41%), Query Frame = 0


Query: 5   VCPNGGKECHYRHALPPGYVLKSQMKELLEEESQKIAIEEEIENERAKVKTTTPITPELF 64
           VCPNGGK+CHYRHALPPGYVLKSQMKELLEEESQK+AIEEEIENERAKVKTTTPITPELF
Sbjct: 180 VCPNGGKDCHYRHALPPGYVLKSQMKELLEEESQKLAIEEEIENERAKVKTTTPITPELF 239

Query: 65  FQWKKKKMDERNAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEEPEAD 124
           FQWKKKKMDER+AGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEEPEAD
Sbjct: 240 FQWKKKKMDERDAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEEPEAD 299

Query: 125 ESKAKDNSTGGPSTSTNAVDXXXXXXXXXXXXXXXXXXXXXXXXATLSRTSIQIREPGIE 184
           E KAKDN+TGGPSTST+A+D    XXXXXXXXXXXXXX      A+LSRTSIQI EPGIE
Sbjct: 300 EPKAKDNATGGPSTSTSAIDDSEDXXXXXXXXXXXXXXELNELEASLSRTSIQIGEPGIE 359

Query: 185 AS 187
           AS
Sbjct: 360 AS 361

[Close]

BLAST of CsGy5G006300 vs. NCBI nr
Match: XP_022989076.1 (zinc finger CCCH domain-containing protein 11-like [Cucurbita maxima])

HSP 1 Score: 282.3 bits (721), Expect = 1.2e-72
Identity = 162/182 (89.01%), Postives = 167/182 (91.76%), Query Frame = 0


Query: 5   VCPNGGKECHYRHALPPGYVLKSQMKELLEEESQKIAIEEEIENERAKVKTTTPITPELF 64
           VCPNGGK+CHYRHALPPGYVLKSQMKELLEEESQK+AIEEEIENERAKVKTTTPITPELF
Sbjct: 180 VCPNGGKDCHYRHALPPGYVLKSQMKELLEEESQKLAIEEEIENERAKVKTTTPITPELF 239

Query: 65  FQWKKKKMDERNAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEEPEAD 124
           FQWKKKKMDER+AGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEEPEAD
Sbjct: 240 FQWKKKKMDERDAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEEPEAD 299

Query: 125 ESKAKDNSTGGPSTSTNAVDXXXXXXXXXXXXXXXXXXXXXXXXATLSRTSIQIREPGIE 184
           E KAKDN TGGPSTST+AVD    XXXXXXXXXXXX        A+LSRTSIQI EPGIE
Sbjct: 300 EPKAKDNPTGGPSTSTSAVDDSEDXXXXXXXXXXXXLDELNELEASLSRTSIQIGEPGIE 359

Query: 185 AS 187
           AS
Sbjct: 360 AS 361

[Close]

BLAST of CsGy5G006300 vs. NCBI nr
Match: XP_022139056.1 (zinc finger CCCH domain-containing protein 11 [Momordica charantia])

HSP 1 Score: 262.7 bits (670), Expect = 9.5e-67
Identity = 160/182 (87.91%), Postives = 167/182 (91.76%), Query Frame = 0


Query: 5   VCPNGGKECHYRHALPPGYVLKSQMKELLEEESQKIAIEEEIENERAKVKTTTPITPELF 64
           VCPNGGK+C YRHALPPGYVLKSQMK LLEEESQK+AIEEEIENERAKVKTTTP+TPELF
Sbjct: 181 VCPNGGKDCQYRHALPPGYVLKSQMKALLEEESQKLAIEEEIENERAKVKTTTPMTPELF 240

Query: 65  FQWKKKKMDERNAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEEPEAD 124
           FQWKKKKMDER+AGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEE +A+
Sbjct: 241 FQWKKKKMDERDAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEESDAN 300

Query: 125 ESKAKDNSTGGPSTSTNAVDXXXXXXXXXXXXXXXXXXXXXXXXATLSRTSIQIREPGIE 184
           E KAKDNSTGGPST      XXXXXXXXXXXXXXXXXXX     A+LSRTSIQIREPGIE
Sbjct: 301 EPKAKDNSTGGPSTXXXXXXXXXXXXXXXXXXXXXXXXXLNELEASLSRTSIQIREPGIE 360

Query: 185 AS 187
           AS
Sbjct: 361 AS 362

[Close]

BLAST of CsGy5G006300 vs. TAIR10
Match: AT2G20280.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 177.6 bits (449), Expect = 7.3e-45
Identity = 89/111 (80.18%), Postives = 102/111 (91.89%), Query Frame = 0


Query: 6   CPNGGKECHYRHALPPGYVLKSQMKELLEEE-SQKIAIEEEIENERAKVKTTTPITPELF 65
           CPNGGKECHYRHALPPGYVLKSQMK LLEEE S+K+A+E+EIENERAK++T T +TP LF
Sbjct: 183 CPNGGKECHYRHALPPGYVLKSQMKALLEEESSKKLAVEDEIENERAKLQTATQMTPALF 242

Query: 66  FQWKKKKMDERNAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKY 116
            +WK+KK+ ER+AGLAA QAERAKNDRMSGRELFL+NASLFVDDAEA E+Y
Sbjct: 243 MEWKRKKIAERDAGLAASQAERAKNDRMSGRELFLSNASLFVDDAEACEEY 293

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BLAST of CsGy5G006300 vs. Swiss-Prot
Match: sp|Q0JHZ2|C3H11_ORYSJ (Zinc finger CCCH domain-containing protein 11 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0834700 PE=2 SV=2)

HSP 1 Score: 184.5 bits (467), Expect = 1.1e-45
Identity = 122/179 (68.16%), Postives = 141/179 (78.77%), Query Frame = 0


Query: 5   VCPNGGKECHYRHALPPGYVLKSQMKELLEEESQKIAIEEEIENERAKVKTTTPITPELF 64
           VCPNGGK+CHYRHALPPGYVLKSQMK LLEEES+KIAIE+EIE++R KVKTTTP+T +LF
Sbjct: 183 VCPNGGKDCHYRHALPPGYVLKSQMKALLEEESEKIAIEDEIEDQRKKVKTTTPMTTDLF 242

Query: 65  FQWKKKKMDERNAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEE-PEA 124
            +WK+KK +ER AGLAA +AERAKNDRMSGRELF+A++S+FVDDAEAY+ Y+R+EE    
Sbjct: 243 MEWKRKKAEEREAGLAALRAERAKNDRMSGRELFMADSSVFVDDAEAYDVYERQEEXXXX 302

Query: 125 DESKAKDNSTGGPSTSTNAVDXXXXXXXXXXXXXXXXXXXXXXXXATLSRTSIQIREPG 183
                                XXXXXXXXXXXXXXXXXXX     A+LSRTSIQIREPG
Sbjct: 303 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNELEASLSRTSIQIREPG 361

[Close]

BLAST of CsGy5G006300 vs. Swiss-Prot
Match: sp|Q9SK74|C3H21_ARATH (Zinc finger CCCH domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=At2g20280 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.3e-43
Identity = 89/111 (80.18%), Postives = 102/111 (91.89%), Query Frame = 0


Query: 6   CPNGGKECHYRHALPPGYVLKSQMKELLEEE-SQKIAIEEEIENERAKVKTTTPITPELF 65
           CPNGGKECHYRHALPPGYVLKSQMK LLEEE S+K+A+E+EIENERAK++T T +TP LF
Sbjct: 183 CPNGGKECHYRHALPPGYVLKSQMKALLEEESSKKLAVEDEIENERAKLQTATQMTPALF 242

Query: 66  FQWKKKKMDERNAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKY 116
            +WK+KK+ ER+AGLAA QAERAKNDRMSGRELFL+NASLFVDDAEA E+Y
Sbjct: 243 MEWKRKKIAERDAGLAASQAERAKNDRMSGRELFLSNASLFVDDAEACEEY 293

[Close]

BLAST of CsGy5G006300 vs. Swiss-Prot
Match: sp|Q54DA5|ZC3HF_DICDI (Zinc finger CCCH domain-containing protein 15 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0292410 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.2e-17
Identity = 57/131 (43.51%), Postives = 78/131 (59.54%), Query Frame = 0


Query: 6   CPNGGKECHYRHALPPGYVLKSQMKELLEEESQKIAIEEEIENERAKVKTTTPITPELFF 65
           CPNGG++C Y+H LP GY LK + K   E+E ++I IEE IE ERAK+  +TP+T E F 
Sbjct: 191 CPNGGEKCAYQHCLPEGYQLKKK-KSREEDEVEEIPIEELIEEERAKLTKSTPVTLETFL 250

Query: 66  QWK-KKKMDERNAGLAAQQAE----RAKNDRMSGRELFLANASLFVDDAEAYEKYQREEE 125
           +WK +K++ +  A   AQ       +A    MSGRE+F+ N  LFVDD  A +   +E E
Sbjct: 251 RWKEEKRLQKEKAAKDAQDKRLADIKAGKTSMSGREMFVFNPDLFVDDESAIDTKSKEYE 310

Query: 126 PEADESKAKDN 132
              +E  A  N
Sbjct: 311 KSEEEIAALAN 320

[Close]

BLAST of CsGy5G006300 vs. Swiss-Prot
Match: sp|Q7JWR9|ZC3HF_DROME (Zinc finger CCCH domain-containing protein 15 homolog OS=Drosophila melanogaster OX=7227 GN=CG8635 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.9e-13
Identity = 58/131 (44.27%), Postives = 79/131 (60.31%), Query Frame = 0


Query: 6   CPNGGKECHYRHALPPGYVLKSQMKELLEEESQKIAIEEEIENERAKV-KTTTPITPELF 65
           CPNGGK C YRHALP GYVLK   K+  EE+  +I++ + IE ERA +    T +T E F
Sbjct: 189 CPNGGK-CIYRHALPAGYVLKRDKKK--EEKPTEISLVDLIEKERAALGPNQTRVTLESF 248

Query: 66  FQWKKKKMDERNAGLAAQQAERAKND-------RMSGRELFLANASLFVDDA------EA 123
             WKK+K+ E+ A LAA++ ER K+D        +SGRE+F  N  L VDD        A
Sbjct: 249 LAWKKRKIAEKKAKLAAEE-ERKKSDFSKGKQFGISGREMFSFNPDL-VDDGPMEEGDAA 308

[Close]

BLAST of CsGy5G006300 vs. Swiss-Prot
Match: sp|Q28Y69|ZC3HF_DROPS (Zinc finger CCCH domain-containing protein 15 homolog OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=GA21225 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.1e-13
Identity = 59/153 (38.56%), Postives = 87/153 (56.86%), Query Frame = 0


Query: 6   CPNGGKECHYRHALPPGYVLKSQMKELLEEESQKIAIEEEIENERAKV-KTTTPITPELF 65
           CPNG K C YRHALPPGYVLK   K+  E++  +I++ + IE ERA +    T +T E F
Sbjct: 190 CPNGEK-CIYRHALPPGYVLKRDKKK--EDKPTEISLVDLIEKERAALGSNQTRVTLETF 249

Query: 66  FQWKKKKMDERNAGLAAQQAERAKND-------RMSGRELFLANASLFVDDA------EA 125
             WKK+K+ E+ A + A++ ER K+D        +SGRE+F  N  L VDD        A
Sbjct: 250 LAWKKRKLQEKKAKMVAEE-ERKKSDFSKGKQFGISGREMFSFNPDL-VDDGPIEEGDAA 309

Query: 126 YEKYQREEEPEADESKAKDNSTGGPSTSTNAVD 145
           ++ Y+RE++ + +  + K+      S +   VD
Sbjct: 310 FDVYKREDDDDDNAFEFKELDLAALSLAAKEVD 337

[Close]

BLAST of CsGy5G006300 vs. TrEMBL
Match: tr|A0A1S3BDM3|A0A1S3BDM3_CUCME (zinc finger CCCH domain-containing protein 11 OS=Cucumis melo OX=3656 GN=LOC103488739 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 5.1e-77
Identity = 169/182 (92.86%), Postives = 169/182 (92.86%), Query Frame = 0


Query: 5   VCPNGGKECHYRHALPPGYVLKSQMKELLEEESQKIAIEEEIENERAKVKTTTPITPELF 64
           VCPNGGKECHYRHALPPGYVLKSQMKELLEEESQKIAIEEEIENERAKVKTTTPITPELF
Sbjct: 181 VCPNGGKECHYRHALPPGYVLKSQMKELLEEESQKIAIEEEIENERAKVKTTTPITPELF 240

Query: 65  FQWKKKKMDERNAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEEPEAD 124
           FQWKKKKMDERNAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEEPEAD
Sbjct: 241 FQWKKKKMDERNAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEEPEAD 300

Query: 125 ESKAKDNSTGGPSTSTNAVDXXXXXXXXXXXXXXXXXXXXXXXXATLSRTSIQIREPGIE 184
           ESKAKDNSTGGPSTSTNAVD    XXXXXXXXXXX         ATLSRTSIQIREPGIE
Sbjct: 301 ESKAKDNSTGGPSTSTNAVDDSEDXXXXXXXXXXXDLDELNELEATLSRTSIQIREPGIE 360

Query: 185 AS 187
           AS
Sbjct: 361 AS 362

[Close]

BLAST of CsGy5G006300 vs. TrEMBL
Match: tr|A0A0A0KQ23|A0A0A0KQ23_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175990 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 5.1e-77
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 5   VCPNGGKECHYRHALPPGYVLKSQMKELLEEESQKIAIEEEIENERAKVKTTTPITPELF 64
           VCPNGGKECHYRHALPPGYVLKSQMKELLEEESQKIAIEEEIENERAKVKTTTPITPELF
Sbjct: 181 VCPNGGKECHYRHALPPGYVLKSQMKELLEEESQKIAIEEEIENERAKVKTTTPITPELF 240

Query: 65  FQWKKKKMDERNAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEEPEAD 124
           FQWKKKKMDERNAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEEPEAD
Sbjct: 241 FQWKKKKMDERNAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEEPEAD 300

Query: 125 ESKAKDNSTGGPSTSTNAVDXXXXXXXXXXXXXXXXXXXXXXXXATLSRTSIQIREPGIE 184
           ESKAKDNSTGGPSTSTNAVDXXXXXXXXXXXXXXXXXXXXXXXXATLSRTSIQIREPGIE
Sbjct: 301 ESKAKDNSTGGPSTSTNAVDXXXXXXXXXXXXXXXXXXXXXXXXATLSRTSIQIREPGIE 360

Query: 185 AS 187
           AS
Sbjct: 361 AS 362

[Close]

BLAST of CsGy5G006300 vs. TrEMBL
Match: tr|A0A2I4FB05|A0A2I4FB05_9ROSI (zinc finger CCCH domain-containing protein 11-like OS=Juglans regia OX=51240 GN=LOC108997138 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 5.7e-60
Identity = 132/183 (72.13%), Postives = 145/183 (79.23%), Query Frame = 0


Query: 5   VCPNGGKECHYRHALPPGYVLKSQMKELLEEESQKIAIEEEIENERAKVKTTTPITPELF 64
           VCPNGGK+CHYRHALPPGYVLKSQMK LLEEE++KI IEEEIEN+RAKV  +TP+T ELF
Sbjct: 180 VCPNGGKDCHYRHALPPGYVLKSQMKALLEEETEKITIEEEIENQRAKVTGSTPMTTELF 239

Query: 65  FQWKKKKMDERNAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEEPEAD 124
           F+WKKKKM+ER+AGLAAQQAERAKNDRMSGRELFL++ASLFVDDAEAYEKYQREEE EA 
Sbjct: 240 FEWKKKKMEERDAGLAAQQAERAKNDRMSGRELFLSDASLFVDDAEAYEKYQREEELEAA 299

Query: 125 ESKAKDNSTGG-PSTSTNAVDXXXXXXXXXXXXXXXXXXXXXXXXATLSRTSIQIREPGI 184
           E K KDNS  G PSTS NAV                         A+LSRTSIQIREPG+
Sbjct: 300 EQKVKDNSAAGQPSTSANAV--ADPEEDPIDDDDELDMDELNELEASLSRTSIQIREPGV 359

Query: 185 EAS 187
           EAS
Sbjct: 360 EAS 360

[Close]

BLAST of CsGy5G006300 vs. TrEMBL
Match: tr|A0A2P4MP89|A0A2P4MP89_QUESU (Zinc finger ccch domain-containing protein 11 OS=Quercus suber OX=58331 GN=CFP56_17723 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.7e-59
Identity = 153/182 (84.07%), Postives = 166/182 (91.21%), Query Frame = 0


Query: 6   CPNGGKECHYRHALPPGYVLKSQMKELLEEESQKIAIEEEIENERAKVKTTTPITPELFF 65
           CPNGGKECHYRHALPPGY+LKSQMK LLEEES KI IEEEIEN+RAKV TTTP+TP+LFF
Sbjct: 183 CPNGGKECHYRHALPPGYILKSQMKALLEEESDKIPIEEEIENQRAKVTTTTPMTPDLFF 242

Query: 66  QWKKKKMDERNAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEEPEADE 125
           QWK KK +ER AGLAAQ+A+RAKNDRMSGRELFLA+ASLFVDDAEAYEKYQREE+  A E
Sbjct: 243 QWKNKKTEEREAGLAAQRADRAKNDRMSGRELFLADASLFVDDAEAYEKYQREEQLVAAE 302

Query: 126 SKAKDNSTGG-PSTSTNAVDXXXXXXXXXXXXXXXXXXXXXXXXATLSRTSIQIREPGIE 185
            K KD+ T G PSTSTN V+XXXXXXXXXXXXXXXXXXXXXXXXA+LS+TSIQIREPGIE
Sbjct: 303 EKVKDDLTAGEPSTSTNTVNXXXXXXXXXXXXXXXXXXXXXXXXASLSKTSIQIREPGIE 362

Query: 186 AS 187
           AS
Sbjct: 363 AS 364

[Close]

BLAST of CsGy5G006300 vs. TrEMBL
Match: tr|A0A2R6RTT9|A0A2R6RTT9_ACTCH (Zinc finger CCCH domain-containing protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc03831 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 4.8e-59
Identity = 144/184 (78.26%), Postives = 160/184 (86.96%), Query Frame = 0


Query: 6   CPNGGKECHYRHALPPGYVLKSQMKELLEEESQKIAIEEEIENERAKVKTTTPITPELFF 65
           CPNGGK+CHYRHALPPGYVLKSQMK LLEEE++K+ IEEEIEN+RAKV TTTP+T ELF 
Sbjct: 181 CPNGGKDCHYRHALPPGYVLKSQMKTLLEEEAEKMPIEEEIENQRAKVTTTTPMTTELFV 240

Query: 66  QWKKKKMDERNAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEEPEADE 125
           QWKKKKMDER AGLAAQ+AERAKNDRMSGRELFL+++SLFVDDAEAYEKYQRE EP+A E
Sbjct: 241 QWKKKKMDEREAGLAAQRAERAKNDRMSGRELFLSDSSLFVDDAEAYEKYQREAEPDATE 300

Query: 126 SKAKDNSTGGPSTSTNA---VDXXXXXXXXXXXXXXXXXXXXXXXXATLSRTSIQIREPG 185
            K ++N  GGPSTST A   +D   XXXXXXXXXXXXXXXXX    A+LSRTSIQI+EPG
Sbjct: 301 QKVQENPAGGPSTSTCAAADLDSEDXXXXXXXXXXXXXXXXXNELEASLSRTSIQIKEPG 360

Query: 186 IEAS 187
           IE S
Sbjct: 361 IETS 364

The following BLAST results are available for this feature:

BLAST of CsGy5G006300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143604.1	7.8e-77	100.00	PREDICTED: zinc finger CCCH domain-containing protein 11 [Cucumis sativus] >KGN5...	[more]
XP_008445838.1	7.8e-77	92.86	PREDICTED: zinc finger CCCH domain-containing protein 11 [Cucumis melo]	[more]
XP_022957419.1	8.9e-73	89.56	zinc finger CCCH domain-containing protein 11-like [Cucurbita moschata]	[more]
XP_022989076.1	1.2e-72	89.01	zinc finger CCCH domain-containing protein 11-like [Cucurbita maxima]	[more]
XP_022139056.1	9.5e-67	87.91	zinc finger CCCH domain-containing protein 11 [Momordica charantia]	[more]

BLAST of CsGy5G006300 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20280.1	7.3e-45	80.18	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

BLAST of CsGy5G006300 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q0JHZ2\|C3H11_ORYSJ	1.1e-45	68.16	Zinc finger CCCH domain-containing protein 11 OS=Oryza sativa subsp. japonica OX...	[more]
sp\|Q9SK74\|C3H21_ARATH	1.3e-43	80.18	Zinc finger CCCH domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|Q54DA5\|ZC3HF_DICDI	1.2e-17	43.51	Zinc finger CCCH domain-containing protein 15 homolog OS=Dictyostelium discoideu...	[more]
sp\|Q7JWR9\|ZC3HF_DROME	1.9e-13	44.27	Zinc finger CCCH domain-containing protein 15 homolog OS=Drosophila melanogaster...	[more]
sp\|Q28Y69\|ZC3HF_DROPS	4.1e-13	38.56	Zinc finger CCCH domain-containing protein 15 homolog OS=Drosophila pseudoobscur...	[more]

BLAST of CsGy5G006300 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BDM3\|A0A1S3BDM3_CUCME	5.1e-77	92.86	zinc finger CCCH domain-containing protein 11 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
tr\|A0A0A0KQ23\|A0A0A0KQ23_CUCSA	5.1e-77	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175990 PE=4 SV=1	[more]
tr\|A0A2I4FB05\|A0A2I4FB05_9ROSI	5.7e-60	72.13	zinc finger CCCH domain-containing protein 11-like OS=Juglans regia OX=51240 GN=...	[more]
tr\|A0A2P4MP89\|A0A2P4MP89_QUESU	1.7e-59	84.07	Zinc finger ccch domain-containing protein 11 OS=Quercus suber OX=58331 GN=CFP56...	[more]
tr\|A0A2R6RTT9\|A0A2R6RTT9_ACTCH	4.8e-59	78.26	Zinc finger CCCH domain-containing protein OS=Actinidia chinensis var. chinensis...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR000571	Znf_CCCH
IPR032378	ZC3H15/TMA46_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G006300.1	CsGy5G006300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 25..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..129
None	No IPR available	PANTHER	PTHR12681	ZINC FINGER-CONTAINING PROTEIN P48ZNF	coord: 5..166
IPR032378	ZC3H15/TMA46 family, C-terminal	PFAM	PF16543	DFRP_C	coord: 39..122 e-value: 4.7E-20 score: 71.8
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 1..20 score: 9.019

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G006300	Cla020082	Watermelon (97103) v1	cgybwmB401
CsGy5G006300	Csa5G175990	Cucumber (Chinese Long) v2	cgybcuB224
CsGy5G006300	MELO3C011721	Melon (DHL92) v3.5.1	cgybmeB310
CsGy5G006300	ClCG02G013800	Watermelon (Charleston Gray)	cgybwcgB347
CsGy5G006300	CSPI05G08940	Wild cucumber (PI 183967)	cgybcpiB226
CsGy5G006300	CmaCh04G012350	Cucurbita maxima (Rimu)	cgybcmaB673
CsGy5G006300	CmaCh04G002600	Cucurbita maxima (Rimu)	cgybcmaB674
CsGy5G006300	CmoCh04G013090	Cucurbita moschata (Rifu)	cgybcmoB651
CsGy5G006300	CmoCh04G002680	Cucurbita moschata (Rifu)	cgybcmoB652
CsGy5G006300	Lsi04G008220	Bottle gourd (USVL1VR-Ls)	cgyblsiB331
CsGy5G006300	Cp4.1LG01g04450	Cucurbita pepo (Zucchini)	cgybcpeB647
CsGy5G006300	Cp4.1LG01g10300	Cucurbita pepo (Zucchini)	cgybcpeB646
CsGy5G006300	MELO3C011721.2	Melon (DHL92) v3.6.1	cgybmedB310
CsGy5G006300	CsaV3_5G006370	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G006300	Cla97C02G039450	Watermelon (97103) v2	cgybwmbB351
CsGy5G006300	Bhi07G000867	Wax gourd	cgybwgoB488
CsGy5G006300	Carg02072	Silver-seed gourd	carcgybB0832
CsGy5G006300	Carg23760	Silver-seed gourd	carcgybB0854

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G006300	Cucumber (Chinese Long) v3	cgybcucB220
CsGy5G006300	Cucumber (Chinese Long) v3	cgybcucB226
CsGy5G006300	Cucumber (Chinese Long) v3	cgybcucB234
CsGy5G006300	Watermelon (97103) v2	cgybwmbB335
CsGy5G006300	Watermelon (97103) v2	cgybwmbB358
CsGy5G006300	Wax gourd	cgybwgoB408
CsGy5G006300	Wax gourd	cgybwgoB471
CsGy5G006300	Cucumber (Gy14) v2	cgybcgybB123
CsGy5G006300	Cucumber (Gy14) v2	cgybcgybB095
CsGy5G006300	Cucumber (Gy14) v2	cgybcgybB144
CsGy5G006300	Cucumber (Chinese Long) v2	cgybcuB218
CsGy5G006300	Melon (DHL92) v3.6.1	cgybmedB345