Cp4.1LG01g04450 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAGGACAAGATCGTCATTTAATCATAACAAAGCGAAATCTGTCTTCCGCATCCATCCTCTCTTCTCCAGGTTGTAGAGGAAAGGCTCTGATAAATCTGTTCGTACAAACCCTAATTATCCGAACATCGTCTGTAATTAAACAAAATTTCTGCTTCTCGATATCTATTTATCTTCGATTTTCGTTGTGTTTTTGGCTTCCGATCGACTTTGAATGCGAAATAAGCATGCCGCCGAAGCAAGCGAAGGCCGACTTAGCGAAGAAGCAGAAGGTCGTTGAGGACAAGACGTTTGGTCTGAAGAACAAGAATAAGAGCAAAAACGTTCAGAAATATGTTCAGAATCTCAAGCAAGCTGTCCAGCCAAAAGTCGACCCGAAAGTAGCTGCCAAGGTCCGGGTTTCTGCTTCATTTTTAACGAACTTTAGTCTTTCGGTCAATCATGGGGAAGTTATGAATTAATGATGAATTTGATTTTTTGTGGGAACGAGAAGAAGCTGATTATTATTATTTTTTTATGGTATTGTGCAGAAAAAGAAGGAGGAAGAAAAAGCTAAAGAGAAGGAGTTGAATGACTTGTTTAAGATTGCCGTTAGTCAGCCAAAAGTACCCGTTGGTATGTGCATTTTATTACATTTCGTCTTTGGTTTTAGTTGGGTTTTGTTGTTTGTTTCGAAGCCTTCGCATTGAACTGATGTGATAATTGGTAATTTGGTTAGGTGTTGATCCCAAGTCCATAGTTTGTGAGTATTTTAAAGTGGGGCAATGTACGAAAGGTTTTAAATGCAAGTTTTCTCATGATTTGAATGTCCAGAGGAAGGGTGAAAAGATTGATATTTATAGCGATAAGCGTGATGAAGGTGAGTGACTAACATTTTTGTTTTCTGAAAATCACCAAGTTTTCATTTCATAGCTTCTTATGATTACTATCTGATTAAAATTCTTCATGGCCAATGGTTTTCCTTAGAAACGATGGAGGATTGGGATCAAGAAACATTGGAGAAGGTCGTCGAATCAAAGAAGAATGAGTATAAACTCAATAAACCAACTGAGATTGTATGTTTCTCATGTCCCCTTCGTAGCTTTCTTACGTTAAATTGAAGTATCTAAGTTTGTTAGTTCTGACACCTTAACTCTAATATGCAATCCCTATATCTATCATTCTTTCTTTAGATCATAACATTCTTACATCCTTCTGGATGGTAAAAGTATCACACCGTTTGTTGAAAAGGCTTATGCCGTCATGAGAATGCATTGAAGTTCTTACACCTTGTGAATTGACTAGAAGAAATATGAATTTGTTGTATTCTTAAAAAACTTTGAAGTTCACTTGAGTATTTGGCTATATTCATGGCCTTCTCATTTTGTTTTTGGGCTTACACCTCGCTTCTTCAAGGCATTGCCTTGAGCCATGTTTATGTATTAAATGGAACCTAATACATTTCCTTGTGGCTATATTTTCGGGAATCTAATCTCCCATGAATTAAAAGTTAAGGGGATTTAATAATTGGGTGTGCGCCTGTTTAATGTATGCATGCACTGGGATTTTTTATCAACTTATAATTTGATGGTCTAAGGATTGGTCCAGGAAGAACTGTTCTTGATGTGCTTCTTACTGTAGAAATGAAGCTTGCTGGTCTCATAATTGGTAATGCTTAATTTTAGAATTATTATTTATGAACTTCTGTTTTCAACACATAGAGCATGTTCCAGTCTCCAGTAACTGATTTATGTCGGTTATCTTGGATTGGCATGCGATTTTCTGGAAAACTGAATATTTCTTGCTATAGTTGGTCCAAAGTTGATATAATGTTTATTATCCTATTTTAACTATCTGTTTGAAATGAATAATTTACAGGTCTGCAAGTATTTTCTGGAGGCAGTAGAAAAGAAGCAGTATGGCTGGTTCTGGGTGTGTCCTAATGGTGGAAAAGATTGCCACTATAGACATGCTCTTCCTCCAGGATATATTTTGAAGTCACAAATGAAGGAACTGCTCGAAGAGGAGAGTCAAAAGATTGCCATAGAGGAAGAGATTGAGAATGAGGTGAGGATGATTCAAATTCATTGTTTATGGTCCTTATGGTTTTGATTTTCCTTTTTGCGTTTAAACCAAATAAAGAAAGTGCTTAAAAAAAAATTAAAATGCTTGAAAAAAATTAAAATGCTTGAAAAAATTTACCGCCTTTGGGGCCTCAATTCCTATCTTTTTACCTTTTCTTTTTACTATGTTTATTTGCTTATTCCAGCGTGCAAAAGTTAAAACCACTACTCCCATTACTCCGGAGCTTTTCTTTCAATGGAAGAAGAAAAAGATGGATGAAAGAGATGCTGGTTTGGCCGCACAACAAGCAGAGAGAGCTAAGAATGACCGCATGAGGTTTCTACATTACTCATATAGTTAATTTTACTTGTAAAGGTAATTAATAGTCATATAAGTTCCATTTTGTTCTTCAGTGGTCGGGAGTTGTTTCTTGCAAATGCAAGCTTGTTTGTGGATGACGCCGAGGCGTATGAAAAATATCAGCGAGAAGAACCTGAAGCTGACGATGAACAAAAGGTAATTCTATGTGTGAAATTCGTACAGATTGCTTGTTGCTTCAGTCATTTGCGATTCTGGTTCATGAGTTATGCTGAACAGTTTGTTCATGGCCGTGTCCTTAGTTTACATCATTACCTTGCCAGTCAAATTTCCTTCCATGCTGTCTGGTTAATGAGTTTTCTATCCCTTTATGCCCTCTATTTTTCTTGTCTTTCTGTAGTGTCTTCTCCTCCTCACTCTCTGGTTCAACAAGAATGTTATTGATCCAAAAAGAAATAAGAAAAGGAGTACAAGTAATTCTAGTCCACTAAGAGACCAAGAGGGATGACTGAACTGCTCTCTAGTTGTTTAATATTAAATAGTGAAATTACAAGAAAACCTTTTTGAGGTTTCACTACTTTGAGGCTTAAAACTAGTTAAAATCCTAACTCTAACCCATACGGATTGAATAATTCTTTTTTCTCCCCCAAAGATAGACACCATCATATAGCTGTGTAAGCCCATTCATATAAAGGCTTCAACTTGGTTAATTGAACAAACTATATCAGTAGAATTCGCCGGATCCCACCATTTGAAGTTACAAAAATTGAAGAATCTCCATATTCTTTCAGAAGAAGGGGAGTAGCATAAGTGGTGTGTTTGGTTTTCATTATATTTGTTGCAAAGAGCTCACCAGCTTGGGAAATGCTTTGAACAGTGGTTGTTCTCCTAGCAATGGTCCACCAAGTATTTAACTTTCTACAAATTGCTGATAAAACAAAGACTTTCACCTTCTTAGGAGCTTTGAAGTTCCATAGTTCATTGGAGAATGATCTTGTAATAACCTCCAACTGCTTGGCAAGGCAGTCAAACAAAATCTTACTAGTGAAAGTCCTTGGTTTATCCAATTTCTGAATTCGGCTATTCTAACACACAAAAATCAATCTGTCGGTGAGGCTGGATCACCTCCACCTTTCTATAGATGAGGTTCCTCCTGAAATATTTTTCTAATATCTGCAAGTGTATTGGGTCAATTATGTGCACTTCGACTAATCTTACGGAAAAACTGCATTGCCTAGAAAATTTATAGGATTTTAAATCCTAGGAAGTAGCCACCATGATTTCTCTTGGCCATAACAAGCACTAGGCCTTGAATAGGAGATCTCAATTCTCAACCTCCAACCTCCATCTTCCAATCCAAGTGTGCTATCAATGATTGTACTTGTTAATTGGAAGTATGACAATCTACTCTATCCTCCCATTCTAATGAAATCTCTTAATCGTCCATCAATCTTATCAACCTTCGACAGAATCGTGAAGATGTGAGAGATGGTGAATTTCTAAAGCTTTCGAGTTCGAAGGTGTGCATGATTGATATAGCTTCTTTCAAAAGAATGCCTTCATTGATCTTTGTAGCTTCTCTGCCATTGTTCCCAAGATCTTATACCTAAAACTTATGAGACAGTAGGATTTCTTCGATGAGAAGACAATTATGCGGATACCCTTGCCCCACCTTGGATCTTCATTGATTACAAAATTGGTCCTAGATAGATAGCAGTTAGAGAAAGGAACCCTGTCCATAAAGCAACTCTTGAAGCTTCGATATACCAATCAAAGCTTTGTAGGCGTTCCTTCTCAAGACTCTTCATGTCTTTTGCATCTCAATCACTGTGAAAATCATTTGAGAGGGCAAGTCGTTGGAAAACGAAGCCTGCACTCAAGACTATTGTTAGCACCAAACAGGTCCCCCCTTGGCCTTCCATTCAGTGGGGGATAGATCTGGTAGGAGCATTCCCAATTAGCGGTTGGGCAAAAGCAGCATTCAATTATGGGCTTAAGATTAAAAGTTGTATCATTTATGAATAGTTATGTAGTCTAAGCATTCTACTTTTGGGGCATTAAGCTTCAAATATTCTTATATCCTTTTTTTTTTACCACGTGCAATTTCAGGCCAAGGATAATTCAACGGGTAGACCCACTACCTCAACAAGTGCTGTGGATGATTCTGAGGATGTTCTCTTGGATGATGACGACGACGACGAACTAGACCTTGACGAGCTGAACGAGCTCGAGGCAAGTTTATCTAGAACGTCAATTCAGATCCGGGAGCCAGGTATCGAGCCCTCTTGAGACATTTGTTCATTACTGCGGAGTATGTGTTTGTAATTTGGTAAAGAATTGAAGAACATAATGGATTTGAGTTTATGTTCTCTTATTTAGAAGGGGAATGACTCCAATGGTTGCCATATAACATATTCAAATTTTGACTCCATGTTCTTCTGTTTGCCCCTTTAGCCTCAGTGTAAACAAGCTATTACTGGTTTGCAATAATTTCAACTCTACTTATAATTGTGCTCG TGAGGACAAGATCGTCATTTAATCATAACAAAGCGAAATCTGTCTTCCGCATCCATCCTCTCTTCTCCAGGTTGTAGAGGAAAGGCTCTGATAAATCTGTTCGTACAAACCCTAATTATCCGAACATCGTCTGTAATTAAACAAAATTTCTGCTTCTCGATATCTATTTATCTTCGATTTTCGTTGTGTTTTTGGCTTCCGATCGACTTTGAATGCGAAATAAGCATGCCGCCGAAGCAAGCGAAGGCCGACTTAGCGAAGAAGCAGAAGGTCGTTGAGGACAAGACGTTTGGTCTGAAGAACAAGAATAAGAGCAAAAACGTTCAGAAATATGTTCAGAATCTCAAGCAAGCTGTCCAGCCAAAAGTCGACCCGAAAGTAGCTGCCAAGAAAAAGAAGGAGGAAGAAAAAGCTAAAGAGAAGGAGTTGAATGACTTGTTTAAGATTGCCGTTAGTCAGCCAAAAGTACCCGTTGGTGTTGATCCCAAGTCCATAGTTTGTGAGTATTTTAAAGTGGGGCAATGTACGAAAGGTTTTAAATGCAAGTTTTCTCATGATTTGAATGTCCAGAGGAAGGGTGAAAAGATTGATATTTATAGCGATAAGCGTGATGAAGAAACGATGGAGGATTGGGATCAAGAAACATTGGAGAAGGTCGTCGAATCAAAGAAGAATGAGTATAAACTCAATAAACCAACTGAGATTGTCTGCAAGTATTTTCTGGAGGCAGTAGAAAAGAAGCAGTATGGCTGGTTCTGGGTGTGTCCTAATGGTGGAAAAGATTGCCACTATAGACATGCTCTTCCTCCAGGATATATTTTGAAGTCACAAATGAAGGAACTGCTCGAAGAGGAGAGTCAAAAGATTGCCATAGAGGAAGAGATTGAGAATGAGCGTGCAAAAGTTAAAACCACTACTCCCATTACTCCGGAGCTTTTCTTTCAATGGAAGAAGAAAAAGATGGATGAAAGAGATGCTGGTTTGGCCGCACAACAAGCAGAGAGAGCTAAGAATGACCGCATGAGTGGTCGGGAGTTGTTTCTTGCAAATGCAAGCTTGTTTGTGGATGACGCCGAGGCGTATGAAAAATATCAGCGAGAAGAACCTGAAGCTGACGATGAACAAAAGGCCAAGGATAATTCAACGGGTAGACCCACTACCTCAACAAGTGCTGTGGATGATTCTGAGGATGTTCTCTTGGATGATGACGACGACGACGAACTAGACCTTGACGAGCTGAACGAGCTCGAGGCAAGTTTATCTAGAACGTCAATTCAGATCCGGGAGCCAGGTATCGAGCCCTCTTGAGACATTTGTTCATTACTGCGGAGTATGTGTTTGTAATTTGGTAAAGAATTGAAGAACATAATGGATTTGAGTTTATGTTCTCTTATTTAGAAGGGGAATGACTCCAATGGTTGCCATATAACATATTCAAATTTTGACTCCATGTTCTTCTGTTTGCCCCTTTAGCCTCAGTGTAAACAAGCTATTACTGGTTTGCAATAATTTCAACTCTACTTATAATTGTGCTCG ATGCCGCCGAAGCAAGCGAAGGCCGACTTAGCGAAGAAGCAGAAGGTCGTTGAGGACAAGACGTTTGGTCTGAAGAACAAGAATAAGAGCAAAAACGTTCAGAAATATGTTCAGAATCTCAAGCAAGCTGTCCAGCCAAAAGTCGACCCGAAAGTAGCTGCCAAGAAAAAGAAGGAGGAAGAAAAAGCTAAAGAGAAGGAGTTGAATGACTTGTTTAAGATTGCCGTTAGTCAGCCAAAAGTACCCGTTGGTGTTGATCCCAAGTCCATAGTTTGTGAGTATTTTAAAGTGGGGCAATGTACGAAAGGTTTTAAATGCAAGTTTTCTCATGATTTGAATGTCCAGAGGAAGGGTGAAAAGATTGATATTTATAGCGATAAGCGTGATGAAGAAACGATGGAGGATTGGGATCAAGAAACATTGGAGAAGGTCGTCGAATCAAAGAAGAATGAGTATAAACTCAATAAACCAACTGAGATTGTCTGCAAGTATTTTCTGGAGGCAGTAGAAAAGAAGCAGTATGGCTGGTTCTGGGTGTGTCCTAATGGTGGAAAAGATTGCCACTATAGACATGCTCTTCCTCCAGGATATATTTTGAAGTCACAAATGAAGGAACTGCTCGAAGAGGAGAGTCAAAAGATTGCCATAGAGGAAGAGATTGAGAATGAGCGTGCAAAAGTTAAAACCACTACTCCCATTACTCCGGAGCTTTTCTTTCAATGGAAGAAGAAAAAGATGGATGAAAGAGATGCTGGTTTGGCCGCACAACAAGCAGAGAGAGCTAAGAATGACCGCATGAGTGGTCGGGAGTTGTTTCTTGCAAATGCAAGCTTGTTTGTGGATGACGCCGAGGCGTATGAAAAATATCAGCGAGAAGAACCTGAAGCTGACGATGAACAAAAGGCCAAGGATAATTCAACGGGTAGACCCACTACCTCAACAAGTGCTGTGGATGATTCTGAGGATGTTCTCTTGGATGATGACGACGACGACGAACTAGACCTTGACGAGCTGAACGAGCTCGAGGCAAGTTTATCTAGAACGTCAATTCAGATCCGGGAGCCAGGTATCGAGCCCTCTTGA MPPKQAKADLAKKQKVVEDKTFGLKNKNKSKNVQKYVQNLKQAVQPKVDPKVAAKKKKEEEKAKEKELNDLFKIAVSQPKVPVGVDPKSIVCEYFKVGQCTKGFKCKFSHDLNVQRKGEKIDIYSDKRDEETMEDWDQETLEKVVESKKNEYKLNKPTEIVCKYFLEAVEKKQYGWFWVCPNGGKDCHYRHALPPGYILKSQMKELLEEESQKIAIEEEIENERAKVKTTTPITPELFFQWKKKKMDERDAGLAAQQAERAKNDRMSGRELFLANASLFVDDAEAYEKYQREEPEADDEQKAKDNSTGRPTTSTSAVDDSEDVLLDDDDDDELDLDELNELEASLSRTSIQIREPGIEPS
BLAST of Cp4.1LG01g04450 vs. Swiss-Prot
Match: C3H11_ORYSJ (Zinc finger CCCH domain-containing protein 11 OS=Oryza sativa subsp. japonica GN=Os01g0834700 PE=2 SV=2) HSP 1 Score: 532.3 bits (1370), Expect = 4.0e-150 Identity = 284/363 (78.24%), Postives = 322/363 (88.71%), Query Frame = 1
BLAST of Cp4.1LG01g04450 vs. Swiss-Prot
Match: C3H21_ARATH (Zinc finger CCCH domain-containing protein 21 OS=Arabidopsis thaliana GN=At2g20280 PE=3 SV=1) HSP 1 Score: 518.5 bits (1334), Expect = 6.0e-146 Identity = 280/372 (75.27%), Postives = 322/372 (86.56%), Query Frame = 1
BLAST of Cp4.1LG01g04450 vs. Swiss-Prot
Match: ZC3HF_DICDI (Zinc finger CCCH domain-containing protein 15 homolog OS=Dictyostelium discoideum GN=DDB_G0292410 PE=3 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 7.7e-69 Identity = 166/353 (47.03%), Postives = 221/353 (62.61%), Query Frame = 1
BLAST of Cp4.1LG01g04450 vs. Swiss-Prot
Match: ZC3HF_XENTR (Zinc finger CCCH domain-containing protein 15 OS=Xenopus tropicalis GN=zc3h15 PE=2 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 1.2e-61 Identity = 162/358 (45.25%), Postives = 219/358 (61.17%), Query Frame = 1
BLAST of Cp4.1LG01g04450 vs. Swiss-Prot
Match: ZC3HF_XENLA (Zinc finger CCCH domain-containing protein 15 OS=Xenopus laevis GN=zc3h15 PE=2 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 1.2e-61 Identity = 169/376 (44.95%), Postives = 231/376 (61.44%), Query Frame = 1
BLAST of Cp4.1LG01g04450 vs. TrEMBL
Match: A0A0A0KQ23_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G175990 PE=4 SV=1) HSP 1 Score: 639.4 bits (1648), Expect = 2.6e-180 Identity = 338/362 (93.37%), Postives = 350/362 (96.69%), Query Frame = 1
BLAST of Cp4.1LG01g04450 vs. TrEMBL
Match: M5X9Q0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007639mg PE=4 SV=1) HSP 1 Score: 577.0 bits (1486), Expect = 1.6e-161 Identity = 303/363 (83.47%), Postives = 333/363 (91.74%), Query Frame = 1
BLAST of Cp4.1LG01g04450 vs. TrEMBL
Match: A0A067FXF4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017965mg PE=4 SV=1) HSP 1 Score: 575.9 bits (1483), Expect = 3.5e-161 Identity = 301/362 (83.15%), Postives = 331/362 (91.44%), Query Frame = 1
BLAST of Cp4.1LG01g04450 vs. TrEMBL
Match: V4TI73_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031903mg PE=4 SV=1) HSP 1 Score: 575.9 bits (1483), Expect = 3.5e-161 Identity = 301/362 (83.15%), Postives = 331/362 (91.44%), Query Frame = 1
BLAST of Cp4.1LG01g04450 vs. TrEMBL
Match: K9P0T6_9ROSI (Zinc finger ccch domain-containing protein 11 OS=Morella rubra PE=2 SV=1) HSP 1 Score: 572.4 bits (1474), Expect = 3.9e-160 Identity = 307/366 (83.88%), Postives = 336/366 (91.80%), Query Frame = 1
BLAST of Cp4.1LG01g04450 vs. TAIR10
Match: AT2G20280.1 (AT2G20280.1 Zinc finger C-x8-C-x5-C-x3-H type family protein) HSP 1 Score: 518.5 bits (1334), Expect = 3.4e-147 Identity = 280/372 (75.27%), Postives = 322/372 (86.56%), Query Frame = 1
BLAST of Cp4.1LG01g04450 vs. NCBI nr
Match: gi|659090100|ref|XP_008445838.1| (PREDICTED: zinc finger CCCH domain-containing protein 11 [Cucumis melo]) HSP 1 Score: 646.4 bits (1666), Expect = 3.0e-182 Identity = 341/362 (94.20%), Postives = 352/362 (97.24%), Query Frame = 1
BLAST of Cp4.1LG01g04450 vs. NCBI nr
Match: gi|449451709|ref|XP_004143604.1| (PREDICTED: zinc finger CCCH domain-containing protein 11 [Cucumis sativus]) HSP 1 Score: 639.4 bits (1648), Expect = 3.7e-180 Identity = 338/362 (93.37%), Postives = 350/362 (96.69%), Query Frame = 1
BLAST of Cp4.1LG01g04450 vs. NCBI nr
Match: gi|596058189|ref|XP_007221002.1| (hypothetical protein PRUPE_ppa007639mg [Prunus persica]) HSP 1 Score: 577.0 bits (1486), Expect = 2.3e-161 Identity = 303/363 (83.47%), Postives = 333/363 (91.74%), Query Frame = 1
BLAST of Cp4.1LG01g04450 vs. NCBI nr
Match: gi|567887338|ref|XP_006436191.1| (hypothetical protein CICLE_v10031903mg [Citrus clementina]) HSP 1 Score: 575.9 bits (1483), Expect = 5.1e-161 Identity = 301/362 (83.15%), Postives = 331/362 (91.44%), Query Frame = 1
BLAST of Cp4.1LG01g04450 vs. NCBI nr
Match: gi|1009120809|ref|XP_015877124.1| (PREDICTED: zinc finger CCCH domain-containing protein 11 isoform X2 [Ziziphus jujuba]) HSP 1 Score: 574.7 bits (1480), Expect = 1.1e-160 Identity = 309/364 (84.89%), Postives = 333/364 (91.48%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |