CsGy5G005830 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G005830
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	F-box protein PP2-A13-like
Location	Chr5 : 3860113 .. 3860657 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGCTTCCTTTGCCAAGCTCTCCACCAATCTCCCACCTTCATCGTCTTCTACCAGCTCTTCTCTAGAAGACATCCCCGAAAATTGTATTTCCATTGTCTTGATGTACTTGGACCCTCCTGAGATCTGCAATCTTGCTTCTCTTAGCCATGCCTTTCGCTCCACTTCTTCCGCCGATTTCGTTTGGGAATCCAAACTCCCTTCTAATTACATCTTCTTGCTTCATCGAGTTCTTCAACTTCCACTATTGACCCACCCTAAGAAGGAGATCTTCGCTCGGCTTACTCGCCCATGTCCATTCGATCACGCCACTAAGGTAAATTTAATTTAATTCTTATATGAGATTTCAACTTTTTCTACCTTTTTTTGTTACAAATAATAAGGTGTTGATTGTTTATTATTTGTGTTTTGATTTTGTAGGAGTTTTGGTTGGATAAAAAATCTGGGAAAAACTTCATATCGATTTCATCTAAGGCTTTGAAGATTACTGGGATTGATGATAGAAGATATTGGAATTATATTCCAACTGATGAATCAAGGTGA

mRNA sequence

ATGGGGGCTTCCTTTGCCAAGCTCTCCACCAATCTCCCACCTTCATCGTCTTCTACCAGCTCTTCTCTAGAAGACATCCCCGAAAATTGTATTTCCATTGTCTTGATGTACTTGGACCCTCCTGAGATCTGCAATCTTGCTTCTCTTAGCCATGCCTTTCGCTCCACTTCTTCCGCCGATTTCGTTTGGGAATCCAAACTCCCTTCTAATTACATCTTCTTGCTTCATCGAGTTCTTCAACTTCCACTATTGACCCACCCTAAGAAGGAGATCTTCGCTCGGCTTACTCGCCCATGTCCATTCGATCACGCCACTAAGGAGTTTTGGTTGGATAAAAAATCTGGGAAAAACTTCATATCGATTTCATCTAAGGCTTTGAAGATTACTGGGATTGATGATAGAAGATATTGGAATTATATTCCAACTGATGAATCAAGGTGA

Coding sequence (CDS)

ATGGGGGCTTCCTTTGCCAAGCTCTCCACCAATCTCCCACCTTCATCGTCTTCTACCAGCTCTTCTCTAGAAGACATCCCCGAAAATTGTATTTCCATTGTCTTGATGTACTTGGACCCTCCTGAGATCTGCAATCTTGCTTCTCTTAGCCATGCCTTTCGCTCCACTTCTTCCGCCGATTTCGTTTGGGAATCCAAACTCCCTTCTAATTACATCTTCTTGCTTCATCGAGTTCTTCAACTTCCACTATTGACCCACCCTAAGAAGGAGATCTTCGCTCGGCTTACTCGCCCATGTCCATTCGATCACGCCACTAAGGAGTTTTGGTTGGATAAAAAATCTGGGAAAAACTTCATATCGATTTCATCTAAGGCTTTGAAGATTACTGGGATTGATGATAGAAGATATTGGAATTATATTCCAACTGATGAATCAAGGTGA

Protein sequence

MGASFAKLSTNLPPSSSSTSSSLEDIPENCISIVLMYLDPPEICNLASLSHAFRSTSSADFVWESKLPSNYIFLLHRVLQLPLLTHPKKEIFARLTRPCPFDHATKEFWLDKKSGKNFISISSKALKITGIDDRRYWNYIPTDESR

Homology

[Close]

BLAST of CsGy5G005830 vs. NCBI nr
Match: XP_004143628.1 (PREDICTED: F-box protein PP2-A14 isoform X1 [Cucumis sativus] >KGN50425.1 hypothetical protein Csa_5G173520 [Cucumis sativus])

HSP 1 Score: 298.1 bits (762), Expect = 1.6e-77
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MGASFAKLSTNLPPSSSSTSSSLEDIPENCISIVLMYLDPPEICNLASLSHAFRSTSSAD 60
           MGASFAKLSTNLPPSSSSTSSSLEDIPENCISIVLMYLDPPEICNLASLSHAFRSTSSAD
Sbjct: 1   MGASFAKLSTNLPPSSSSTSSSLEDIPENCISIVLMYLDPPEICNLASLSHAFRSTSSAD 60

Query: 61  FVWESKLPSNYIFLLHRVLQLPLLTHPKKEIFARLTRPCPFDHATKEFWLDKKSGKNFIS 120
           FVWESKLPSNYIFLLHRVLQLPLLTHPKKEIFARLTRPCPFDHATKEFWLDKKSGKNFIS
Sbjct: 61  FVWESKLPSNYIFLLHRVLQLPLLTHPKKEIFARLTRPCPFDHATKEFWLDKKSGKNFIS 120

Query: 121 ISSKALKITGIDDRRYWNYIPTDESR 147
           ISSKALKITGIDDRRYWNYIPTDESR
Sbjct: 121 ISSKALKITGIDDRRYWNYIPTDESR 146

[Close]

BLAST of CsGy5G005830 vs. NCBI nr
Match: XP_011654896.1 (PREDICTED: F-box protein PP2-A13 isoform X2 [Cucumis sativus])

HSP 1 Score: 298.1 bits (762), Expect = 1.6e-77
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MGASFAKLSTNLPPSSSSTSSSLEDIPENCISIVLMYLDPPEICNLASLSHAFRSTSSAD 60
           MGASFAKLSTNLPPSSSSTSSSLEDIPENCISIVLMYLDPPEICNLASLSHAFRSTSSAD
Sbjct: 1   MGASFAKLSTNLPPSSSSTSSSLEDIPENCISIVLMYLDPPEICNLASLSHAFRSTSSAD 60

Query: 61  FVWESKLPSNYIFLLHRVLQLPLLTHPKKEIFARLTRPCPFDHATKEFWLDKKSGKNFIS 120
           FVWESKLPSNYIFLLHRVLQLPLLTHPKKEIFARLTRPCPFDHATKEFWLDKKSGKNFIS
Sbjct: 61  FVWESKLPSNYIFLLHRVLQLPLLTHPKKEIFARLTRPCPFDHATKEFWLDKKSGKNFIS 120

Query: 121 ISSKALKITGIDDRRYWNYIPTDESR 147
           ISSKALKITGIDDRRYWNYIPTDESR
Sbjct: 121 ISSKALKITGIDDRRYWNYIPTDESR 146

[Close]

BLAST of CsGy5G005830 vs. NCBI nr
Match: XP_008467221.1 (PREDICTED: LOW QUALITY PROTEIN: F-box protein PP2-A14 [Cucumis melo])

HSP 1 Score: 269.2 bits (687), Expect = 8.0e-69
Identity = 135/147 (91.84%), Postives = 139/147 (94.56%), Query Frame = 0


Query: 1   MGASFAKLSTNLPPSSSSTSSSLEDIPENCISIVLMYLDPPEICNLASLSHAFRSTSSAD 60
           MGASFAK+STNLPPSSSSTSS LEDIPENCISIV MYLDPPEICNLASL+HAFRS+SSAD
Sbjct: 1   MGASFAKVSTNLPPSSSSTSSPLEDIPENCISIVFMYLDPPEICNLASLNHAFRSSSSAD 60

Query: 61  FVWESKLPSNYIFLLHRVLQLPLLT-HPKKEIFARLTRPCPFDHATKEFWLDKKSGKNFI 120
           FVWESKLPSNYIFLLHRVLQL  LT HPKKEIFA LTRP  FDHATKEFWLDKKSG+NFI
Sbjct: 61  FVWESKLPSNYIFLLHRVLQLQQLTAHPKKEIFATLTRPSLFDHATKEFWLDKKSGENFI 120

Query: 121 SISSKALKITGIDDRRYWNYIPTDESR 147
           SISSKALKITGIDDRRYWNYIPTDESR
Sbjct: 121 SISSKALKITGIDDRRYWNYIPTDESR 147

[Close]

BLAST of CsGy5G005830 vs. NCBI nr
Match: XP_023533028.1 (F-box protein PP2-A13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 192.6 bits (488), Expect = 9.5e-46
Identity = 101/151 (66.89%), Postives = 118/151 (78.15%), Query Frame = 0


Query: 1   MGASFAKLSTNLPPSSSSTSSSLEDIPENCISIVLMYLDPPEICNLASLSHAFRSTSSAD 60
           MGA+FAK ST +P  SS  S+S +D+PENCISIVLM+L+PPEIC LA+L+ AFR+ SSAD
Sbjct: 1   MGAAFAKDST-IPVCSS--SNSFDDVPENCISIVLMFLEPPEICKLAALNRAFRAASSAD 60

Query: 61  FVWESKLPSNYIFLLHRVL-----QLPLLTHPKKEIFARLTRPCPFDHATKEFWLDKKSG 120
           F+W SKLPSNY  LL R+L            PKKEIFARL+RP  FD  TKE WLDK SG
Sbjct: 61  FIWNSKLPSNYAVLLRRILPPCSSDRDYRRLPKKEIFARLSRPNLFDCGTKELWLDKSSG 120

Query: 121 KNFISISSKALKITGIDDRRYWNYIPTDESR 147
           K F+SISSKALKITGI+DRRYWN++PTDESR
Sbjct: 121 KLFVSISSKALKITGIEDRRYWNFVPTDESR 148

[Close]

BLAST of CsGy5G005830 vs. NCBI nr
Match: XP_022957782.1 (F-box protein PP2-A13-like [Cucurbita moschata])

HSP 1 Score: 190.7 bits (483), Expect = 3.6e-45
Identity = 99/151 (65.56%), Postives = 117/151 (77.48%), Query Frame = 0


Query: 1   MGASFAKLSTNLPPSSSSTSSSLEDIPENCISIVLMYLDPPEICNLASLSHAFRSTSSAD 60
           MGA+FAK  T +P  SS  S+S +D+PENCISIVLM+L+PPEIC LA+L+ AFR+ SSAD
Sbjct: 1   MGAAFAKDCT-IPVCSS--SNSFDDVPENCISIVLMFLEPPEICKLAALNRAFRAASSAD 60

Query: 61  FVWESKLPSNYIFLLHRVL-----QLPLLTHPKKEIFARLTRPCPFDHATKEFWLDKKSG 120
           F+W SKLPSNY  LL R+L            PKKEIFARL+RP  FD  TKE WLDK SG
Sbjct: 61  FIWNSKLPSNYAVLLRRILPPCSSDRDYRRLPKKEIFARLSRPNLFDRGTKELWLDKSSG 120

Query: 121 KNFISISSKALKITGIDDRRYWNYIPTDESR 147
           K F+SIS+KALKITGI+DRRYWN++PTDESR
Sbjct: 121 KLFVSISAKALKITGIEDRRYWNFVPTDESR 148

[Close]

BLAST of CsGy5G005830 vs. TAIR10
Match: AT5G52120.1 (phloem protein 2-A14)

HSP 1 Score: 154.8 bits (390), Expect = 4.0e-38
Identity = 80/153 (52.29%), Postives = 105/153 (68.63%), Query Frame = 0


Query: 1   MGASFAKLSTNLPPSSSSTSSSLEDIPENCISIVLMYLDPPEICNLASLSHAFRSTSSAD 60
           MGA+ + +  + P   +     LED+PENCI+ + MY++PPEIC LA ++ +F   S +D
Sbjct: 1   MGAASSSIVRSEP--FAGKLCGLEDVPENCITAMFMYMEPPEICLLARVNKSFHRASRSD 60

Query: 61  FVWESKLPSNYIFLLHRVLQ-------LPLLTHPKKEIFARLTRPCPFDHATKEFWLDKK 120
            VWE KLPSNY FL+ R+L+          L + KKEI+ARL RP  FD  TKE WLDK+
Sbjct: 61  AVWEDKLPSNYKFLVRRILEDQQQVGVKDKLIYRKKEIYARLCRPNLFDTGTKEAWLDKR 120

Query: 121 SGKNFISISSKALKITGIDDRRYWNYIPTDESR 147
           SGK F++IS KA+KITGIDDRRYW +I +DESR
Sbjct: 121 SGKVFLAISPKAMKITGIDDRRYWEHISSDESR 151

[Close]

BLAST of CsGy5G005830 vs. TAIR10
Match: AT3G61060.2 (phloem protein 2-A13)

HSP 1 Score: 154.5 bits (389), Expect = 5.2e-38
Identity = 72/126 (57.14%), Postives = 98/126 (77.78%), Query Frame = 0


Query: 23  LEDIPENCISIVLMYLDPPEICNLASLSHAFRSTSSADFVWESKLPSNYIFLLHRVL-QL 82
           L D+PENC+++++  LDPPEIC LA L+  FR  SSADF+WESKLP+NY  + H+V  ++
Sbjct: 25  LVDLPENCVALIMTRLDPPEICRLARLNRMFRRASSADFIWESKLPANYRVIAHKVFDEI 84

Query: 83  PLLTHPKKEIFARLTRPCPFDHATK-EFWLDKKSGKNFISISSKALKITGIDDRRYWNYI 142
            L    KK+++A+L++P  FD  TK E W+DK +G+  +SISSKAL+ITGIDDRRYW++I
Sbjct: 85  TLTKLIKKDLYAKLSQPNLFDDGTKQELWIDKNTGRLCLSISSKALRITGIDDRRYWSHI 144

Query: 143 PTDESR 147
           PTDESR
Sbjct: 145 PTDESR 150

[Close]

BLAST of CsGy5G005830 vs. TAIR10
Match: AT3G53000.1 (phloem protein 2-A15)

HSP 1 Score: 143.7 bits (361), Expect = 9.2e-35
Identity = 72/146 (49.32%), Postives = 99/146 (67.81%), Query Frame = 0


Query: 1   MGASFAKLSTNLPPSSSSTSSSLEDIPENCISIVLMYLDPPEICNLASLSHAFRSTSSAD 60
           MG+S + L  N   +  +    L DIPE+C++ V MYL PPEICNLA L+ +FR  +S+D
Sbjct: 1   MGSSLSNL--NDGTNGLAMGPGLGDIPESCVACVFMYLTPPEICNLAGLNRSFRGAASSD 60

Query: 61  FVWESKLPSNYIFLLHRVLQLPLLTHPKKEIFARLTRPCPFDHATKEFWLDKKSGKNFIS 120
            VWE KLP NY  LL  +      +  KK+IFA L+RP PFD   KE W+D+ +G+  ++
Sbjct: 61  SVWEKKLPENYQDLLDLLPPERYHSLSKKDIFAVLSRPIPFDDDNKEVWIDRVTGRVCMA 120

Query: 121 ISSKALKITGIDDRRYWNYIPTDESR 147
           IS++ + ITGI+DRRYWN+IPT+ESR
Sbjct: 121 ISARGMSITGIEDRRYWNWIPTEESR 144

[Close]

BLAST of CsGy5G005830 vs. TAIR10
Match: AT1G12710.1 (phloem protein 2-A12)

HSP 1 Score: 130.2 bits (326), Expect = 1.0e-30
Identity = 70/151 (46.36%), Postives = 96/151 (63.58%), Query Frame = 0


Query: 1   MGASFAKLSTNLPPSS-----SSTSSSLEDIPENCISIVLMYLDPPEICNLASLSHAFRS 60
           MG + + L  +L  SS     +     L D+PE C++I++  LDP EIC  + L+ AFR 
Sbjct: 1   MGVAHSDLHNDLSSSSCFGDRNILKPGLGDLPEACVAIIVENLDPVEICRFSKLNRAFRG 60

Query: 61  TSSADFVWESKLPSNYIFLLHRVLQLPLLTHPKKEIFARLTRPCPFDHATKEFWLDKKSG 120
            S AD VWESKLP NY  +L ++L        K+ ++A L+R   FD ATK+ W+DK++ 
Sbjct: 61  ASWADCVWESKLPQNYRDVLEKILGGFPENLQKRHLYAFLSRINSFDDATKKVWIDKRTS 120

Query: 121 KNFISISSKALKITGIDDRRYWNYIPTDESR 147
              +SIS+K L ITGIDDRRYW++IPTDESR
Sbjct: 121 GVCLSISAKGLSITGIDDRRYWSHIPTDESR 151

[Close]

BLAST of CsGy5G005830 vs. TAIR10
Match: AT1G63090.1 (phloem protein 2-A11)

HSP 1 Score: 125.2 bits (313), Expect = 3.4e-29
Identity = 64/149 (42.95%), Postives = 91/149 (61.07%), Query Frame = 0


Query: 1   MGASFAKLSTNLPP---SSSSTSSSLEDIPENCISIVLMYLDPPEICNLASLSHAFRSTS 60
           MG+ F+    NL             L D+PE+C++++L  LDP EIC  + L+ AF   S
Sbjct: 1   MGSGFSLFQKNLSSCYGDRDLLQPGLGDLPESCVALILQNLDPVEICRFSKLNTAFHGAS 60

Query: 61  SADFVWESKLPSNYIFLLHRVLQLPLLTHPKKEIFARLTRPCPFDHATKEFWLDKKSGKN 120
            ADFVWESKLP +Y  +L ++L        K++IF  L+R   FD   K+ W+DK++G  
Sbjct: 61  WADFVWESKLPPDYKLILEKILGSFPDNLRKRDIFTFLSRVNSFDEGNKKAWVDKRTGGL 120

Query: 121 FISISSKALKITGIDDRRYWNYIPTDESR 147
            +  S+K L ITGIDDRRYW++IP+D+SR
Sbjct: 121 CLCTSAKGLSITGIDDRRYWSHIPSDDSR 149

[Close]

BLAST of CsGy5G005830 vs. Swiss-Prot
Match: sp|Q9LEX0|P2A13_ARATH (F-box protein PP2-A13 OS=Arabidopsis thaliana OX=3702 GN=PP2A13 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.8e-38
Identity = 72/125 (57.60%), Postives = 98/125 (78.40%), Query Frame = 0


Query: 23  LEDIPENCISIVLMYLDPPEICNLASLSHAFRSTSSADFVWESKLPSNYIFLLHRVL-QL 82
           L D+PENC+++++  LDPPEIC LA L+  FR  SSADF+WESKLP+NY  + H+V  ++
Sbjct: 25  LVDLPENCVALIMTRLDPPEICRLARLNRMFRRASSADFIWESKLPANYRVIAHKVFDEI 84

Query: 83  PLLTHPKKEIFARLTRPCPFDHATKEFWLDKKSGKNFISISSKALKITGIDDRRYWNYIP 142
            L    KK+++A+L++P  FD  TKE W+DK +G+  +SISSKAL+ITGIDDRRYW++IP
Sbjct: 85  TLTKLIKKDLYAKLSQPNLFDDGTKELWIDKNTGRLCLSISSKALRITGIDDRRYWSHIP 144

Query: 143 TDESR 147
           TDESR
Sbjct: 145 TDESR 149

[Close]

BLAST of CsGy5G005830 vs. Swiss-Prot
Match: sp|Q9FJ80|P2A14_ARATH (F-box protein PP2-A14 OS=Arabidopsis thaliana OX=3702 GN=PP2A14 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 7.2e-37
Identity = 80/153 (52.29%), Postives = 105/153 (68.63%), Query Frame = 0


Query: 1   MGASFAKLSTNLPPSSSSTSSSLEDIPENCISIVLMYLDPPEICNLASLSHAFRSTSSAD 60
           MGA+ + +  + P   +     LED+PENCI+ + MY++PPEIC LA ++ +F   S +D
Sbjct: 1   MGAASSSIVRSEP--FAGKLCGLEDVPENCITAMFMYMEPPEICLLARVNKSFHRASRSD 60

Query: 61  FVWESKLPSNYIFLLHRVLQ-------LPLLTHPKKEIFARLTRPCPFDHATKEFWLDKK 120
            VWE KLPSNY FL+ R+L+          L + KKEI+ARL RP  FD  TKE WLDK+
Sbjct: 61  AVWEDKLPSNYKFLVRRILEDQQQVGVKDKLIYRKKEIYARLCRPNLFDTGTKEAWLDKR 120

Query: 121 SGKNFISISSKALKITGIDDRRYWNYIPTDESR 147
           SGK F++IS KA+KITGIDDRRYW +I +DESR
Sbjct: 121 SGKVFLAISPKAMKITGIDDRRYWEHISSDESR 151

[Close]

BLAST of CsGy5G005830 vs. Swiss-Prot
Match: sp|Q9LF92|P2A15_ARATH (F-box protein PP2-A15 OS=Arabidopsis thaliana OX=3702 GN=PP2A15 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.7e-33
Identity = 72/146 (49.32%), Postives = 99/146 (67.81%), Query Frame = 0


Query: 1   MGASFAKLSTNLPPSSSSTSSSLEDIPENCISIVLMYLDPPEICNLASLSHAFRSTSSAD 60
           MG+S + L  N   +  +    L DIPE+C++ V MYL PPEICNLA L+ +FR  +S+D
Sbjct: 1   MGSSLSNL--NDGTNGLAMGPGLGDIPESCVACVFMYLTPPEICNLAGLNRSFRGAASSD 60

Query: 61  FVWESKLPSNYIFLLHRVLQLPLLTHPKKEIFARLTRPCPFDHATKEFWLDKKSGKNFIS 120
            VWE KLP NY  LL  +      +  KK+IFA L+RP PFD   KE W+D+ +G+  ++
Sbjct: 61  SVWEKKLPENYQDLLDLLPPERYHSLSKKDIFAVLSRPIPFDDDNKEVWIDRVTGRVCMA 120

Query: 121 ISSKALKITGIDDRRYWNYIPTDESR 147
           IS++ + ITGI+DRRYWN+IPT+ESR
Sbjct: 121 ISARGMSITGIEDRRYWNWIPTEESR 144

[Close]

BLAST of CsGy5G005830 vs. Swiss-Prot
Match: sp|Q9LN77|P2A12_ARATH (F-box protein PP2-A12 OS=Arabidopsis thaliana OX=3702 GN=P2A12 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.9e-29
Identity = 70/151 (46.36%), Postives = 96/151 (63.58%), Query Frame = 0


Query: 1   MGASFAKLSTNLPPSS-----SSTSSSLEDIPENCISIVLMYLDPPEICNLASLSHAFRS 60
           MG + + L  +L  SS     +     L D+PE C++I++  LDP EIC  + L+ AFR 
Sbjct: 1   MGVAHSDLHNDLSSSSCFGDRNILKPGLGDLPEACVAIIVENLDPVEICRFSKLNRAFRG 60

Query: 61  TSSADFVWESKLPSNYIFLLHRVLQLPLLTHPKKEIFARLTRPCPFDHATKEFWLDKKSG 120
            S AD VWESKLP NY  +L ++L        K+ ++A L+R   FD ATK+ W+DK++ 
Sbjct: 61  ASWADCVWESKLPQNYRDVLEKILGGFPENLQKRHLYAFLSRINSFDDATKKVWIDKRTS 120

Query: 121 KNFISISSKALKITGIDDRRYWNYIPTDESR 147
              +SIS+K L ITGIDDRRYW++IPTDESR
Sbjct: 121 GVCLSISAKGLSITGIDDRRYWSHIPTDESR 151

[Close]

BLAST of CsGy5G005830 vs. Swiss-Prot
Match: sp|Q9CAN4|P2A11_ARATH (F-box protein PP2-A11 OS=Arabidopsis thaliana OX=3702 GN=PP2A11 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 6.1e-28
Identity = 64/149 (42.95%), Postives = 91/149 (61.07%), Query Frame = 0


Query: 1   MGASFAKLSTNLPP---SSSSTSSSLEDIPENCISIVLMYLDPPEICNLASLSHAFRSTS 60
           MG+ F+    NL             L D+PE+C++++L  LDP EIC  + L+ AF   S
Sbjct: 1   MGSGFSLFQKNLSSCYGDRDLLQPGLGDLPESCVALILQNLDPVEICRFSKLNTAFHGAS 60

Query: 61  SADFVWESKLPSNYIFLLHRVLQLPLLTHPKKEIFARLTRPCPFDHATKEFWLDKKSGKN 120
            ADFVWESKLP +Y  +L ++L        K++IF  L+R   FD   K+ W+DK++G  
Sbjct: 61  WADFVWESKLPPDYKLILEKILGSFPDNLRKRDIFTFLSRVNSFDEGNKKAWVDKRTGGL 120

Query: 121 FISISSKALKITGIDDRRYWNYIPTDESR 147
            +  S+K L ITGIDDRRYW++IP+D+SR
Sbjct: 121 CLCTSAKGLSITGIDDRRYWSHIPSDDSR 149

[Close]

BLAST of CsGy5G005830 vs. TrEMBL
Match: tr|A0A0A0KL73|A0A0A0KL73_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G173520 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.1e-77
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MGASFAKLSTNLPPSSSSTSSSLEDIPENCISIVLMYLDPPEICNLASLSHAFRSTSSAD 60
           MGASFAKLSTNLPPSSSSTSSSLEDIPENCISIVLMYLDPPEICNLASLSHAFRSTSSAD
Sbjct: 1   MGASFAKLSTNLPPSSSSTSSSLEDIPENCISIVLMYLDPPEICNLASLSHAFRSTSSAD 60

Query: 61  FVWESKLPSNYIFLLHRVLQLPLLTHPKKEIFARLTRPCPFDHATKEFWLDKKSGKNFIS 120
           FVWESKLPSNYIFLLHRVLQLPLLTHPKKEIFARLTRPCPFDHATKEFWLDKKSGKNFIS
Sbjct: 61  FVWESKLPSNYIFLLHRVLQLPLLTHPKKEIFARLTRPCPFDHATKEFWLDKKSGKNFIS 120

Query: 121 ISSKALKITGIDDRRYWNYIPTDESR 147
           ISSKALKITGIDDRRYWNYIPTDESR
Sbjct: 121 ISSKALKITGIDDRRYWNYIPTDESR 146

[Close]

BLAST of CsGy5G005830 vs. TrEMBL
Match: tr|A0A1S3CUB8|A0A1S3CUB8_CUCME (LOW QUALITY PROTEIN: F-box protein PP2-A14 OS=Cucumis melo OX=3656 GN=LOC103504624 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 5.3e-69
Identity = 135/147 (91.84%), Postives = 139/147 (94.56%), Query Frame = 0


Query: 1   MGASFAKLSTNLPPSSSSTSSSLEDIPENCISIVLMYLDPPEICNLASLSHAFRSTSSAD 60
           MGASFAK+STNLPPSSSSTSS LEDIPENCISIV MYLDPPEICNLASL+HAFRS+SSAD
Sbjct: 1   MGASFAKVSTNLPPSSSSTSSPLEDIPENCISIVFMYLDPPEICNLASLNHAFRSSSSAD 60

Query: 61  FVWESKLPSNYIFLLHRVLQLPLLT-HPKKEIFARLTRPCPFDHATKEFWLDKKSGKNFI 120
           FVWESKLPSNYIFLLHRVLQL  LT HPKKEIFA LTRP  FDHATKEFWLDKKSG+NFI
Sbjct: 61  FVWESKLPSNYIFLLHRVLQLQQLTAHPKKEIFATLTRPSLFDHATKEFWLDKKSGENFI 120

Query: 121 SISSKALKITGIDDRRYWNYIPTDESR 147
           SISSKALKITGIDDRRYWNYIPTDESR
Sbjct: 121 SISSKALKITGIDDRRYWNYIPTDESR 147

[Close]

BLAST of CsGy5G005830 vs. TrEMBL
Match: tr|A0A2I4FG69|A0A2I4FG69_9ROSI (F-box protein PP2-A13-like OS=Juglans regia OX=51240 GN=LOC108998534 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 5.0e-43
Identity = 95/148 (64.19%), Postives = 110/148 (74.32%), Query Frame = 0


Query: 1   MGASFAKLSTNLPPS--SSSTSSSLEDIPENCISIVLMYLDPPEICNLASLSHAFRSTSS 60
           MGASF+    +   +  SS +  SL D+PENCIS +LMYLDPPEIC LA L+ AFRS S 
Sbjct: 1   MGASFSGFVADQSSTEVSSPSKPSLGDLPENCISSILMYLDPPEICKLARLNRAFRSASR 60

Query: 61  ADFVWESKLPSNYIFLLHRVLQLPLLTHPKKEIFARLTRPCPFDHATKEFWLDKKSGKNF 120
           ADFVWESKLPSNY FL+++VL        KK+I+ARL R   FDH TKE WLDK SGK F
Sbjct: 61  ADFVWESKLPSNYKFLVNKVLHEDTENLAKKDIYARLCRHNHFDHGTKEVWLDKSSGKVF 120

Query: 121 ISISSKALKITGIDDRRYWNYIPTDESR 147
           +SISSK L+ITGIDDRRYWNYI T+ESR
Sbjct: 121 MSISSKTLRITGIDDRRYWNYIATEESR 148

[Close]

BLAST of CsGy5G005830 vs. TrEMBL
Match: tr|A0A2I4GZ49|A0A2I4GZ49_9ROSI (F-box protein PP2-A11-like OS=Juglans regia OX=51240 GN=LOC109012118 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 7.9e-41
Identity = 89/147 (60.54%), Postives = 106/147 (72.11%), Query Frame = 0


Query: 1   MGASFAKLSTNLPPSSSSTSS-SLEDIPENCISIVLMYLDPPEICNLASLSHAFRSTSSA 60
           MG  F+  + N      S S   L+D+PENCI+ +L YLDPPEIC LA L+  FR  S A
Sbjct: 5   MGVGFSGFAANQNYGVCSPSKPGLDDLPENCIASILKYLDPPEICKLAQLNKTFRGASWA 64

Query: 61  DFVWESKLPSNYIFLLHRVLQLPLLTHPKKEIFARLTRPCPFDHATKEFWLDKKSGKNFI 120
           DFVWESKLP+++ FL+ +VL       PKKEI+ARL RP  FDH TKE WLDK SGK F+
Sbjct: 65  DFVWESKLPTDHKFLVDKVLHGNPENLPKKEIYARLCRPNSFDHGTKEVWLDKSSGKIFM 124

Query: 121 SISSKALKITGIDDRRYWNYIPTDESR 147
            ISSKAL+ITGIDDRRYWNY+PT+ESR
Sbjct: 125 LISSKALRITGIDDRRYWNYLPTEESR 151

[Close]

BLAST of CsGy5G005830 vs. TrEMBL
Match: tr|A0A2I4GZ47|A0A2I4GZ47_9ROSI (F-box protein PP2-A11-like OS=Juglans regia OX=51240 GN=LOC109012119 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 7.9e-41
Identity = 89/147 (60.54%), Postives = 106/147 (72.11%), Query Frame = 0


Query: 1   MGASFAKLSTNLPPSSSSTSS-SLEDIPENCISIVLMYLDPPEICNLASLSHAFRSTSSA 60
           MG  F+  + N      S S   L+D+PENCI+ +L YLDPPEIC LA L+  FR  S A
Sbjct: 5   MGVGFSGFAANQNYGVCSPSKPGLDDLPENCIASILKYLDPPEICKLAQLNKTFRGASWA 64

Query: 61  DFVWESKLPSNYIFLLHRVLQLPLLTHPKKEIFARLTRPCPFDHATKEFWLDKKSGKNFI 120
           DFVWESKLP+++ FL+ +VL       PKKEI+ARL RP  FDH TKE WLDK SGK F+
Sbjct: 65  DFVWESKLPTDHKFLVDKVLHGNPENLPKKEIYARLCRPNSFDHGTKEVWLDKSSGKIFM 124

Query: 121 SISSKALKITGIDDRRYWNYIPTDESR 147
            ISSKAL+ITGIDDRRYWNY+PT+ESR
Sbjct: 125 LISSKALRITGIDDRRYWNYLPTEESR 151

The following BLAST results are available for this feature:

BLAST of CsGy5G005830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143628.1	1.6e-77	100.00	PREDICTED: F-box protein PP2-A14 isoform X1 [Cucumis sativus] >KGN50425.1 hypoth...	[more]
XP_011654896.1	1.6e-77	100.00	PREDICTED: F-box protein PP2-A13 isoform X2 [Cucumis sativus]	[more]
XP_008467221.1	8.0e-69	91.84	PREDICTED: LOW QUALITY PROTEIN: F-box protein PP2-A14 [Cucumis melo]	[more]
XP_023533028.1	9.5e-46	66.89	F-box protein PP2-A13-like [Cucurbita pepo subsp. pepo]	[more]
XP_022957782.1	3.6e-45	65.56	F-box protein PP2-A13-like [Cucurbita moschata]	[more]

BLAST of CsGy5G005830 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G52120.1	4.0e-38	52.29	phloem protein 2-A14	[more]
AT3G61060.2	5.2e-38	57.14	phloem protein 2-A13	[more]
AT3G53000.1	9.2e-35	49.32	phloem protein 2-A15	[more]
AT1G12710.1	1.0e-30	46.36	phloem protein 2-A12	[more]
AT1G63090.1	3.4e-29	42.95	phloem protein 2-A11	[more]

BLAST of CsGy5G005830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LEX0\|P2A13_ARATH	3.8e-38	57.60	F-box protein PP2-A13 OS=Arabidopsis thaliana OX=3702 GN=PP2A13 PE=1 SV=1	[more]
sp\|Q9FJ80\|P2A14_ARATH	7.2e-37	52.29	F-box protein PP2-A14 OS=Arabidopsis thaliana OX=3702 GN=PP2A14 PE=1 SV=1	[more]
sp\|Q9LF92\|P2A15_ARATH	1.7e-33	49.32	F-box protein PP2-A15 OS=Arabidopsis thaliana OX=3702 GN=PP2A15 PE=2 SV=1	[more]
sp\|Q9LN77\|P2A12_ARATH	1.9e-29	46.36	F-box protein PP2-A12 OS=Arabidopsis thaliana OX=3702 GN=P2A12 PE=2 SV=1	[more]
sp\|Q9CAN4\|P2A11_ARATH	6.1e-28	42.95	F-box protein PP2-A11 OS=Arabidopsis thaliana OX=3702 GN=PP2A11 PE=1 SV=1	[more]

BLAST of CsGy5G005830 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KL73\|A0A0A0KL73_CUCSA	1.1e-77	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G173520 PE=4 SV=1	[more]
tr\|A0A1S3CUB8\|A0A1S3CUB8_CUCME	5.3e-69	91.84	LOW QUALITY PROTEIN: F-box protein PP2-A14 OS=Cucumis melo OX=3656 GN=LOC1035046...	[more]
tr\|A0A2I4FG69\|A0A2I4FG69_9ROSI	5.0e-43	64.19	F-box protein PP2-A13-like OS=Juglans regia OX=51240 GN=LOC108998534 PE=4 SV=1	[more]
tr\|A0A2I4GZ49\|A0A2I4GZ49_9ROSI	7.9e-41	60.54	F-box protein PP2-A11-like OS=Juglans regia OX=51240 GN=LOC109012118 PE=4 SV=1	[more]
tr\|A0A2I4GZ47\|A0A2I4GZ47_9ROSI	7.9e-41	60.54	F-box protein PP2-A11-like OS=Juglans regia OX=51240 GN=LOC109012119 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036047	F-box-like_dom_sf
IPR001810	F-box_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G005830.1	CsGy5G005830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 7..118 e-value: 1.8E-5 score: 26.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR31960:SF3	F-BOX PROTEIN PP2-A13	coord: 1..146
None	No IPR available	PANTHER	PTHR31960	FAMILY NOT NAMED	coord: 1..146
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 22..63 e-value: 4.1E-4 score: 20.0
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 20..66 score: 10.054
IPR036047	F-box-like domain superfamily	SUPERFAMILY	SSF81383	F-box domain	coord: 16..93

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G005830	Cla002335	Watermelon (97103) v1	cgybwmB384
CsGy5G005830	Csa5G173520	Cucumber (Chinese Long) v2	cgybcuB224
CsGy5G005830	MELO3C005373	Melon (DHL92) v3.5.1	cgybmeB301
CsGy5G005830	ClCG01G005600	Watermelon (Charleston Gray)	cgybwcgB332
CsGy5G005830	CSPI05G08440	Wild cucumber (PI 183967)	cgybcpiB226
CsGy5G005830	CmaCh02G010430	Cucurbita maxima (Rimu)	cgybcmaB636
CsGy5G005830	CmoCh02G010570	Cucurbita moschata (Rifu)	cgybcmoB614
CsGy5G005830	Lsi09G005910	Bottle gourd (USVL1VR-Ls)	cgyblsiB294
CsGy5G005830	Cp4.1LG05g06870	Cucurbita pepo (Zucchini)	cgybcpeB692
CsGy5G005830	MELO3C005373.2	Melon (DHL92) v3.6.1	cgybmedB301
CsGy5G005830	CsaV3_5G005830	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G005830	Cla97C01G005850	Watermelon (97103) v2	cgybwmbB319
CsGy5G005830	Bhi12G000480	Wax gourd	cgybwgoB431
CsGy5G005830	Carg08434	Silver-seed gourd	carcgybB0711

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G005830	Cucumber (Gy14) v2	cgybcgybB087
CsGy5G005830	Cucurbita maxima (Rimu)	cgybcmaB601
CsGy5G005830	Cucurbita moschata (Rifu)	cgybcmoB573
CsGy5G005830	Cucurbita pepo (Zucchini)	cgybcpeB608
CsGy5G005830	Bottle gourd (USVL1VR-Ls)	cgyblsiB346
CsGy5G005830	Melon (DHL92) v3.5.1	cgybmeB350
CsGy5G005830	Melon (DHL92) v3.6.1	cgybmedB350
CsGy5G005830	Watermelon (97103) v1	cgybwmB376
CsGy5G005830	Silver-seed gourd	carcgybB0735
CsGy5G005830	Cucumber (Chinese Long) v3	cgybcucB212