Cla002335 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla002335
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	F-box protein PP2-B1 (AHRD V1 ***- PP2B1_ARATH); contains Interpro domain(s) IPR001810 Cyclin-like F-box
Location	Chr1 : 4597569 .. 4599961 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGCTTCCTTTGCCAAACACTCCAATCTCCCTTCCTCTCCTTCCTCCTCCGATTCCTCTTCTCTGGAAGACATACCGGAAAATTGTATTTCCATTGTCTTCATGTACTTGGATCCTCCCGAGATTTGCAATCTTGCCTCTCTTAATCGAGCCTTTCGTGCTGCTTCTTCCGCTGATTTCGTTTGGGAATCCAAACTCCCTCCCAATTACAACTTCTTACTTCATCGAGTTCTTCATCCTCAATTGTGCCAGCCTAAGAAACACATCTTCGCTACCCTCACTCGCCCTTATCTCTTTGATCATGCCACCAAGGTAATTATTATTATAATTATATCTTGTCTTATGGACATTCAAACTTCTCATTTTTTATTAAATATAATTCAAACAATAGAGAGTTTTCTTTTTTTGGGGTCTTTTTTAGGAGGTTTGGTTGGATAAAAGTTCTGGAAAAATTTTTGTTTCTATTTCATCCAAGGCTCTGAAGATTACAGGGATCGATGATAGAAGATATTGGAACTATATTCCAACTGATGAATCAAGGTGAGGAACAAACTTCACTTTGGTACTTTGGTGATGATGATCTGAATTTTTTTATTAATTTCAACTGTCTGTACTAAAATAAAATAAATCAACAAATATTTTTGGGGTTTGAAAAAATAAAATAAAAAAGTGTGAAAGGGCATTTAATTCGAAGGGGAAGGATAATGACAGATGAGGACTTTTTCAAAGGAGAGTGTGAATGTTTATTTATTATTTTAGACCCAATTTAATTTATTATTTTTTTCTATTTATTAAGATTTCTGCTTTTTTGCAAGTTTCCTCAAGAAGAATTCTTCCTTATCCTTTTTTTTAAAAAAAAAAAAAAAAATTATTTTTCTTTTTCTTTTTTCCCCTCCACAGATGCTGATGGGTCTTTTCGAAAAATATAATGGAAGAAAGATGGTGGATAATTATCTTTGGAAAAGTATTTTTCTTTTTTCTTTTGAAAGACAATATTTATTCAAATCTTCTTTCATAAATTTTAATTAATTTTTGCTTATTTTCCATTATGGTACCAGAAGTTTTAAATTTTAGATTTTTATTCCATTTTCCTCATTTCTTTTTTCTTTTTTTAATTTGGTTTAAATCTTATTAACTTTTTCCATTTTAATCTCTAATTTTTTTAATCTTTCAAAAAAAATATTCTTATGGAAGTTAATTATTTTATTCGGTTAACAAGAACTAAATCCATTTATGACCCGATAAGATATACGTAATTTGTTTATATTTAGCCTTTTCTTTTTGAAGAATTGTTCATATTTGGCTTCAAATACTAGTTTAGGTAGGGATTGATTGACCATATATTATGTTTTTGTCAATTAATTTGTTAAAATATTATTATCTAAGACTAAAGTTTTAATACCTGTCATTGTCCCAATGCCAAAAATTATAAGATAAAATACGGGCTAATAATATTCTCATTTCTCATTTTTGTTCCTTATTTTTATTAATAAAAACTATCTAAAAGCAAATACACGTCTAGTAATTATTTCTTCTTTTTCTTTTTTGTTTCTAAACAAGAATTAATTTAGAAATCCGTTTAGTAATTATTTCTTGTTTTTTAATTTTTTAATTGAAATAAAAACTTCAAAAAAGAAAATACGTTTTTTTTTTAAAAAAAGAAAATAGTATTTGTGTCATTTAAAAAAAAAGTTAATTGTAAATTTAGTTCTTATGGTTTTGAAAAAATTACAATTTAGTCCTTATGATTTATAATTATAATTTAGTCATTAGAATTTTATTAGACGTTAGGAACTATTTAATCAAATAATAAAGAATCAAATTCTAACTTTTAAAATCATAAAAACTAAATCCTAACTTTCTTTAAACTATAAAAGACCAAATTTGTAATTTTAAAAAAAAAAATTTCACTTCGATATCGAAAAGTCAAAACTTTGAATTGGATTTGAAATGAAGAGTTGGTGGTAATTGACAGGTTTGGGACAGTGGCATATTTGAAACAAATATGGTGGGTTGAAATAGGAGGAGAATTGGAGTTTGAGTTACCTAAGGGAAGCTACAGTGTATATTTCAGGCTTCAATTGGGGAAAGCTTCAAAGAAATTTGGAAGAAGATTTGTAGATGTGGATCAAGTTCATGGATGGGAACTTAAGCCAGTGAGATTTGAAGTCTCAGTTTCCAATGCCCAAAAAGCTTCATCTGAGTGTTATTTAAACCAATTTGGGAAATGGGTTTTGTATAAAGTGGGAGATTTTAGTGTTGAAACCCCTAATTTTGTAGCTCATATCAAATTTTCAATGATTCAAATTGATTGTACTCATACTAAAGGTGGCCTTTCTGTGGACTCTGTCTTCATTTCTCCCACTGATTTTAAGCCCACCTTCAAATGA

mRNA sequence

ATGGGGGCTTCCTTTGCCAAACACTCCAATCTCCCTTCCTCTCCTTCCTCCTCCGATTCCTCTTCTCTGGAAGACATACCGGAAAATTGTATTTCCATTGTCTTCATGTACTTGGATCCTCCCGAGATTTGCAATCTTGCCTCTCTTAATCGAGCCTTTCGTGCTGCTTCTTCCGCTGATTTCGTTTGGGAATCCAAACTCCCTCCCAATTACAACTTCTTACTTCATCGAGTTCTTCATCCTCAATTGTGCCAGCCTAAGAAACACATCTTCGCTACCCTCACTCGCCCTTATCTCTTTGATCATGCCACCAAGGAGGTTTGGTTGGATAAAAGTTCTGGAAAAATTTTTGTTTCTATTTCATCCAAGGCTCTGAAGATTACAGGGATCGATGATAGAAGATATTGGAACTATATTCCAACTGATGAATCAAGGTTTGGGACAGTGGCATATTTGAAACAAATATGGTGGGTTGAAATAGGAGGAGAATTGGAGTTTGAGTTACCTAAGGGAAGCTACAGTGTATATTTCAGGCTTCAATTGGGGAAAGCTTCAAAGAAATTTGGAAGAAGATTTGTAGATGTGGATCAAGTTCATGGATGGGAACTTAAGCCAGTGAGATTTGAAGTCTCAGTTTCCAATGCCCAAAAAGCTTCATCTGAGTGTTATTTAAACCAATTTGGGAAATGGGTTTTGTATAAAGTGGGAGATTTTAGTGTTGAAACCCCTAATTTTGTAGCTCATATCAAATTTTCAATGATTCAAATTGATTGTACTCATACTAAAGGTGGCCTTTCTGTGGACTCTGTCTTCATTTCTCCCACTGATTTTAAGCCCACCTTCAAATGA

Coding sequence (CDS)

ATGGGGGCTTCCTTTGCCAAACACTCCAATCTCCCTTCCTCTCCTTCCTCCTCCGATTCCTCTTCTCTGGAAGACATACCGGAAAATTGTATTTCCATTGTCTTCATGTACTTGGATCCTCCCGAGATTTGCAATCTTGCCTCTCTTAATCGAGCCTTTCGTGCTGCTTCTTCCGCTGATTTCGTTTGGGAATCCAAACTCCCTCCCAATTACAACTTCTTACTTCATCGAGTTCTTCATCCTCAATTGTGCCAGCCTAAGAAACACATCTTCGCTACCCTCACTCGCCCTTATCTCTTTGATCATGCCACCAAGGAGGTTTGGTTGGATAAAAGTTCTGGAAAAATTTTTGTTTCTATTTCATCCAAGGCTCTGAAGATTACAGGGATCGATGATAGAAGATATTGGAACTATATTCCAACTGATGAATCAAGGTTTGGGACAGTGGCATATTTGAAACAAATATGGTGGGTTGAAATAGGAGGAGAATTGGAGTTTGAGTTACCTAAGGGAAGCTACAGTGTATATTTCAGGCTTCAATTGGGGAAAGCTTCAAAGAAATTTGGAAGAAGATTTGTAGATGTGGATCAAGTTCATGGATGGGAACTTAAGCCAGTGAGATTTGAAGTCTCAGTTTCCAATGCCCAAAAAGCTTCATCTGAGTGTTATTTAAACCAATTTGGGAAATGGGTTTTGTATAAAGTGGGAGATTTTAGTGTTGAAACCCCTAATTTTGTAGCTCATATCAAATTTTCAATGATTCAAATTGATTGTACTCATACTAAAGGTGGCCTTTCTGTGGACTCTGTCTTCATTTCTCCCACTGATTTTAAGCCCACCTTCAAATGA

Protein sequence

MGASFAKHSNLPSSPSSSDSSSLEDIPENCISIVFMYLDPPEICNLASLNRAFRAASSADFVWESKLPPNYNFLLHRVLHPQLCQPKKHIFATLTRPYLFDHATKEVWLDKSSGKIFVSISSKALKITGIDDRRYWNYIPTDESRFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVDVDQVHGWELKPVRFEVSVSNAQKASSECYLNQFGKWVLYKVGDFSVETPNFVAHIKFSMIQIDCTHTKGGLSVDSVFISPTDFKPTFK

Homology

[Close]

BLAST of Cla002335 vs. Swiss-Prot
Match: P2A14_ARATH (F-box protein PP2-A14 OS=Arabidopsis thaliana GN=PP2A14 PE=1 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 2.2e-87
Identity = 155/290 (53.45%), Postives = 202/290 (69.66%), Query Frame = 1


Query: 1   MGASFAKHSNLPSSPSSSDSSSLEDIPENCISIVFMYLDPPEICNLASLNRAFRAASSAD 60
           MGA  A  S + S P +     LED+PENCI+ +FMY++PPEIC LA +N++F  AS +D
Sbjct: 1   MGA--ASSSIVRSEPFAGKLCGLEDVPENCITAMFMYMEPPEICLLARVNKSFHRASRSD 60

Query: 61  FVWESKLPPNYNFLLHRVLHPQ--------LCQPKKHIFATLTRPYLFDHATKEVWLDKS 120
            VWE KLP NY FL+ R+L  Q        L   KK I+A L RP LFD  TKE WLDK 
Sbjct: 61  AVWEDKLPSNYKFLVRRILEDQQQVGVKDKLIYRKKEIYARLCRPNLFDTGTKEAWLDKR 120

Query: 121 SGKIFVSISSKALKITGIDDRRYWNYIPTDESRFGTVAYLKQIWWVEIGGELEFELPKGS 180
           SGK+F++IS KA+KITGIDDRRYW +I +DESRFG++ YL+QIWW+E  G++ FE   G 
Sbjct: 121 SGKVFLAISPKAMKITGIDDRRYWEHISSDESRFGSITYLRQIWWLEAVGKIRFEFAPGK 180

Query: 181 YSVYFRLQLGKASKKFGRRFVDVDQVHGWELKPVRFEVSVSNAQKASSECYLNQFGKWVL 240
           YS+ F++QLGK  +K GR+   +DQVHGW++KPVRF++S S+ Q A SE +L++ G+WV 
Sbjct: 181 YSLLFKIQLGKPIRKCGRKTCSLDQVHGWDIKPVRFQLSTSDGQCAMSERHLDESGRWVY 240

Query: 241 YKVGDFSVETPNFVAHIKFSMIQIDCTHTKGGLSVDSVFISPTDFKPTFK 283
           +  GDF VE  N    +KFSM+QIDCTHTKGGL +D V I P +++  +K
Sbjct: 241 HHAGDFVVENQNSPVWVKFSMLQIDCTHTKGGLCLDCVIICPFEYRGKYK 288

[Close]

BLAST of Cla002335 vs. Swiss-Prot
Match: P2A13_ARATH (F-box protein PP2-A13 OS=Arabidopsis thaliana GN=PP2A13 PE=1 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 8.4e-87
Identity = 148/257 (57.59%), Postives = 191/257 (74.32%), Query Frame = 1


Query: 23  LEDIPENCISIVFMYLDPPEICNLASLNRAFRAASSADFVWESKLPPNYNFLLHRVLHPQ 82
           L D+PENC++++   LDPPEIC LA LNR FR ASSADF+WESKLP NY  + H+V    
Sbjct: 25  LVDLPENCVALIMTRLDPPEICRLARLNRMFRRASSADFIWESKLPANYRVIAHKVFDEI 84

Query: 83  LCQP--KKHIFATLTRPYLFDHATKEVWLDKSSGKIFVSISSKALKITGIDDRRYWNYIP 142
                 KK ++A L++P LFD  TKE+W+DK++G++ +SISSKAL+ITGIDDRRYW++IP
Sbjct: 85  TLTKLIKKDLYAKLSQPNLFDDGTKELWIDKNTGRLCLSISSKALRITGIDDRRYWSHIP 144

Query: 143 TDESRFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVDVDQVHG 202
           TDESRF + AY++QIWW E+GGE E + P G+YS++FR+QLGK SK+ GRR  + + +HG
Sbjct: 145 TDESRFQSAAYVQQIWWFEVGGEFEIQFPSGTYSLFFRIQLGKTSKRLGRRICNSEHIHG 204

Query: 203 WELKPVRFEVSVSNAQKASSECYLNQF-GKWVLYKVGDFSVETPNFVAHIKFSMIQIDCT 262
           W++KPVRF+++ S+ Q+A S CYLN   G W  Y VGDF V  P+    IKFSM QIDCT
Sbjct: 205 WDIKPVRFQLATSDNQQAVSLCYLNNNPGSWSHYHVGDFKVTNPDVSTGIKFSMTQIDCT 264

Query: 263 HTKGGLSVDSVFISPTD 277
           HTKGGL +DSV I P +
Sbjct: 265 HTKGGLCIDSVLILPKE 281

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BLAST of Cla002335 vs. Swiss-Prot
Match: P2A12_ARATH (F-box protein PP2-A12 OS=Arabidopsis thaliana GN=P2A12 PE=2 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 9.0e-81
Identity = 149/282 (52.84%), Postives = 197/282 (69.86%), Query Frame = 1


Query: 8   HSNLPSSPSSSDSSSLE----DIPENCISIVFMYLDPPEICNLASLNRAFRAASSADFVW 67
           H++L SS    D + L+    D+PE C++I+   LDP EIC  + LNRAFR AS AD VW
Sbjct: 9   HNDLSSSSCFGDRNILKPGLGDLPEACVAIIVENLDPVEICRFSKLNRAFRGASWADCVW 68

Query: 68  ESKLPPNYNFLLHRVL--HPQLCQPKKHIFATLTRPYLFDHATKEVWLDKSSGKIFVSIS 127
           ESKLP NY  +L ++L   P+  Q K+H++A L+R   FD ATK+VW+DK +  + +SIS
Sbjct: 69  ESKLPQNYRDVLEKILGGFPENLQ-KRHLYAFLSRINSFDDATKKVWIDKRTSGVCLSIS 128

Query: 128 SKALKITGIDDRRYWNYIPTDESRFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQL 187
           +K L ITGIDDRRYW++IPTDESRF +VAYL+QIWW E+ GE++F  P G+YS++FRLQL
Sbjct: 129 AKGLSITGIDDRRYWSHIPTDESRFSSVAYLQQIWWFEVDGEIDFPFPVGTYSIFFRLQL 188

Query: 188 GKASKKFGRRFVDVDQVHGWELKPVRFEVSVSNAQKASSECYLNQFGKWVLYKVGDFSV- 247
           G++ K FGRR  + +QVHGW++KPVRF++   + Q +SS+C L + G W+ Y  GD  V 
Sbjct: 189 GRSGKWFGRRVCNTEQVHGWDIKPVRFQLWTEDGQYSSSQCMLTERGNWIHYHAGDVVVR 248

Query: 248 ETPNFVAHIKFSMIQIDCTHTKGGLSVDSVFISPTDFKPTFK 283
           E+      IKFSM QIDCTHTKGGLS+DSV + P+  K   K
Sbjct: 249 ESNRSSTKIKFSMTQIDCTHTKGGLSLDSVVVYPSSCKDQLK 289

[Close]

BLAST of Cla002335 vs. Swiss-Prot
Match: P2A11_ARATH (F-box protein PP2-A11 OS=Arabidopsis thaliana GN=PP2A11 PE=1 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.2e-77
Identity = 143/284 (50.35%), Postives = 190/284 (66.90%), Query Frame = 1


Query: 1   MGASFAK-HSNLPSSPSSSD--SSSLEDIPENCISIVFMYLDPPEICNLASLNRAFRAAS 60
           MG+ F+    NL S     D     L D+PE+C++++   LDP EIC  + LN AF  AS
Sbjct: 1   MGSGFSLFQKNLSSCYGDRDLLQPGLGDLPESCVALILQNLDPVEICRFSKLNTAFHGAS 60

Query: 61  SADFVWESKLPPNYNFLLHRVL--HPQLCQPKKHIFATLTRPYLFDHATKEVWLDKSSGK 120
            ADFVWESKLPP+Y  +L ++L   P   + K+ IF  L+R   FD   K+ W+DK +G 
Sbjct: 61  WADFVWESKLPPDYKLILEKILGSFPDNLR-KRDIFTFLSRVNSFDEGNKKAWVDKRTGG 120

Query: 121 IFVSISSKALKITGIDDRRYWNYIPTDESRFGTVAYLKQIWWVEIGGELEFELPKGSYSV 180
           + +  S+K L ITGIDDRRYW++IP+D+SRF +VAY++QIWW ++ GE++F  P G+YSV
Sbjct: 121 LCLCTSAKGLSITGIDDRRYWSHIPSDDSRFASVAYVQQIWWFQVDGEIDFPFPAGTYSV 180

Query: 181 YFRLQLGKASKKFGRRFVDVDQVHGWELKPVRFEVSVSNAQKASSECYLNQFGKWVLYKV 240
           YFRLQLGK  K+FG + VD +QVHGW +KPVRF++S  + Q +SS+C L + G W  Y  
Sbjct: 181 YFRLQLGKPGKRFGWKVVDTEQVHGWNIKPVRFQLSTEDGQHSSSQCMLTEAGNWSHYHA 240

Query: 241 GDFSV-ETPNFVAHIKFSMIQIDCTHTKGGLSVDSVFISPTDFK 279
           GDF V ++ +    IKFSM QIDCTHTKGGL VDSV + P+  K
Sbjct: 241 GDFVVGKSKSSSTKIKFSMTQIDCTHTKGGLCVDSVVVYPSSCK 283

[Close]

BLAST of Cla002335 vs. Swiss-Prot
Match: P2A15_ARATH (F-box protein PP2-A15 OS=Arabidopsis thaliana GN=PP2A15 PE=2 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.3e-76
Identity = 142/265 (53.58%), Postives = 183/265 (69.06%), Query Frame = 1


Query: 23  LEDIPENCISIVFMYLDPPEICNLASLNRAFRAASSADFVWESKLPPNYNFLLHRVLHPQ 82
           L DIPE+C++ VFMYL PPEICNLA LNR+FR A+S+D VWE KLP NY  LL  +L P+
Sbjct: 21  LGDIPESCVACVFMYLTPPEICNLAGLNRSFRGAASSDSVWEKKLPENYQDLLD-LLPPE 80

Query: 83  LCQP--KKHIFATLTRPYLFDHATKEVWLDKSSGKIFVSISSKALKITGIDDRRYWNYIP 142
                 KK IFA L+RP  FD   KEVW+D+ +G++ ++IS++ + ITGI+DRRYWN+IP
Sbjct: 81  RYHSLSKKDIFAVLSRPIPFDDDNKEVWIDRVTGRVCMAISARGMSITGIEDRRYWNWIP 140

Query: 143 TDESRFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVDVDQVHG 202
           T+ESRF  VAYL+QIWW E+ G + F LP G YS+ FR+ LG+ +K+ GRR    +  HG
Sbjct: 141 TEESRFHVVAYLQQIWWFEVDGTVRFHLPPGVYSLSFRIHLGRFTKRLGRRVCHFELTHG 200

Query: 203 WELKPVRFEVSVSNAQKASSECYLNQF-----------GKWVLYKVGDFSVETPNFVAHI 262
           W+LKPVRF +S S+ Q+AS E YL+             G W+ Y+VG+F V        I
Sbjct: 201 WDLKPVRFSLSTSDGQEASCEYYLDDVERNEALGKHKRGYWIEYRVGEFIVNGSEPSTEI 260

Query: 263 KFSMIQIDCTHTKGGLSVDSVFISP 275
           ++SM QIDCTH+KGGL VDSVFI+P
Sbjct: 261 QWSMKQIDCTHSKGGLCVDSVFINP 284

[Close]

BLAST of Cla002335 vs. TrEMBL
Match: A0A0A0KL73_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G173520 PE=4 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 7.8e-132
Identity = 241/289 (83.39%), Postives = 254/289 (87.89%), Query Frame = 1


Query: 1   MGASFAKHS-NLPSSPSSSDSSSLEDIPENCISIVFMYLDPPEICNLASLNRAFRAASSA 60
           MGASFAK S NLP S SSS SSSLEDIPENCISIV MYLDPPEICNLASL+ AFR+ SSA
Sbjct: 1   MGASFAKLSTNLPPS-SSSTSSSLEDIPENCISIVLMYLDPPEICNLASLSHAFRSTSSA 60

Query: 61  DFVWESKLPPNYNFLLHRVLH-PQLCQPKKHIFATLTRPYLFDHATKEVWLDKSSGKIFV 120
           DFVWESKLP NY FLLHRVL  P L  PKK IFA LTRP  FDHATKE WLDK SGK F+
Sbjct: 61  DFVWESKLPSNYIFLLHRVLQLPLLTHPKKEIFARLTRPCPFDHATKEFWLDKKSGKNFI 120

Query: 121 SISSKALKITGIDDRRYWNYIPTDESRFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFR 180
           SISSKALKITGIDDRRYWNYIPTDESR+G+VAYLKQIWWVEIGGE+EFELPKG YSVYFR
Sbjct: 121 SISSKALKITGIDDRRYWNYIPTDESRYGSVAYLKQIWWVEIGGEMEFELPKGKYSVYFR 180

Query: 181 LQLGKASKKFGRRFVDVDQVHGWELKPVRFEVSVS-----NAQKASSECYLNQFGKWVLY 240
           +QLGK+SKKFGRRF+DVD+VHGWELKPVRFE+SVS     N QK SSE YLNQFGKWVLY
Sbjct: 181 VQLGKSSKKFGRRFIDVDEVHGWELKPVRFELSVSNNNNKNGQKVSSEFYLNQFGKWVLY 240

Query: 241 KVGDFSVETPNFVAHIKFSMIQIDCTHTKGGLSVDSVFISPTDFKPTFK 283
           KVGDF +E+PNFVA IKFSMIQIDCTHTKGGLSVDSVFI P DFKPTFK
Sbjct: 241 KVGDFCIESPNFVAQIKFSMIQIDCTHTKGGLSVDSVFICPNDFKPTFK 288

[Close]

BLAST of Cla002335 vs. TrEMBL
Match: A0A061FZX2_THECC (Phloem protein 2-A13 OS=Theobroma cacao GN=TCM_015102 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 9.7e-98
Identity = 173/262 (66.03%), Postives = 212/262 (80.92%), Query Frame = 1


Query: 23  LEDIPENCISIVFMYLDPPEICNLASLNRAFRAASSADFVWESKLPPNYNFLLHRVL--H 82
           L+D+PE+CIS +FMYLDPPEIC LASLNRAFR AS ADFVWE+KLP NY +L+ +VL   
Sbjct: 22  LDDVPESCISSIFMYLDPPEICKLASLNRAFRGASLADFVWETKLPSNYRYLVKKVLGQS 81

Query: 83  PQLCQPKKHIFATLTRPYLFDHATKEVWLDKSSGKIFVSISSKALKITGIDDRRYWNYIP 142
           P+    +K  +A L RP  FD  TKEVWLDK+SGK+ +++S+KALKITGIDDRRYWN+IP
Sbjct: 82  PETLS-QKETYARLCRPNRFDGGTKEVWLDKNSGKLCLAVSAKALKITGIDDRRYWNHIP 141

Query: 143 TDESRFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVDVDQVHG 202
           T+ESRF TVAYL+QIWW E+ GEL+FE P G+YS++FRLQLGK+SK+FGRR  ++DQVHG
Sbjct: 142 TEESRFQTVAYLQQIWWFEVVGELDFEFPPGAYSLFFRLQLGKSSKRFGRRVCNLDQVHG 201

Query: 203 WELKPVRFEVSVSNAQKASSECYLNQFGKWVLYKVGDFSVETPNFVAHIKFSMIQIDCTH 262
           W +KPVRF++S SN Q+ASSECYL + G WV Y VGDF +E  N  A IKFSM+QIDCTH
Sbjct: 202 WNIKPVRFQLSTSNGQQASSECYLYEPGNWVHYHVGDFVIENSNSPAKIKFSMMQIDCTH 261

Query: 263 TKGGLSVDSVFISPTDFKPTFK 283
           TKGGL VDSV I P++F+   K
Sbjct: 262 TKGGLCVDSVLIYPSEFRQRLK 282

[Close]

BLAST of Cla002335 vs. TrEMBL
Match: V4RLL0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005557mg PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 3.1e-96
Identity = 172/268 (64.18%), Postives = 214/268 (79.85%), Query Frame = 1


Query: 17  SSDSSSLEDIPENCISIVFMYLDPPEICNLASLNRAFRAASSADFVWESKLPPNYNFLLH 76
           SS SSSL D+PE+C+S +FM+LDPPEIC LA LN+ FR ASSADF+WE+KLP NY +L+ 
Sbjct: 16  SSSSSSLNDVPESCVSSIFMHLDPPEICKLALLNKTFRGASSADFLWETKLPSNYKYLVK 75

Query: 77  RVLH--PQLCQPKKHIFATLTRPYLFDHATKEVWLDKSSGKIFVSISSKALKITGIDDRR 136
           +VL+  PQ    KK I+A L++P  FD+ATKE+WLDK SGK+ +SIS+K++KITGIDDRR
Sbjct: 76  KVLNESPQKLT-KKEIYARLSQPNRFDNATKEIWLDKRSGKVCMSISAKSMKITGIDDRR 135

Query: 137 YWNYIPTDESRFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVD 196
           YWN I T+ESRF +VAYL+Q WW E  GELEFE P+G+YS++FRLQLGKASK+FGRR  +
Sbjct: 136 YWNQIATEESRFHSVAYLQQTWWCEAIGELEFEFPQGTYSLFFRLQLGKASKRFGRRICN 195

Query: 197 VDQVHGWELKPVRFEVSVSNAQKASSECYLNQFGKWVLYKVGDFSVETPNFVAHIKFSMI 256
           ++QVHGW++KPVRF++S SN QKA SEC L   G WVLY VGDF+VE       IKFSM+
Sbjct: 196 LEQVHGWDVKPVRFQLSTSNGQKAVSECCLYDPGNWVLYHVGDFAVENDQTSTKIKFSMM 255

Query: 257 QIDCTHTKGGLSVDSVFISPTDFKPTFK 283
           QIDCTHTKGGL +DSV I P++FK   K
Sbjct: 256 QIDCTHTKGGLCIDSVLIYPSEFKERLK 282

[Close]

BLAST of Cla002335 vs. TrEMBL
Match: A0A067F1U0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022971mg PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 2.6e-95
Identity = 170/268 (63.43%), Postives = 213/268 (79.48%), Query Frame = 1


Query: 17  SSDSSSLEDIPENCISIVFMYLDPPEICNLASLNRAFRAASSADFVWESKLPPNYNFLLH 76
           S+ S SL D+PE+C+S +FM+LDPPEIC LA LN+ FR ASSADF+WE+KLP NY +L+ 
Sbjct: 16  STSSPSLNDVPESCVSSIFMHLDPPEICKLALLNKTFRGASSADFLWETKLPSNYKYLVK 75

Query: 77  RVLH--PQLCQPKKHIFATLTRPYLFDHATKEVWLDKSSGKIFVSISSKALKITGIDDRR 136
           +VL+  PQ    KK I+A L++P  FD+ATKE+WLDK SGK+ +SIS+K++KITGIDDRR
Sbjct: 76  KVLNESPQKLT-KKEIYARLSQPNRFDNATKEIWLDKRSGKVCMSISAKSMKITGIDDRR 135

Query: 137 YWNYIPTDESRFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVD 196
           YWN I T+ESRF +VAYL+Q WW E  GELEFE P+G+YS++FRLQLGKASK+FGRR  +
Sbjct: 136 YWNQIATEESRFHSVAYLQQTWWCEAIGELEFEFPQGTYSLFFRLQLGKASKRFGRRICN 195

Query: 197 VDQVHGWELKPVRFEVSVSNAQKASSECYLNQFGKWVLYKVGDFSVETPNFVAHIKFSMI 256
           ++QVHGW++KPVRF++S SN QKA SEC L   G WVLY VGDF+VE       IKFSM+
Sbjct: 196 LEQVHGWDVKPVRFQLSTSNGQKAVSECCLYDPGNWVLYHVGDFAVENDQTSTKIKFSMM 255

Query: 257 QIDCTHTKGGLSVDSVFISPTDFKPTFK 283
           QIDCTHTKGGL +DSV I P++FK   K
Sbjct: 256 QIDCTHTKGGLCIDSVLIYPSEFKERLK 282

[Close]

BLAST of Cla002335 vs. TrEMBL
Match: A0A0B2P0K2_GLYSO (F-box protein PP2-A13 OS=Glycine soja GN=glysoja_016042 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 5.9e-95
Identity = 175/272 (64.34%), Postives = 207/272 (76.10%), Query Frame = 1


Query: 13  SSPSSSDSSSLEDIPENCISIVFMYLDPPEICNLASLNRAFRAASSADFVWESKLPPNYN 72
           SS S      L DIPE+CIS +FM LDPP+IC LA +NRAF  ASSADFVWESKLPP+Y 
Sbjct: 20  SSSSRDSRPGLGDIPESCISSLFMNLDPPDICKLARVNRAFHRASSADFVWESKLPPSYK 79

Query: 73  FLLHRVLHPQ--LCQPKKHIFATLTRPYLFDHATKEVWLDKSSGKIFVSISSKALKITGI 132
           FL ++VL  +      KK I+A L  P  FD  TKEVWLDK SG++ + +SSK+LKITGI
Sbjct: 80  FLANKVLGEENIATMTKKEIYAKLCLPNRFDGGTKEVWLDKCSGQVCLFMSSKSLKITGI 139

Query: 133 DDRRYWNYIPTDESRFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGR 192
           DDRRYWNYIPT+ESRF +VAYL+Q+WWVE+ GELEFE P GSYS+ FRLQLGKASK+ GR
Sbjct: 140 DDRRYWNYIPTEESRFQSVAYLQQMWWVEVVGELEFEFPVGSYSLIFRLQLGKASKRLGR 199

Query: 193 RFVDVDQVHGWELKPVRFEVSVSNAQKASSECYLNQFGKWVLYKVGDFSVETPNFVAHIK 252
           R  +VDQVHGW++KPVRF++S S+ Q + SECYL   G+WV Y VGDF VE PN   +IK
Sbjct: 200 RVCNVDQVHGWDIKPVRFQLSTSDGQLSLSECYLCGPGEWVYYHVGDFVVEKPNEPINIK 259

Query: 253 FSMIQIDCTHTKGGLSVDSVFISPTDFKPTFK 283
           FS+ QIDCTHTKGGL VDS  I PT+FK   K
Sbjct: 260 FSLAQIDCTHTKGGLCVDSAIICPTEFKERLK 291

[Close]

BLAST of Cla002335 vs. NCBI nr
Match: gi|449451759|ref|XP_004143628.1| (PREDICTED: F-box protein PP2-A14 isoform X1 [Cucumis sativus])

HSP 1 Score: 478.0 bits (1229), Expect = 1.1e-131
Identity = 241/289 (83.39%), Postives = 254/289 (87.89%), Query Frame = 1


Query: 1   MGASFAKHS-NLPSSPSSSDSSSLEDIPENCISIVFMYLDPPEICNLASLNRAFRAASSA 60
           MGASFAK S NLP S SSS SSSLEDIPENCISIV MYLDPPEICNLASL+ AFR+ SSA
Sbjct: 1   MGASFAKLSTNLPPS-SSSTSSSLEDIPENCISIVLMYLDPPEICNLASLSHAFRSTSSA 60

Query: 61  DFVWESKLPPNYNFLLHRVLH-PQLCQPKKHIFATLTRPYLFDHATKEVWLDKSSGKIFV 120
           DFVWESKLP NY FLLHRVL  P L  PKK IFA LTRP  FDHATKE WLDK SGK F+
Sbjct: 61  DFVWESKLPSNYIFLLHRVLQLPLLTHPKKEIFARLTRPCPFDHATKEFWLDKKSGKNFI 120

Query: 121 SISSKALKITGIDDRRYWNYIPTDESRFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFR 180
           SISSKALKITGIDDRRYWNYIPTDESR+G+VAYLKQIWWVEIGGE+EFELPKG YSVYFR
Sbjct: 121 SISSKALKITGIDDRRYWNYIPTDESRYGSVAYLKQIWWVEIGGEMEFELPKGKYSVYFR 180

Query: 181 LQLGKASKKFGRRFVDVDQVHGWELKPVRFEVSVS-----NAQKASSECYLNQFGKWVLY 240
           +QLGK+SKKFGRRF+DVD+VHGWELKPVRFE+SVS     N QK SSE YLNQFGKWVLY
Sbjct: 181 VQLGKSSKKFGRRFIDVDEVHGWELKPVRFELSVSNNNNKNGQKVSSEFYLNQFGKWVLY 240

Query: 241 KVGDFSVETPNFVAHIKFSMIQIDCTHTKGGLSVDSVFISPTDFKPTFK 283
           KVGDF +E+PNFVA IKFSMIQIDCTHTKGGLSVDSVFI P DFKPTFK
Sbjct: 241 KVGDFCIESPNFVAQIKFSMIQIDCTHTKGGLSVDSVFICPNDFKPTFK 288

[Close]

BLAST of Cla002335 vs. NCBI nr
Match: gi|659073025|ref|XP_008467221.1| (PREDICTED: LOW QUALITY PROTEIN: F-box protein PP2-A14 [Cucumis melo])

HSP 1 Score: 473.8 bits (1218), Expect = 2.1e-130
Identity = 240/289 (83.04%), Postives = 253/289 (87.54%), Query Frame = 1


Query: 1   MGASFAKHS-NLPSSPSSSDSSSLEDIPENCISIVFMYLDPPEICNLASLNRAFRAASSA 60
           MGASFAK S NLP S SSS SS LEDIPENCISIVFMYLDPPEICNLASLN AFR++SSA
Sbjct: 1   MGASFAKVSTNLPPS-SSSTSSPLEDIPENCISIVFMYLDPPEICNLASLNHAFRSSSSA 60

Query: 61  DFVWESKLPPNYNFLLHRVLHPQ--LCQPKKHIFATLTRPYLFDHATKEVWLDKSSGKIF 120
           DFVWESKLP NY FLLHRVL  Q     PKK IFATLTRP LFDHATKE WLDK SG+ F
Sbjct: 61  DFVWESKLPSNYIFLLHRVLQLQQLTAHPKKEIFATLTRPSLFDHATKEFWLDKKSGENF 120

Query: 121 VSISSKALKITGIDDRRYWNYIPTDESRFGTVAYLKQIWWVEIGGELEFELPKGSYSVYF 180
           +SISSKALKITGIDDRRYWNYIPTDESR+G+VAYLKQIWWVEIGGELEFELPKG YSVYF
Sbjct: 121 ISISSKALKITGIDDRRYWNYIPTDESRYGSVAYLKQIWWVEIGGELEFELPKGKYSVYF 180

Query: 181 RLQLGKASKKFGRRFVDVDQVHGWELKPVRFEVSVS-----NAQKASSECYLNQFGKWVL 240
           R+QLGK+SKKFGRRF+DV +VHGWELKPVRFE+SVS     N QK SSE YLNQFGKWVL
Sbjct: 181 RVQLGKSSKKFGRRFIDVGEVHGWELKPVRFELSVSNNNNKNGQKVSSEFYLNQFGKWVL 240

Query: 241 YKVGDFSVETPNFVAHIKFSMIQIDCTHTKGGLSVDSVFISPTDFKPTF 282
           YKVGDF +E+PNFVA IKFSMIQIDCTHTKGGLSVDSVFI P  FKPTF
Sbjct: 241 YKVGDFCIESPNFVAQIKFSMIQIDCTHTKGGLSVDSVFICPHHFKPTF 288

[Close]

BLAST of Cla002335 vs. NCBI nr
Match: gi|590672411|ref|XP_007038604.1| (Phloem protein 2-A13 [Theobroma cacao])

HSP 1 Score: 364.8 bits (935), Expect = 1.4e-97
Identity = 173/262 (66.03%), Postives = 212/262 (80.92%), Query Frame = 1


Query: 23  LEDIPENCISIVFMYLDPPEICNLASLNRAFRAASSADFVWESKLPPNYNFLLHRVL--H 82
           L+D+PE+CIS +FMYLDPPEIC LASLNRAFR AS ADFVWE+KLP NY +L+ +VL   
Sbjct: 22  LDDVPESCISSIFMYLDPPEICKLASLNRAFRGASLADFVWETKLPSNYRYLVKKVLGQS 81

Query: 83  PQLCQPKKHIFATLTRPYLFDHATKEVWLDKSSGKIFVSISSKALKITGIDDRRYWNYIP 142
           P+    +K  +A L RP  FD  TKEVWLDK+SGK+ +++S+KALKITGIDDRRYWN+IP
Sbjct: 82  PETLS-QKETYARLCRPNRFDGGTKEVWLDKNSGKLCLAVSAKALKITGIDDRRYWNHIP 141

Query: 143 TDESRFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVDVDQVHG 202
           T+ESRF TVAYL+QIWW E+ GEL+FE P G+YS++FRLQLGK+SK+FGRR  ++DQVHG
Sbjct: 142 TEESRFQTVAYLQQIWWFEVVGELDFEFPPGAYSLFFRLQLGKSSKRFGRRVCNLDQVHG 201

Query: 203 WELKPVRFEVSVSNAQKASSECYLNQFGKWVLYKVGDFSVETPNFVAHIKFSMIQIDCTH 262
           W +KPVRF++S SN Q+ASSECYL + G WV Y VGDF +E  N  A IKFSM+QIDCTH
Sbjct: 202 WNIKPVRFQLSTSNGQQASSECYLYEPGNWVHYHVGDFVIENSNSPAKIKFSMMQIDCTH 261

Query: 263 TKGGLSVDSVFISPTDFKPTFK 283
           TKGGL VDSV I P++F+   K
Sbjct: 262 TKGGLCVDSVLIYPSEFRQRLK 282

[Close]

BLAST of Cla002335 vs. NCBI nr
Match: gi|1009122490|ref|XP_015878029.1| (PREDICTED: F-box protein PP2-A14 [Ziziphus jujuba])

HSP 1 Score: 360.1 bits (923), Expect = 3.4e-96
Identity = 178/285 (62.46%), Postives = 213/285 (74.74%), Query Frame = 1


Query: 1   MGASFAKHSNLPSSPSSSDSSS--LEDIPENCISIVFMYLDPPEICNLASLNRAFRAASS 60
           MG  F+    + +S SS   S   L D+P+NCIS +F YLDPPEIC  + LNR FR AS 
Sbjct: 1   MGTGFSAFFAIETSGSSLPPSKPGLGDLPDNCISSIFTYLDPPEICKFSRLNRTFRGASL 60

Query: 61  ADFVWESKLPPNYNFLLHRVLH----PQLCQPKKHIFATLTRPYLFDHATKEVWLDKSSG 120
           ADFVWESKLP NY FL+H+V++    P     KK I+A L +P   D  TKEVWLDK+SG
Sbjct: 61  ADFVWESKLPSNYKFLVHKVVNENEKPDKRLSKKEIYANLCQPNRLDGGTKEVWLDKTSG 120

Query: 121 KIFVSISSKALKITGIDDRRYWNYIPTDESRFGTVAYLKQIWWVEIGGELEFELPKGSYS 180
           K+F+SISSKAL+ITGIDDRRYWN+I T+ESRF TVAYL+QIWWVE+ GELEFE P GSYS
Sbjct: 121 KVFLSISSKALRITGIDDRRYWNFISTEESRFHTVAYLQQIWWVEVLGELEFEFPPGSYS 180

Query: 181 VYFRLQLGK-ASKKFGRRFVDVDQVHGWELKPVRFEVSVSNAQKASSECYLNQFGKWVLY 240
           + FRLQLGK  + +FGRR   VDQVHGW+ KPVRF+++ SN Q+ASSECYL Q G W+ Y
Sbjct: 181 LCFRLQLGKPTTTRFGRRICAVDQVHGWDAKPVRFQLATSNGQRASSECYLKQQGTWIHY 240

Query: 241 KVGDFSVETPNFVAHIKFSMIQIDCTHTKGGLSVDSVFISPTDFK 279
            VGDF VE  N    IKFSM+QIDCTHTKGGL +DSV I P++F+
Sbjct: 241 HVGDFVVENTNMPIKIKFSMVQIDCTHTKGGLCLDSVLICPSEFR 285

[Close]

BLAST of Cla002335 vs. NCBI nr
Match: gi|567858360|ref|XP_006421863.1| (hypothetical protein CICLE_v10005557mg [Citrus clementina])

HSP 1 Score: 359.8 bits (922), Expect = 4.5e-96
Identity = 172/268 (64.18%), Postives = 214/268 (79.85%), Query Frame = 1


Query: 17  SSDSSSLEDIPENCISIVFMYLDPPEICNLASLNRAFRAASSADFVWESKLPPNYNFLLH 76
           SS SSSL D+PE+C+S +FM+LDPPEIC LA LN+ FR ASSADF+WE+KLP NY +L+ 
Sbjct: 16  SSSSSSLNDVPESCVSSIFMHLDPPEICKLALLNKTFRGASSADFLWETKLPSNYKYLVK 75

Query: 77  RVLH--PQLCQPKKHIFATLTRPYLFDHATKEVWLDKSSGKIFVSISSKALKITGIDDRR 136
           +VL+  PQ    KK I+A L++P  FD+ATKE+WLDK SGK+ +SIS+K++KITGIDDRR
Sbjct: 76  KVLNESPQKLT-KKEIYARLSQPNRFDNATKEIWLDKRSGKVCMSISAKSMKITGIDDRR 135

Query: 137 YWNYIPTDESRFGTVAYLKQIWWVEIGGELEFELPKGSYSVYFRLQLGKASKKFGRRFVD 196
           YWN I T+ESRF +VAYL+Q WW E  GELEFE P+G+YS++FRLQLGKASK+FGRR  +
Sbjct: 136 YWNQIATEESRFHSVAYLQQTWWCEAIGELEFEFPQGTYSLFFRLQLGKASKRFGRRICN 195

Query: 197 VDQVHGWELKPVRFEVSVSNAQKASSECYLNQFGKWVLYKVGDFSVETPNFVAHIKFSMI 256
           ++QVHGW++KPVRF++S SN QKA SEC L   G WVLY VGDF+VE       IKFSM+
Sbjct: 196 LEQVHGWDVKPVRFQLSTSNGQKAVSECCLYDPGNWVLYHVGDFAVENDQTSTKIKFSMM 255

Query: 257 QIDCTHTKGGLSVDSVFISPTDFKPTFK 283
           QIDCTHTKGGL +DSV I P++FK   K
Sbjct: 256 QIDCTHTKGGLCIDSVLIYPSEFKERLK 282

The following BLAST results are available for this feature:

BLAST of Cla002335 vs. Swiss-Prot


Match Name	E-value	Identity	Description
P2A14_ARATH	2.2e-87	53.45	F-box protein PP2-A14 OS=Arabidopsis thaliana GN=PP2A14 PE=1 SV=1	[more]
P2A13_ARATH	8.4e-87	57.59	F-box protein PP2-A13 OS=Arabidopsis thaliana GN=PP2A13 PE=1 SV=1	[more]
P2A12_ARATH	9.0e-81	52.84	F-box protein PP2-A12 OS=Arabidopsis thaliana GN=P2A12 PE=2 SV=1	[more]
P2A11_ARATH	1.2e-77	50.35	F-box protein PP2-A11 OS=Arabidopsis thaliana GN=PP2A11 PE=1 SV=1	[more]
P2A15_ARATH	1.3e-76	53.58	F-box protein PP2-A15 OS=Arabidopsis thaliana GN=PP2A15 PE=2 SV=1	[more]

BLAST of Cla002335 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KL73_CUCSA	7.8e-132	83.39	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G173520 PE=4 SV=1	[more]
A0A061FZX2_THECC	9.7e-98	66.03	Phloem protein 2-A13 OS=Theobroma cacao GN=TCM_015102 PE=4 SV=1	[more]
V4RLL0_9ROSI	3.1e-96	64.18	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005557mg PE=4 SV=1	[more]
A0A067F1U0_CITSI	2.6e-95	63.43	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022971mg PE=4 SV=1	[more]
A0A0B2P0K2_GLYSO	5.9e-95	64.34	F-box protein PP2-A13 OS=Glycine soja GN=glysoja_016042 PE=4 SV=1	[more]

BLAST of Cla002335 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449451759\|ref\|XP_004143628.1\|	1.1e-131	83.39	PREDICTED: F-box protein PP2-A14 isoform X1 [Cucumis sativus]	[more]
gi\|659073025\|ref\|XP_008467221.1\|	2.1e-130	83.04	PREDICTED: LOW QUALITY PROTEIN: F-box protein PP2-A14 [Cucumis melo]	[more]
gi\|590672411\|ref\|XP_007038604.1\|	1.4e-97	66.03	Phloem protein 2-A13 [Theobroma cacao]	[more]
gi\|1009122490\|ref\|XP_015878029.1\|	3.4e-96	62.46	PREDICTED: F-box protein PP2-A14 [Ziziphus jujuba]	[more]
gi\|567858360\|ref\|XP_006421863.1\|	4.5e-96	64.18	hypothetical protein CICLE_v10005557mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom
IPR025886	PP2-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU12635	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU78553	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla002335	Cla002335.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU12635	WMU12635	transcribed_cluster
WMU78553	WMU78553	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PROFILE	PS50181	FBOX	coord: 20..66 score: 1
IPR001810	F-box domain	unknown	SSF81383	F-box domain	coord: 19..120 score: 4.19
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 118..274 score: 1.3
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 18..65 score: 5.
None	No IPR available	PANTHER	PTHR31960	FAMILY NOT NAMED	coord: 2..282 score: 6.0E
None	No IPR available	PANTHER	PTHR31960:SF5	F-BOX PROTEIN PP2-A14	coord: 2..282 score: 6.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla002335	Cla97C01G005850	Watermelon (97103) v2	wmwmbB238
Cla002335	Csa5G173520	Cucumber (Chinese Long) v2	cuwmB411
Cla002335	MELO3C005373	Melon (DHL92) v3.5.1	mewmB031
Cla002335	ClCG01G005600	Watermelon (Charleston Gray)	wcgwmB145
Cla002335	CSPI05G08440	Wild cucumber (PI 183967)	cpiwmB419
Cla002335	Cucsa.166390	Cucumber (Gy14) v1	cgywmB308
Cla002335	CmaCh02G010430	Cucurbita maxima (Rimu)	cmawmB569
Cla002335	CmoCh02G010570	Cucurbita moschata (Rifu)	cmowmB564
Cla002335	Lsi09G005910	Bottle gourd (USVL1VR-Ls)	lsiwmB030
Cla002335	Cp4.1LG05g06870	Cucurbita pepo (Zucchini)	cpewmB710
Cla002335	CsGy5G005830	Cucumber (Gy14) v2	cgybwmB384
Cla002335	MELO3C005373.2	Melon (DHL92) v3.6.1	medwmB030
Cla002335	Carg08434	Silver-seed gourd	carwmB0710
Cla002335	CsaV3_5G005830	Cucumber (Chinese Long) v3	cucwmB436
Cla002335	Bhi12G000480	Wax gourd	wgowmB088

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla002335	Melon (DHL92) v3.6.1	medwmB064
Cla002335	Silver-seed gourd	carwmB0712
Cla002335	Silver-seed gourd	carwmB0737
Cla002335	Cucumber (Chinese Long) v3	cucwmB446
Cla002335	Watermelon (97103) v2	wmwmbB267
Cla002335	Wax gourd	wgowmB556
Cla002335	Watermelon (97103) v1	wmwmB124
Cla002335	Cucurbita maxima (Rimu)	cmawmB274
Cla002335	Cucurbita maxima (Rimu)	cmawmB280
Cla002335	Cucurbita moschata (Rifu)	cmowmB264
Cla002335	Cucurbita moschata (Rifu)	cmowmB270
Cla002335	Watermelon (Charleston Gray)	wcgwmB297
Cla002335	Cucurbita pepo (Zucchini)	cpewmB186
Cla002335	Cucurbita pepo (Zucchini)	cpewmB189
Cla002335	Cucurbita pepo (Zucchini)	cpewmB718