CsGy5G004930 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGAATCACGTAACCCTCAGTACTCCAAATCCCAACAGTTCTCCTCCGGTAACCCTCAATACTCCAAATTCCAACAGTTCTCCTCCGATCAACTCCCCCGCTCTCACAAAGTCGTCAAGGCCGCCACTGCAGTCACTACCGGCACATCGTTCCTCGTCCTCTCCGCCCTAATAATGGCCGGTACAGTAATTGGTCTGGCCGTTGTTACCCCATTGTTTGTCATATTCAGCCCGGTTCTTGTGCCTGCACTGATAACGGCCACGCTTTTGATCTTGGGGTTCTTGGCCTCTGGTGGATTTGGAGCTGCGGCTATCGTTGTGTTGTTGTGGTTTTTCAGGTATATGGGTAGTAATGGGAGAAATCGTAGTGGAGATTGGCCGGAAAAAAGTCGGTTCAAGTTCAACGGCAAGGGGAGAGTGGAAGGCTAA ATGGCGGAATCACGTAACCCTCAGTACTCCAAATCCCAACAGTTCTCCTCCGGTAACCCTCAATACTCCAAATTCCAACAGTTCTCCTCCGATCAACTCCCCCGCTCTCACAAAGTCGTCAAGGCCGCCACTGCAGTCACTACCGGCACATCGTTCCTCGTCCTCTCCGCCCTAATAATGGCCGGTACAGTAATTGGTCTGGCCGTTGTTACCCCATTGTTTGTCATATTCAGCCCGGTTCTTGTGCCTGCACTGATAACGGCCACGCTTTTGATCTTGGGGTTCTTGGCCTCTGGTGGATTTGGAGCTGCGGCTATCGTTGTGTTGTTGTATATGGGTAGTAATGGGAGAAATCGTAGTGGAGATTGGCCGGAAAAAAGTCGGTTCAAGTTCAACGGCAAGGGGAGAGTGGAAGGCTAA ATGGCGGAATCACGTAACCCTCAGTACTCCAAATCCCAACAGTTCTCCTCCGGTAACCCTCAATACTCCAAATTCCAACAGTTCTCCTCCGATCAACTCCCCCGCTCTCACAAAGTCGTCAAGGCCGCCACTGCAGTCACTACCGGCACATCGTTCCTCGTCCTCTCCGCCCTAATAATGGCCGGTACAGTAATTGGTCTGGCCGTTGTTACCCCATTGTTTGTCATATTCAGCCCGGTTCTTGTGCCTGCACTGATAACGGCCACGCTTTTGATCTTGGGGTTCTTGGCCTCTGGTGGATTTGGAGCTGCGGCTATCGTTGTGTTGTTGTATATGGGTAGTAATGGGAGAAATCGTAGTGGAGATTGGCCGGAAAAAAGTCGGTTCAAGTTCAACGGCAAGGGGAGAGTGGAAGGCTAA MAESRNPQYSKSQQFSSGNPQYSKFQQFSSDQLPRSHKVVKAATAVTTGTSFLVLSALIMAGTVIGLAVVTPLFVIFSPVLVPALITATLLILGFLASGGFGAAAIVVLLYMGSNGRNRSGDWPEKSRFKFNGKGRVEG
BLAST of CsGy5G004930 vs. NCBI nr
Match: XP_011654853.1 (PREDICTED: oleosin 1-like [Cucumis sativus] >KGN50321.1 Oleosin-like protein [Cucumis sativus]) HSP 1 Score: 194.5 bits (493), Expect = 2.4e-46 Identity = 131/143 (91.61%), Postives = 132/143 (92.31%), Query Frame = 0
BLAST of CsGy5G004930 vs. NCBI nr
Match: XP_008436973.1 (PREDICTED: oleosin 1-like [Cucumis melo]) HSP 1 Score: 171.0 bits (432), Expect = 2.8e-39 Identity = 104/143 (72.73%), Postives = 111/143 (77.62%), Query Frame = 0
BLAST of CsGy5G004930 vs. NCBI nr
Match: XP_023533015.1 (oleosin 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 109.0 bits (271), Expect = 1.3e-20 Identity = 74/139 (53.24%), Postives = 84/139 (60.43%), Query Frame = 0
BLAST of CsGy5G004930 vs. NCBI nr
Match: ABQ57397.1 (oleosin L-isoform [Ficus pumila var. awkeotsang]) HSP 1 Score: 104.4 bits (259), Expect = 3.2e-19 Identity = 67/106 (63.21%), Postives = 80/106 (75.47%), Query Frame = 0
BLAST of CsGy5G004930 vs. NCBI nr
Match: XP_021905731.1 (oleosin 1-like [Carica papaya]) HSP 1 Score: 104.0 bits (258), Expect = 4.2e-19 Identity = 68/106 (64.15%), Postives = 77/106 (72.64%), Query Frame = 0
BLAST of CsGy5G004930 vs. TAIR10
Match: AT5G51210.1 (oleosin3) HSP 1 Score: 89.7 bits (221), Expect = 1.5e-18 Identity = 55/101 (54.46%), Postives = 68/101 (67.33%), Query Frame = 0
BLAST of CsGy5G004930 vs. TAIR10
Match: AT4G25140.1 (oleosin 1) HSP 1 Score: 87.8 bits (216), Expect = 5.7e-18 Identity = 58/105 (55.24%), Postives = 71/105 (67.62%), Query Frame = 0
BLAST of CsGy5G004930 vs. TAIR10
Match: AT2G25890.1 (Oleosin family protein) HSP 1 Score: 72.4 bits (176), Expect = 2.5e-13 Identity = 52/109 (47.71%), Postives = 67/109 (61.47%), Query Frame = 0
BLAST of CsGy5G004930 vs. TAIR10
Match: AT5G07550.1 (glycine-rich protein 19) HSP 1 Score: 56.2 bits (134), Expect = 1.8e-08 Identity = 36/83 (43.37%), Postives = 50/83 (60.24%), Query Frame = 0
BLAST of CsGy5G004930 vs. TAIR10
Match: AT5G40420.1 (oleosin 2) HSP 1 Score: 55.1 bits (131), Expect = 4.1e-08 Identity = 38/96 (39.58%), Postives = 56/96 (58.33%), Query Frame = 0
BLAST of CsGy5G004930 vs. Swiss-Prot
Match: sp|Q43284|OLEO3_ARATH (Oleosin 14.9 kDa OS=Arabidopsis thaliana OX=3702 GN=OL3 PE=2 SV=2) HSP 1 Score: 89.7 bits (221), Expect = 2.7e-17 Identity = 55/101 (54.46%), Postives = 68/101 (67.33%), Query Frame = 0
BLAST of CsGy5G004930 vs. Swiss-Prot
Match: sp|P29525|OLEO1_ARATH (Oleosin 18.5 kDa OS=Arabidopsis thaliana OX=3702 GN=At4g25140 PE=2 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.0e-16 Identity = 58/105 (55.24%), Postives = 71/105 (67.62%), Query Frame = 0
BLAST of CsGy5G004930 vs. Swiss-Prot
Match: sp|P29111|OLEO2_BRANA (Major oleosin NAP-II (Fragment) OS=Brassica napus OX=3708 PE=1 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.0e-16 Identity = 58/102 (56.86%), Postives = 69/102 (67.65%), Query Frame = 0
BLAST of CsGy5G004930 vs. Swiss-Prot
Match: sp|P29110|OLEO3_BRANA (Oleosin Bn-III OS=Brassica napus OX=3708 PE=2 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 8.7e-16 Identity = 56/104 (53.85%), Postives = 69/104 (66.35%), Query Frame = 0
BLAST of CsGy5G004930 vs. Swiss-Prot
Match: sp|P29109|OLEO5_BRANA (Oleosin Bn-V (Fragment) OS=Brassica napus OX=3708 PE=2 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.5e-15 Identity = 56/105 (53.33%), Postives = 69/105 (65.71%), Query Frame = 0
BLAST of CsGy5G004930 vs. TrEMBL
Match: tr|A0A0A0KRH1|A0A0A0KRH1_CUCSA (Oleosin-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G167130 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 1.6e-46 Identity = 131/143 (91.61%), Postives = 132/143 (92.31%), Query Frame = 0
BLAST of CsGy5G004930 vs. TrEMBL
Match: tr|A0A1S3ASX2|A0A1S3ASX2_CUCME (oleosin 1-like OS=Cucumis melo OX=3656 GN=LOC103482543 PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 1.9e-39 Identity = 104/143 (72.73%), Postives = 111/143 (77.62%), Query Frame = 0
BLAST of CsGy5G004930 vs. TrEMBL
Match: tr|A5JVA7|A5JVA7_FICPW (Oleosin OS=Ficus pumila var. awkeotsang OX=204231 PE=2 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 2.1e-19 Identity = 67/106 (63.21%), Postives = 80/106 (75.47%), Query Frame = 0
BLAST of CsGy5G004930 vs. TrEMBL
Match: tr|Q39629|Q39629_CITSI (Oleosin-like protein OS=Citrus sinensis OX=2711 GN=c3 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.4e-18 Identity = 66/106 (62.26%), Postives = 76/106 (71.70%), Query Frame = 0
BLAST of CsGy5G004930 vs. TrEMBL
Match: tr|G8H6H9|G8H6H9_9ROSI (Oleosin OS=Juglans regia OX=51240 GN=LOC109018558 PE=2 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 2.4e-18 Identity = 65/106 (61.32%), Postives = 76/106 (71.70%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|