Carg08490 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08490
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Oleosin-like protein
Location	Cucurbita_argyrosperma_scaffold_022 : 613171 .. 613563 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAATCTCGTAATTCTCAGCTCTACAAAGCCCGACAGACCTCGAATGAATTACCCCGCTCCCACAAAGTCGTCAAGGCCATTACCGCAGCCACAACTGGCGGCTCCCTCCTCGCCCTCTCCGGCCTCACAATGACTGGTACAGTCATTGCTCTAGCCATCGCCACACCGCTGTTTGTCATATTCAGTCCAGTTCTCGTCCCGGCGGCGATCACTGTCTCACTTTTGATCATGGGGTTCTTGATATCAGGTGGATTTGGCATCGCTGCGGCGGTTGTTTTGTGGTGGTTTTTCAGGTACGTGGCTGGGAGAAGGCAAGATGCTAACAATGATTTGCCCGGAAAAAAATCGTATAAGTTTGGCGGTAAGGGGATACAAGTTGAAGGTTGA

mRNA sequence

ATGGCGGAATCTCGTAATTCTCAGCTCTACAAAGCCCGACAGACCTCGAATGAATTACCCCGCTCCCACAAAGTCGTCAAGGCCATTACCGCAGCCACAACTGGCGGCTCCCTCCTCGCCCTCTCCGGCCTCACAATGACTGGTACAGTCATTGCTCTAGCCATCGCCACACCGCTGTTTGTCATATTCAGTCCAGTTCTCGTCCCGGCGGCGATCACTGTCTCACTTTTGATCATGGGGTTCTTGATATCAGGTGGATTTGGCATCGCTGCGGCGGTTGTTTTGTGGTGGTTTTTCAGGTACGTGGCTGGGAGAAGGCAAGATGCTAACAATGATTTGCCCGGAAAAAAATCGTATAAGTTTGGCGGTAAGGGGATACAAGTTGAAGGTTGA

Coding sequence (CDS)

ATGGCGGAATCTCGTAATTCTCAGCTCTACAAAGCCCGACAGACCTCGAATGAATTACCCCGCTCCCACAAAGTCGTCAAGGCCATTACCGCAGCCACAACTGGCGGCTCCCTCCTCGCCCTCTCCGGCCTCACAATGACTGGTACAGTCATTGCTCTAGCCATCGCCACACCGCTGTTTGTCATATTCAGTCCAGTTCTCGTCCCGGCGGCGATCACTGTCTCACTTTTGATCATGGGGTTCTTGATATCAGGTGGATTTGGCATCGCTGCGGCGGTTGTTTTGTGGTGGTTTTTCAGGTACGTGGCTGGGAGAAGGCAAGATGCTAACAATGATTTGCCCGGAAAAAAATCGTATAAGTTTGGCGGTAAGGGGATACAAGTTGAAGGTTGA

Protein sequence

MAESRNSQLYKARQTSNELPRSHKVVKAITAATTGGSLLALSGLTMTGTVIALAIATPLFVIFSPVLVPAAITVSLLIMGFLISGGFGIAAAVVLWWFFRYVAGRRQDANNDLPGKKSYKFGGKGIQVEG

Homology

[Close]

BLAST of Carg08490 vs. NCBI nr
Match: XP_023533015.1 (oleosin 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 195.3 bits (495), Expect = 1.3e-46
Identity = 109/129 (84.50%), Postives = 116/129 (89.92%), Query Frame = 0


Query: 1   MAESRNSQLYKARQTSNELPRSHKVVKAITAATTGGSLLALSGLTMTGTVIALAIATPLF 60
           MAESRNSQ YK+RQTS+ELPRSHK+VKAITAATTGGSLLALS LTMTG   ALAIATPLF
Sbjct: 1   MAESRNSQHYKSRQTSDELPRSHKIVKAITAATTGGSLLALSALTMTGXXXALAIATPLF 60

Query: 61  VIFSPVLVPAAITVSLLIMGFLISGGFGIAAAXXXXXXFRYVAGRRQDANNDLPGKKSYK 120
           VIFSPVLVPAAITVSLLIMGFLISGGFGIAAA      FRYV G+RQDA+NDLPGKKSYK
Sbjct: 61  VIFSPVLVPAAITVSLLIMGFLISGGFGIAAAVVTWWFFRYVTGKRQDADNDLPGKKSYK 120

Query: 121 FGGKGIQVE 130
           FG KGI+V+
Sbjct: 121 FGSKGIEVQ 129

[Close]

BLAST of Carg08490 vs. NCBI nr
Match: XP_008436973.1 (PREDICTED: oleosin 1-like [Cucumis melo])

HSP 1 Score: 124.8 bits (312), Expect = 2.2e-25
Identity = 78/131 (59.54%), Postives = 91/131 (69.47%), Query Frame = 0


Query: 1   MAESRNSQLYKARQ-TSNELPRSHKVVKAITAATTGGSLLALSGLTMTGTVIALAIATPL 60
           MAE RN Q  K++  +S++LPRSHKVVKA TA TTG S L LSGL MTGTVI LA+ TPL
Sbjct: 1   MAELRNPQYSKSQHFSSDQLPRSHKVVKAATAVTTGTSFLFLSGLLMTGTVIGLAVVTPL 60

Query: 61  FVIFSPVLVPAAITVSLLIMGFLISGGFGIAAAXXXXXXFRYVAGRRQDANNDLPGKKSY 120
            VIFSPVLVPA IT SLL +GFL SGGFG AA       FRY+    ++    LP K  +
Sbjct: 61  LVIFSPVLVPAVITASLLFLGFLASGGFGAAAVVVSMWIFRYMGNNGRNRRGYLPEKSRF 120

Query: 121 KFGGKGIQVEG 131
           KF GKG +V+G
Sbjct: 121 KFAGKG-RVDG 130

[Close]

BLAST of Carg08490 vs. NCBI nr
Match: XP_011654853.1 (PREDICTED: oleosin 1-like [Cucumis sativus] >KGN50321.1 Oleosin-like protein [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 3.5e-23
Identity = 70/112 (62.50%), Postives = 79/112 (70.54%), Query Frame = 0


Query: 19  LPRSHKVVKAITAATTGGSLLALSGLTMTGTVIALAIATPLFVIFSPVLVPAAITVSLLI 78
           LPRSHKVVKA TA TTG S L LS L M GTVI LA+ TPLFVIFSPVLVPA IT +LLI
Sbjct: 93  LPRSHKVVKAATAVTTGTSFLVLSALIMAGTVIGLAVVTPLFVIFSPVLVPALITATLLI 152

Query: 79  MGFLISGGFGIAAAXXXXXXFRYVAGRRQDANNDLPGKKSYKFGGKGIQVEG 131
           +GFL SGGFG AA       FRY+    ++ + D P K  +KF GKG +VEG
Sbjct: 153 LGFLASGGFGAAAIVVLLWFFRYMGNNGRNRSGDWPEKSRFKFNGKG-RVEG 203

[Close]

BLAST of Carg08490 vs. NCBI nr
Match: XP_018856265.1 (PREDICTED: oleosin 1-like [Juglans regia] >XP_018810443.1 PREDICTED: oleosin 1-like [Juglans regia] >AET74077.1 oleosin [Juglans regia])

HSP 1 Score: 112.5 bits (280), Expect = 1.1e-21
Identity = 62/87 (71.26%), Postives = 72/87 (82.76%), Query Frame = 0


Query: 20  PRSHKVVKAITAATTGGSLLALSGLTMTGTVIALAIATPLFVIFSPVLVPAAITVSLLIM 79
           PRSH+VVKA TAAT GGSLL LSGL +TGTVI+L +ATPLFVIFSPVLVPA ITV+L+I+
Sbjct: 15  PRSHQVVKAATAATAGGSLLVLSGLILTGTVISLTVATPLFVIFSPVLVPAVITVALIIL 74

Query: 80  GFLISGGFGIAAAXXXXXXFRYVAGRR 107
           GFL SGGFG+AA       +RYV GR+
Sbjct: 75  GFLASGGFGVAAVTVLSWIYRYVTGRQ 101

[Close]

BLAST of Carg08490 vs. NCBI nr
Match: AAO65960.1 (oleosin [Corylus avellana])

HSP 1 Score: 111.3 bits (277), Expect = 2.5e-21
Identity = 64/94 (68.09%), Postives = 71/94 (75.53%), Query Frame = 0


Query: 20  PRSHKVVKAITAATTGGSLLALSGLTMTGTVIALAIATPLFVIFSPVLVPAAITVSLLIM 79
           PRSH+VVKA TAAT GGSLL  SGL + GTVIAL +ATPLFVIFSPVLVPA ITVSL+IM
Sbjct: 15  PRSHQVVKAATAATAGGSLLVPSGLILAGTVIALTLATPLFVIFSPVLVPAVITVSLIIM 74

Query: 80  GFLISGGFGIAAAXXXXXXFRYVAGRRQDANNDL 114
           GFL SGGFG+AA       +RYV GR     + L
Sbjct: 75  GFLASGGFGVAAVTVLSWIYRYVTGRHPPGADQL 108

[Close]

BLAST of Carg08490 vs. TAIR10
Match: AT5G51210.1 (oleosin3)

HSP 1 Score: 97.8 bits (242), Expect = 5.1e-21
Identity = 56/94 (59.57%), Postives = 68/94 (72.34%), Query Frame = 0


Query: 15  TSNELPRSHKVVKAITAATTGGSLLALSGLTMTGTVIALAIATPLFVIFSPVLVPAAITV 74
           T    P++ ++VKA TA T GGSLL LSGLT+ GTVIAL +ATPL VIFSPVLVPA +TV
Sbjct: 17  TQEAHPKARQMVKAATAVTAGGSLLVLSGLTLAGTVIALTVATPLLVIFSPVLVPAVVTV 76

Query: 75  SLLIMGFLISGGFGIAAAXXXXXXFRYVAGRRQD 109
           +L+I GFL SGGFGIAA       +R++ G   D
Sbjct: 77  ALIITGFLASGGFGIAAITAFSWLYRHMTGSGSD 110

[Close]

BLAST of Carg08490 vs. TAIR10
Match: AT4G25140.1 (oleosin 1)

HSP 1 Score: 94.4 bits (233), Expect = 5.7e-20
Identity = 57/104 (54.81%), Postives = 69/104 (66.35%), Query Frame = 0


Query: 21  RSHKVVKAITAATTGGSLLALSGLTMTGTVIALAIATPLFVIFSPVLVPAAITVSLLIMG 80
           +S ++ KA TA T GGSLL LS LT+ GTVIAL +ATPL VIFSP+LVPA ITV+LLI G
Sbjct: 39  KSRQIAKAATAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVALLITG 98

Query: 81  FLISGGFGIAAAXXXXXXFRYVAGRRQDANNDLPGKKSYKFGGK 125
           FL SGGFGIAA       ++Y  G     ++ L   +  K G K
Sbjct: 99  FLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSAR-MKLGSK 141

[Close]

BLAST of Carg08490 vs. TAIR10
Match: AT2G25890.1 (Oleosin family protein)

HSP 1 Score: 92.8 bits (229), Expect = 1.7e-19
Identity = 53/93 (56.99%), Postives = 66/93 (70.97%), Query Frame = 0


Query: 13  RQTSNELPRSHKVVKAITAATTGGSLLALSGLTMTGTVIALAIATPLFVIFSPVLVPAAI 72
           R      P + ++V+ +TAAT G SLL LSGLT+TGTVI L +ATPL V+FSPVLVPA I
Sbjct: 16  RSLHESSPSTRQIVRFVTAATIGLSLLVLSGLTLTGTVIGLIVATPLMVLFSPVLVPAVI 75

Query: 73  TVSLLIMGFLISGGFGIAAAXXXXXXFRYVAGR 106
           T+ LL MGFL SGG G+AAA      ++YV G+
Sbjct: 76  TIGLLTMGFLFSGGCGVAAATALTWIYKYVTGK 108

[Close]

BLAST of Carg08490 vs. TAIR10
Match: AT5G40420.1 (oleosin 2)

HSP 1 Score: 67.4 bits (163), Expect = 7.4e-12
Identity = 40/94 (42.55%), Postives = 56/94 (59.57%), Query Frame = 0


Query: 20  PRSHKVVKAITAATTGGSLLALSGLTMTGTVIALAIATPLFVIFSPVLVPAAITVSLLIM 79
           P S +V+  +      GSLLAL+GL + G+VI L +A PLF++FSPV+VPAA+T+ L + 
Sbjct: 49  PSSTQVLSLLIGVPVVGSLLALAGLLLAGSVIGLMVALPLFLLFSPVIVPAALTIGLAMT 108

Query: 80  GFLISGGFGIAAAXXXXXXFRYVAGRRQDANNDL 114
           GFL SG FG+           Y+ G R+     L
Sbjct: 109 GFLASGMFGLTGLSSISWVMNYLRGTRRTVPEQL 142

[Close]

BLAST of Carg08490 vs. TAIR10
Match: AT3G27660.1 (oleosin 4)

HSP 1 Score: 64.7 bits (156), Expect = 4.8e-11
Identity = 35/85 (41.18%), Postives = 54/85 (63.53%), Query Frame = 0


Query: 20  PRSHKVVKAITAATTGGSLLALSGLTMTGTVIALAIATPLFVIFSPVLVPAAITVSLLIM 79
           P +++++  I     GG+LL L+GLT+ G+VI L ++ PLF++FSPV+VPAA+T+ L + 
Sbjct: 47  PSTNQILALIAGVPIGGTLLTLAGLTLAGSVIGLLVSIPLFLLFSPVIVPAALTIGLAVT 106

Query: 80  GFLISGGFGIAAAXXXXXXFRYVAG 105
           G L SG FG+           Y+ G
Sbjct: 107 GILASGLFGLTGLSSVSWVLNYLRG 131

[Close]

BLAST of Carg08490 vs. Swiss-Prot
Match: sp|Q43284|OLEO3_ARATH (Oleosin 14.9 kDa OS=Arabidopsis thaliana OX=3702 GN=OL3 PE=2 SV=2)

HSP 1 Score: 97.8 bits (242), Expect = 9.3e-20
Identity = 56/94 (59.57%), Postives = 68/94 (72.34%), Query Frame = 0


Query: 15  TSNELPRSHKVVKAITAATTGGSLLALSGLTMTGTVIALAIATPLFVIFSPVLVPAAITV 74
           T    P++ ++VKA TA T GGSLL LSGLT+ GTVIAL +ATPL VIFSPVLVPA +TV
Sbjct: 17  TQEAHPKARQMVKAATAVTAGGSLLVLSGLTLAGTVIALTVATPLLVIFSPVLVPAVVTV 76

Query: 75  SLLIMGFLISGGFGIAAAXXXXXXFRYVAGRRQD 109
           +L+I GFL SGGFGIAA       +R++ G   D
Sbjct: 77  ALIITGFLASGGFGIAAITAFSWLYRHMTGSGSD 110

[Close]

BLAST of Carg08490 vs. Swiss-Prot
Match: sp|P29111|OLEO2_BRANA (Major oleosin NAP-II (Fragment) OS=Brassica napus OX=3708 PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.2e-19
Identity = 58/103 (56.31%), Postives = 70/103 (67.96%), Query Frame = 0


Query: 22  SHKVVKAITAATTGGSLLALSGLTMTGTVIALAIATPLFVIFSPVLVPAAITVSLLIMGF 81
           S ++ KA+TA T GGSLL LS LT+ GTVIAL +ATPL VIFSP+LVPA ITV+LLI GF
Sbjct: 42  SRQIAKAVTAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVALLITGF 101

Query: 82  LISGGFGIAAAXXXXXXFRYVAGRRQDANNDLPGKKSYKFGGK 125
           L SGGFGIAA       ++Y  G     ++ L   +  K GGK
Sbjct: 102 LSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSAR-MKLGGK 143

[Close]

BLAST of Carg08490 vs. Swiss-Prot
Match: sp|P29525|OLEO1_ARATH (Oleosin 18.5 kDa OS=Arabidopsis thaliana OX=3702 GN=At4g25140 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.0e-18
Identity = 57/104 (54.81%), Postives = 69/104 (66.35%), Query Frame = 0


Query: 21  RSHKVVKAITAATTGGSLLALSGLTMTGTVIALAIATPLFVIFSPVLVPAAITVSLLIMG 80
           +S ++ KA TA T GGSLL LS LT+ GTVIAL +ATPL VIFSP+LVPA ITV+LLI G
Sbjct: 39  KSRQIAKAATAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVALLITG 98

Query: 81  FLISGGFGIAAAXXXXXXFRYVAGRRQDANNDLPGKKSYKFGGK 125
           FL SGGFGIAA       ++Y  G     ++ L   +  K G K
Sbjct: 99  FLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSAR-MKLGSK 141

[Close]

BLAST of Carg08490 vs. Swiss-Prot
Match: sp|P29110|OLEO3_BRANA (Oleosin Bn-III OS=Brassica napus OX=3708 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.0e-18
Identity = 56/103 (54.37%), Postives = 69/103 (66.99%), Query Frame = 0


Query: 22  SHKVVKAITAATTGGSLLALSGLTMTGTVIALAIATPLFVIFSPVLVPAAITVSLLIMGF 81
           S ++ KA+TA T GGSLL LS LT+ GTVIAL +ATPL VIFSP+LVPA ITV++LI GF
Sbjct: 54  SRQIAKAVTAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVAMLITGF 113

Query: 82  LISGGFGIAAAXXXXXXFRYVAGRRQDANNDLPGKKSYKFGGK 125
           L SGGFGIAA       ++Y  G     ++ L   +  K G K
Sbjct: 114 LSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSAR-MKLGSK 155

[Close]

BLAST of Carg08490 vs. Swiss-Prot
Match: sp|P29109|OLEO5_BRANA (Oleosin Bn-V (Fragment) OS=Brassica napus OX=3708 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.3e-17
Identity = 55/104 (52.88%), Postives = 67/104 (64.42%), Query Frame = 0


Query: 21  RSHKVVKAITAATTGGSLLALSGLTMTGTVIALAIATPLFVIFSPVLVPAAITVSLLIMG 80
           +S ++ KA TA T G SLL LS LT+ GTVIAL +ATPL VIFSP+LVPA ITV+LLI G
Sbjct: 41  KSRQIAKATTAVTAGDSLLVLSSLTLVGTVIALIVATPLLVIFSPILVPALITVALLITG 100

Query: 81  FLISGGFGIAAAXXXXXXFRYVAGRRQDANNDLPGKKSYKFGGK 125
           FL SG FGIAA       ++Y  G     ++ L   +  K G K
Sbjct: 101 FLSSGAFGIAAITVFSWIYKYATGEHPQGSDKLDSAR-MKLGSK 143

[Close]

BLAST of Carg08490 vs. TrEMBL
Match: tr|A0A1S3ASX2|A0A1S3ASX2_CUCME (oleosin 1-like OS=Cucumis melo OX=3656 GN=LOC103482543 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.4e-25
Identity = 78/131 (59.54%), Postives = 91/131 (69.47%), Query Frame = 0


Query: 1   MAESRNSQLYKARQ-TSNELPRSHKVVKAITAATTGGSLLALSGLTMTGTVIALAIATPL 60
           MAE RN Q  K++  +S++LPRSHKVVKA TA TTG S L LSGL MTGTVI LA+ TPL
Sbjct: 1   MAELRNPQYSKSQHFSSDQLPRSHKVVKAATAVTTGTSFLFLSGLLMTGTVIGLAVVTPL 60

Query: 61  FVIFSPVLVPAAITVSLLIMGFLISGGFGIAAAXXXXXXFRYVAGRRQDANNDLPGKKSY 120
            VIFSPVLVPA IT SLL +GFL SGGFG AA       FRY+    ++    LP K  +
Sbjct: 61  LVIFSPVLVPAVITASLLFLGFLASGGFGAAAVVVSMWIFRYMGNNGRNRRGYLPEKSRF 120

Query: 121 KFGGKGIQVEG 131
           KF GKG +V+G
Sbjct: 121 KFAGKG-RVDG 130

[Close]

BLAST of Carg08490 vs. TrEMBL
Match: tr|A0A0A0KRH1|A0A0A0KRH1_CUCSA (Oleosin-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G167130 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.3e-23
Identity = 70/112 (62.50%), Postives = 79/112 (70.54%), Query Frame = 0


Query: 19  LPRSHKVVKAITAATTGGSLLALSGLTMTGTVIALAIATPLFVIFSPVLVPAAITVSLLI 78
           LPRSHKVVKA TA TTG S L LS L M GTVI LA+ TPLFVIFSPVLVPA IT +LLI
Sbjct: 93  LPRSHKVVKAATAVTTGTSFLVLSALIMAGTVIGLAVVTPLFVIFSPVLVPALITATLLI 152

Query: 79  MGFLISGGFGIAAAXXXXXXFRYVAGRRQDANNDLPGKKSYKFGGKGIQVEG 131
           +GFL SGGFG AA       FRY+    ++ + D P K  +KF GKG +VEG
Sbjct: 153 LGFLASGGFGAAAIVVLLWFFRYMGNNGRNRSGDWPEKSRFKFNGKG-RVEG 203

[Close]

BLAST of Carg08490 vs. TrEMBL
Match: tr|G8H6H9|G8H6H9_9ROSI (Oleosin OS=Juglans regia OX=51240 GN=LOC109018558 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 7.4e-22
Identity = 62/87 (71.26%), Postives = 72/87 (82.76%), Query Frame = 0


Query: 20  PRSHKVVKAITAATTGGSLLALSGLTMTGTVIALAIATPLFVIFSPVLVPAAITVSLLIM 79
           PRSH+VVKA TAAT GGSLL LSGL +TGTVI+L +ATPLFVIFSPVLVPA ITV+L+I+
Sbjct: 15  PRSHQVVKAATAATAGGSLLVLSGLILTGTVISLTVATPLFVIFSPVLVPAVITVALIIL 74

Query: 80  GFLISGGFGIAAAXXXXXXFRYVAGRR 107
           GFL SGGFG+AA       +RYV GR+
Sbjct: 75  GFLASGGFGVAAVTVLSWIYRYVTGRQ 101

[Close]

BLAST of Carg08490 vs. TrEMBL
Match: tr|Q84T91|Q84T91_CORAV (Oleosin OS=Corylus avellana OX=13451 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.6e-21
Identity = 64/94 (68.09%), Postives = 71/94 (75.53%), Query Frame = 0


Query: 20  PRSHKVVKAITAATTGGSLLALSGLTMTGTVIALAIATPLFVIFSPVLVPAAITVSLLIM 79
           PRSH+VVKA TAAT GGSLL  SGL + GTVIAL +ATPLFVIFSPVLVPA ITVSL+IM
Sbjct: 15  PRSHQVVKAATAATAGGSLLVPSGLILAGTVIALTLATPLFVIFSPVLVPAVITVSLIIM 74

Query: 80  GFLISGGFGIAAAXXXXXXFRYVAGRRQDANNDL 114
           GFL SGGFG+AA       +RYV GR     + L
Sbjct: 75  GFLASGGFGVAAVTVLSWIYRYVTGRHPPGADQL 108

[Close]

BLAST of Carg08490 vs. TrEMBL
Match: tr|V4S392|V4S392_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10006168mg PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.6e-21
Identity = 66/97 (68.04%), Postives = 72/97 (74.23%), Query Frame = 0


Query: 8   QLYKARQTSNELPRSHKVVKAITAATTGGSLLALSGLTMTGTVIALAIATPLFVIFSPVL 67
           Q ++  Q  +  PRSH+VVKA TA T GGSLL LSGLTM GTVIAL IATPL VI SPVL
Sbjct: 6   QPHEQTQLQSRQPRSHQVVKAATAVTAGGSLLVLSGLTMAGTVIALTIATPLLVICSPVL 65

Query: 68  VPAAITVSLLIMGFLISGGFGIAAAXXXXXXFRYVAG 105
           VPA ITVSLLIMGFL SGGFG+AA       +RYV G
Sbjct: 66  VPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTG 102

The following BLAST results are available for this feature:

BLAST of Carg08490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023533015.1	1.3e-46	84.50	oleosin 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_008436973.1	2.2e-25	59.54	PREDICTED: oleosin 1-like [Cucumis melo]	[more]
XP_011654853.1	3.5e-23	62.50	PREDICTED: oleosin 1-like [Cucumis sativus] >KGN50321.1 Oleosin-like protein [Cu...	[more]
XP_018856265.1	1.1e-21	71.26	PREDICTED: oleosin 1-like [Juglans regia] >XP_018810443.1 PREDICTED: oleosin 1-l...	[more]
AAO65960.1	2.5e-21	68.09	oleosin [Corylus avellana]	[more]

BLAST of Carg08490 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G51210.1	5.1e-21	59.57	oleosin3	[more]
AT4G25140.1	5.7e-20	54.81	oleosin 1	[more]
AT2G25890.1	1.7e-19	56.99	Oleosin family protein	[more]
AT5G40420.1	7.4e-12	42.55	oleosin 2	[more]
AT3G27660.1	4.8e-11	41.18	oleosin 4	[more]

BLAST of Carg08490 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q43284\|OLEO3_ARATH	9.3e-20	59.57	Oleosin 14.9 kDa OS=Arabidopsis thaliana OX=3702 GN=OL3 PE=2 SV=2	[more]
sp\|P29111\|OLEO2_BRANA	1.2e-19	56.31	Major oleosin NAP-II (Fragment) OS=Brassica napus OX=3708 PE=1 SV=1	[more]
sp\|P29525\|OLEO1_ARATH	1.0e-18	54.81	Oleosin 18.5 kDa OS=Arabidopsis thaliana OX=3702 GN=At4g25140 PE=2 SV=1	[more]
sp\|P29110\|OLEO3_BRANA	1.0e-18	54.37	Oleosin Bn-III OS=Brassica napus OX=3708 PE=2 SV=1	[more]
sp\|P29109\|OLEO5_BRANA	4.3e-17	52.88	Oleosin Bn-V (Fragment) OS=Brassica napus OX=3708 PE=2 SV=1	[more]

BLAST of Carg08490 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3ASX2\|A0A1S3ASX2_CUCME	1.4e-25	59.54	oleosin 1-like OS=Cucumis melo OX=3656 GN=LOC103482543 PE=4 SV=1	[more]
tr\|A0A0A0KRH1\|A0A0A0KRH1_CUCSA	2.3e-23	62.50	Oleosin-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G167130 PE=4 SV=1	[more]
tr\|G8H6H9\|G8H6H9_9ROSI	7.4e-22	71.26	Oleosin OS=Juglans regia OX=51240 GN=LOC109018558 PE=2 SV=1	[more]
tr\|Q84T91\|Q84T91_CORAV	1.6e-21	68.09	Oleosin OS=Corylus avellana OX=13451 PE=2 SV=1	[more]
tr\|V4S392\|V4S392_9ROSI	3.6e-21	68.04	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10006168mg PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0012511	monolayer-surrounded lipid storage body
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR000136	Oleosin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0012511	monolayer-surrounded lipid storage body
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08490-RA	Carg08490-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000136	Oleosin	PFAM	PF01277	Oleosin	coord: 24..112 e-value: 1.1E-34 score: 118.5
IPR000136	Oleosin	PANTHER	PTHR33203	FAMILY NOT NAMED	coord: 2..119
IPR000136	Oleosin	PROSITE	PS00811	OLEOSINS	coord: 48..70

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg08490	Cla003617	Watermelon (97103) v1	carwmB0710
Carg08490	Cla010710	Watermelon (97103) v1	carwmB0707
Carg08490	Csa5G167130	Cucumber (Chinese Long) v2	carcuB0733
Carg08490	MELO3C017642	Melon (DHL92) v3.5.1	carmeB0710
Carg08490	MELO3C005464	Melon (DHL92) v3.5.1	carmeB0705
Carg08490	ClCG07G017010	Watermelon (Charleston Gray)	carwcgB0691
Carg08490	ClCG01G004720	Watermelon (Charleston Gray)	carwcgB0688
Carg08490	CSPI04G04170	Wild cucumber (PI 183967)	carcpiB0746
Carg08490	CSPI05G07470	Wild cucumber (PI 183967)	carcpiB0749
Carg08490	Cucsa.129310	Cucumber (Gy14) v1	carcgyB0796
Carg08490	Cucsa.094080	Cucumber (Gy14) v1	carcgyB0793
Carg08490	CmaCh16G002200	Cucurbita maxima (Rimu)	carcmaB0995
Carg08490	CmoCh16G002380	Cucurbita moschata (Rifu)	carcmoB0967
Carg08490	CmoCh04G003810	Cucurbita moschata (Rifu)	carcmoB0972
Carg08490	Lsi09G004910	Bottle gourd (USVL1VR-Ls)	carlsiB648
Carg08490	Lsi07G001190	Bottle gourd (USVL1VR-Ls)	carlsiB653
Carg08490	Cp4.1LG01g03480	Cucurbita pepo (Zucchini)	carcpeB1001
Carg08490	Cp4.1LG05g07320	Cucurbita pepo (Zucchini)	carcpeB1002
Carg08490	CsGy4G004080	Cucumber (Gy14) v2	carcgybB0708
Carg08490	CsGy5G004930	Cucumber (Gy14) v2	carcgybB0711
Carg08490	MELO3C017642.2	Melon (DHL92) v3.6.1	carmedB0723
Carg08490	MELO3C005464.2	Melon (DHL92) v3.6.1	carmedB0718
Carg08490	CsaV3_5G004910	Cucumber (Chinese Long) v3	carcucB0752
Carg08490	CsaV3_4G004230	Cucumber (Chinese Long) v3	carcucB0749
Carg08490	Cla97C01G004930	Watermelon (97103) v2	carwmbB0741
Carg08490	Cla97C07G144060	Watermelon (97103) v2	carwmbB0744
Carg08490	Bhi01G002003	Wax gourd	carwgoB0837
Carg08490	BhiUN395G16	Wax gourd	carwgoB0839

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg08490	Silver-seed gourd	carcarB586
Carg08490	Cucurbita maxima (Rimu)	carcmaB0993
Carg08490	Cucurbita maxima (Rimu)	carcmaB0999
Carg08490	Cucurbita moschata (Rifu)	carcmoB0965
Carg08490	Cucurbita moschata (Rifu)	carcmoB0971
Carg08490	Cucurbita pepo (Zucchini)	carcpeB0995
Carg08490	Cucurbita pepo (Zucchini)	carcpeB0998
Carg08490	Wax gourd	carwgoB0830