CsGy5G004690 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G004690
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Auxin-responsive protein
Location	Chr5 : 3055871 .. 3058232 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAATGACAAAAAACAAACAAACAAAAAAACGTGAAATGTTAAAAAAGTGCGAGTACATATAATACATTATATATACTAAAAAAATAGTAGTGTCAAATAAAAAGAATTTATTAATAAGAGACTGAAACACAGTTTTACCATTAAACTAACTACTTGTATCGGTATTACTTTACAAGGTCGAGGGTGAGTCTTAATTTGGGACGTTTGCAATTTTTAAATAAGAAGGAAGTGCTCACGGGTATAAAATGGGGCGCGTGCGAAATAAAATACGCGTCCTAATAAATGCTGGCGAACAGAAAAGGCTTCGAGCACACACACAAGATGTCACTAACGAACTCTTACAAATAAGCCAACATTCCAATCCAAATCCCTTTCATCTCTTCATTTTCCAACGCATTTCGCTCCAGTTCTACATCAATCAAGCCATGAAACGCCAACGACTATCTAGTTTCCAAAACCTCCACCATCTCAATTTCGAAGCAACCGAGCTCCGATTAGGATTACCGCAAACAAGCTGTAGAACTGAGCAACAACCAGCAGAGGAACGTAGTTCACATTCACAAATATCCGCCAAGCAGAGCAAGAGCGAAACCAGATCCGGAGGAAGAACCGATTCTAATTCCATTTTGACTTCCACTAATCCTTCTTCAGATAATCATGCCGATCATTGCCATGAACACACCAAGTAAGTCCATCAATTTCAATTTCAATCGTCGCAATCATCACTGTGTTTAGGACATTAGGGCTTATTCATGTTTGTTTGTTGTGGTTGTGGTTGAATTATTGCAGGACGCAAGTGGTTGGATGGCCGCCGGTGAGATCGTACAGGAAGAATGTGATTATTGAAACAGAGGAGAAGAAGAAGAAGAAGGAGATTGTGAATATGGAGTTGGGATTAATGAGTGGAATGTATGTGAAAGTGAGCTTGGATGGAGCTCCATACCTAAGGAAGATTGATCTCAAGCTTTATCAAGGCTATCAACAATTGTTGGATGCTTTGGAAGACATGTTCAACTTCAAAATTGGTAACTAATTCTTTTAAATATATTACTAGAGAACTCATGCTCAGCAATTGTCTAATTCTATTCCACACTTAATTAACTTTCATAGGGTTTGAAAATGGTAAGTGTCAATAGTTCATGTTCAAATAATGAAAATAAAATCAAATTTGAAAAACAAATCAAACATGTGCTAATCAAAAAGTCGTACATTATTAAACAATGAACGACAGTTGCAAATATAACAATTAGATCTAGAGTATGTGCTGATATAGCTCTCGATGTCTATGACAGATAGAATATATTTCAGGTAGAAGTTTATAAGCGTTATTCATAAACTATTATTGTCCCAGAAAGTGTTACCCACTGCAATTACTTTAAAAACAATATAAGTATAGTCAAATCTGTGTGAAACATACATACAACTTTTATCAAAAGATTAAAATTTCGAATATGTCAATAGAGTCGTGGATGGTAGAATGATATAATTGCAATAAGTGTTGCAATTAATATAATTGGTAACAATTACTTTTCTTTTCTCACATTTTGTTTGTGCTTTTACCGTGAAGATTGTGTTTGAGTGGAGAAAAATTGGTATCAAATAAACATGACCATCATGTTACCATCACATTGGGGCTACGAGAACGTGGTCATCTATTGAGATGATGTATAAAAAATAGTTGTGCATTGATAAATAAGCAAAATGTTAGATTTTACATGTTTTTAAACATATGTCATTAATAATCATATAGGAAAAACAAAACAAGGTGTATTGTTGTTTCTTCAACATCATTGTTATTAGATTGTTAACATAAAATTTTGTGGGATTTTGTAGGGAGAAATTCAGAAAGAGAAGATTACAATGGGCGTGATTATGTTCTAACTTATGAAGATAAAGATGGTGATTGGATGATGGTTGGAGATGTTCCATGGAAGTGAGTCTTTCTCTAATTATTATTTTTTCTCTCTTTCTCTCATAATAATCTCTCTCCCAAAAGGCTAAAATTTTATTTTATTTTGATTCCCTCTTGATACAGTATGTTTACTTGTTGCTGCAAGAGAATGAGAATGATGAAAGGATCAGATGCCAGAGGGTTGAGTTGTTTATAATTTTGTATTTTAAGAAGAAAATGACAAAATATTAATAATAATAAAGGTATTTGTTTTAGATAAAATTTATGAGAAATGTATTTTGTAATTCAATTGTCCAGAAAAATAAAAGTATAGCTCAATTTATTTATGAATTTAAAGATGTCATAGTATTGTATTCTTCTGTATAAAAAAAGAAAAACTACTTGGACATGCAACCTACTCAAATCTAACGTCATATTCAAATTTAATTTCATAATATATCAAAATATT

mRNA sequence

AAAAATGACAAAAAACAAACAAACAAAAAAACGTGAAATGTTAAAAAAGTGCGAGTACATATAATACATTATATATACTAAAAAAATAGTAGTGTCAAATAAAAAGAATTTATTAATAAGAGACTGAAACACAGTTTTACCATTAAACTAACTACTTGTATCGGTATTACTTTACAAGGTCGAGGGTGAGTCTTAATTTGGGACGTTTGCAATTTTTAAATAAGAAGGAAGTGCTCACGGGTATAAAATGGGGCGCGTGCGAAATAAAATACGCGTCCTAATAAATGCTGGCGAACAGAAAAGGCTTCGAGCACACACACAAGATGTCACTAACGAACTCTTACAAATAAGCCAACATTCCAATCCAAATCCCTTTCATCTCTTCATTTTCCAACGCATTTCGCTCCAGTTCTACATCAATCAAGCCATGAAACGCCAACGACTATCTAGTTTCCAAAACCTCCACCATCTCAATTTCGAAGCAACCGAGCTCCGATTAGGATTACCGCAAACAAGCTGTAGAACTGAGCAACAACCAGCAGAGGAACGTAGTTCACATTCACAAATATCCGCCAAGCAGAGCAAGAGCGAAACCAGATCCGGAGGAAGAACCGATTCTAATTCCATTTTGACTTCCACTAATCCTTCTTCAGATAATCATGCCGATCATTGCCATGAACACACCAAGACGCAAGTGGTTGGATGGCCGCCGGTGAGATCGTACAGGAAGAATGTGATTATTGAAACAGAGGAGAAGAAGAAGAAGAAGGAGATTGTGAATATGGAGTTGGGATTAATGAGTGGAATGTATGTGAAAGTGAGCTTGGATGGAGCTCCATACCTAAGGAAGATTGATCTCAAGCTTTATCAAGGCTATCAACAATTGTTGGATGCTTTGGAAGACATGTTCAACTTCAAAATTGGTAACTAATTCTTTTAAATATATTACTAGAGAACTCATGCTCAGCAATTGTCTAATTCTATTCCACACTTAATTAACTTTCATAGGGTTTGAAAATGGTAAGTGTCAATAGTTCATGTTCAAATAATGAAAATAAAATCAAATTTGAAAAACAAATCAAACATGTGCTAATCAAAAAGTCGTACATTATTAAACAATGAACGACAGTTGCAAATATAACAATTAGATCTAGAGTATGTGCTGATATAGCTCTCGATGTCTATGACAGATAGAATATATTTCAGGTAGAAGTTTATAAGCGTTATTCATAAACTATTATTGTCCCAGAAAGTGTTACCCACTGCAATTACTTTAAAAACAATATAAGTATAGTCAAATCTGTGTGAAACATACATACAACTTTTATCAAAAGATTAAAATTTCGAATATGTCAATAGAGTCGTGGATGGTAGAATGATATAATTGCAATAAGTGTTGCAATTAATATAATTGGTAACAATTACTTTTCTTTTCTCACATTTTGTTTGTGCTTTTACCGTGAAGATTGTGTTTGAGTGGAGAAAAATTGGTATCAAATAAACATGACCATCATGTTACCATCACATTGGGGCTACGAGAACGTGGTCATCTATTGAGATGATGTATAAAAAATAGTTGTGCATTGATAAATAAGCAAAATGTTAGATTTTACATGTTTTTAAACATATGTCATTAATAATCATATAGGAAAAACAAAACAAGGTGTATTGTTGTTTCTTCAACATCATTGTTATTAGATTGTTAACATAAAATTTTGTGGGATTTTGTAGGGAGAAATTCAGAAAGAGAAGATTACAATGGGCGTGATTATGTTCTAACTTATGAAGATAAAGATGGTGATTGGATGATGGTTGGAGATGTTCCATGGAATATGTTTACTTGTTGCTGCAAGAGAATGAGAATGATGAAAGGATCAGATGCCAGAGGGTTGAGTTGTTTATAATTTTGTATTTTAAGAAGAAAATGACAAAATATTAATAATAATAAAGGTATTTGTTTTAGATAAAATTTATGAGAAATGTATTTTGTAATTCAATTGTCCAGAAAAATAAAAGTATAGCTCAATTTATTTATGAATTTAAAGATGTCATAGTATTGTATTCTTCTGTATAAAAAAAGAAAAACTACTTGGACATGCAACCTACTCAAATCTAACGTCATATTCAAATTTAATTTCATAATATATCAAAATATT

Coding sequence (CDS)

ATGGGGCGCGTGCGAAATAAAATACGCGTCCTAATAAATGCTGGCGAACAGAAAAGGCTTCGAGCACACACACAAGATGTCACTAACGAACTCTTACAAATAAGCCAACATTCCAATCCAAATCCCTTTCATCTCTTCATTTTCCAACGCATTTCGCTCCAGTTCTACATCAATCAAGCCATGAAACGCCAACGACTATCTAGTTTCCAAAACCTCCACCATCTCAATTTCGAAGCAACCGAGCTCCGATTAGGATTACCGCAAACAAGCTGTAGAACTGAGCAACAACCAGCAGAGGAACGTAGTTCACATTCACAAATATCCGCCAAGCAGAGCAAGAGCGAAACCAGATCCGGAGGAAGAACCGATTCTAATTCCATTTTGACTTCCACTAATCCTTCTTCAGATAATCATGCCGATCATTGCCATGAACACACCAAGACGCAAGTGGTTGGATGGCCGCCGGTGAGATCGTACAGGAAGAATGTGATTATTGAAACAGAGGAGAAGAAGAAGAAGAAGGAGATTGTGAATATGGAGTTGGGATTAATGAGTGGAATGTATGTGAAAGTGAGCTTGGATGGAGCTCCATACCTAAGGAAGATTGATCTCAAGCTTTATCAAGGCTATCAACAATTGTTGGATGCTTTGGAAGACATGTTCAACTTCAAAATTGGTAACTAA

Protein sequence

MGRVRNKIRVLINAGEQKRLRAHTQDVTNELLQISQHSNPNPFHLFIFQRISLQFYINQAMKRQRLSSFQNLHHLNFEATELRLGLPQTSCRTEQQPAEERSSHSQISAKQSKSETRSGGRTDSNSILTSTNPSSDNHADHCHEHTKTQVVGWPPVRSYRKNVIIETEEKKKKKEIVNMELGLMSGMYVKVSLDGAPYLRKIDLKLYQGYQQLLDALEDMFNFKIGN

Homology

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BLAST of CsGy5G004690 vs. NCBI nr
Match: KGN50300.1 (hypothetical protein Csa_5G166440 [Cucumis sativus])

HSP 1 Score: 317.0 bits (811), Expect = 5.2e-83
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 61  MKRQRLSSFQNLHHLNFEATELRLGLPQTSCRTEQQPAEERSSHSQISAKQSKSETRSGG 120
           MKRQRLSSFQNLHHLNFEATELRLGLPQTSCRTEQQPAEERSSHSQISAKQSKSETRSGG
Sbjct: 1   MKRQRLSSFQNLHHLNFEATELRLGLPQTSCRTEQQPAEERSSHSQISAKQSKSETRSGG 60

Query: 121 RTDSNSILTSTNPSSDNHADHCHEHTKTQVVGWPPVRSYRKNVIIETEEXXXXKEIVNME 180
           RTDSNSILTSTNPSSDNHADHCHEHTKTQVVGWPPVRSYRKNVIIETEEXXXXKEIVNME
Sbjct: 61  RTDSNSILTSTNPSSDNHADHCHEHTKTQVVGWPPVRSYRKNVIIETEEXXXXKEIVNME 120

Query: 181 LGLMSGMYVKVSLDGAPYLRKIDLKLYQGYQQLLDALEDMFNFKIG 227
           LGLMSGMYVKVSLDGAPYLRKIDLKLYQGYQQLLDALEDMFNFKIG
Sbjct: 121 LGLMSGMYVKVSLDGAPYLRKIDLKLYQGYQQLLDALEDMFNFKIG 166

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BLAST of CsGy5G004690 vs. NCBI nr
Match: ADN34292.1 (auxin-responsive protein IAA [Cucumis melo subsp. melo])

HSP 1 Score: 252.3 bits (643), Expect = 1.6e-63
Identity = 151/215 (70.23%), Postives = 156/215 (72.56%), Query Frame = 0


Query: 17  QKRLRAHTQDVTNELLQISQHSNPNPFHLFIFQRISLQFYINQAMKRQRLSSFQNLHHLN 76
           +K   AHTQDVTN+LLQISQHSNPNPFHLFIFQRISLQFYINQAMKRQ LSSFQNLH LN
Sbjct: 5   RKGFHAHTQDVTNKLLQISQHSNPNPFHLFIFQRISLQFYINQAMKRQ-LSSFQNLHDLN 64

Query: 77  FEATELRLGLPQTSCRTEQQPAEERSSHSQISAKQSKSETRSGGRTDSNSILTSTNPSSD 136
           FEATELRLGLPQTSCRTEQQPA E +SHSQ+                             
Sbjct: 65  FEATELRLGLPQTSCRTEQQPA-EGNSHSQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 124

Query: 137 NHADHCHEHTKTQVVGWPPVRSYRKNVI-----IETEEXXXXKEIVNMELGLMSGMYVKV 196
                     KTQVVGWPPVRSYRKNVI          XXXX   VNMELGLMSGMYVKV
Sbjct: 125 XXXXXXXXXXKTQVVGWPPVRSYRKNVIXXXXXXXXXXXXXXXXXVNMELGLMSGMYVKV 184

Query: 197 SLDGAPYLRKIDLKLYQGYQQLLDALEDMFNFKIG 227
           SLDGAPYLRKIDLKLYQGYQQLLDALE+MFNFKIG
Sbjct: 185 SLDGAPYLRKIDLKLYQGYQQLLDALEEMFNFKIG 217

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BLAST of CsGy5G004690 vs. NCBI nr
Match: XP_008436982.2 (PREDICTED: auxin-induced protein 22D-like [Cucumis melo])

HSP 1 Score: 175.3 bits (443), Expect = 2.4e-40
Identity = 112/171 (65.50%), Postives = 115/171 (67.25%), Query Frame = 0


Query: 61  MKRQRLSSFQNLHHLNFEATELRLGLPQTSCRTEQQPAEERSSHSQISAKQSKSETRSGG 120
           MKRQ LSSFQNLH LNFEATELRLGLPQTSCRTEQQPA E +SHSQ+             
Sbjct: 1   MKRQ-LSSFQNLHDLNFEATELRLGLPQTSCRTEQQPA-EGNSHSQMXXXXXXXXXXXXX 60

Query: 121 RTDSNSILTSTNPSSDNHADHCHEHTKTQVVGWPPVRSYRKNVI-----IETEEXXXXKE 180
                                     KTQVVGWPPVRSYRKNVI          XXXX  
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXKTQVVGWPPVRSYRKNVIXXXXXXXXXXXXXXXX 120

Query: 181 IVNMELGLMSGMYVKVSLDGAPYLRKIDLKLYQGYQQLLDALEDMFNFKIG 227
            VNMELGLMSGMYVKVSLDGAPYLRKIDLKLYQGYQQLLDALE+MFNFKIG
Sbjct: 121 XVNMELGLMSGMYVKVSLDGAPYLRKIDLKLYQGYQQLLDALEEMFNFKIG 169

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BLAST of CsGy5G004690 vs. NCBI nr
Match: XP_023551434.1 (auxin-induced protein 22D-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 141.4 bits (355), Expect = 3.9e-30
Identity = 96/174 (55.17%), Postives = 105/174 (60.34%), Query Frame = 0


Query: 61  MKRQRLSSFQNLHHLNFEATELRLGLPQTSCRTEQQPAEERSSHSQISAKQSKSETRSGG 120
           MKRQ  +SF N+  LNFEATELRLGL     RTEQ                         
Sbjct: 1   MKRQ-FASFGNVRDLNFEATELRLGLLP---RTEQ---------XXXXXXXXXXXXXXXX 60

Query: 121 RTDSNSILTSTNPSSDNHADHCHE--------HTKTQVVGWPPVRSYRKNVIIETEEXXX 180
                  ++STNPSSD    HC E          K QVVGWPPVRSY KN+IIE E+   
Sbjct: 61  XXXXXXXISSTNPSSDAEHLHCREIHIIDHPPPAKAQVVGWPPVRSYLKNMIIEAEK-KI 120

Query: 181 XKEIVNMELGLMSGMYVKVSLDGAPYLRKIDLKLYQGYQQLLDALEDMFNFKIG 227
            KEI+N E+G  SGMYVKVSLDGAPYLRKIDLKLYQ YQQLLDALEDMFN K+G
Sbjct: 121 QKEIMNKEVG-SSGMYVKVSLDGAPYLRKIDLKLYQSYQQLLDALEDMFNIKLG 159

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BLAST of CsGy5G004690 vs. NCBI nr
Match: XP_022922244.1 (auxin-induced protein 22D-like [Cucurbita moschata])

HSP 1 Score: 139.8 bits (351), Expect = 1.1e-29
Identity = 95/174 (54.60%), Postives = 104/174 (59.77%), Query Frame = 0


Query: 61  MKRQRLSSFQNLHHLNFEATELRLGLPQTSCRTEQQPAEERSSHSQISAKQSKSETRSGG 120
           MKRQ  +SF N+  LNFEATELRLGL     RTEQ                         
Sbjct: 1   MKRQ-FASFGNVRDLNFEATELRLGLLP---RTEQ---------XXXXXXXXXXXXXXXX 60

Query: 121 RTDSNSILTSTNPSSDNHADHCHE--------HTKTQVVGWPPVRSYRKNVIIETEEXXX 180
                  ++STNPSSD    HC E          K QVVGWPPVRSY KN+IIE E+   
Sbjct: 61  XXXXXXXISSTNPSSDAEHLHCREIHIIDHPPPAKAQVVGWPPVRSYLKNMIIEAEK-KI 120

Query: 181 XKEIVNMELGLMSGMYVKVSLDGAPYLRKIDLKLYQGYQQLLDALEDMFNFKIG 227
            KEI+N E+G  SGMYVKVSLDGAPYLRKIDLKLYQ YQQLLD LEDMFN K+G
Sbjct: 121 QKEIMNKEVG-SSGMYVKVSLDGAPYLRKIDLKLYQSYQQLLDVLEDMFNIKLG 159

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BLAST of CsGy5G004690 vs. TAIR10
Match: AT1G04240.1 (AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 94.4 bits (233), Expect = 9.9e-20
Identity = 61/154 (39.61%), Postives = 84/154 (54.55%), Query Frame = 0


Query: 75  LNFEATELRLGLPQTS--CRTEQQPAEERSSHSQISAKQSKSETRSGGRTDSNSILTSTN 134
           +N + TELRLGLP T   C  +++ +   +++ ++ +  ++ E  S  R       T T+
Sbjct: 5   VNLKETELRLGLPGTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRK------TETS 64

Query: 135 PSSDNHADHCHEHTKTQVVGWPPVRSYRKNVIIETEEXXXXKEIVNMELGLMSGMYVKVS 194
           P             K Q+VGWPPVRSYRKN I   +     +           G+YVKVS
Sbjct: 65  PP-----------RKAQIVGWPPVRSYRKNNIQSKKNESEHEG---------QGIYVKVS 124

Query: 195 LDGAPYLRKIDLKLYQGYQQLLDALEDMFNFKIG 227
           +DGAPYLRKIDL  Y+GY +LL ALE MF F +G
Sbjct: 125 MDGAPYLRKIDLSCYKGYSELLKALEVMFKFSVG 132

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BLAST of CsGy5G004690 vs. TAIR10
Match: AT5G43700.1 (AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 90.1 bits (222), Expect = 1.9e-18
Identity = 59/152 (38.82%), Postives = 87/152 (57.24%), Query Frame = 0


Query: 75  LNFEATELRLGLPQTSCRTEQQPAEERSSHSQISAKQSKSETRSGGRTDSNSILTSTNPS 134
           +N +ATELRLGLP T     ++      S+ ++  + ++ E  S G+T+     T++ P 
Sbjct: 11  VNLKATELRLGLPGT-----EETVSCGKSNKRVLPEATEKEIESTGKTE-----TASPP- 70

Query: 135 SDNHADHCHEHTKTQVVGWPPVRSYRKNVIIETEEXXXXKEIVNMELGLMSGMYVKVSLD 194
                       K Q+VGWPPVRSYRKN  ++T++     +          G YVKVS+D
Sbjct: 71  ------------KAQIVGWPPVRSYRKN-NVQTKKSESEGQ----------GNYVKVSMD 128

Query: 195 GAPYLRKIDLKLYQGYQQLLDALEDMFNFKIG 227
           GAPYLRKIDL +Y+ Y +L+ +LE+MF F +G
Sbjct: 131 GAPYLRKIDLTMYKQYPELMKSLENMFKFSVG 128

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BLAST of CsGy5G004690 vs. TAIR10
Match: AT3G23030.1 (indole-3-acetic acid inducible 2)

HSP 1 Score: 84.0 bits (206), Expect = 1.3e-16
Identity = 65/159 (40.88%), Postives = 81/159 (50.94%), Query Frame = 0


Query: 68  SFQNLHHLNFEATELRLGLPQTSCRTEQQPAEERSSHSQISAKQSKSETRSGGRTDSNSI 127
           +++ ++ LN + TEL LGLP    RTE+   E+  S  + + K+   ETR          
Sbjct: 2   AYEKVNELNLKDTELCLGLPG---RTEKIKEEQEVSCVKSNNKRLFEETRDEEE------ 61

Query: 128 LTSTNPSSDNHADHCHEHTKTQVVGWPPVRSYRKNVIIETEEXXXXKEIVNMELGLMSGM 187
             ST P            TKTQ+VGWPPVRS RKN                      S  
Sbjct: 62  --STPP------------TKTQIVGWPPVRSSRKN--------------------NNSVS 117

Query: 188 YVKVSLDGAPYLRKIDLKLYQGYQQLLDALEDMFNFKIG 227
           YVKVS+DGAPYLRKIDLK Y+ Y +LL ALE+MF   IG
Sbjct: 122 YVKVSMDGAPYLRKIDLKTYKNYPELLKALENMFKVMIG 117

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BLAST of CsGy5G004690 vs. TAIR10
Match: AT2G22670.4 (indoleacetic acid-induced protein 8)

HSP 1 Score: 82.0 bits (201), Expect = 5.1e-16
Identity = 42/81 (51.85%), Postives = 54/81 (66.67%), Query Frame = 0


Query: 147 KTQVVGWPPVRSYRKNVIIETEEXXXXKEIVNMELGLMSGMYVKVSLDGAPYLRKIDLKL 206
           K QVVGWPP+RSYRKN +  +      +      LG+   ++VKVS+DGAPYLRK+DL+ 
Sbjct: 180 KAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGV---LFVKVSMDGAPYLRKVDLRT 239

Query: 207 YQGYQQLLDALEDMFN-FKIG 227
           Y  YQQL  ALE MF+ F +G
Sbjct: 240 YTSYQQLSSALEKMFSCFTLG 257

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BLAST of CsGy5G004690 vs. TAIR10
Match: AT4G29080.1 (phytochrome-associated protein 2)

HSP 1 Score: 81.3 bits (199), Expect = 8.7e-16
Identity = 43/87 (49.43%), Postives = 55/87 (63.22%), Query Frame = 0


Query: 146 TKTQVVGWPPVRSYRKNVIIETEEXXXXKEIVNMELGLMSG-----MYVKVSLDGAPYLR 205
           +K QVVGWPP+RS+RKN +  ++           E    SG     +YVKVS++GAPYLR
Sbjct: 140 SKAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLR 199

Query: 206 KIDLKLYQGYQQLLDALEDMFN-FKIG 227
           KIDLK Y+ Y +L  ALE MF+ F IG
Sbjct: 200 KIDLKTYKSYLELSSALEKMFSCFTIG 226

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BLAST of CsGy5G004690 vs. Swiss-Prot
Match: sp|O24543|AX22E_VIGRR (Auxin-induced protein 22E OS=Vigna radiata var. radiata OX=3916 GN=AUX22E PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.2e-19
Identity = 63/155 (40.65%), Postives = 93/155 (60.00%), Query Frame = 0


Query: 75  LNFEATELRLGLPQTSCRTEQQPAE---ERSSHSQISAKQSKSETRSGGRTDSNSILTST 134
           LN  ATELRLGLP +    E++P      RSS+ + S +  +S  +S   +DS     S 
Sbjct: 8   LNLRATELRLGLPGSDEPQEKRPCSGSVVRSSNKRSSPELEESRCKSNINSDS-----SD 67

Query: 135 NPSSDNHADHCHEHTKTQVVGWPPVRSYRKNVIIETEEXXXXKEIVNMELGLMSGMYVKV 194
           + ++ +H +   +  K QVVGWPP+RS+RKN + + +          +E G  +GMY+KV
Sbjct: 68  STTTSDHNEDSVQPAKVQVVGWPPIRSFRKNSLQQKK----------VEQGDGTGMYLKV 127

Query: 195 SLDGAPYLRKIDLKLYQGYQQLLDALEDMFNFKIG 227
           S+ GAPYLRKIDLK+Y+ Y +LL AL+++F    G
Sbjct: 128 SMAGAPYLRKIDLKVYKSYPELLKALQNLFKCTFG 147

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BLAST of CsGy5G004690 vs. Swiss-Prot
Match: sp|P32294|AX22B_VIGRR (Auxin-induced protein 22B OS=Vigna radiata var. radiata OX=3916 GN=AUX22B PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.0e-18
Identity = 63/160 (39.38%), Postives = 85/160 (53.12%), Query Frame = 0


Query: 75  LNFEATELRLGLPQTSCRTEQQPAEERSSHSQISAKQSKSETRSGGRTDSNSILTSTNPS 134
           LN +ATELRLGLP T      +  E+ +  +    + +K + R           TS +  
Sbjct: 11  LNLKATELRLGLPGT------EEKEDNNLRTHAVLRNNKRQVRE----------TSQDSV 70

Query: 135 SDNHADHCHEHTKT--------QVVGWPPVRSYRKNVIIETEEXXXXKEIVNMELGLMSG 194
           S + A H  +H +T        ++VGWPP+RSYRKN + E E                 G
Sbjct: 71  SISKASHHQQHVETVSAPPPKAKIVGWPPIRSYRKNSVQEGEG---------------DG 130

Query: 195 MYVKVSLDGAPYLRKIDLKLYQGYQQLLDALEDMFNFKIG 227
           ++VKVS+DGAPYLRK+DLK+Y GY +LL ALE MF   IG
Sbjct: 131 IFVKVSMDGAPYLRKVDLKVYGGYPELLKALETMFKLAIG 139

[Close]

BLAST of CsGy5G004690 vs. Swiss-Prot
Match: sp|Q38822|IAA3_ARATH (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana OX=3702 GN=IAA3 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.8e-18
Identity = 61/154 (39.61%), Postives = 84/154 (54.55%), Query Frame = 0


Query: 75  LNFEATELRLGLPQTS--CRTEQQPAEERSSHSQISAKQSKSETRSGGRTDSNSILTSTN 134
           +N + TELRLGLP T   C  +++ +   +++ ++ +  ++ E  S  R       T T+
Sbjct: 5   VNLKETELRLGLPGTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRK------TETS 64

Query: 135 PSSDNHADHCHEHTKTQVVGWPPVRSYRKNVIIETEEXXXXKEIVNMELGLMSGMYVKVS 194
           P             K Q+VGWPPVRSYRKN I   +     +           G+YVKVS
Sbjct: 65  PP-----------RKAQIVGWPPVRSYRKNNIQSKKNESEHEG---------QGIYVKVS 124

Query: 195 LDGAPYLRKIDLKLYQGYQQLLDALEDMFNFKIG 227
           +DGAPYLRKIDL  Y+GY +LL ALE MF F +G
Sbjct: 125 MDGAPYLRKIDLSCYKGYSELLKALEVMFKFSVG 132

[Close]

BLAST of CsGy5G004690 vs. Swiss-Prot
Match: sp|O24542|AX22D_VIGRR (Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.2e-18
Identity = 66/152 (43.42%), Postives = 86/152 (56.58%), Query Frame = 0


Query: 75  LNFEATELRLGLPQTSCRTEQQPAEERSSHSQISAKQSKSETRSGGRTDSNSILTSTNPS 134
           LN +ATELRLGLP +      +P +  ++ S    K+S  E      +D  SI   +N S
Sbjct: 12  LNLKATELRLGLPGS-----DEPEKRATARSN---KRSSPEA-----SDEESI---SNGS 71

Query: 135 SDNHADHCHEHTKTQVVGWPPVRSYRKNVIIETEEXXXXKEIVNMELGLMSGMYVKVSLD 194
                D+     K QVVGWPP+RSYRKN + + +E          E    +GMYVKVS+ 
Sbjct: 72  DVTKEDNVVPPAKAQVVGWPPIRSYRKNNVQQKKE----------EESEGNGMYVKVSMA 131

Query: 195 GAPYLRKIDLKLYQGYQQLLDALEDMFNFKIG 227
           GAPYLRKIDLK+Y+ Y +LL ALE+MF    G
Sbjct: 132 GAPYLRKIDLKVYKSYPELLKALENMFKCIFG 137

[Close]

BLAST of CsGy5G004690 vs. Swiss-Prot
Match: sp|P33077|IAA4_ARATH (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana OX=3702 GN=IAA4 PE=1 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 3.4e-17
Identity = 59/152 (38.82%), Postives = 87/152 (57.24%), Query Frame = 0


Query: 75  LNFEATELRLGLPQTSCRTEQQPAEERSSHSQISAKQSKSETRSGGRTDSNSILTSTNPS 134
           +N +ATELRLGLP T     ++      S+ ++  + ++ E  S G+T+     T++ P 
Sbjct: 11  VNLKATELRLGLPGT-----EETVSCGKSNKRVLPEATEKEIESTGKTE-----TASPP- 70

Query: 135 SDNHADHCHEHTKTQVVGWPPVRSYRKNVIIETEEXXXXKEIVNMELGLMSGMYVKVSLD 194
                       K Q+VGWPPVRSYRKN  ++T++     +          G YVKVS+D
Sbjct: 71  ------------KAQIVGWPPVRSYRKN-NVQTKKSESEGQ----------GNYVKVSMD 128

Query: 195 GAPYLRKIDLKLYQGYQQLLDALEDMFNFKIG 227
           GAPYLRKIDL +Y+ Y +L+ +LE+MF F +G
Sbjct: 131 GAPYLRKIDLTMYKQYPELMKSLENMFKFSVG 128

[Close]

BLAST of CsGy5G004690 vs. TrEMBL
Match: tr|A0A0A0KKT1|A0A0A0KKT1_CUCSA (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_5G166440 PE=3 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 3.4e-83
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 61  MKRQRLSSFQNLHHLNFEATELRLGLPQTSCRTEQQPAEERSSHSQISAKQSKSETRSGG 120
           MKRQRLSSFQNLHHLNFEATELRLGLPQTSCRTEQQPAEERSSHSQISAKQSKSETRSGG
Sbjct: 1   MKRQRLSSFQNLHHLNFEATELRLGLPQTSCRTEQQPAEERSSHSQISAKQSKSETRSGG 60

Query: 121 RTDSNSILTSTNPSSDNHADHCHEHTKTQVVGWPPVRSYRKNVIIETEEXXXXKEIVNME 180
           RTDSNSILTSTNPSSDNHADHCHEHTKTQVVGWPPVRSYRKNVIIETEEXXXXKEIVNME
Sbjct: 61  RTDSNSILTSTNPSSDNHADHCHEHTKTQVVGWPPVRSYRKNVIIETEEXXXXKEIVNME 120

Query: 181 LGLMSGMYVKVSLDGAPYLRKIDLKLYQGYQQLLDALEDMFNFKIG 227
           LGLMSGMYVKVSLDGAPYLRKIDLKLYQGYQQLLDALEDMFNFKIG
Sbjct: 121 LGLMSGMYVKVSLDGAPYLRKIDLKLYQGYQQLLDALEDMFNFKIG 166

[Close]

BLAST of CsGy5G004690 vs. TrEMBL
Match: tr|E5GCU3|E5GCU3_CUCME (Auxin-responsive protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.0e-63
Identity = 151/215 (70.23%), Postives = 156/215 (72.56%), Query Frame = 0


Query: 17  QKRLRAHTQDVTNELLQISQHSNPNPFHLFIFQRISLQFYINQAMKRQRLSSFQNLHHLN 76
           +K   AHTQDVTN+LLQISQHSNPNPFHLFIFQRISLQFYINQAMKRQ LSSFQNLH LN
Sbjct: 5   RKGFHAHTQDVTNKLLQISQHSNPNPFHLFIFQRISLQFYINQAMKRQ-LSSFQNLHDLN 64

Query: 77  FEATELRLGLPQTSCRTEQQPAEERSSHSQISAKQSKSETRSGGRTDSNSILTSTNPSSD 136
           FEATELRLGLPQTSCRTEQQPA E +SHSQ+                             
Sbjct: 65  FEATELRLGLPQTSCRTEQQPA-EGNSHSQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 124

Query: 137 NHADHCHEHTKTQVVGWPPVRSYRKNVI-----IETEEXXXXKEIVNMELGLMSGMYVKV 196
                     KTQVVGWPPVRSYRKNVI          XXXX   VNMELGLMSGMYVKV
Sbjct: 125 XXXXXXXXXXKTQVVGWPPVRSYRKNVIXXXXXXXXXXXXXXXXXVNMELGLMSGMYVKV 184

Query: 197 SLDGAPYLRKIDLKLYQGYQQLLDALEDMFNFKIG 227
           SLDGAPYLRKIDLKLYQGYQQLLDALE+MFNFKIG
Sbjct: 185 SLDGAPYLRKIDLKLYQGYQQLLDALEEMFNFKIG 217

[Close]

BLAST of CsGy5G004690 vs. TrEMBL
Match: tr|A0A1S3ASK8|A0A1S3ASK8_CUCME (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103482549 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.6e-40
Identity = 112/171 (65.50%), Postives = 115/171 (67.25%), Query Frame = 0


Query: 61  MKRQRLSSFQNLHHLNFEATELRLGLPQTSCRTEQQPAEERSSHSQISAKQSKSETRSGG 120
           MKRQ LSSFQNLH LNFEATELRLGLPQTSCRTEQQPA E +SHSQ+             
Sbjct: 1   MKRQ-LSSFQNLHDLNFEATELRLGLPQTSCRTEQQPA-EGNSHSQMXXXXXXXXXXXXX 60

Query: 121 RTDSNSILTSTNPSSDNHADHCHEHTKTQVVGWPPVRSYRKNVI-----IETEEXXXXKE 180
                                     KTQVVGWPPVRSYRKNVI          XXXX  
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXKTQVVGWPPVRSYRKNVIXXXXXXXXXXXXXXXX 120

Query: 181 IVNMELGLMSGMYVKVSLDGAPYLRKIDLKLYQGYQQLLDALEDMFNFKIG 227
            VNMELGLMSGMYVKVSLDGAPYLRKIDLKLYQGYQQLLDALE+MFNFKIG
Sbjct: 121 XVNMELGLMSGMYVKVSLDGAPYLRKIDLKLYQGYQQLLDALEEMFNFKIG 169

[Close]

BLAST of CsGy5G004690 vs. TrEMBL
Match: tr|L0ATS2|L0ATS2_POPTO (Auxin-responsive protein OS=Populus tomentosa OX=118781 PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.6e-24
Identity = 69/152 (45.39%), Postives = 95/152 (62.50%), Query Frame = 0


Query: 75  LNFEATELRLGLPQTSCRTEQQPAEERSSHSQISAKQSKSETRSGGRTDSNSILTSTNPS 134
           LN +ATELRLGLP TSC  E+Q A   + +++    +++ E  + G +D       T P+
Sbjct: 11  LNLKATELRLGLPGTSCTNEEQ-AVSGARNNKRPLPETREERGAKGNSDPRHDDQETAPA 70

Query: 135 SDNHADHCHEHTKTQVVGWPPVRSYRKNVIIETEEXXXXKEIVNMELGLMSGMYVKVSLD 194
            + H+ H H   + Q+VGWPP+RSYRKN++          +    E    +GMYVKVS+D
Sbjct: 71  PNTHSFHVHATCRAQIVGWPPIRSYRKNIL----------QPKKAEAEAAAGMYVKVSMD 130

Query: 195 GAPYLRKIDLKLYQGYQQLLDALEDMFNFKIG 227
           GAPYLRKIDLK+Y+GY +LL ALE+MF   IG
Sbjct: 131 GAPYLRKIDLKVYKGYPELLKALENMFKLTIG 151

[Close]

BLAST of CsGy5G004690 vs. TrEMBL
Match: tr|R4TV48|R4TV48_POPTO (Auxin-responsive protein OS=Populus tomentosa OX=118781 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 8.9e-23
Identity = 79/178 (44.38%), Postives = 108/178 (60.67%), Query Frame = 0


Query: 56  YINQAM-KRQRLSSFQNLHHLNFEATELRLGLPQTSCRTEQQPAEERSSHSQISAKQSKS 115
           YI +++ K +R   F+    LN EATELRLGLP T+  TEQ   +  +S+   S K+S  
Sbjct: 66  YIQRSLNKEKRRMEFE--RDLNLEATELRLGLPGTA--TEQLEKQTPNSNVTKSNKRSLP 125

Query: 116 ETR--SGGRTDSNSILTSTNPSSDNHADHCHEHTKTQVVGWPPVRSYRKNVI----IETE 175
           +    S GR +S+S+ ++   S   H       TKTQVVGWPP+RSYRKN +    +E E
Sbjct: 126 DMNEDSAGRRESSSVSSNDKKS---HEQETAPPTKTQVVGWPPIRSYRKNCLQARKLEAE 185

Query: 176 EXXXXKEIVNMELGLMSGMYVKVSLDGAPYLRKIDLKLYQGYQQLLDALEDMFNFKIG 227
                           +G+YVKVS+DGAPYLRKIDLK+Y+GY +LL+ +E+MF FK+G
Sbjct: 186 ---------------AAGLYVKVSMDGAPYLRKIDLKVYKGYPELLEVVEEMFKFKVG 221

The following BLAST results are available for this feature:

BLAST of CsGy5G004690 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN50300.1	5.2e-83	100.00	hypothetical protein Csa_5G166440 [Cucumis sativus]	[more]
ADN34292.1	1.6e-63	70.23	auxin-responsive protein IAA [Cucumis melo subsp. melo]	[more]
XP_008436982.2	2.4e-40	65.50	PREDICTED: auxin-induced protein 22D-like [Cucumis melo]	[more]
XP_023551434.1	3.9e-30	55.17	auxin-induced protein 22D-like [Cucurbita pepo subsp. pepo]	[more]
XP_022922244.1	1.1e-29	54.60	auxin-induced protein 22D-like [Cucurbita moschata]	[more]

BLAST of CsGy5G004690 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G04240.1	9.9e-20	39.61	AUX/IAA transcriptional regulator family protein	[more]
AT5G43700.1	1.9e-18	38.82	AUX/IAA transcriptional regulator family protein	[more]
AT3G23030.1	1.3e-16	40.88	indole-3-acetic acid inducible 2	[more]
AT2G22670.4	5.1e-16	51.85	indoleacetic acid-induced protein 8	[more]
AT4G29080.1	8.7e-16	49.43	phytochrome-associated protein 2	[more]

BLAST of CsGy5G004690 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O24543\|AX22E_VIGRR	1.2e-19	40.65	Auxin-induced protein 22E OS=Vigna radiata var. radiata OX=3916 GN=AUX22E PE=2 S...	[more]
sp\|P32294\|AX22B_VIGRR	1.0e-18	39.38	Auxin-induced protein 22B OS=Vigna radiata var. radiata OX=3916 GN=AUX22B PE=2 S...	[more]
sp\|Q38822\|IAA3_ARATH	1.8e-18	39.61	Auxin-responsive protein IAA3 OS=Arabidopsis thaliana OX=3702 GN=IAA3 PE=1 SV=1	[more]
sp\|O24542\|AX22D_VIGRR	5.2e-18	43.42	Auxin-induced protein 22D OS=Vigna radiata var. radiata OX=3916 GN=AUX22D PE=2 S...	[more]
sp\|P33077\|IAA4_ARATH	3.4e-17	38.82	Auxin-responsive protein IAA4 OS=Arabidopsis thaliana OX=3702 GN=IAA4 PE=1 SV=2	[more]

BLAST of CsGy5G004690 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KKT1\|A0A0A0KKT1_CUCSA	3.4e-83	100.00	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_5G166440 PE=3 SV=1	[more]
tr\|E5GCU3\|E5GCU3_CUCME	1.0e-63	70.23	Auxin-responsive protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
tr\|A0A1S3ASK8\|A0A1S3ASK8_CUCME	1.6e-40	65.50	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103482549 PE=3 SV=1	[more]
tr\|L0ATS2\|L0ATS2_POPTO	1.6e-24	45.39	Auxin-responsive protein OS=Populus tomentosa OX=118781 PE=3 SV=1	[more]
tr\|R4TV48\|R4TV48_POPTO	8.9e-23	44.38	Auxin-responsive protein OS=Populus tomentosa OX=118781 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR000270	PB1_dom
IPR003311	AUX_IAA
IPR033389	AUX/IAA_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G004690.1	CsGy5G004690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.10.20.90		coord: 182..227 e-value: 8.3E-14 score: 53.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..147
None	No IPR available	PANTHER	PTHR31734:SF8	SUBFAMILY NOT NAMED	coord: 75..227
None	No IPR available	SUPERFAMILY	SSF54277	CAD & PB1 domains	coord: 185..225
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 80..222 e-value: 1.8E-34 score: 119.6
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	FAMILY NOT NAMED	coord: 75..227
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 186..227 score: 14.55

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G004690	Cla003635	Watermelon (97103) v1	cgybwmB388
CsGy5G004690	Csa5G166440	Cucumber (Chinese Long) v2	cgybcuB224
CsGy5G004690	MELO3C005476	Melon (DHL92) v3.5.1	cgybmeB296
CsGy5G004690	CSPI05G07260	Wild cucumber (PI 183967)	cgybcpiB226
CsGy5G004690	Lsi09G004710	Bottle gourd (USVL1VR-Ls)	cgyblsiB294
CsGy5G004690	MELO3C005476.2	Melon (DHL92) v3.6.1	cgybmedB296
CsGy5G004690	CsaV3_5G004700	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G004690	Cla97C01G004700	Watermelon (97103) v2	cgybwmbB319
CsGy5G004690	Bhi12G000447	Wax gourd	cgybwgoB414
CsGy5G004690	Carg23179	Silver-seed gourd	carcgybB0549

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G004690	Cucurbita maxima (Rimu)	cgybcmaB608
CsGy5G004690	Cucurbita moschata (Rifu)	cgybcmoB583
CsGy5G004690	Cucurbita pepo (Zucchini)	cgybcpeB597
CsGy5G004690	Cucurbita pepo (Zucchini)	cgybcpeB695
CsGy5G004690	Cucumber (Chinese Long) v2	cgybcuB209
CsGy5G004690	Watermelon (Charleston Gray)	cgybwcgB332
CsGy5G004690	Cucumber (Chinese Long) v3	cgybcucB215
CsGy5G004690	Wax gourd	cgybwgoB432