CsGy5G003990 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G003990
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	14 kDa proline-rich protein DC2.15-like
Location	Chr5 : 2689947 .. 2690327 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCAAAGCTACTGCCACTCTTGCCTTCCTCCTCGCTCTTAATCTCTTTTTCTTCTCTCTCGTCTTTGCCCACAATGACCGTTATGTTTCGTCAAACCCTAATCATACACCTATCCATGAGGATGGAAAAAAGTGCCTAAAAAATACTCTTAAGCTTGGAGTTTGTGCAAAATTGCTCGGTAATCTTGTTGATGTTACGCTCGGCAAGTCTTCATGTTGCCCTTTGATCCAAGGGCTTGCTGATCTTGATGCTGCTGTCTGTCTTTGCAGTGCTCTTAAAGCCAGTGTGTTGGGAAGCAACCTCAATATCCCACTCTCACTCTCCTTGATTCTCAATGCTTGCAATAAGAAAGTTCCAAATGGCTTCCATTGCTAA

mRNA sequence

ATGGCTTCCAAAGCTACTGCCACTCTTGCCTTCCTCCTCGCTCTTAATCTCTTTTTCTTCTCTCTCGTCTTTGCCCACAATGACCGTTATGTTTCGTCAAACCCTAATCATACACCTATCCATGAGGATGGAAAAAAGTGCCTAAAAAATACTCTTAAGCTTGGAGTTTGTGCAAAATTGCTCGGTAATCTTGTTGATGTTACGCTCGGCAAGTCTTCATGTTGCCCTTTGATCCAAGGGCTTGCTGATCTTGATGCTGCTGTCTGTCTTTGCAGTGCTCTTAAAGCCAGTGTGTTGGGAAGCAACCTCAATATCCCACTCTCACTCTCCTTGATTCTCAATGCTTGCAATAAGAAAGTTCCAAATGGCTTCCATTGCTAA

Coding sequence (CDS)

ATGGCTTCCAAAGCTACTGCCACTCTTGCCTTCCTCCTCGCTCTTAATCTCTTTTTCTTCTCTCTCGTCTTTGCCCACAATGACCGTTATGTTTCGTCAAACCCTAATCATACACCTATCCATGAGGATGGAAAAAAGTGCCTAAAAAATACTCTTAAGCTTGGAGTTTGTGCAAAATTGCTCGGTAATCTTGTTGATGTTACGCTCGGCAAGTCTTCATGTTGCCCTTTGATCCAAGGGCTTGCTGATCTTGATGCTGCTGTCTGTCTTTGCAGTGCTCTTAAAGCCAGTGTGTTGGGAAGCAACCTCAATATCCCACTCTCACTCTCCTTGATTCTCAATGCTTGCAATAAGAAAGTTCCAAATGGCTTCCATTGCTAA

Protein sequence

MASKATATLAFLLALNLFFFSLVFAHNDRYVSSNPNHTPIHEDGKKCLKNTLKLGVCAKLLGNLVDVTLGKSSCCPLIQGLADLDAAVCLCSALKASVLGSNLNIPLSLSLILNACNKKVPNGFHC

Homology

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BLAST of CsGy5G003990 vs. NCBI nr
Match: KGN50231.1 (hypothetical protein Csa_5G161310 [Cucumis sativus])

HSP 1 Score: 251.1 bits (640), Expect = 1.9e-63
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MASKATATLAFLLALNLFFFSLVFAHNDRYVSSNPNHTPIHEDGKKCLKNTLKLGVCAKL 60
           MASKATATLAFLLALNLFFFSLVFAHNDRYVSSNPNHTPIHEDGKKCLKNTLKLGVCAKL
Sbjct: 1   MASKATATLAFLLALNLFFFSLVFAHNDRYVSSNPNHTPIHEDGKKCLKNTLKLGVCAKL 60

Query: 61  LGNLVDVTLGKSSCCPLIQGLADLDAAVCLCSALKASVLGSNLNIPLSLSLILNACNKKV 120
           LGNLVDVTLGKSSCCPLIQGLADLDAAVCLCSALKASVLGSNLNIPLSLSLILNACNKKV
Sbjct: 61  LGNLVDVTLGKSSCCPLIQGLADLDAAVCLCSALKASVLGSNLNIPLSLSLILNACNKKV 120

Query: 121 PNGFHC 127
           PNGFHC
Sbjct: 121 PNGFHC 126

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BLAST of CsGy5G003990 vs. NCBI nr
Match: XP_008437113.1 (PREDICTED: pEARLI1-like lipid transfer protein 1 [Cucumis melo])

HSP 1 Score: 225.3 bits (573), Expect = 1.1e-55
Identity = 114/126 (90.48%), Postives = 119/126 (94.44%), Query Frame = 0


Query: 1   MASKATATLAFLLALNLFFFSLVFAHNDRYVSSNPNHTPIHEDGKKCLKNTLKLGVCAKL 60
           MASKATATLAFLLALNLFFFSLVFA+ND YV S+PNHTP HEDG KC K+TLKL VCAKL
Sbjct: 1   MASKATATLAFLLALNLFFFSLVFAYNDGYVPSHPNHTPNHEDGNKCPKDTLKLEVCAKL 60

Query: 61  LGNLVDVTLGKSSCCPLIQGLADLDAAVCLCSALKASVLGSNLNIPLSLSLILNACNKKV 120
           LGNLVDV LGKSSCCPLIQGLADLDAAVCLC+ALKA+VLGSNLNIPLSLSLILNACNKKV
Sbjct: 61  LGNLVDVKLGKSSCCPLIQGLADLDAAVCLCTALKANVLGSNLNIPLSLSLILNACNKKV 120

Query: 121 PNGFHC 127
           PNGFHC
Sbjct: 121 PNGFHC 126

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BLAST of CsGy5G003990 vs. NCBI nr
Match: XP_011656155.1 (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis sativus])

HSP 1 Score: 194.5 bits (493), Expect = 2.2e-46
Identity = 105/124 (84.68%), Postives = 112/124 (90.32%), Query Frame = 0


Query: 1   MASKATATLAFLLALNLFFFSLVFAHNDRYVSSNPNHTPIHEDGKKCLKNTLKLGVCAKL 60
           MASKATATLAFLLALNLFFFSLVFAHNDRYVSSNPNHTPIHEDGKKCLKNTLKLGVCAKL
Sbjct: 1   MASKATATLAFLLALNLFFFSLVFAHNDRYVSSNPNHTPIHEDGKKCLKNTLKLGVCAKL 60

Query: 61  LGNLVDVTLGKSSCCPLIQGLADLDAAVCLCSALKASVLG---SNLNIPLSLSLI----L 118
           LGNLVDVTLGKSSCCPLIQGLADLDAAVCLCSALKASV     ++L   LSL+L+    +
Sbjct: 61  LGNLVDVTLGKSSCCPLIQGLADLDAAVCLCSALKASVASKATASLAFLLSLNLLFFTFV 120

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BLAST of CsGy5G003990 vs. NCBI nr
Match: XP_022154817.1 (14 kDa proline-rich protein DC2.15-like [Momordica charantia])

HSP 1 Score: 169.5 bits (428), Expect = 7.4e-39
Identity = 91/129 (70.54%), Postives = 106/129 (82.17%), Query Frame = 0


Query: 1   MASKATATLAFLLALNLFFFSLVFAHNDRYVSSNPNHTPIHEDGKKCLKNTLKLGVCAKL 60
           MASKATA+LAFLL+LNL   SLV A ND Y  S+P+ TP  E GKKC KNTLKLGVCAKL
Sbjct: 1   MASKATASLAFLLSLNL-LLSLVTACNDCYAPSHPHPTPSPEQGKKCPKNTLKLGVCAKL 60

Query: 61  LGNLVDVTLGK---SSCCPLIQGLADLDAAVCLCSALKASVLGSNLNIPLSLSLILNACN 120
           LG LV+V++G    + CC LI GLADL+AAVCLC+A+KA+VLG+NLNIPLSLSL+LNACN
Sbjct: 61  LGGLVNVSIGHPPVTPCCSLINGLADLEAAVCLCTAIKANVLGNNLNIPLSLSLLLNACN 120

Query: 121 KKVPNGFHC 127
           K +PNGF C
Sbjct: 121 KNLPNGFQC 128

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BLAST of CsGy5G003990 vs. NCBI nr
Match: XP_022154816.1 (14 kDa proline-rich protein DC2.15-like [Momordica charantia])

HSP 1 Score: 168.7 bits (426), Expect = 1.3e-38
Identity = 90/129 (69.77%), Postives = 104/129 (80.62%), Query Frame = 0


Query: 1   MASKATATLAFLLALNLFFFSLVFAHNDRYVSSNPNHTPIHEDGKKCLKNTLKLGVCAKL 60
           MASKA A+LAFLL+LNL   SL+ A ND Y  S+P+ TP  E GKKC KNTLKLGVCAKL
Sbjct: 1   MASKAIASLAFLLSLNL-LLSLIAACNDCYAPSHPHPTPSPEQGKKCPKNTLKLGVCAKL 60

Query: 61  LGNLVDVTLGK---SSCCPLIQGLADLDAAVCLCSALKASVLGSNLNIPLSLSLILNACN 120
           LG LVDVT+G    + CC LI GLADL+AAVCLC+A+KA+VLG+NLNIPLSLSL+LN CN
Sbjct: 61  LGGLVDVTIGHPPVTPCCSLINGLADLEAAVCLCTAIKANVLGNNLNIPLSLSLLLNVCN 120

Query: 121 KKVPNGFHC 127
           K +PNGF C
Sbjct: 121 KNLPNGFQC 128

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BLAST of CsGy5G003990 vs. TAIR10
Match: AT1G12090.1 (extensin-like protein)

HSP 1 Score: 116.3 bits (290), Expect = 1.4e-26
Identity = 65/136 (47.79%), Postives = 86/136 (63.24%), Query Frame = 0


Query: 5   ATATLAFLLALNLFFFSLVFA-----------HNDRYVSSNPNHTPIHEDGKKCLKNTLK 64
           A++++A  LALNL FF+ + A                               KC K+TLK
Sbjct: 2   ASSSIALFLALNLLFFTTISACGSCTPCGGGXXXXXXXXXXXXXXXXXXXXXKCPKDTLK 61

Query: 65  LGVCAKLLGNLVDVTLGK---SSCCPLIQGLADLDAAVCLCSALKASVLGSNLNIPLSLS 124
           LGVCA +L  L+D+TLGK     CC LIQGLAD++AAVCLC+ALKA++LG NLN+P+SLS
Sbjct: 62  LGVCANVLNGLLDLTLGKPPVEPCCSLIQGLADVEAAVCLCTALKANILGINLNLPISLS 121

Query: 125 LILNACNKKVPNGFHC 127
           L+LN C+K++P GF C
Sbjct: 122 LLLNVCSKQLPPGFQC 137

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BLAST of CsGy5G003990 vs. TAIR10
Match: AT1G62510.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 116.3 bits (290), Expect = 1.4e-26
Identity = 69/149 (46.31%), Postives = 85/149 (57.05%), Query Frame = 0


Query: 1   MASKATATLAFLLALNLFFFSLVFAHND--------------------RYVSSNPNHTPI 60
           MAS+ T +LA  L LN  FF+ + A  +                                
Sbjct: 1   MASRTTKSLALFLILNFLFFTTISACGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  HEDGKKCLKNTLKLGVCAKLLGNLVDVTLGK---SSCCPLIQGLADLDAAVCLCSALKAS 120
                KC ++ LKLGVCA +L  L++VTLGK     CC LIQGLADL+AA CLC+ALKA+
Sbjct: 61  XXXXXKCPRDALKLGVCANVLNGLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKAN 120

Query: 121 VLGSNLNIPLSLSLILNACNKKVPNGFHC 127
           +LG NLNIPLSLSL+LN C+KKVP GF C
Sbjct: 121 ILGINLNIPLSLSLLLNVCSKKVPRGFQC 149

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BLAST of CsGy5G003990 vs. TAIR10
Match: AT4G12520.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 114.0 bits (284), Expect = 6.7e-26
Identity = 64/129 (49.61%), Postives = 80/129 (62.02%), Query Frame = 0


Query: 1   MASKATATLAFLLALNLFFFSLVFAHNDRYVSSNPNHTPIHEDGKKCLKNTLKLGVCAKL 60
           MASK +A+L   L  N+ FF+L  A                  G  C K+TLKLGVCA +
Sbjct: 1   MASKISASLVIFLTFNILFFTLTTACGGXXXXXXXXXXXXXXTG-SCPKDTLKLGVCANV 60

Query: 61  LGNLVDVTLGK---SSCCPLIQGLADLDAAVCLCSALKASVLGSNLNIPLSLSLILNACN 120
           L +L+ + LG      CC L+ GL DL+AA CLC+ALKA VLG NLN+P+SLSL+LN C 
Sbjct: 61  LKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLGINLNVPVSLSLLLNVCG 120

Query: 121 KKVPNGFHC 127
           KKVP+GF C
Sbjct: 121 KKVPSGFVC 128

[Close]

BLAST of CsGy5G003990 vs. TAIR10
Match: AT4G12510.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 114.0 bits (284), Expect = 6.7e-26
Identity = 64/129 (49.61%), Postives = 80/129 (62.02%), Query Frame = 0


Query: 1   MASKATATLAFLLALNLFFFSLVFAHNDRYVSSNPNHTPIHEDGKKCLKNTLKLGVCAKL 60
           MASK +A+L   L  N+ FF+L  A                  G  C K+TLKLGVCA +
Sbjct: 1   MASKISASLVIFLTFNILFFTLTTACGGXXXXXXXXXXXXXXTG-SCPKDTLKLGVCANV 60

Query: 61  LGNLVDVTLGK---SSCCPLIQGLADLDAAVCLCSALKASVLGSNLNIPLSLSLILNACN 120
           L +L+ + LG      CC L+ GL DL+AA CLC+ALKA VLG NLN+P+SLSL+LN C 
Sbjct: 61  LKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVLGINLNVPVSLSLLLNVCG 120

Query: 121 KKVPNGFHC 127
           KKVP+GF C
Sbjct: 121 KKVPSGFVC 128

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BLAST of CsGy5G003990 vs. TAIR10
Match: AT4G12480.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 111.7 bits (278), Expect = 3.3e-25
Identity = 67/168 (39.88%), Postives = 92/168 (54.76%), Query Frame = 0


Query: 1   MASKATATLAFLLALNLFFFSLVFAHNDRYVSSNPNHTPIHEDGK--------------- 60
           MASK +A++A   ALN+ FF+L  A  D   + +P H P                     
Sbjct: 1   MASKNSASIALFFALNIIFFTLT-AATDCGCNPSPKHKPXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  ------------------------KCLKNTLKLGVCAKLLGNLVDVTLGKSS---CCPLI 120
                                    C  + L+LGVCA +L +L+++ LG+ S   CC LI
Sbjct: 61  VPSXXXXXXXXXXXXXXXXXXXXGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLI 120

Query: 121 QGLADLDAAVCLCSALKASVLGSNLNIPLSLSLILNACNKKVPNGFHC 127
           QGL DLDAA+CLC+AL+A+VLG NLN+P+SLS++LN CN+KVP+GF C
Sbjct: 121 QGLVDLDAAICLCTALRANVLGINLNVPISLSVLLNVCNRKVPSGFQC 167

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BLAST of CsGy5G003990 vs. Swiss-Prot
Match: sp|Q39176|ERLI1_ARATH (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 6.0e-24
Identity = 67/168 (39.88%), Postives = 92/168 (54.76%), Query Frame = 0


Query: 1   MASKATATLAFLLALNLFFFSLVFAHNDRYVSSNPNHTPIHEDGK--------------- 60
           MASK +A++A   ALN+ FF+L  A  D   + +P H P                     
Sbjct: 1   MASKNSASIALFFALNIIFFTLT-AATDCGCNPSPKHKPXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  ------------------------KCLKNTLKLGVCAKLLGNLVDVTLGKSS---CCPLI 120
                                    C  + L+LGVCA +L +L+++ LG+ S   CC LI
Sbjct: 61  VPSXXXXXXXXXXXXXXXXXXXXGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLI 120

Query: 121 QGLADLDAAVCLCSALKASVLGSNLNIPLSLSLILNACNKKVPNGFHC 127
           QGL DLDAA+CLC+AL+A+VLG NLN+P+SLS++LN CN+KVP+GF C
Sbjct: 121 QGLVDLDAAICLCTALRANVLGINLNVPISLSVLLNVCNRKVPSGFQC 167

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BLAST of CsGy5G003990 vs. Swiss-Prot
Match: sp|Q9SU35|ERLL1_ARATH (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 6.6e-23
Identity = 65/161 (40.37%), Postives = 87/161 (54.04%), Query Frame = 0


Query: 1   MASKATATLAFLLALNLFFF--------------------------------SLVFAHND 60
           MASK +A+LA   ALN+ FF                                        
Sbjct: 1   MASKNSASLALFFALNILFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  RYVSSNPNHTPIHEDGKKCLKNTLKLGVCAKLLGNLVDVTLGKSS---CCPLIQGLADLD 120
                 P  TP    G  C  + LKLGVCA +L +L+++ LG+ S   CC LIQGL D+D
Sbjct: 61  XXXXXTPPRTP-GSSGNSCPIDALKLGVCANVLSSLLNIQLGQPSSQQCCSLIQGLVDVD 120

Query: 121 AAVCLCSALKASVLGSNLNIPLSLSLILNACNKKVPNGFHC 127
           AA+CLC+AL+A+VLG NLN+P+SLS++LN CN+K+P+GF C
Sbjct: 121 AAICLCTALRANVLGINLNVPISLSVLLNVCNRKLPSGFQC 160

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BLAST of CsGy5G003990 vs. Swiss-Prot
Match: sp|P14009|14KD_DAUCA (14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.6e-22
Identity = 57/136 (41.91%), Postives = 83/136 (61.03%), Query Frame = 0


Query: 1   MASKATATLAFLLALNLFFFSLVFA-------HNDRYVSSNPNHTPIHEDGKKCLKNTLK 60
           M SK +A++A    LN+ FF+LV +       +                   KC ++ LK
Sbjct: 1   MGSKNSASVALFFTLNILFFALVSSTEKCPDPYXXXXXXXXXXXXXXXXXAGKCPRDALK 60

Query: 61  LGVCAKLLGNLVDVTLGKS---SCCPLIQGLADLDAAVCLCSALKASVLGSNLNIPLSLS 120
           LGVCA +L  + +V +G      CC L++GL +L+AAVCLC+A+KA++LG NLN+P++LS
Sbjct: 61  LGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILGKNLNLPIALS 120

Query: 121 LILNACNKKVPNGFHC 127
           L+LN C K+VPNGF C
Sbjct: 121 LVLNNCGKQVPNGFEC 136

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BLAST of CsGy5G003990 vs. Swiss-Prot
Match: sp|Q9SU34|ERLL2_ARATH (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g12490 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.6e-21
Identity = 49/83 (59.04%), Postives = 66/83 (79.52%), Query Frame = 0


Query: 47  CLKNTLKLGVCAKLLGNLVDVTLGKSS---CCPLIQGLADLDAAVCLCSALKASVLGSNL 106
           C  + L+LGVCA +L  L++V LG+ S   CC LIQGL DLDAAVCLC+AL+A+VLG NL
Sbjct: 99  CPIDALRLGVCANVLSGLLNVQLGQPSPQPCCSLIQGLVDLDAAVCLCTALRANVLGINL 158

Query: 107 NIPLSLSLILNACNKKVPNGFHC 127
           N+P+SLS++LN CN+++P+ F C
Sbjct: 159 NVPISLSVLLNVCNRRLPSNFQC 181

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BLAST of CsGy5G003990 vs. Swiss-Prot
Match: sp|Q9SU33|ERLL3_ARATH (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g12500 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.8e-21
Identity = 48/83 (57.83%), Postives = 66/83 (79.52%), Query Frame = 0


Query: 47  CLKNTLKLGVCAKLLGNLVDVTLGKSS---CCPLIQGLADLDAAVCLCSALKASVLGSNL 106
           C  + L+LGVCA +L  L++V LG+ S   CC LIQGL DLDAA+CLC+AL+A+VLG NL
Sbjct: 94  CPIDALRLGVCANVLSGLLNVQLGQPSAQPCCSLIQGLVDLDAAICLCTALRANVLGINL 153

Query: 107 NIPLSLSLILNACNKKVPNGFHC 127
           N+P+SLS++LN CN+++P+ F C
Sbjct: 154 NVPISLSVLLNVCNRRLPSDFQC 176

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BLAST of CsGy5G003990 vs. TrEMBL
Match: tr|A0A0A0KR80|A0A0A0KR80_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G161310 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.3e-63
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MASKATATLAFLLALNLFFFSLVFAHNDRYVSSNPNHTPIHEDGKKCLKNTLKLGVCAKL 60
           MASKATATLAFLLALNLFFFSLVFAHNDRYVSSNPNHTPIHEDGKKCLKNTLKLGVCAKL
Sbjct: 1   MASKATATLAFLLALNLFFFSLVFAHNDRYVSSNPNHTPIHEDGKKCLKNTLKLGVCAKL 60

Query: 61  LGNLVDVTLGKSSCCPLIQGLADLDAAVCLCSALKASVLGSNLNIPLSLSLILNACNKKV 120
           LGNLVDVTLGKSSCCPLIQGLADLDAAVCLCSALKASVLGSNLNIPLSLSLILNACNKKV
Sbjct: 61  LGNLVDVTLGKSSCCPLIQGLADLDAAVCLCSALKASVLGSNLNIPLSLSLILNACNKKV 120

Query: 121 PNGFHC 127
           PNGFHC
Sbjct: 121 PNGFHC 126

[Close]

BLAST of CsGy5G003990 vs. TrEMBL
Match: tr|A0A1S3ATT5|A0A1S3ATT5_CUCME (pEARLI1-like lipid transfer protein 1 OS=Cucumis melo OX=3656 GN=LOC103482630 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 7.5e-56
Identity = 114/126 (90.48%), Postives = 119/126 (94.44%), Query Frame = 0


Query: 1   MASKATATLAFLLALNLFFFSLVFAHNDRYVSSNPNHTPIHEDGKKCLKNTLKLGVCAKL 60
           MASKATATLAFLLALNLFFFSLVFA+ND YV S+PNHTP HEDG KC K+TLKL VCAKL
Sbjct: 1   MASKATATLAFLLALNLFFFSLVFAYNDGYVPSHPNHTPNHEDGNKCPKDTLKLEVCAKL 60

Query: 61  LGNLVDVTLGKSSCCPLIQGLADLDAAVCLCSALKASVLGSNLNIPLSLSLILNACNKKV 120
           LGNLVDV LGKSSCCPLIQGLADLDAAVCLC+ALKA+VLGSNLNIPLSLSLILNACNKKV
Sbjct: 61  LGNLVDVKLGKSSCCPLIQGLADLDAAVCLCTALKANVLGSNLNIPLSLSLILNACNKKV 120

Query: 121 PNGFHC 127
           PNGFHC
Sbjct: 121 PNGFHC 126

[Close]

BLAST of CsGy5G003990 vs. TrEMBL
Match: tr|A0A1S3ATC3|A0A1S3ATC3_CUCME (lipid transfer protein EARLI 1-like OS=Cucumis melo OX=3656 GN=LOC103482624 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.3e-34
Identity = 84/126 (66.67%), Postives = 94/126 (74.60%), Query Frame = 0


Query: 1   MASKATATLAFLLALNLFFFSLVFAHNDRYVSSNPNHTPIHEDGKKCLKNTLKLGVCAKL 60
           MASKAT +LAFLLALNL F S V+A                ED KKC  +TLKLGVCAKL
Sbjct: 1   MASKATVSLAFLLALNLIFSSFVYA----------------EDDKKCPTDTLKLGVCAKL 60

Query: 61  LGNLVDVTLGKSSCCPLIQGLADLDAAVCLCSALKASVLGSNLNIPLSLSLILNACNKKV 120
           LG +VDV +GK+SCCPLIQGLADLDAAVCLC+ALKA+VLG  LNIP+ LSLILN CNKK+
Sbjct: 61  LGGVVDVEIGKTSCCPLIQGLADLDAAVCLCTALKANVLGVRLNIPVDLSLILNGCNKKI 110

Query: 121 PNGFHC 127
             GF C
Sbjct: 121 AKGFKC 110

[Close]

BLAST of CsGy5G003990 vs. TrEMBL
Match: tr|A0A1S3ATT0|A0A1S3ATT0_CUCME (lipid transfer protein EARLI 1-like OS=Cucumis melo OX=3656 GN=LOC103482626 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.0e-33
Identity = 82/126 (65.08%), Postives = 93/126 (73.81%), Query Frame = 0


Query: 1   MASKATATLAFLLALNLFFFSLVFAHNDRYVSSNPNHTPIHEDGKKCLKNTLKLGVCAKL 60
           MASKAT +LAFLLALNL F S V+A                ED KKC  +TLKLGVCAKL
Sbjct: 1   MASKATVSLAFLLALNLVFSSFVYA----------------EDDKKCPIDTLKLGVCAKL 60

Query: 61  LGNLVDVTLGKSSCCPLIQGLADLDAAVCLCSALKASVLGSNLNIPLSLSLILNACNKKV 120
           LG +V V +GK+SCCPLIQG+ADLDAAVCLC+ALKA+VLG  LNIP+ LSLILN CNKK+
Sbjct: 61  LGGVVGVEIGKTSCCPLIQGIADLDAAVCLCTALKANVLGVRLNIPVDLSLILNGCNKKI 110

Query: 121 PNGFHC 127
             GF C
Sbjct: 121 VEGFKC 110

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BLAST of CsGy5G003990 vs. TrEMBL
Match: tr|A0A1S3ASV0|A0A1S3ASV0_CUCME (14 kDa proline-rich protein DC2.15-like OS=Cucumis melo OX=3656 GN=LOC103482623 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.3e-33
Identity = 80/136 (58.82%), Postives = 101/136 (74.26%), Query Frame = 0


Query: 1   MASKATATLAFLLALNLFFFSLVFAHNDRYVSSNPNHTPI-------HEDGKKCLKNTLK 60
           MASKAT++LAFLL+LNL FF+LV + ++ YV   P   P          D +KC K+ LK
Sbjct: 1   MASKATSSLAFLLSLNLLFFTLVSSCDNCYVPIPPKPEPYPPTNPNPPSDYRKCPKDALK 60

Query: 61  LGVCAKLLGNLVDVTLGK---SSCCPLIQGLADLDAAVCLCSALKASVLGSNLNIPLSLS 120
           +GVCAKLLG LVD+T+GK   + CC L+QGLADL+AAVCLC+A+KASVLG+ + IPL LS
Sbjct: 61  IGVCAKLLGGLVDLTIGKPPVTPCCTLVQGLADLEAAVCLCTAIKASVLGNKIKIPLHLS 120

Query: 121 LILNACNKKVPNGFHC 127
           L+LN CNK +PNGF C
Sbjct: 121 LLLNVCNKNLPNGFQC 136

The following BLAST results are available for this feature:

BLAST of CsGy5G003990 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN50231.1	1.9e-63	100.00	hypothetical protein Csa_5G161310 [Cucumis sativus]	[more]
XP_008437113.1	1.1e-55	90.48	PREDICTED: pEARLI1-like lipid transfer protein 1 [Cucumis melo]	[more]
XP_011656155.1	2.2e-46	84.68	PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis sativus]	[more]
XP_022154817.1	7.4e-39	70.54	14 kDa proline-rich protein DC2.15-like [Momordica charantia]	[more]
XP_022154816.1	1.3e-38	69.77	14 kDa proline-rich protein DC2.15-like [Momordica charantia]	[more]

BLAST of CsGy5G003990 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G12090.1	1.4e-26	47.79	extensin-like protein	[more]
AT1G62510.1	1.4e-26	46.31	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G12520.1	6.7e-26	49.61	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G12510.1	6.7e-26	49.61	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G12480.1	3.3e-25	39.88	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

BLAST of CsGy5G003990 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q39176\|ERLI1_ARATH	6.0e-24	39.88	Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV...	[more]
sp\|Q9SU35\|ERLL1_ARATH	6.6e-23	40.37	pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE...	[more]
sp\|P14009\|14KD_DAUCA	5.6e-22	41.91	14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1	[more]
sp\|Q9SU34\|ERLL2_ARATH	1.6e-21	59.04	pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g124...	[more]
sp\|Q9SU33\|ERLL3_ARATH	2.8e-21	57.83	pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g125...	[more]

BLAST of CsGy5G003990 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KR80\|A0A0A0KR80_CUCSA	1.3e-63	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G161310 PE=4 SV=1	[more]
tr\|A0A1S3ATT5\|A0A1S3ATT5_CUCME	7.5e-56	90.48	pEARLI1-like lipid transfer protein 1 OS=Cucumis melo OX=3656 GN=LOC103482630 PE...	[more]
tr\|A0A1S3ATC3\|A0A1S3ATC3_CUCME	1.3e-34	66.67	lipid transfer protein EARLI 1-like OS=Cucumis melo OX=3656 GN=LOC103482624 PE=4...	[more]
tr\|A0A1S3ATT0\|A0A1S3ATT0_CUCME	4.0e-33	65.08	lipid transfer protein EARLI 1-like OS=Cucumis melo OX=3656 GN=LOC103482626 PE=4...	[more]
tr\|A0A1S3ASV0\|A0A1S3ASV0_CUCME	5.3e-33	58.82	14 kDa proline-rich protein DC2.15-like OS=Cucumis melo OX=3656 GN=LOC103482623 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036312	Bifun_inhib/LTP/seed_sf
IPR027923	Hydrophob_seed
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G003990.1	CsGy5G003990.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 47..126 e-value: 5.3E-6 score: 35.9
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 45..126 e-value: 2.5E-25 score: 90.0
None	No IPR available	PANTHER	PTHR31731	FAMILY NOT NAMED	coord: 1..126
None	No IPR available	PANTHER	PTHR31731:SF7	SUBFAMILY NOT NAMED	coord: 1..126
IPR027923	Hydrophobic seed protein	PFAM	PF14547	Hydrophob_seed	coord: 46..126 e-value: 1.1E-22 score: 79.9
IPR027923	Hydrophobic seed protein	CDD	cd01958	HPS_like	coord: 44..126 e-value: 6.66333E-24 score: 88.1544
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 50..126

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G003990	Cla005660	Watermelon (97103) v1	cgybwmB348
CsGy5G003990	Cla011569	Watermelon (97103) v1	cgybwmB381
CsGy5G003990	Csa5G161310	Cucumber (Chinese Long) v2	cgybcuB224
CsGy5G003990	MELO3C005544	Melon (DHL92) v3.5.1	cgybmeB298
CsGy5G003990	ClCG10G002870	Watermelon (Charleston Gray)	cgybwcgB326
CsGy5G003990	CSPI05G06650	Wild cucumber (PI 183967)	cgybcpiB226
CsGy5G003990	CmoCh15G011980	Cucurbita moschata (Rifu)	cgybcmoB583
CsGy5G003990	Lsi09G004100	Bottle gourd (USVL1VR-Ls)	cgyblsiB294
CsGy5G003990	MELO3C005543.2	Melon (DHL92) v3.6.1	cgybmedB298
CsGy5G003990	CsaV3_5G004060	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G003990	Cla97C01G004070	Watermelon (97103) v2	cgybwmbB319
CsGy5G003990	Bhi12G000396	Wax gourd	cgybwgoB414

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G003990	Watermelon (97103) v2	cgybwmbB339
CsGy5G003990	Cucumber (Gy14) v2	cgybcgybB090
CsGy5G003990	Cucurbita maxima (Rimu)	cgybcmaB608
CsGy5G003990	Cucurbita maxima (Rimu)	cgybcmaB635
CsGy5G003990	Cucurbita maxima (Rimu)	cgybcmaB640
CsGy5G003990	Cucurbita maxima (Rimu)	cgybcmaB695
CsGy5G003990	Cucurbita moschata (Rifu)	cgybcmoB613
CsGy5G003990	Cucurbita moschata (Rifu)	cgybcmoB619
CsGy5G003990	Cucurbita moschata (Rifu)	cgybcmoB675
CsGy5G003990	Cucurbita pepo (Zucchini)	cgybcpeB597
CsGy5G003990	Cucurbita pepo (Zucchini)	cgybcpeB618
CsGy5G003990	Cucurbita pepo (Zucchini)	cgybcpeB687
CsGy5G003990	Cucurbita pepo (Zucchini)	cgybcpeB702
CsGy5G003990	Cucumber (Chinese Long) v2	cgybcuB211
CsGy5G003990	Bottle gourd (USVL1VR-Ls)	cgyblsiB352
CsGy5G003990	Melon (DHL92) v3.5.1	cgybmeB348
CsGy5G003990	Watermelon (Charleston Gray)	cgybwcgB332
CsGy5G003990	Wild cucumber (PI 183967)	cgybcpiB212
CsGy5G003990	Silver-seed gourd	carcgybB0911