ClCG10G002870 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG10G002870
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein LENGTH=168
Location	CG_Chr10 : 3416721 .. 3417101 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTCTCCAACAAATCCTTTTCACTTGCTCTCTTCTTTTGTCTCAACCTTCTCTTCTCTTCTCTTACCATTGCTCAGCCAGTTGTACCAGCGCCAAGCCCGAGTGGAGGCAATTGCTCGATCGCCAATTCAGGTGCATGTGCAAGAGTACTTGGATTGATTAATGTAGGTGTTAGCAATAGCCAAGACTTAGGTCCATGTTGTAGCTTTGTTCAAGGCCTACTGGACTTTGACGCTGCTGCTTGTATTTGTGCTGTTGCAAAGAGTTCATTTAATGTCTTTGGCATCCGTCTAACGCTACCCGTTAATACCGTGAGCAACATTGCACTTAACAGCTGCAACAGAACTCCTCCTTCTGGATTTAACTGCGTGGCCTAA

mRNA sequence

ATGTCTTTCTCCAACAAATCCTTTTCACTTGCTCTCTTCTTTTGTCTCAACCTTCTCTTCTCTTCTCTTACCATTGCTCAGCCAGTTGTACCAGCGCCAAGCCCGAGTGGAGGCAATTGCTCGATCGCCAATTCAGGTGCATGTGCAAGAGTACTTGGATTGATTAATGTAGGTGTTAGCAATAGCCAAGACTTAGGTCCATGTTGTAGCTTTGTTCAAGGCCTACTGGACTTTGACGCTGCTGCTTGTATTTGTGCTGTTGCAAAGAGTTCATTTAATGTCTTTGGCATCCGTCTAACGCTACCCGTTAATACCGTGAGCAACATTGCACTTAACAGCTGCAACAGAACTCCTCCTTCTGGATTTAACTGCGTGGCCTAA

Coding sequence (CDS)

ATGTCTTTCTCCAACAAATCCTTTTCACTTGCTCTCTTCTTTTGTCTCAACCTTCTCTTCTCTTCTCTTACCATTGCTCAGCCAGTTGTACCAGCGCCAAGCCCGAGTGGAGGCAATTGCTCGATCGCCAATTCAGGTGCATGTGCAAGAGTACTTGGATTGATTAATGTAGGTGTTAGCAATAGCCAAGACTTAGGTCCATGTTGTAGCTTTGTTCAAGGCCTACTGGACTTTGACGCTGCTGCTTGTATTTGTGCTGTTGCAAAGAGTTCATTTAATGTCTTTGGCATCCGTCTAACGCTACCCGTTAATACCGTGAGCAACATTGCACTTAACAGCTGCAACAGAACTCCTCCTTCTGGATTTAACTGCGTGGCCTAA

Protein sequence

MSFSNKSFSLALFFCLNLLFSSLTIAQPVVPAPSPSGGNCSIANSGACARVLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNCVA

Homology

[Close]

BLAST of ClCG10G002870 vs. Swiss-Prot
Match: ERLL1_ARATH (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana GN=AZI1 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.2e-16
Identity = 62/165 (37.58%), Postives = 80/165 (48.48%), Query Frame = 1


Query: 4   SNKSFSLALFFCLNLLFSSLTIA----------------------------QPVVPAPSP 63
           S  S SLALFF LN+LF +LT+A                            +P VP+P+P
Sbjct: 3   SKNSASLALFFALNILFFTLTVATNCNCKPSPKPKPVPSPKPKPVQCPPPPRPSVPSPNP 62

Query: 64  -----------SGGNCSI--ANSGACARVLG-LINV--GVSNSQDLGPCCSFVQGLLDFD 123
                      SG +C I     G CA VL  L+N+  G  +SQ    CCS +QGL+D D
Sbjct: 63  RPVTPPRTPGSSGNSCPIDALKLGVCANVLSSLLNIQLGQPSSQQ---CCSLIQGLVDVD 122

Query: 124 AAACICAVAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC 125
           AA C+C   ++  NV GI L +P++   ++ LN CNR  PSGF C
Sbjct: 123 AAICLCTALRA--NVLGINLNVPISL--SVLLNVCNRKLPSGFQC 160

[Close]

BLAST of ClCG10G002870 vs. Swiss-Prot
Match: ERLI1_ARATH (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana GN=EARLI1 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.5e-16
Identity = 59/170 (34.71%), Postives = 76/170 (44.71%), Query Frame = 1


Query: 4   SNKSFSLALFFCLNLLFSSLTIA------------------------------------Q 63
           S  S S+ALFF LN++F +LT A                                     
Sbjct: 3   SKNSASIALFFALNIIFFTLTAATDCGCNPSPKHKPVPSPKPKPVPSPKPKPVPSPSVPS 62

Query: 64  PVVPAPSP----------SGGNCSI--ANSGACARVL-GLINVGVSNSQDLGPCCSFVQG 123
           P VP+P+P          S GNC I     G CA VL  L+N+ +       PCCS +QG
Sbjct: 63  PSVPSPNPRPVTPPRTPGSSGNCPIDALRLGVCANVLSSLLNIQL-GQPSAQPCCSLIQG 122

Query: 124 LLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC 125
           L+D DAA C+C   ++  NV GI L +P++   ++ LN CNR  PSGF C
Sbjct: 123 LVDLDAAICLCTALRA--NVLGINLNVPISL--SVLLNVCNRKVPSGFQC 167

[Close]

BLAST of ClCG10G002870 vs. Swiss-Prot
Match: 14KD_DAUCA (14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.3e-15
Identity = 50/138 (36.23%), Postives = 69/138 (50.00%), Query Frame = 1


Query: 4   SNKSFSLALFFCLNLLFSSLTIA------------QPV---VPAPSPSGGNC--SIANSG 63
           S  S S+ALFF LN+LF +L  +            +P     P P PS G C       G
Sbjct: 3   SKNSASVALFFTLNILFFALVSSTEKCPDPYKPKPKPTPKPTPTPYPSAGKCPRDALKLG 62

Query: 64  ACARVLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTV 123
            CA VL L++  V  S    PCCS ++GL++ +AA C+C   K+  N+ G  L LP+   
Sbjct: 63  VCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKA--NILGKNLNLPI--A 122

Query: 124 SNIALNSCNRTPPSGFNC 125
            ++ LN+C +  P+GF C
Sbjct: 123 LSLVLNNCGKQVPNGFEC 136

[Close]

BLAST of ClCG10G002870 vs. Swiss-Prot
Match: AIR1L_ARATH (Putative lipid-binding protein AIR1B OS=Arabidopsis thaliana GN=AIR1B PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 8.6e-15
Identity = 50/117 (42.74%), Postives = 65/117 (55.56%), Query Frame = 1


Query: 9   SLALFFCLNLLFSSLTIAQPVVPAPSPSGGNCSIANSGACARVLGLINVGVSNSQDLGPC 68
           SLALF  LNLLF + T         S + G C I  S  CA VL L+++ + N   + PC
Sbjct: 6   SLALFVSLNLLFFTCT---------SATTGTCPIQIS-TCANVLNLVDLTLGNPP-VKPC 65

Query: 69  CSFVQGLLDFDAAACICAVAKSSFNVFGI-RLTLPVNTVSNIALNSCNRTPPSGFNC 125
           CS +QGL D +AAAC+C   K+S  + GI  + LP+N   ++ LN C+R  P GF C
Sbjct: 66  CSLIQGLADLEAAACLCTALKAS--ILGIVNINLPINL--SVLLNVCSRNAPKGFQC 107

[Close]

BLAST of ClCG10G002870 vs. Swiss-Prot
Match: ERLL2_ARATH (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana GN=At4g12490 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-14
Identity = 46/101 (45.54%), Postives = 58/101 (57.43%), Query Frame = 1


Query: 28  PVVPAPSP-SGGNCSI--ANSGACARVL-GLINVGVSNSQDLGPCCSFVQGLLDFDAAAC 87
           PV+P  +P S GNC I     G CA VL GL+NV +       PCCS +QGL+D DAA C
Sbjct: 86  PVIPPRTPGSSGNCPIDALRLGVCANVLSGLLNVQLGQPSPQ-PCCSLIQGLVDLDAAVC 145

Query: 88  ICAVAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC 125
           +C   ++  NV GI L +P++   ++ LN CNR  PS F C
Sbjct: 146 LCTALRA--NVLGINLNVPISL--SVLLNVCNRRLPSNFQC 181

HSP 2 Score: 67.0 bits (162), Expect = 1.7e-10
Identity = 59/183 (32.24%), Postives = 76/183 (41.53%), Query Frame = 1


Query: 4   SNKSFSLALFFCLNLLFSSLT------------------------------IAQPVVPAP 63
           S  S SLALFF LN+LF +LT                              +  P VP P
Sbjct: 3   SKNSASLALFFALNILFFTLTAGTNCRCNPSPKPRPLPNPKVPSPKVPTPSVPSPYVPTP 62

Query: 64  S--------PSGGNCSI--------------ANSGAC---ARVLGLINVGVSN--SQDLG 123
           S        PS  + S+               +SG C   A  LG+    +S   +  LG
Sbjct: 63  SVPSPSVPTPSVPSPSVPSPNPTPVIPPRTPGSSGNCPIDALRLGVCANVLSGLLNVQLG 122

Query: 124 -----PCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSG 125
                PCCS +QGL+D DAA C+C   ++  NV GI L +P++   ++ LN CNR  PS 
Sbjct: 123 QPSPQPCCSLIQGLVDLDAAVCLCTALRA--NVLGINLNVPISL--SVLLNVCNRRLPSN 181

[Close]

BLAST of ClCG10G002870 vs. TrEMBL
Match: A0A0D2QW64_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G199900 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 4.4e-18
Identity = 59/134 (44.03%), Postives = 75/134 (55.97%), Query Frame = 1


Query: 4   SNKSFSLALFFCLNLLFSSLTIAQPVVPAPSP-----------SGGNC--SIANSGACAR 63
           S +S SLALFF LN+LF SL  A    P+P P           + G C       G CA 
Sbjct: 3   SKRSASLALFFALNILFFSLVSACDSCPSPKPRPKPTPFPSPSAKGKCPRDALKLGVCAN 62

Query: 64  VLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIA 123
           VLGL+NV +  S  + PCCS +QGL D +AA C+C   K+  NV GI L +PV+   ++ 
Sbjct: 63  VLGLVNVTIG-SPPVQPCCSLLQGLADLEAAVCLCTAIKA--NVLGINLNVPVSL--SLL 122

Query: 124 LNSCNRTPPSGFNC 125
           LN C+R  PSGF C
Sbjct: 123 LNVCSRKVPSGFQC 131

[Close]

BLAST of ClCG10G002870 vs. TrEMBL
Match: A0A0A0L4B3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G026690 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 7.5e-18
Identity = 54/116 (46.55%), Postives = 73/116 (62.93%), Query Frame = 1


Query: 1   MSFSNKSFSLALFFCLNL-LFSSLTIAQPVVPAPSPSGGNCSIANSGACARVLGLINVGV 60
           MS S+KSFSLALFFCLNL LFSSL IAQP+VP  SP+  NCS  N  ACA V+G I V  
Sbjct: 1   MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPT-TNCS-GNVSACASVIGFITVSA 60

Query: 61  SNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIALNSCN 116
            + + + PCC  +QGL+  +A  C+      + ++  I +   V  + +I +N+CN
Sbjct: 61  GSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVEAMLDILVNTCN 114

[Close]

BLAST of ClCG10G002870 vs. TrEMBL
Match: A0A0D2MRH1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G200400 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.2e-17
Identity = 57/132 (43.18%), Postives = 75/132 (56.82%), Query Frame = 1


Query: 4   SNKSFSLALFFCLNLLFSSLTIAQPVVPAPSPS---------GGNC--SIANSGACARVL 63
           S ++ SLALFF LN+LF SL  A    P+P+P           G C       G CA VL
Sbjct: 3   SKRTASLALFFALNVLFFSLVSACGSCPSPNPKPKPTPCPSPSGKCPQDTLKLGVCAEVL 62

Query: 64  GLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIALN 123
           GL+NV V  S  + PCCS ++GL D +AA C+C   K+  NV GI L +PV+   ++ LN
Sbjct: 63  GLVNVTVG-SPPVQPCCSLLRGLADLEAAVCLCTALKA--NVLGINLNIPVSL--SLLLN 122

Query: 124 SCNRTPPSGFNC 125
            C++  PSGF C
Sbjct: 123 VCSKKVPSGFQC 129

[Close]

BLAST of ClCG10G002870 vs. TrEMBL
Match: A0A0D2RQL8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G199800 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.7e-17
Identity = 56/134 (41.79%), Postives = 75/134 (55.97%), Query Frame = 1


Query: 4   SNKSFSLALFFCLNLLFSSLTIAQPVVPAPSP-----------SGGNCSI--ANSGACAR 63
           S +S S+ALFF LN+LF SL  A    P+P P           + G C I     G CA 
Sbjct: 3   SKRSASVALFFALNILFFSLVSANCSCPSPKPKPNPTPSPTPAAEGKCPINTLKLGVCAE 62

Query: 64  VLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIA 123
           VLGL+NV V  S  + PCC+ ++GL D +AA C+C   K   N+ GI L +PV+   ++ 
Sbjct: 63  VLGLVNVTVG-SPPVQPCCTLLKGLADLEAAVCLCTAIKG--NILGINLNIPVSL--SLL 122

Query: 124 LNSCNRTPPSGFNC 125
           LN C++  PSGF C
Sbjct: 123 LNVCSKKVPSGFQC 131

[Close]

BLAST of ClCG10G002870 vs. TrEMBL
Match: D7M122_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_911650 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.4e-16
Identity = 62/152 (40.79%), Postives = 77/152 (50.66%), Query Frame = 1


Query: 4   SNKSFSLALFFCLNLLFSSLTIAQ--------------------------PVVPAPSPSG 63
           S  S SLALFF LN+LF +LT+A                           P VP PS  G
Sbjct: 3   SKNSASLALFFALNILFFTLTVATDCKCNPSPKHSPRVPTPRVPIPSVPTPSVPTPSTPG 62

Query: 64  G--NCSI--ANSGACARVL-GLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSSF 123
              NC I     G CA VL GL+NV +       PCCS +QGL+D DAA C+C   ++  
Sbjct: 63  SSRNCPIDALRLGVCANVLSGLLNVQLGQPS-AQPCCSLIQGLVDLDAAICLCTALRA-- 122

Query: 124 NVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC 125
           NV GI L +P++   ++ LN CNR  PSGF C
Sbjct: 123 NVLGINLNVPISL--SVLLNVCNRRLPSGFQC 149

[Close]

BLAST of ClCG10G002870 vs. TAIR10
Match: AT4G12470.1 (AT4G12470.1 azelaic acid induced 1)

HSP 1 Score: 87.4 bits (215), Expect = 6.7e-18
Identity = 62/165 (37.58%), Postives = 80/165 (48.48%), Query Frame = 1


Query: 4   SNKSFSLALFFCLNLLFSSLTIA----------------------------QPVVPAPSP 63
           S  S SLALFF LN+LF +LT+A                            +P VP+P+P
Sbjct: 3   SKNSASLALFFALNILFFTLTVATNCNCKPSPKPKPVPSPKPKPVQCPPPPRPSVPSPNP 62

Query: 64  -----------SGGNCSI--ANSGACARVLG-LINV--GVSNSQDLGPCCSFVQGLLDFD 123
                      SG +C I     G CA VL  L+N+  G  +SQ    CCS +QGL+D D
Sbjct: 63  RPVTPPRTPGSSGNSCPIDALKLGVCANVLSSLLNIQLGQPSSQQ---CCSLIQGLVDVD 122

Query: 124 AAACICAVAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC 125
           AA C+C   ++  NV GI L +P++   ++ LN CNR  PSGF C
Sbjct: 123 AAICLCTALRA--NVLGINLNVPISL--SVLLNVCNRKLPSGFQC 160

[Close]

BLAST of ClCG10G002870 vs. TAIR10
Match: AT4G12480.1 (AT4G12480.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 2.6e-17
Identity = 59/170 (34.71%), Postives = 76/170 (44.71%), Query Frame = 1


Query: 4   SNKSFSLALFFCLNLLFSSLTIA------------------------------------Q 63
           S  S S+ALFF LN++F +LT A                                     
Sbjct: 3   SKNSASIALFFALNIIFFTLTAATDCGCNPSPKHKPVPSPKPKPVPSPKPKPVPSPSVPS 62

Query: 64  PVVPAPSP----------SGGNCSI--ANSGACARVL-GLINVGVSNSQDLGPCCSFVQG 123
           P VP+P+P          S GNC I     G CA VL  L+N+ +       PCCS +QG
Sbjct: 63  PSVPSPNPRPVTPPRTPGSSGNCPIDALRLGVCANVLSSLLNIQL-GQPSAQPCCSLIQG 122

Query: 124 LLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC 125
           L+D DAA C+C   ++  NV GI L +P++   ++ LN CNR  PSGF C
Sbjct: 123 LVDLDAAICLCTALRA--NVLGINLNVPISL--SVLLNVCNRKVPSGFQC 167

[Close]

BLAST of ClCG10G002870 vs. TAIR10
Match: AT4G12545.1 (AT4G12545.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 81.3 bits (199), Expect = 4.8e-16
Identity = 50/117 (42.74%), Postives = 65/117 (55.56%), Query Frame = 1


Query: 9   SLALFFCLNLLFSSLTIAQPVVPAPSPSGGNCSIANSGACARVLGLINVGVSNSQDLGPC 68
           SLALF  LNLLF + T         S + G C I  S  CA VL L+++ + N   + PC
Sbjct: 6   SLALFVSLNLLFFTCT---------SATTGTCPIQIS-TCANVLNLVDLTLGNPP-VKPC 65

Query: 69  CSFVQGLLDFDAAACICAVAKSSFNVFGI-RLTLPVNTVSNIALNSCNRTPPSGFNC 125
           CS +QGL D +AAAC+C   K+S  + GI  + LP+N   ++ LN C+R  P GF C
Sbjct: 66  CSLIQGLADLEAAACLCTALKAS--ILGIVNINLPINL--SVLLNVCSRNAPKGFQC 107

[Close]

BLAST of ClCG10G002870 vs. TAIR10
Match: AT4G12490.1 (AT4G12490.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 80.9 bits (198), Expect = 6.3e-16
Identity = 46/101 (45.54%), Postives = 58/101 (57.43%), Query Frame = 1


Query: 28  PVVPAPSP-SGGNCSI--ANSGACARVL-GLINVGVSNSQDLGPCCSFVQGLLDFDAAAC 87
           PV+P  +P S GNC I     G CA VL GL+NV +       PCCS +QGL+D DAA C
Sbjct: 86  PVIPPRTPGSSGNCPIDALRLGVCANVLSGLLNVQLGQPSPQ-PCCSLIQGLVDLDAAVC 145

Query: 88  ICAVAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC 125
           +C   ++  NV GI L +P++   ++ LN CNR  PS F C
Sbjct: 146 LCTALRA--NVLGINLNVPISL--SVLLNVCNRRLPSNFQC 181

HSP 2 Score: 67.0 bits (162), Expect = 9.4e-12
Identity = 59/183 (32.24%), Postives = 76/183 (41.53%), Query Frame = 1


Query: 4   SNKSFSLALFFCLNLLFSSLT------------------------------IAQPVVPAP 63
           S  S SLALFF LN+LF +LT                              +  P VP P
Sbjct: 3   SKNSASLALFFALNILFFTLTAGTNCRCNPSPKPRPLPNPKVPSPKVPTPSVPSPYVPTP 62

Query: 64  S--------PSGGNCSI--------------ANSGAC---ARVLGLINVGVSN--SQDLG 123
           S        PS  + S+               +SG C   A  LG+    +S   +  LG
Sbjct: 63  SVPSPSVPTPSVPSPSVPSPNPTPVIPPRTPGSSGNCPIDALRLGVCANVLSGLLNVQLG 122

Query: 124 -----PCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSG 125
                PCCS +QGL+D DAA C+C   ++  NV GI L +P++   ++ LN CNR  PS 
Sbjct: 123 QPSPQPCCSLIQGLVDLDAAVCLCTALRA--NVLGINLNVPISL--SVLLNVCNRRLPSN 181

[Close]

BLAST of ClCG10G002870 vs. TAIR10
Match: AT4G12500.1 (AT4G12500.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 79.7 bits (195), Expect = 1.4e-15
Identity = 47/114 (41.23%), Postives = 61/114 (53.51%), Query Frame = 1


Query: 24  TIAQPVVPAPSP----------SGGNCSI--ANSGACARVL-GLINVGVSNSQDLGPCCS 83
           ++  P VP+P+P          S GNC I     G CA VL GL+NV +       PCCS
Sbjct: 68  SVPTPSVPSPNPTPVTPPRTPGSSGNCPIDALRLGVCANVLSGLLNVQLGQPS-AQPCCS 127

Query: 84  FVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC 125
            +QGL+D DAA C+C   ++  NV GI L +P++   ++ LN CNR  PS F C
Sbjct: 128 LIQGLVDLDAAICLCTALRA--NVLGINLNVPISL--SVLLNVCNRRLPSDFQC 176

HSP 2 Score: 68.2 bits (165), Expect = 4.2e-12
Identity = 60/178 (33.71%), Postives = 76/178 (42.70%), Query Frame = 1


Query: 4   SNKSFSLALFFCLNLLFSSLTIA---------------QPVVPA--------PSPSGGNC 63
           S  S SLALFF LN+LF +LT A                P VP+        PSPS    
Sbjct: 3   SKNSTSLALFFALNILFFTLTTATDCRCNLSPKPRTVPSPKVPSPKYPSPSIPSPSVPTP 62

Query: 64  SI------------------------ANSGAC---ARVLGLINVGVSN--SQDLG----- 123
           S+                         +SG C   A  LG+    +S   +  LG     
Sbjct: 63  SVPTPSVPTPSVPSPNPTPVTPPRTPGSSGNCPIDALRLGVCANVLSGLLNVQLGQPSAQ 122

Query: 124 PCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIALNSCNRTPPSGFNC 125
           PCCS +QGL+D DAA C+C   ++  NV GI L +P++   ++ LN CNR  PS F C
Sbjct: 123 PCCSLIQGLVDLDAAICLCTALRA--NVLGINLNVPISL--SVLLNVCNRRLPSDFQC 176

[Close]

BLAST of ClCG10G002870 vs. NCBI nr
Match: gi|659096576|ref|XP_008449169.1| (PREDICTED: pEARLI1-like lipid transfer protein 3 [Cucumis melo])

HSP 1 Score: 103.6 bits (257), Expect = 2.6e-19
Identity = 57/120 (47.50%), Postives = 74/120 (61.67%), Query Frame = 1


Query: 1   MSFSNKSFSLALFFCLNLLFSSLTIAQPVVPAPSPS--GGNCSIANSGACARVLGLINVG 60
           MS  NK FSLALF+CL  LFSSL IAQP+VPAPSP+  G NCS+ N   CA VL  +NV 
Sbjct: 1   MSSCNKPFSLALFYCLCFLFSSLAIAQPIVPAPSPTTGGANCSLRNVVLCATVLNYVNVN 60

Query: 61  V-SNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGIR--LTLPVNTVSNIALNSCN 116
           + SN+Q + PCC  ++GL+  +A  CI +      N+ G+R  + L    + NI    CN
Sbjct: 61  IGSNNQAIRPCCDMIRGLVAVEAGMCISSAVDVRVNL-GLRQLINLSTEVILNILEGRCN 119

[Close]

BLAST of ClCG10G002870 vs. NCBI nr
Match: gi|823152218|ref|XP_012475941.1| (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Gossypium raimondii])

HSP 1 Score: 99.0 bits (245), Expect = 6.3e-18
Identity = 59/134 (44.03%), Postives = 75/134 (55.97%), Query Frame = 1


Query: 4   SNKSFSLALFFCLNLLFSSLTIAQPVVPAPSP-----------SGGNC--SIANSGACAR 63
           S +S SLALFF LN+LF SL  A    P+P P           + G C       G CA 
Sbjct: 3   SKRSASLALFFALNILFFSLVSACDSCPSPKPRPKPTPFPSPSAKGKCPRDALKLGVCAN 62

Query: 64  VLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIA 123
           VLGL+NV +  S  + PCCS +QGL D +AA C+C   K+  NV GI L +PV+   ++ 
Sbjct: 63  VLGLVNVTIG-SPPVQPCCSLLQGLADLEAAVCLCTAIKA--NVLGINLNVPVSL--SLL 122

Query: 124 LNSCNRTPPSGFNC 125
           LN C+R  PSGF C
Sbjct: 123 LNVCSRKVPSGFQC 131

[Close]

BLAST of ClCG10G002870 vs. NCBI nr
Match: gi|700200751|gb|KGN55884.1| (hypothetical protein Csa_3G026690 [Cucumis sativus])

HSP 1 Score: 98.2 bits (243), Expect = 1.1e-17
Identity = 54/116 (46.55%), Postives = 73/116 (62.93%), Query Frame = 1


Query: 1   MSFSNKSFSLALFFCLNL-LFSSLTIAQPVVPAPSPSGGNCSIANSGACARVLGLINVGV 60
           MS S+KSFSLALFFCLNL LFSSL IAQP+VP  SP+  NCS  N  ACA V+G I V  
Sbjct: 1   MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPT-TNCS-GNVSACASVIGFITVSA 60

Query: 61  SNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIALNSCN 116
            + + + PCC  +QGL+  +A  C+      + ++  I +   V  + +I +N+CN
Sbjct: 61  GSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVEAMLDILVNTCN 114

[Close]

BLAST of ClCG10G002870 vs. NCBI nr
Match: gi|823152225|ref|XP_012475944.1| (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Gossypium raimondii])

HSP 1 Score: 96.7 bits (239), Expect = 3.1e-17
Identity = 57/132 (43.18%), Postives = 75/132 (56.82%), Query Frame = 1


Query: 4   SNKSFSLALFFCLNLLFSSLTIAQPVVPAPSPS---------GGNC--SIANSGACARVL 63
           S ++ SLALFF LN+LF SL  A    P+P+P           G C       G CA VL
Sbjct: 3   SKRTASLALFFALNVLFFSLVSACGSCPSPNPKPKPTPCPSPSGKCPQDTLKLGVCAEVL 62

Query: 64  GLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIALN 123
           GL+NV V  S  + PCCS ++GL D +AA C+C   K+  NV GI L +PV+   ++ LN
Sbjct: 63  GLVNVTVG-SPPVQPCCSLLRGLADLEAAVCLCTALKA--NVLGINLNIPVSL--SLLLN 122

Query: 124 SCNRTPPSGFNC 125
            C++  PSGF C
Sbjct: 123 VCSKKVPSGFQC 129

[Close]

BLAST of ClCG10G002870 vs. NCBI nr
Match: gi|823152214|ref|XP_012475939.1| (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Gossypium raimondii])

HSP 1 Score: 95.9 bits (237), Expect = 5.4e-17
Identity = 56/134 (41.79%), Postives = 75/134 (55.97%), Query Frame = 1


Query: 4   SNKSFSLALFFCLNLLFSSLTIAQPVVPAPSP-----------SGGNCSI--ANSGACAR 63
           S +S S+ALFF LN+LF SL  A    P+P P           + G C I     G CA 
Sbjct: 3   SKRSASVALFFALNILFFSLVSANCSCPSPKPKPNPTPSPTPAAEGKCPINTLKLGVCAE 62

Query: 64  VLGLINVGVSNSQDLGPCCSFVQGLLDFDAAACICAVAKSSFNVFGIRLTLPVNTVSNIA 123
           VLGL+NV V  S  + PCC+ ++GL D +AA C+C   K   N+ GI L +PV+   ++ 
Sbjct: 63  VLGLVNVTVG-SPPVQPCCTLLKGLADLEAAVCLCTAIKG--NILGINLNIPVSL--SLL 122

Query: 124 LNSCNRTPPSGFNC 125
           LN C++  PSGF C
Sbjct: 123 LNVCSKKVPSGFQC 131

The following BLAST results are available for this feature:

BLAST of ClCG10G002870 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERLL1_ARATH	1.2e-16	37.58	pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana GN=AZI1 PE=1 SV=1	[more]
ERLI1_ARATH	4.5e-16	34.71	Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana GN=EARLI1 PE=1 SV=1	[more]
14KD_DAUCA	2.3e-15	36.23	14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1	[more]
AIR1L_ARATH	8.6e-15	42.74	Putative lipid-binding protein AIR1B OS=Arabidopsis thaliana GN=AIR1B PE=3 SV=1	[more]
ERLL2_ARATH	1.1e-14	45.54	pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana GN=At4g12490 PE=2 ...	[more]

BLAST of ClCG10G002870 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0D2QW64_GOSRA	4.4e-18	44.03	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G199900 PE=4 SV=1	[more]
A0A0A0L4B3_CUCSA	7.5e-18	46.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G026690 PE=4 SV=1	[more]
A0A0D2MRH1_GOSRA	2.2e-17	43.18	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G200400 PE=4 SV=1	[more]
A0A0D2RQL8_GOSRA	3.7e-17	41.79	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G199800 PE=4 SV=1	[more]
D7M122_ARALL	2.4e-16	40.79	Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA...	[more]

BLAST of ClCG10G002870 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G12470.1	6.7e-18	37.58	azelaic acid induced 1	[more]
AT4G12480.1	2.6e-17	34.71	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT4G12545.1	4.8e-16	42.74	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT4G12490.1	6.3e-16	45.54	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT4G12500.1	1.4e-15	41.23	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]

BLAST of ClCG10G002870 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659096576\|ref\|XP_008449169.1\|	2.6e-19	47.50	PREDICTED: pEARLI1-like lipid transfer protein 3 [Cucumis melo]	[more]
gi\|823152218\|ref\|XP_012475941.1\|	6.3e-18	44.03	PREDICTED: 14 kDa proline-rich protein DC2.15-like [Gossypium raimondii]	[more]
gi\|700200751\|gb\|KGN55884.1\|	1.1e-17	46.55	hypothetical protein Csa_3G026690 [Cucumis sativus]	[more]
gi\|823152225\|ref\|XP_012475944.1\|	3.1e-17	43.18	PREDICTED: 14 kDa proline-rich protein DC2.15-like [Gossypium raimondii]	[more]
gi\|823152214\|ref\|XP_012475939.1\|	5.4e-17	41.79	PREDICTED: 14 kDa proline-rich protein DC2.15-like [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016140	Bifunc_inhib/LTP/seed_store
IPR027923	Hydrophob_seed

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009682	induced systemic resistance
biological_process	GO:0009626	plant-type hypersensitive response
biological_process	GO:0006869	lipid transport
biological_process	GO:0009627	systemic acquired resistance
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0009631	cold acclimation
biological_process	GO:0070417	cellular response to cold
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0048046	apoplast
cellular_component	GO:0005618	cell wall
cellular_component	GO:0009707	chloroplast outer membrane
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008289	lipid binding
molecular_function	GO:0043621	protein self-association

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G002870.1	ClCG10G002870.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 46..124 score: 3.4
IPR027923	Hydrophobic seed protein	PFAM	PF14547	Hydrophob_seed	coord: 44..124 score: 3.8
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 45..124 score: 7.3
None	No IPR available	PANTHER	PTHR31731	FAMILY NOT NAMED	coord: 9..124 score: 4.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG10G002870	Csa3G026690	Cucumber (Chinese Long) v2	cuwcgB189
ClCG10G002870	MELO3C013956	Melon (DHL92) v3.5.1	mewcgB415
ClCG10G002870	MELO3C005544	Melon (DHL92) v3.5.1	mewcgB005
ClCG10G002870	Cla005660	Watermelon (97103) v1	wcgwmB053
ClCG10G002870	Cla97C01G004070	Watermelon (97103) v2	wcgwmbB036
ClCG10G002870	Bhi11G000181	Wax gourd	wcgwgoB084
ClCG10G002870	Bhi12G000395	Wax gourd	wcgwgoB109
ClCG10G002870	CSPI03G02840	Wild cucumber (PI 183967)	cpiwcgB190
ClCG10G002870	CSPI05G06660	Wild cucumber (PI 183967)	cpiwcgB368
ClCG10G002870	Cucsa.301930	Cucumber (Gy14) v1	cgywcgB519
ClCG10G002870	Cucsa.320780	Cucumber (Gy14) v1	cgywcgB556
ClCG10G002870	CmaCh15G011320	Cucurbita maxima (Rimu)	cmawcgB246
ClCG10G002870	CmoCh06G007930	Cucurbita moschata (Rifu)	cmowcgB730
ClCG10G002870	CmoCh02G015880	Cucurbita moschata (Rifu)	cmowcgB512
ClCG10G002870	CmoCh15G011970	Cucurbita moschata (Rifu)	cmowcgB235
ClCG10G002870	Lsi09G004100	Bottle gourd (USVL1VR-Ls)	lsiwcgB007
ClCG10G002870	Lsi07G013140	Bottle gourd (USVL1VR-Ls)	lsiwcgB389
ClCG10G002870	Cp4.1LG14g08790	Cucurbita pepo (Zucchini)	cpewcgB194
ClCG10G002870	CsGy3G002800	Cucumber (Gy14) v2	cgybwcgB174
ClCG10G002870	CsGy5G003990	Cucumber (Gy14) v2	cgybwcgB326
ClCG10G002870	MELO3C013954.2	Melon (DHL92) v3.6.1	medwcgB401
ClCG10G002870	MELO3C005542.2	Melon (DHL92) v3.6.1	medwcgB004
ClCG10G002870	CsaV3_3G002880	Cucumber (Chinese Long) v3	cucwcgB194
ClCG10G002870	CsaV3_5G004080	Cucumber (Chinese Long) v3	cucwcgB374

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG10G002870	Silver-seed gourd	carwcgB0513
ClCG10G002870	Watermelon (97103) v2	wcgwmbB038
ClCG10G002870	Watermelon (Charleston Gray)	wcgwcgB041
ClCG10G002870	Cucurbita maxima (Rimu)	cmawcgB727
ClCG10G002870	Cucumber (Chinese Long) v2	cuwcgB351
ClCG10G002870	Watermelon (97103) v1	wcgwmB071
ClCG10G002870	Cucurbita pepo (Zucchini)	cpewcgB766