CsGy5G001660 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACACCAAGTTTCAATAATTTTTAATATGTACACAAATATTCCCACTAAGTCATAGCAATACAATTATTGTAATCAAACATACAATAAATAAATAAATGAAAGGAATAATAATTTTGAATAAAGAATTTTTTTTAAAAAAAAAACTCTCTCTCTCTCTTGTTGTGTGTGAGGAAATAATAAAAGAAGGGTTTGTGAAGAATTGATGGGGGAGAAGTTCCACATGAAGCCATCTGAAATAAAAGAAAAGAAAAGAAAAAGAAAAGAAAACATTCTTCTTTTCAGCTTTTGATAATCTCATCACCACTTTCAAGGTTACAACTTTACTCTTTTTCTAACAAAACCCTTCAAAATTTTCATATTTTTCTTCATTAATTTCCATGGATACTGCTCAATGGCCACAGGTAATTTCACTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCTTTCTGTTTTCCTTAATTTTTTAGAAATTTTCTTTATGGTTTTTCTTTTTTTGAATTTCTATGTTTTTTTTTGGGGTTCACTTTGTTTGATCTCTCCACTTCTCCCAAAATATTCAGTGACAAAACTGATACTTTCTTCAGGACATTTTGGCATTTGTCCTTTCTCTTTATTTTGTGTTAAAAAGAAAAAAAGGGTTTTCAGTTCCTTTTTCTTTCTTTCTTTTTCTTTTGTGTGTGTGTATATATATATATATATATATGGATGAGATAACCTTGAAAACTGTTATAAAGCAGCTTTTAATTTAGTTGAATTTGTTGTTTTGTTATATATGTCTGTCTTTCTTCCACTTTAGAATATAATTCATTCATTTTTGTTTTCTCTTTTTCCTTTCTTTTATACCCTTCACAAATTCCGTTCACTCGTTCATTAATATGATCTCTTGATCTTTTTATTGTTTGTATGTGTAAATTATGTTGTTTTTTTTTTTAGGAGATTGTGGTGAAGCCAATTGAAGAAATTGTGACAAACACATGTCCAAAACCAAGTGTTTCAATTTTAGAGAGAAAAATTAGACCACAGAAGGAACAAGCTTTGAATTGTCCAAGGTGTAATTCAAGCAATACAAAGTTTTGTTATTACAATAATTATAGTCTCACACAACCAAGATACTTTTGCAAAACTTGCAGAAGGTATTGGACTGAAGGTGGATCTTTAAGAAACATTCCTGTTGGTGGAGGCTCAAGAAAAAACAAAAGACCTTCTTCTAATTCTTCATCATCTACATCTCCCACACCACCTAATTCTTCTTCTCAATCTCAACCTAATTTCCCCAAGAAAATTCTTGATCATCAGCTCCCTCAAAACCCTAAAATCACCCCCTCCCAAGATCTCAACTTGTTTTTTCCACCCTCAAACAATCAAGATCATCATCGTTTCACCACTACTAACAACAACCTCTCCGAAATGATTCTTGTTGGTAGTAACCCTTCCATTAATAATGCCACCTCTTCCTCCGCTTCTGCGACCACGACAATGTCGTCACCACCCCCATCGCAACCTTCGGTGATGGAGCTTCTCACCGGGATGGCGAACAACAACAACAACAACTCTAGTAGGGGTTTGAATTGTTTCGTTCCGATGTCGTCAGTTGTTGTCCCTGATCCTAGCTCTGTTTACACGGGAGGGTTTCCTGATCTTCATGATCAATTCAAACCAAGCCTTGGATTCTCTCTCGACGGATATGGTGTCGTCTCAACCGAGGCAGGTAATGGTGCAGGGAGGCTTATGCAGCTGCCATTTGAGGATTTGAAGCAAGTGTCTAATGGAGTTGAACAAGGGAAAGATCAGCAAGGAGATGATCATAATTCAAATGGGTATTGGAGTGGAATGTTGGGTGGAGGATCATGGTAAATTCTAGGGTTAATTAAATTATATCATTATTAACATTTTGGATCTTTAAATCCTTTTTATTCTTGTCTCCAAATTGATTTTCTTCATCAATTTCAGTCATTTAACTGATTTTTTCCAACCCATTTGCTTTTTTTTTATTGGGTTTAAGATTTCATTGACAAAAATGATGAACTTGAAAAACATATAATCAGTTCAATGACTGAATTGATGAACAAAAACAATTTAGAAACAAGAACTAAATTCTAGTGATCAGTACAACACTTAGAACCCTCTTTATTTTTGAACCCTAGTTTATTAATTAGATTATATATATCAATATAACTTTTTAAATTTCACTAAATTTAATTTCTCTCTTTGTATTAGCTAGCTTTCTTTCAAGTCCTTTTTCACATTACTAATTAATATATAGTTTATTATACTAATCTCTCTTTTTGTGACATTATATATTATATATATATTGAGACTATATATTATAGTTTCTTCATCTCTACATCTTCACACATACATATGAATAATAATATATAATTGTATCTTATTGGGTAAAACTTTCCTATTTGAATTGTGTCAATTTGTTATTCAATTTTGGAGTCAGCTGCTAAAAGAAAAAGCTCTGAAATCTTTCCACATGTTGAGTTCTCCATTTCCTTTATTTCCTTTTCCTTTTGTCTAAGTGAAATGTTTACAAATGCATTCTGACAAACCAAAGACCTAACTTTTTTTTTTTTTTTTTT ACACCAAGTTTCAATAATTTTTAATATGTACACAAATATTCCCACTAAGTCATAGCAATACAATTATTGTAATCAAACATACAATAAATAAATAAATGAAAGGAATAATAATTTTGAATAAAGAATTTTTTTTAAAAAAAAAACTCTCTCTCTCTCTTGTTGTGTGTGAGGAAATAATAAAAGAAGGGTTTGTGAAGAATTGATGGGGGAGAAGTTCCACATGAAGCCATCTGAAATAAAAGAAAAGAAAAGAAAAAGAAAAGAAAACATTCTTCTTTTCAGCTTTTGATAATCTCATCACCACTTTCAAGGTTACAACTTTACTCTTTTTCTAACAAAACCCTTCAAAATTTTCATATTTTTCTTCATTAATTTCCATGGATACTGCTCAATGGCCACAGGAGATTGTGGTGAAGCCAATTGAAGAAATTGTGACAAACACATGTCCAAAACCAAGTGTTTCAATTTTAGAGAGAAAAATTAGACCACAGAAGGAACAAGCTTTGAATTGTCCAAGGTGTAATTCAAGCAATACAAAGTTTTGTTATTACAATAATTATAGTCTCACACAACCAAGATACTTTTGCAAAACTTGCAGAAGGTATTGGACTGAAGGTGGATCTTTAAGAAACATTCCTGTTGGTGGAGGCTCAAGAAAAAACAAAAGACCTTCTTCTAATTCTTCATCATCTACATCTCCCACACCACCTAATTCTTCTTCTCAATCTCAACCTAATTTCCCCAAGAAAATTCTTGATCATCAGCTCCCTCAAAACCCTAAAATCACCCCCTCCCAAGATCTCAACTTGTTTTTTCCACCCTCAAACAATCAAGATCATCATCGTTTCACCACTACTAACAACAACCTCTCCGAAATGATTCTTGTTGGTAGTAACCCTTCCATTAATAATGCCACCTCTTCCTCCGCTTCTGCGACCACGACAATGTCGTCACCACCCCCATCGCAACCTTCGGTGATGGAGCTTCTCACCGGGATGGCGAACAACAACAACAACAACTCTAGTAGGGGTTTGAATTGTTTCGTTCCGATGTCGTCAGTTGTTGTCCCTGATCCTAGCTCTGTTTACACGGGAGGGTTTCCTGATCTTCATGATCAATTCAAACCAAGCCTTGGATTCTCTCTCGACGGATATGGTGTCGTCTCAACCGAGGCAGGTAATGGTGCAGGGAGGCTTATGCAGCTGCCATTTGAGGATTTGAAGCAAGTGTCTAATGGAGTTGAACAAGGGAAAGATCAGCAAGGAGATGATCATAATTCAAATGGGTATTGGAGTGGAATGTTGGGTGGAGGATCATGGTAAATTCTAGGGTTAATTAAATTATATCATTATTAACATTTTGGATCTTTAAATCCTTTTTATTCTTGTCTCCAAATTGATTTTCTTCATCAATTTCAGTCATTTAACTGATTTTTTCCAACCCATTTGCTTTTTTTTTATTGGGTTTAAGATTTCATTGACAAAAATGATGAACTTGAAAAACATATAATCAGTTCAATGACTGAATTGATGAACAAAAACAATTTAGAAACAAGAACTAAATTCTAGTGATCAGTACAACACTTAGAACCCTCTTTATTTTTGAACCCTAGTTTATTAATTAGATTATATATATCAATATAACTTTTTAAATTTCACTAAATTTAATTTCTCTCTTTGTATTAGCTAGCTTTCTTTCAAGTCCTTTTTCACATTACTAATTAATATATAGTTTATTATACTAATCTCTCTTTTTGTGACATTATATATTATATATATATTGAGACTATATATTATAGTTTCTTCATCTCTACATCTTCACACATACATATGAATAATAATATATAATTGTATCTTATTGGGTAAAACTTTCCTATTTGAATTGTGTCAATTTGTTATTCAATTTTGGAGTCAGCTGCTAAAAGAAAAAGCTCTGAAATCTTTCCACATGTTGAGTTCTCCATTTCCTTTATTTCCTTTTCCTTTTGTCTAAGTGAAATGTTTACAAATGCATTCTGACAAACCAAAGACCTAACTTTTTTTTTTTTTTTTTT ATGGATACTGCTCAATGGCCACAGGAGATTGTGGTGAAGCCAATTGAAGAAATTGTGACAAACACATGTCCAAAACCAAGTGTTTCAATTTTAGAGAGAAAAATTAGACCACAGAAGGAACAAGCTTTGAATTGTCCAAGGTGTAATTCAAGCAATACAAAGTTTTGTTATTACAATAATTATAGTCTCACACAACCAAGATACTTTTGCAAAACTTGCAGAAGGTATTGGACTGAAGGTGGATCTTTAAGAAACATTCCTGTTGGTGGAGGCTCAAGAAAAAACAAAAGACCTTCTTCTAATTCTTCATCATCTACATCTCCCACACCACCTAATTCTTCTTCTCAATCTCAACCTAATTTCCCCAAGAAAATTCTTGATCATCAGCTCCCTCAAAACCCTAAAATCACCCCCTCCCAAGATCTCAACTTGTTTTTTCCACCCTCAAACAATCAAGATCATCATCGTTTCACCACTACTAACAACAACCTCTCCGAAATGATTCTTGTTGGTAGTAACCCTTCCATTAATAATGCCACCTCTTCCTCCGCTTCTGCGACCACGACAATGTCGTCACCACCCCCATCGCAACCTTCGGTGATGGAGCTTCTCACCGGGATGGCGAACAACAACAACAACAACTCTAGTAGGGGTTTGAATTGTTTCGTTCCGATGTCGTCAGTTGTTGTCCCTGATCCTAGCTCTGTTTACACGGGAGGGTTTCCTGATCTTCATGATCAATTCAAACCAAGCCTTGGATTCTCTCTCGACGGATATGGTGTCGTCTCAACCGAGGCAGGTAATGGTGCAGGGAGGCTTATGCAGCTGCCATTTGAGGATTTGAAGCAAGTGTCTAATGGAGTTGAACAAGGGAAAGATCAGCAAGGAGATGATCATAATTCAAATGGGTATTGGAGTGGAATGTTGGGTGGAGGATCATGGTAA MDTAQWPQEIVVKPIEEIVTNTCPKPSVSILERKIRPQKEQALNCPRCNSSNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSNSSSSTSPTPPNSSSQSQPNFPKKILDHQLPQNPKITPSQDLNLFFPPSNNQDHHRFTTTNNNLSEMILVGSNPSINNATSSSASATTTMSSPPPSQPSVMELLTGMANNNNNNSSRGLNCFVPMSSVVVPDPSSVYTGGFPDLHDQFKPSLGFSLDGYGVVSTEAGNGAGRLMQLPFEDLKQVSNGVEQGKDQQGDDHNSNGYWSGMLGGGSW
BLAST of CsGy5G001660 vs. NCBI nr
Match: XP_004143850.1 (PREDICTED: dof zinc finger protein DOF4.6-like [Cucumis sativus] >KGN49995.1 hypothetical protein Csa_5G148660 [Cucumis sativus]) HSP 1 Score: 416.0 bits (1068), Expect = 1.1e-112 Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0
BLAST of CsGy5G001660 vs. NCBI nr
Match: XP_008437432.1 (PREDICTED: dof zinc finger protein DOF4.6-like [Cucumis melo]) HSP 1 Score: 383.3 bits (983), Expect = 8.2e-103 Identity = 301/316 (95.25%), Postives = 305/316 (96.52%), Query Frame = 0
BLAST of CsGy5G001660 vs. NCBI nr
Match: XP_022996260.1 (dof zinc finger protein DOF4.6-like [Cucurbita maxima]) HSP 1 Score: 301.2 bits (770), Expect = 4.1e-78 Identity = 201/317 (63.41%), Postives = 214/317 (67.51%), Query Frame = 0
BLAST of CsGy5G001660 vs. NCBI nr
Match: XP_022957649.1 (dof zinc finger protein DOF4.6-like [Cucurbita moschata]) HSP 1 Score: 299.7 bits (766), Expect = 1.2e-77 Identity = 203/319 (63.64%), Postives = 214/319 (67.08%), Query Frame = 0
BLAST of CsGy5G001660 vs. NCBI nr
Match: XP_023534480.1 (dof zinc finger protein DOF4.6-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 292.4 bits (747), Expect = 1.9e-75 Identity = 197/322 (61.18%), Postives = 209/322 (64.91%), Query Frame = 0
BLAST of CsGy5G001660 vs. TAIR10
Match: AT4G24060.1 (Dof-type zinc finger DNA-binding family protein) HSP 1 Score: 167.5 bits (423), Expect = 1.3e-41 Identity = 78/99 (78.79%), Postives = 83/99 (83.84%), Query Frame = 0
BLAST of CsGy5G001660 vs. TAIR10
Match: AT1G64620.1 (Dof-type zinc finger DNA-binding family protein) HSP 1 Score: 156.4 bits (394), Expect = 2.9e-38 Identity = 73/96 (76.04%), Postives = 79/96 (82.29%), Query Frame = 0
BLAST of CsGy5G001660 vs. TAIR10
Match: AT2G46590.2 (Dof-type zinc finger DNA-binding family protein) HSP 1 Score: 116.3 bits (290), Expect = 3.4e-26 Identity = 51/59 (86.44%), Postives = 55/59 (93.22%), Query Frame = 0
BLAST of CsGy5G001660 vs. TAIR10
Match: AT3G61850.4 (Dof-type zinc finger DNA-binding family protein) HSP 1 Score: 116.3 bits (290), Expect = 3.4e-26 Identity = 133/366 (36.34%), Postives = 170/366 (46.45%), Query Frame = 0
BLAST of CsGy5G001660 vs. TAIR10
Match: AT3G55370.3 (OBF-binding protein 3) HSP 1 Score: 109.0 bits (271), Expect = 5.4e-24 Identity = 45/54 (83.33%), Postives = 50/54 (92.59%), Query Frame = 0
BLAST of CsGy5G001660 vs. Swiss-Prot
Match: sp|Q8LAP8|DOF46_ARATH (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV=2) HSP 1 Score: 167.5 bits (423), Expect = 2.3e-40 Identity = 78/99 (78.79%), Postives = 83/99 (83.84%), Query Frame = 0
BLAST of CsGy5G001660 vs. Swiss-Prot
Match: sp|Q84JQ8|DOF18_ARATH (Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 5.3e-37 Identity = 73/96 (76.04%), Postives = 79/96 (82.29%), Query Frame = 0
BLAST of CsGy5G001660 vs. Swiss-Prot
Match: sp|Q9SXG8|DOF1_ORYSJ (Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.4e-26 Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of CsGy5G001660 vs. Swiss-Prot
Match: sp|Q9ZPY0|DOF25_ARATH (Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana OX=3702 GN=DOF2.5 PE=2 SV=3) HSP 1 Score: 116.3 bits (290), Expect = 6.1e-25 Identity = 51/59 (86.44%), Postives = 55/59 (93.22%), Query Frame = 0
BLAST of CsGy5G001660 vs. Swiss-Prot
Match: sp|Q43385|DOF37_ARATH (Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV=2) HSP 1 Score: 116.3 bits (290), Expect = 6.1e-25 Identity = 107/366 (29.23%), Postives = 144/366 (39.34%), Query Frame = 0
BLAST of CsGy5G001660 vs. TrEMBL
Match: tr|A0A0A0KK04|A0A0A0KK04_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148660 PE=4 SV=1) HSP 1 Score: 416.0 bits (1068), Expect = 7.5e-113 Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0
BLAST of CsGy5G001660 vs. TrEMBL
Match: tr|A0A1S3AUK1|A0A1S3AUK1_CUCME (dof zinc finger protein DOF4.6-like OS=Cucumis melo OX=3656 GN=LOC103482848 PE=4 SV=1) HSP 1 Score: 383.3 bits (983), Expect = 5.4e-103 Identity = 301/316 (95.25%), Postives = 305/316 (96.52%), Query Frame = 0
BLAST of CsGy5G001660 vs. TrEMBL
Match: tr|A0A2P4J681|A0A2P4J681_QUESU (Dof zinc finger protein dof4.6 OS=Quercus suber OX=58331 GN=CFP56_48872 PE=4 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 1.3e-59 Identity = 201/322 (62.42%), Postives = 213/322 (66.15%), Query Frame = 0
BLAST of CsGy5G001660 vs. TrEMBL
Match: tr|A0A2I4EYA5|A0A2I4EYA5_9ROSI (dof zinc finger protein DOF4.6-like OS=Juglans regia OX=51240 GN=LOC108993804 PE=4 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 1.8e-58 Identity = 183/319 (57.37%), Postives = 199/319 (62.38%), Query Frame = 0
BLAST of CsGy5G001660 vs. TrEMBL
Match: tr|A0A061G2Y5|A0A061G2Y5_THECC (F-box family protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_015683 PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 3.1e-58 Identity = 177/324 (54.63%), Postives = 192/324 (59.26%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|