CmaCh02G009320 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh02G009320
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionDof zinc finger protein
LocationCma_Chr02 : 5549568 .. 5551332 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCCCTTTGAGTGTTTGAGCAGATAAAAGAAGGGTTAGCAATTCATAGGCAGAACTTCCACATGAACCATCTGGAAACATTCTTTTTTCCAGCTTTTCTTCACCACTTTCAAGGTTCATCACCTCACTTCACTTTTCTCCCTCTAAACCCATAAAAAAAAGAAACAAAAATTCCTTCAATTCTATGGATACTGCTCAATGGCCTCAGGTAATTTTGTTGTTGTTGTTGTTCTTGTTCTTCATGATCTGTTCTGAAAGTTTGAAACTTTTGTTTGTGGGGTTTGGTTTTTAGGCATGGCCATGAAGAACAAAACAAAAGAACACTACTTTTTTTTTGCTTTTTGAATTTGGGTTTCCCTTTGTTTGATCTCCACTTCCCCCGAAGTATTCAGTGACAAAATTGATACTTTCTTCAAACCATTTTGGCTGTTTCTCCTTTCTCTTTAATTTAATTTTTGTCAAAAGGAAAAGGGTTATAAAGCATAAAGCAATCAGCTTTGTTTTGTTATGTCTGTCAAATTTACCATCTTTTGTTGTTTTGATCTTCTTTTTAGGAGATTGCGTTGAAACCCAATGAAGAAATTGTGGCAAACACTTGCCCAAAACCAAGTGGTGTATCTGTTCTTGAGAGGAAAATTAGACCACAAAAGGAACAAGCTTTGAATTGTCCGAGGTGCAATTCCACCAATACTAAGTTTTGTTATTACAATAATTATAGCCTCACACAACCAAGATACTTTTGCAAAACATGTCGAAGGTATTGGACTGAAGGTGGTTCCTTAAGAAACATTCCTGTCGGAGGTGGCTCAAGGAAGAACAAAAGGCCTTCTTCTTCTTCTACTTCTTCTAATTCTTCTTCTTCTTCTACTTTATCCACATCTCCCACTTGTTCTAATCTTCCTCCAAAGAAGCCTCTTCATCTCCCTCAAACCCCTAAAACCACTCCTTCCCAAGATCTCAATTTGTCCTTTCCATCGTCGAATCAGCTTTCGGCGATGGAGCTTCTCACCGGGATGGCGAGCAACTCTAAGGGTTTAAATTGTTTCATTCCAATGCCATCTATTATCCCTGATCCTGCCTCCGTTTACGCATCCGGGTTTCCTGATCTCCATGACCAATTCAAGCCAAGCCTCGGATTCTCTCTCGATGGATATGGCGTTGTCCCCGGTGAGGCTAGCAATGGCGGCGGAGGGAGGGTTATGCAGCTGCCATTTGAGGATTTGAAGCAAGGGGCTAATGGAGTTGAGGAAGGGAAAGAGCATGGAGATTCAAGTGGGTATTGGAGTGGGATGTTGGGTGGAGGATCATGGTAAATTCTAGGGCTAATTACTCTTATAGTTCACATTTTGGATCTTTATATCTTTTCTATTCTTAGTCTCCAAATTGGTTTTCTCCCTCAATTCCAGTCATTAAACTCATTTTTTTTTATTATTATTAAACCGTCTTTTTATCTTGTTCTTTTATCTTGTTCAATGACAGGATTGACGTATAAAAACAATTTAGAAATGAGAACAAGAATTTTAGTACAACATATGAACCGTCCTTTTCTTGTCGATCTTAGTTTATATTGATTTCTTGATCGATGATATATGTCATTCTTGATCGGCTAAACTTTGTTCTATGATTTTGTAAATTTATGGTAATTGTATGAATTAGAACTATACTATTAAATTTTAATGAAAGAAAATAATGTTCTCAAAATAGACAAGCATGGTACTTGAAATTAAGGGACA

mRNA sequence

CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCCCTTTGAGTGTTTGAGCAGATAAAAGAAGGGTTAGCAATTCATAGGCAGAACTTCCACATGAACCATCTGGAAACATTCTTTTTTCCAGCTTTTCTTCACCACTTTCAAGGTTCATCACCTCACTTCACTTTTCTCCCTCTAAACCCATAAAAAAAAGAAACAAAAATTCCTTCAATTCTATGGATACTGCTCAATGGCCTCAGGAGATTGCGTTGAAACCCAATGAAGAAATTGTGGCAAACACTTGCCCAAAACCAAGTGGTGTATCTGTTCTTGAGAGGAAAATTAGACCACAAAAGGAACAAGCTTTGAATTGTCCGAGGTGCAATTCCACCAATACTAAGTTTTGTTATTACAATAATTATAGCCTCACACAACCAAGATACTTTTGCAAAACATGTCGAAGGTATTGGACTGAAGGTGGTTCCTTAAGAAACATTCCTGTCGGAGGTGGCTCAAGGAAGAACAAAAGGCCTTCTTCTTCTTCTACTTCTTCTAATTCTTCTTCTTCTTCTACTTTATCCACATCTCCCACTTGTTCTAATCTTCCTCCAAAGAAGCCTCTTCATCTCCCTCAAACCCCTAAAACCACTCCTTCCCAAGATCTCAATTTGTCCTTTCCATCGTCGAATCAGCTTTCGGCGATGGAGCTTCTCACCGGGATGGCGAGCAACTCTAAGGGTTTAAATTGTTTCATTCCAATGCCATCTATTATCCCTGATCCTGCCTCCGTTTACGCATCCGGGTTTCCTGATCTCCATGACCAATTCAAGCCAAGCCTCGGATTCTCTCTCGATGGATATGGCGTTGTCCCCGGTGAGGCTAGCAATGGCGGCGGAGGGAGGGTTATGCAGCTGCCATTTGAGGATTTGAAGCAAGGGGCTAATGGAGTTGAGGAAGGGAAAGAGCATGGAGATTCAAGTGGGTATTGGAGTGGGATGTTGGGTGGAGGATCATGGTAAATTCTAGGGCTAATTACTCTTATAGTTCACATTTTGGATCTTTATATCTTTTCTATTCTTAGTCTCCAAATTGGTTTTCTCCCTCAATTCCAGTCATTAAACTCATTTTTTTTTATTATTATTAAACCGTCTTTTTATCTTGTTCTTTTATCTTGTTCAATGACAGGATTGACGTATAAAAACAATTTAGAAATGAGAACAAGAATTTTAGTACAACATATGAACCGTCCTTTTCTTGTCGATCTTAGTTTATATTGATTTCTTGATCGATGATATATGTCATTCTTGATCGGCTAAACTTTGTTCTATGATTTTGTAAATTTATGGTAATTGTATGAATTAGAACTATACTATTAAATTTTAATGAAAGAAAATAATGTTCTCAAAATAGACAAGCATGGTACTTGAAATTAAGGGACA

Coding sequence (CDS)

ATGGATACTGCTCAATGGCCTCAGGAGATTGCGTTGAAACCCAATGAAGAAATTGTGGCAAACACTTGCCCAAAACCAAGTGGTGTATCTGTTCTTGAGAGGAAAATTAGACCACAAAAGGAACAAGCTTTGAATTGTCCGAGGTGCAATTCCACCAATACTAAGTTTTGTTATTACAATAATTATAGCCTCACACAACCAAGATACTTTTGCAAAACATGTCGAAGGTATTGGACTGAAGGTGGTTCCTTAAGAAACATTCCTGTCGGAGGTGGCTCAAGGAAGAACAAAAGGCCTTCTTCTTCTTCTACTTCTTCTAATTCTTCTTCTTCTTCTACTTTATCCACATCTCCCACTTGTTCTAATCTTCCTCCAAAGAAGCCTCTTCATCTCCCTCAAACCCCTAAAACCACTCCTTCCCAAGATCTCAATTTGTCCTTTCCATCGTCGAATCAGCTTTCGGCGATGGAGCTTCTCACCGGGATGGCGAGCAACTCTAAGGGTTTAAATTGTTTCATTCCAATGCCATCTATTATCCCTGATCCTGCCTCCGTTTACGCATCCGGGTTTCCTGATCTCCATGACCAATTCAAGCCAAGCCTCGGATTCTCTCTCGATGGATATGGCGTTGTCCCCGGTGAGGCTAGCAATGGCGGCGGAGGGAGGGTTATGCAGCTGCCATTTGAGGATTTGAAGCAAGGGGCTAATGGAGTTGAGGAAGGGAAAGAGCATGGAGATTCAAGTGGGTATTGGAGTGGGATGTTGGGTGGAGGATCATGGTAA

Protein sequence

MDTAQWPQEIALKPNEEIVANTCPKPSGVSVLERKIRPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTSSNSSSSSTLSTSPTCSNLPPKKPLHLPQTPKTTPSQDLNLSFPSSNQLSAMELLTGMASNSKGLNCFIPMPSIIPDPASVYASGFPDLHDQFKPSLGFSLDGYGVVPGEASNGGGGRVMQLPFEDLKQGANGVEEGKEHGDSSGYWSGMLGGGSW
Homology
[Close]
BLAST of CmaCh02G009320 vs. Swiss-Prot
Match: DOF18_ARATH (Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8 PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.1e-47
Identity = 154/355 (43.38%), Postives = 187/355 (52.68%), Query Frame = 1 

Query: 1   MDTAQWPQEIALKPNEEIVANTCPK-----PSGVSVLERKIRPQKEQALNCPRCNSTNTK 60
           MDTA+WPQE  +KP  EIV NTC K     PS  + +ERK RP+K+QALNCPRCNS NTK
Sbjct: 1   MDTAKWPQEFVVKPMNEIVTNTCLKQQSNPPSPATPVERKARPEKDQALNCPRCNSLNTK 60

Query: 61  FCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTSSNSSSSSTL- 120
           FCYYNNYSLTQPRYFCK CRRYWT GGSLRNIPVGGG RKNKR SS+S+SS+ SSSS+  
Sbjct: 61  FCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGGVRKNKRSSSNSSSSSPSSSSSSK 120

Query: 121 --------STSPTCSNLPPK---------KPLHLPQT-PKTTPSQDLNLSF--------- 180
                   + +P   +L PK         + L   Q        +DLNL+F         
Sbjct: 121 KPLFANNNTPTPPLPHLNPKIGEAAATKVQDLTFSQGFGNAHEVKDLNLAFSQGFGIGHN 180

Query: 181 ------------PSSNQL--------SAMELLTGMASNSKGLN---CFIPMPSIIPDPAS 240
                       PSS+          S++ELL G++S+S   N    F+  P++    +S
Sbjct: 181 HHSSIPEFLQVVPSSSMKNNPLVSTSSSLELL-GISSSSASSNSRPAFMSYPNV--HDSS 240

Query: 241 VY-ASGF----PDLHDQFKPSLGFSLDGYGVVPGEASNGG--GGRVMQLPFEDL------ 261
           VY ASGF    P   +  +P+LGFSLDG   +  E  + G   GR + LPFE L      
Sbjct: 241 VYTASGFGLSYPQFQEFMRPALGFSLDGGDPLRQEEGSSGTNNGRPL-LPFESLLKLPVS 300

[Close]
BLAST of CmaCh02G009320 vs. Swiss-Prot
Match: DOF46_ARATH (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6 PE=2 SV=2)

HSP 1 Score: 173.3 bits (438), Expect = 3.4e-42
Identity = 119/279 (42.65%), Postives = 150/279 (53.76%), Query Frame = 1 

Query: 1   MDTAQWPQEIALKPNEEIVANTCPKPSGVSVL---------ERKIRPQKEQALNCPRCNS 60
           MDTAQWPQEI +KP EEIV NTCPKP    +          ERK RP+K+QA+NCPRCNS
Sbjct: 1   MDTAQWPQEIVVKPLEEIVTNTCPKPQPQPLQPQQPPSVGGERKARPEKDQAVNCPRCNS 60

Query: 61  TNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTSSNSSSS 120
           TNTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRNIPVGGGSRKNKR  S S+SS+ S++
Sbjct: 61  TNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNKR--SHSSSSDISNN 120

Query: 121 STLSTSPTCSNLPPKKPLHL---------PQTPK--TTPSQDLNLSFPSSNQL--SAMEL 180
            + ST P           HL          Q PK   T  QDLNL F     +  +  +L
Sbjct: 121 HSDSTQPATKKHLSDHHHHLMSMSQQGLTGQNPKFLETTQQDLNLGFSPHGMIRTNFTDL 180

Query: 181 LTGMASNSKGLNCFIPMPSIIPDPASVYASGFPDLHDQFKPSLGFSLDGYGVVPGEASNG 240
           +  + +N+   N     P I+   +++  S    + +        +    G         
Sbjct: 181 IHNIGNNTNKSN-NNNNPLIVSSCSAMATSSLDLIRNNSNNGNSSNSSFMGFPVHNQDPA 240

Query: 241 GGGRVMQLPFEDLKQGANGVEEGKEHGDSSGYWSGMLGG 258
            GG  MQ  ++        +    +H  ++G+  G  GG
Sbjct: 241 SGGFSMQDHYKPCNTNTTLLGFSLDHHHNNGFHGGFQGG 276

[Close]
BLAST of CmaCh02G009320 vs. Swiss-Prot
Match: DOF37_ARATH (Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana GN=DOF3.7 PE=1 SV=2)

HSP 1 Score: 160.6 bits (405), Expect = 2.3e-38
Identity = 112/249 (44.98%), Postives = 144/249 (57.83%), Query Frame = 1 

Query: 34  RKIRPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGS 93
           RK RPQ++  +NCPRCNSTNTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG S
Sbjct: 66  RKARPQEK--VNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSS 125

Query: 94  RKNKRPSSSSTSSNSSSSSTLSTSPTCSNLPPKKP--LHLPQTPKTTPSQDLN-LSFP-- 153
           RKNKR            SST   SP+   LP   P  L   Q P  + ++DLN LSFP  
Sbjct: 126 RKNKR------------SSTPLASPSNPKLPDLNPPILFSSQIPNKS-NKDLNLLSFPVM 185

Query: 154 SSNQLSAMELLTGMASNSKGLNCFIPMPSIIPDPASVYASGFPDLHD--QFKPSLGFSLD 213
             +   A+ELL     +S+G+N F+P   +  +     + GFP + D  Q   +L FS+D
Sbjct: 186 QDHHHHALELLRSNGVSSRGMNTFLPGQMMDSNSVLYSSLGFPTMPDYKQSNNNLSFSID 245

Query: 214 GYGVVPGEASN------------GGGGRVMQLPFEDLKQGANGVEEGKEHGDSSGYWSGM 261
            +  +     N             G  RV+  PF D+K+ ++  +E K HG+++ YW+GM
Sbjct: 246 HHQGIGHNTINSNQRAQDNNDDMNGASRVL-FPFSDMKELSSTTQE-KSHGNNT-YWNGM 296

[Close]
BLAST of CmaCh02G009320 vs. Swiss-Prot
Match: DOF25_ARATH (Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana GN=DOF2.5 PE=2 SV=3)

HSP 1 Score: 133.3 bits (334), Expect = 3.9e-30
Identity = 82/123 (66.67%), Postives = 88/123 (71.54%), Query Frame = 1 

Query: 31  VLERKIRPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVG 90
           V ERK RPQ++  LNCPRCNSTNTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVG
Sbjct: 69  VAERKARPQEK--LNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVG 128

Query: 91  GGSRKNKRPSSSSTSSNSSSSSTLSTSPTCSNLPPKKPLHL----PQTPKTTPSQDLN-L 149
           G SRKNKR      SS+SSSS+ L T P  S+LP   P  L            SQDLN L
Sbjct: 129 GSSRKNKR------SSSSSSSNILQTIP--SSLPDLNPPILFSNQIHNKSKGSSQDLNLL 181

[Close]
BLAST of CmaCh02G009320 vs. Swiss-Prot
Match: DOF53_ARATH (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 5.3e-27
Identity = 61/97 (62.89%), Postives = 72/97 (74.23%), Query Frame = 1 

Query: 10  IALKPNEEIVANTCPKPSGVSVLERKIRPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRY 69
           ++   N   + N   KPS  + + R   P  E AL CPRC+STNTKFCYYNNYSLTQPRY
Sbjct: 23  LSYSSNPTPLDNDQKKPSPATAVTRPQPP--ELALRCPRCDSTNTKFCYYNNYSLTQPRY 82

Query: 70  FCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTSS 107
           FCK+CRRYWT+GG+LRNIPVGGG RKNKR +SS+  S
Sbjct: 83  FCKSCRRYWTKGGTLRNIPVGGGCRKNKRSTSSAARS 117

[Close]
BLAST of CmaCh02G009320 vs. TrEMBL
Match: A0A061G2Y5_THECC (F-box family protein isoform 1 OS=Theobroma cacao GN=TCM_015683 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.6e-75
Identity = 173/296 (58.45%), Postives = 197/296 (66.55%), Query Frame = 1 

Query: 1   MDTAQWPQEIALKPNEEIVANTCPKPSGVSVLERKIRPQKEQALNCPRCNSTNTKFCYYN 60
           MDTA+WPQEI +KP EEIV NTCPKP+    LERK RPQKEQALNCPRCNSTNTKFCYYN
Sbjct: 1   MDTAKWPQEIVVKPIEEIVTNTCPKPAA---LERKARPQKEQALNCPRCNSTNTKFCYYN 60

Query: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTSSNSSSSSTLSTSPTC 120
           NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKR +SSS+SS+SSSS  L    T 
Sbjct: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSASSSSSSSSSSSKKLPDLVT- 120

Query: 121 SNLPPKKPLHLPQTPKTTPSQDLNLSFPSS------------------------------ 180
              PP       Q PK    QDLNL+FP+S                              
Sbjct: 121 ---PPSLSQSSTQNPKIQDGQDLNLAFPASQGYRSMSELVQVPNSVENNKSQIPSSSSPT 180

Query: 181 NQLSAMELLTGMASNSKGLNCFIPMPSIIPDPASVYASGFPDLHDQFKPSLGFSLD---- 240
           +QLSA+ELLTG++S  +GLN F+PM   +PDP +VY SGFP    +FKP+L FSLD    
Sbjct: 181 SQLSALELLTGISS--RGLNSFLPMS--VPDPNTVYTSGFP--MQEFKPTLNFSLDGLGS 240

Query: 241 GYGVVPGEASNGGGGRVMQLPFEDLKQ--GANGVEEGKEHGDSSGYWSGMLGGGSW 261
           GYG + G     G    +  PFEDLKQ      +E+ KE GDS+GYW+GMLGGGSW
Sbjct: 241 GYGSLQGVQETTGR---LLFPFEDLKQVSSTTEIEQNKEQGDSAGYWTGMLGGGSW 280

[Close]
BLAST of CmaCh02G009320 vs. TrEMBL
Match: A0A061G428_THECC (F-box family protein isoform 2 OS=Theobroma cacao GN=TCM_015683 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 2.4e-74
Identity = 172/295 (58.31%), Postives = 196/295 (66.44%), Query Frame = 1 

Query: 1   MDTAQWPQEIALKPNEEIVANTCPKPSGVSVLERKIRPQKEQALNCPRCNSTNTKFCYYN 60
           MDTA+WPQEI +KP EEIV NTCPKP+    LERK RPQKEQALNCPRCNSTNTKFCYYN
Sbjct: 1   MDTAKWPQEIVVKPIEEIVTNTCPKPAA---LERKARPQKEQALNCPRCNSTNTKFCYYN 60

Query: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTSSNSSSSSTLSTSPTC 120
           NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKR +SSS+SS+SSSS  L    T 
Sbjct: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSASSSSSSSSSSSKKLPDLVT- 120

Query: 121 SNLPPKKPLHLPQTPKTTPSQDLNLSFPSS------------------------------ 180
              PP       Q PK    QDLNL+FP+S                              
Sbjct: 121 ---PPSLSQSSTQNPKIQDGQDLNLAFPASQGYRSMSELVQVPNSVENNKSQIPSSSSPT 180

Query: 181 NQLSAMELLTGMASNSKGLNCFIPMPSIIPDPASVYASGFPDLHDQFKPSLGFSLD---- 240
           +QLSA+ELLTG++S  +GLN F+PM   +PDP +VY SGFP    +FKP+L FSLD    
Sbjct: 181 SQLSALELLTGISS--RGLNSFLPMS--VPDPNTVYTSGFP--MQEFKPTLNFSLDGLGS 240

Query: 241 GYGVVPGEASNGGGGRVMQLPFEDLKQ--GANGVEEGKEHGDSSGYWSGMLGGGS 260
           GYG + G     G    +  PFEDLKQ      +E+ KE GDS+GYW+GMLGGGS
Sbjct: 241 GYGSLQGVQETTGR---LLFPFEDLKQVSSTTEIEQNKEQGDSAGYWTGMLGGGS 279

[Close]
BLAST of CmaCh02G009320 vs. TrEMBL
Match: B9GK99_POPTR (DNA binding with one finger 7 family protein OS=Populus trichocarpa GN=POPTR_0001s11130g PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 7.6e-73
Identity = 163/265 (61.51%), Postives = 192/265 (72.45%), Query Frame = 1 

Query: 1   MDTAQWPQEIALKPNEEIVANTCPKPSGVSVLERKIRPQKEQALNCPRCNSTNTKFCYYN 60
           MDTAQWPQEI +KP EEIV NTC KP     LERK+RPQKEQALNCPRCNSTNTKFCYYN
Sbjct: 1   MDTAQWPQEIVVKPIEEIVVNTCSKPPA---LERKVRPQKEQALNCPRCNSTNTKFCYYN 60

Query: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTSSNSSSSSTLSTSPTC 120
           NYSLTQPRYFCKTCRRYWTEGGSLR+IPVGGGSRKNKR S+SS+SS+      +S     
Sbjct: 61  NYSLTQPRYFCKTCRRYWTEGGSLRSIPVGGGSRKNKRSSASSSSSSKKLPDLIS----- 120

Query: 121 SNLPPKKPLHLPQTPKTTPSQDLNLSFPSSNQLSAMELLTGMASNSKGLNCFIPMPSIIP 180
              PP       +  K    QDLNL+FPS+  +  +ELLTG+  +S+GLN F PMP +  
Sbjct: 121 ---PPTLSQTSTENHKIHEGQDLNLAFPSTQGIRTLELLTGI--SSRGLNSF-PMP-VHQ 180

Query: 181 DPASVYASGFPDLHDQFKPSLGFSLDGYGVVPGEAS--NGGGGRVMQLPFEDLKQGANG- 240
           DP+++Y SGFP L D FKP+L FSLDG G   G+    +   GR++  PFEDLKQ  +  
Sbjct: 181 DPSTLYPSGFP-LQD-FKPTLSFSLDGLGSGYGDLQGVHETNGRLL-FPFEDLKQQVSST 240

Query: 241 --VEEGKEHGDSSGYWSGMLGGGSW 261
             +E+ KEHGDS+GYW+GMLGGGSW
Sbjct: 241 ADIEQNKEHGDSTGYWTGMLGGGSW 247

[Close]
BLAST of CmaCh02G009320 vs. TrEMBL
Match: V4VIN3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021521mg PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.9e-71
Identity = 168/301 (55.81%), Postives = 194/301 (64.45%), Query Frame = 1 

Query: 1   MDTAQWPQEIALKPNEEIVANTCPKPSGVSVLERKIRPQKEQALNCPRCNSTNTKFCYYN 60
           MDTAQWPQEI +KP EEIV NTCPKP+  + LERK RPQKEQALNCPRCNSTNTKFCYYN
Sbjct: 1   MDTAQWPQEIVVKPIEEIVTNTCPKPASAAALERKARPQKEQALNCPRCNSTNTKFCYYN 60

Query: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSS----------------- 120
           NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKR SSSS                 
Sbjct: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSSSSKKLPDPATPPSHHPHQN 120

Query: 121 -----------------TSSNSSSSSTLSTSPTCSNLPPKKPLHLPQTPKTTPSQDLNLS 180
                            T+    S S L   P   N   + P+    T  TT +      
Sbjct: 121 PKIHDHGEDLNLSFPAATTQGYRSFSELVQLPNIDN-KSQIPISSSTTTTTTTT------ 180

Query: 181 FPSSNQLSAMELLTGMASNSKGLNCFIPMPSIIPDPASVYASGFPDLHDQFKPSLGFSLD 240
             SS QLSA+ELLTG++S  +GLN F+PMP  +PDP +VYA GFP     FKP+L FSLD
Sbjct: 181 --SSQQLSALELLTGISS--RGLNSFMPMP--VPDPNTVYAPGFP--MQDFKPTLNFSLD 240

Query: 241 G----YGVVPGEASNGGGGRVMQLPFEDLKQ---GANGVEEGKEHGDSSGYWSGMLGGGS 261
           G    YG +  ++     GR++  PFEDLKQ    ++ +E+ +EHGDSSGYW+GMLGGGS
Sbjct: 241 GLGSGYGSLHHQSVQENNGRLL-FPFEDLKQVSSTSDHMEQNREHGDSSGYWTGMLGGGS 285

[Close]
BLAST of CmaCh02G009320 vs. TrEMBL
Match: A0A067GDE5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023047mg PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.4e-71
Identity = 167/301 (55.48%), Postives = 194/301 (64.45%), Query Frame = 1 

Query: 1   MDTAQWPQEIALKPNEEIVANTCPKPSGVSVLERKIRPQKEQALNCPRCNSTNTKFCYYN 60
           MDTAQWPQEI +KP EEIV NTCPKP+  + LERK RPQKEQALNCPRCNSTNTKFCYYN
Sbjct: 1   MDTAQWPQEIVVKPIEEIVTNTCPKPASAAALERKARPQKEQALNCPRCNSTNTKFCYYN 60

Query: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSS----------------- 120
           NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKR SSSS                 
Sbjct: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSSSSKKLPDPATPPSHHPHQN 120

Query: 121 -----------------TSSNSSSSSTLSTSPTCSNLPPKKPLHLPQTPKTTPSQDLNLS 180
                            T+    S S L   P   N   + P+    T  TT +      
Sbjct: 121 PKIHDHGEDLNLSFPAATTQGYRSFSELVQLPNIDN-KSQIPISSSTTTTTTTT------ 180

Query: 181 FPSSNQLSAMELLTGMASNSKGLNCFIPMPSIIPDPASVYASGFPDLHDQFKPSLGFSLD 240
             SS QLSA+ELLTG++S  +GLN F+PMP  +PDP ++YA GFP     FKP+L FSLD
Sbjct: 181 --SSQQLSALELLTGISS--RGLNSFMPMP--VPDPNAIYAPGFP--MQDFKPTLNFSLD 240

Query: 241 G----YGVVPGEASNGGGGRVMQLPFEDLKQ---GANGVEEGKEHGDSSGYWSGMLGGGS 261
           G    YG +  ++     GR++  PFEDLKQ    ++ +E+ +EHGDSSGYW+GMLGGGS
Sbjct: 241 GLGSGYGSLHHQSVQENNGRLL-FPFEDLKQVSSTSDHMEQNREHGDSSGYWTGMLGGGS 285

[Close]
BLAST of CmaCh02G009320 vs. TAIR10
Match: AT1G64620.1 (AT1G64620.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 190.7 bits (483), Expect = 1.2e-48
Identity = 154/355 (43.38%), Postives = 187/355 (52.68%), Query Frame = 1 

Query: 1   MDTAQWPQEIALKPNEEIVANTCPK-----PSGVSVLERKIRPQKEQALNCPRCNSTNTK 60
           MDTA+WPQE  +KP  EIV NTC K     PS  + +ERK RP+K+QALNCPRCNS NTK
Sbjct: 1   MDTAKWPQEFVVKPMNEIVTNTCLKQQSNPPSPATPVERKARPEKDQALNCPRCNSLNTK 60

Query: 61  FCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTSSNSSSSSTL- 120
           FCYYNNYSLTQPRYFCK CRRYWT GGSLRNIPVGGG RKNKR SS+S+SS+ SSSS+  
Sbjct: 61  FCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGGVRKNKRSSSNSSSSSPSSSSSSK 120

Query: 121 --------STSPTCSNLPPK---------KPLHLPQT-PKTTPSQDLNLSF--------- 180
                   + +P   +L PK         + L   Q        +DLNL+F         
Sbjct: 121 KPLFANNNTPTPPLPHLNPKIGEAAATKVQDLTFSQGFGNAHEVKDLNLAFSQGFGIGHN 180

Query: 181 ------------PSSNQL--------SAMELLTGMASNSKGLN---CFIPMPSIIPDPAS 240
                       PSS+          S++ELL G++S+S   N    F+  P++    +S
Sbjct: 181 HHSSIPEFLQVVPSSSMKNNPLVSTSSSLELL-GISSSSASSNSRPAFMSYPNV--HDSS 240

Query: 241 VY-ASGF----PDLHDQFKPSLGFSLDGYGVVPGEASNGG--GGRVMQLPFEDL------ 261
           VY ASGF    P   +  +P+LGFSLDG   +  E  + G   GR + LPFE L      
Sbjct: 241 VYTASGFGLSYPQFQEFMRPALGFSLDGGDPLRQEEGSSGTNNGRPL-LPFESLLKLPVS 300

[Close]
BLAST of CmaCh02G009320 vs. TAIR10
Match: AT4G24060.1 (AT4G24060.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 173.3 bits (438), Expect = 1.9e-43
Identity = 119/279 (42.65%), Postives = 150/279 (53.76%), Query Frame = 1 

Query: 1   MDTAQWPQEIALKPNEEIVANTCPKPSGVSVL---------ERKIRPQKEQALNCPRCNS 60
           MDTAQWPQEI +KP EEIV NTCPKP    +          ERK RP+K+QA+NCPRCNS
Sbjct: 1   MDTAQWPQEIVVKPLEEIVTNTCPKPQPQPLQPQQPPSVGGERKARPEKDQAVNCPRCNS 60

Query: 61  TNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTSSNSSSS 120
           TNTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRNIPVGGGSRKNKR  S S+SS+ S++
Sbjct: 61  TNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNKR--SHSSSSDISNN 120

Query: 121 STLSTSPTCSNLPPKKPLHL---------PQTPK--TTPSQDLNLSFPSSNQL--SAMEL 180
            + ST P           HL          Q PK   T  QDLNL F     +  +  +L
Sbjct: 121 HSDSTQPATKKHLSDHHHHLMSMSQQGLTGQNPKFLETTQQDLNLGFSPHGMIRTNFTDL 180

Query: 181 LTGMASNSKGLNCFIPMPSIIPDPASVYASGFPDLHDQFKPSLGFSLDGYGVVPGEASNG 240
           +  + +N+   N     P I+   +++  S    + +        +    G         
Sbjct: 181 IHNIGNNTNKSN-NNNNPLIVSSCSAMATSSLDLIRNNSNNGNSSNSSFMGFPVHNQDPA 240

Query: 241 GGGRVMQLPFEDLKQGANGVEEGKEHGDSSGYWSGMLGG 258
            GG  MQ  ++        +    +H  ++G+  G  GG
Sbjct: 241 SGGFSMQDHYKPCNTNTTLLGFSLDHHHNNGFHGGFQGG 276

[Close]
BLAST of CmaCh02G009320 vs. TAIR10
Match: AT2G46590.2 (AT2G46590.2 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 133.3 bits (334), Expect = 2.2e-31
Identity = 82/123 (66.67%), Postives = 88/123 (71.54%), Query Frame = 1 

Query: 31  VLERKIRPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVG 90
           V ERK RPQ++  LNCPRCNSTNTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVG
Sbjct: 69  VAERKARPQEK--LNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVG 128

Query: 91  GGSRKNKRPSSSSTSSNSSSSSTLSTSPTCSNLPPKKPLHL----PQTPKTTPSQDLN-L 149
           G SRKNKR      SS+SSSS+ L T P  S+LP   P  L            SQDLN L
Sbjct: 129 GSSRKNKR------SSSSSSSNILQTIP--SSLPDLNPPILFSNQIHNKSKGSSQDLNLL 181

[Close]
BLAST of CmaCh02G009320 vs. TAIR10
Match: AT3G61850.4 (AT3G61850.4 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 131.0 bits (328), Expect = 1.1e-30
Identity = 98/226 (43.36%), Postives = 119/226 (52.65%), Query Frame = 1 

Query: 34  RKIRPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGS 93
           RK RPQ++  +NCPRCNSTNTKFCYYNNYSLTQPRYFCK CRRYWTEGGSLRN+PVGG S
Sbjct: 66  RKARPQEK--VNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSS 125

Query: 94  RKNKRPSSSSTSSNSSSSSTLSTSPTCSNLPPKKP--LHLPQTPKTTPSQDLN-LSFPSS 153
           RKNKR            SST   SP+   LP   P  L   Q P  + ++DLN LSFP  
Sbjct: 126 RKNKR------------SSTPLASPSNPKLPDLNPPILFSSQIPNKS-NKDLNLLSFPVM 185

Query: 154 NQLSAMELLTGMASNSKGLNCFIPMPSIIPD--PASVYASGFPDLHDQFKPSLGFSLDGY 213
                         +  G++ F  MP I  +   +S+YAS  P    +   S G S  G 
Sbjct: 186 QD-----------HHHHGMSHFFHMPKIENNNTSSSIYASSSPVSALELLRSNGVSSRGM 245

Query: 214 GV-VPGEASNGGGGRVMQLPF---EDLKQGANGVEEGKEHGDSSGY 251
              +PG+  +        L F    D KQ  N +    +H    G+
Sbjct: 246 NTFLPGQMMDSNSVLYSSLGFPTMPDYKQSNNNLSFSIDHHQGIGH 265

[Close]
BLAST of CmaCh02G009320 vs. TAIR10
Match: AT5G60200.1 (AT5G60200.1 TARGET OF MONOPTEROS 6)

HSP 1 Score: 122.9 bits (307), Expect = 3.0e-28
Identity = 61/97 (62.89%), Postives = 72/97 (74.23%), Query Frame = 1 

Query: 10  IALKPNEEIVANTCPKPSGVSVLERKIRPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRY 69
           ++   N   + N   KPS  + + R   P  E AL CPRC+STNTKFCYYNNYSLTQPRY
Sbjct: 23  LSYSSNPTPLDNDQKKPSPATAVTRPQPP--ELALRCPRCDSTNTKFCYYNNYSLTQPRY 82

Query: 70  FCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTSS 107
           FCK+CRRYWT+GG+LRNIPVGGG RKNKR +SS+  S
Sbjct: 83  FCKSCRRYWTKGGTLRNIPVGGGCRKNKRSTSSAARS 117

[Close]
BLAST of CmaCh02G009320 vs. NCBI nr
Match: gi|590675428|ref|XP_007039445.1| (F-box family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 290.8 bits (743), Expect = 2.3e-75
Identity = 173/296 (58.45%), Postives = 197/296 (66.55%), Query Frame = 1 

Query: 1   MDTAQWPQEIALKPNEEIVANTCPKPSGVSVLERKIRPQKEQALNCPRCNSTNTKFCYYN 60
           MDTA+WPQEI +KP EEIV NTCPKP+    LERK RPQKEQALNCPRCNSTNTKFCYYN
Sbjct: 1   MDTAKWPQEIVVKPIEEIVTNTCPKPAA---LERKARPQKEQALNCPRCNSTNTKFCYYN 60

Query: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTSSNSSSSSTLSTSPTC 120
           NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKR +SSS+SS+SSSS  L    T 
Sbjct: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSASSSSSSSSSSSKKLPDLVT- 120

Query: 121 SNLPPKKPLHLPQTPKTTPSQDLNLSFPSS------------------------------ 180
              PP       Q PK    QDLNL+FP+S                              
Sbjct: 121 ---PPSLSQSSTQNPKIQDGQDLNLAFPASQGYRSMSELVQVPNSVENNKSQIPSSSSPT 180

Query: 181 NQLSAMELLTGMASNSKGLNCFIPMPSIIPDPASVYASGFPDLHDQFKPSLGFSLD---- 240
           +QLSA+ELLTG++S  +GLN F+PM   +PDP +VY SGFP    +FKP+L FSLD    
Sbjct: 181 SQLSALELLTGISS--RGLNSFLPMS--VPDPNTVYTSGFP--MQEFKPTLNFSLDGLGS 240

Query: 241 GYGVVPGEASNGGGGRVMQLPFEDLKQ--GANGVEEGKEHGDSSGYWSGMLGGGSW 261
           GYG + G     G    +  PFEDLKQ      +E+ KE GDS+GYW+GMLGGGSW
Sbjct: 241 GYGSLQGVQETTGR---LLFPFEDLKQVSSTTEIEQNKEQGDSAGYWTGMLGGGSW 280

[Close]
BLAST of CmaCh02G009320 vs. NCBI nr
Match: gi|590675432|ref|XP_007039446.1| (F-box family protein isoform 2 [Theobroma cacao])

HSP 1 Score: 287.0 bits (733), Expect = 3.4e-74
Identity = 172/295 (58.31%), Postives = 196/295 (66.44%), Query Frame = 1 

Query: 1   MDTAQWPQEIALKPNEEIVANTCPKPSGVSVLERKIRPQKEQALNCPRCNSTNTKFCYYN 60
           MDTA+WPQEI +KP EEIV NTCPKP+    LERK RPQKEQALNCPRCNSTNTKFCYYN
Sbjct: 1   MDTAKWPQEIVVKPIEEIVTNTCPKPAA---LERKARPQKEQALNCPRCNSTNTKFCYYN 60

Query: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTSSNSSSSSTLSTSPTC 120
           NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKR +SSS+SS+SSSS  L    T 
Sbjct: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSASSSSSSSSSSSKKLPDLVT- 120

Query: 121 SNLPPKKPLHLPQTPKTTPSQDLNLSFPSS------------------------------ 180
              PP       Q PK    QDLNL+FP+S                              
Sbjct: 121 ---PPSLSQSSTQNPKIQDGQDLNLAFPASQGYRSMSELVQVPNSVENNKSQIPSSSSPT 180

Query: 181 NQLSAMELLTGMASNSKGLNCFIPMPSIIPDPASVYASGFPDLHDQFKPSLGFSLD---- 240
           +QLSA+ELLTG++S  +GLN F+PM   +PDP +VY SGFP    +FKP+L FSLD    
Sbjct: 181 SQLSALELLTGISS--RGLNSFLPMS--VPDPNTVYTSGFP--MQEFKPTLNFSLDGLGS 240

Query: 241 GYGVVPGEASNGGGGRVMQLPFEDLKQ--GANGVEEGKEHGDSSGYWSGMLGGGS 260
           GYG + G     G    +  PFEDLKQ      +E+ KE GDS+GYW+GMLGGGS
Sbjct: 241 GYGSLQGVQETTGR---LLFPFEDLKQVSSTTEIEQNKEQGDSAGYWTGMLGGGS 279

[Close]
BLAST of CmaCh02G009320 vs. NCBI nr
Match: gi|224058056|ref|XP_002299441.1| (DNA binding with one finger 7 family protein [Populus trichocarpa])

HSP 1 Score: 282.0 bits (720), Expect = 1.1e-72
Identity = 163/265 (61.51%), Postives = 192/265 (72.45%), Query Frame = 1 

Query: 1   MDTAQWPQEIALKPNEEIVANTCPKPSGVSVLERKIRPQKEQALNCPRCNSTNTKFCYYN 60
           MDTAQWPQEI +KP EEIV NTC KP     LERK+RPQKEQALNCPRCNSTNTKFCYYN
Sbjct: 1   MDTAQWPQEIVVKPIEEIVVNTCSKPPA---LERKVRPQKEQALNCPRCNSTNTKFCYYN 60

Query: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSTSSNSSSSSTLSTSPTC 120
           NYSLTQPRYFCKTCRRYWTEGGSLR+IPVGGGSRKNKR S+SS+SS+      +S     
Sbjct: 61  NYSLTQPRYFCKTCRRYWTEGGSLRSIPVGGGSRKNKRSSASSSSSSKKLPDLIS----- 120

Query: 121 SNLPPKKPLHLPQTPKTTPSQDLNLSFPSSNQLSAMELLTGMASNSKGLNCFIPMPSIIP 180
              PP       +  K    QDLNL+FPS+  +  +ELLTG+  +S+GLN F PMP +  
Sbjct: 121 ---PPTLSQTSTENHKIHEGQDLNLAFPSTQGIRTLELLTGI--SSRGLNSF-PMP-VHQ 180

Query: 181 DPASVYASGFPDLHDQFKPSLGFSLDGYGVVPGEAS--NGGGGRVMQLPFEDLKQGANG- 240
           DP+++Y SGFP L D FKP+L FSLDG G   G+    +   GR++  PFEDLKQ  +  
Sbjct: 181 DPSTLYPSGFP-LQD-FKPTLSFSLDGLGSGYGDLQGVHETNGRLL-FPFEDLKQQVSST 240

Query: 241 --VEEGKEHGDSSGYWSGMLGGGSW 261
             +E+ KEHGDS+GYW+GMLGGGSW
Sbjct: 241 ADIEQNKEHGDSTGYWTGMLGGGSW 247

[Close]
BLAST of CmaCh02G009320 vs. NCBI nr
Match: gi|567893562|ref|XP_006439269.1| (hypothetical protein CICLE_v10021521mg [Citrus clementina])

HSP 1 Score: 277.3 bits (708), Expect = 2.7e-71
Identity = 168/301 (55.81%), Postives = 194/301 (64.45%), Query Frame = 1 

Query: 1   MDTAQWPQEIALKPNEEIVANTCPKPSGVSVLERKIRPQKEQALNCPRCNSTNTKFCYYN 60
           MDTAQWPQEI +KP EEIV NTCPKP+  + LERK RPQKEQALNCPRCNSTNTKFCYYN
Sbjct: 1   MDTAQWPQEIVVKPIEEIVTNTCPKPASAAALERKARPQKEQALNCPRCNSTNTKFCYYN 60

Query: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSS----------------- 120
           NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKR SSSS                 
Sbjct: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSSSSKKLPDPATPPSHHPHQN 120

Query: 121 -----------------TSSNSSSSSTLSTSPTCSNLPPKKPLHLPQTPKTTPSQDLNLS 180
                            T+    S S L   P   N   + P+    T  TT +      
Sbjct: 121 PKIHDHGEDLNLSFPAATTQGYRSFSELVQLPNIDN-KSQIPISSSTTTTTTTT------ 180

Query: 181 FPSSNQLSAMELLTGMASNSKGLNCFIPMPSIIPDPASVYASGFPDLHDQFKPSLGFSLD 240
             SS QLSA+ELLTG++S  +GLN F+PMP  +PDP +VYA GFP     FKP+L FSLD
Sbjct: 181 --SSQQLSALELLTGISS--RGLNSFMPMP--VPDPNTVYAPGFP--MQDFKPTLNFSLD 240

Query: 241 G----YGVVPGEASNGGGGRVMQLPFEDLKQ---GANGVEEGKEHGDSSGYWSGMLGGGS 261
           G    YG +  ++     GR++  PFEDLKQ    ++ +E+ +EHGDSSGYW+GMLGGGS
Sbjct: 241 GLGSGYGSLHHQSVQENNGRLL-FPFEDLKQVSSTSDHMEQNREHGDSSGYWTGMLGGGS 285

[Close]
BLAST of CmaCh02G009320 vs. NCBI nr
Match: gi|641857915|gb|KDO76660.1| (hypothetical protein CISIN_1g023047mg [Citrus sinensis])

HSP 1 Score: 276.9 bits (707), Expect = 3.5e-71
Identity = 167/301 (55.48%), Postives = 194/301 (64.45%), Query Frame = 1 

Query: 1   MDTAQWPQEIALKPNEEIVANTCPKPSGVSVLERKIRPQKEQALNCPRCNSTNTKFCYYN 60
           MDTAQWPQEI +KP EEIV NTCPKP+  + LERK RPQKEQALNCPRCNSTNTKFCYYN
Sbjct: 1   MDTAQWPQEIVVKPIEEIVTNTCPKPASAAALERKARPQKEQALNCPRCNSTNTKFCYYN 60

Query: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSS----------------- 120
           NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKR SSSS                 
Sbjct: 61  NYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSSSSKKLPDPATPPSHHPHQN 120

Query: 121 -----------------TSSNSSSSSTLSTSPTCSNLPPKKPLHLPQTPKTTPSQDLNLS 180
                            T+    S S L   P   N   + P+    T  TT +      
Sbjct: 121 PKIHDHGEDLNLSFPAATTQGYRSFSELVQLPNIDN-KSQIPISSSTTTTTTTT------ 180

Query: 181 FPSSNQLSAMELLTGMASNSKGLNCFIPMPSIIPDPASVYASGFPDLHDQFKPSLGFSLD 240
             SS QLSA+ELLTG++S  +GLN F+PMP  +PDP ++YA GFP     FKP+L FSLD
Sbjct: 181 --SSQQLSALELLTGISS--RGLNSFMPMP--VPDPNAIYAPGFP--MQDFKPTLNFSLD 240

Query: 241 G----YGVVPGEASNGGGGRVMQLPFEDLKQ---GANGVEEGKEHGDSSGYWSGMLGGGS 261
           G    YG +  ++     GR++  PFEDLKQ    ++ +E+ +EHGDSSGYW+GMLGGGS
Sbjct: 241 GLGSGYGSLHHQSVQENNGRLL-FPFEDLKQVSSTSDHMEQNREHGDSSGYWTGMLGGGS 285

The following BLAST results are available for this feature:
BLAST of CmaCh02G009320 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DOF18_ARATH2.1e-4743.38Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8 PE=2 SV=1[more]
DOF46_ARATH3.4e-4242.65Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6 PE=2 SV=2[more]
DOF37_ARATH2.3e-3844.98Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana GN=DOF3.7 PE=1 SV=2[more]
DOF25_ARATH3.9e-3066.67Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana GN=DOF2.5 PE=2 SV=3[more]
DOF53_ARATH5.3e-2762.89Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3 PE=2 SV=1[more]
BLAST of CmaCh02G009320 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A061G2Y5_THECC1.6e-7558.45F-box family protein isoform 1 OS=Theobroma cacao GN=TCM_015683 PE=4 SV=1[more]
A0A061G428_THECC2.4e-7458.31F-box family protein isoform 2 OS=Theobroma cacao GN=TCM_015683 PE=4 SV=1[more]
B9GK99_POPTR7.6e-7361.51DNA binding with one finger 7 family protein OS=Populus trichocarpa GN=POPTR_000... [more]
V4VIN3_9ROSI1.9e-7155.81Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021521mg PE=4 SV=1[more]
A0A067GDE5_CITSI2.4e-7155.48Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023047mg PE=4 SV=1[more]
BLAST of CmaCh02G009320 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G64620.11.2e-4843.38 Dof-type zinc finger DNA-binding family protein[more]
AT4G24060.11.9e-4342.65 Dof-type zinc finger DNA-binding family protein[more]
AT2G46590.22.2e-3166.67 Dof-type zinc finger DNA-binding family protein[more]
AT3G61850.41.1e-3043.36 Dof-type zinc finger DNA-binding family protein[more]
AT5G60200.13.0e-2862.89 TARGET OF MONOPTEROS 6[more]
BLAST of CmaCh02G009320 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|590675428|ref|XP_007039445.1|2.3e-7558.45F-box family protein isoform 1 [Theobroma cacao][more]
gi|590675432|ref|XP_007039446.1|3.4e-7458.31F-box family protein isoform 2 [Theobroma cacao][more]
gi|224058056|ref|XP_002299441.1|1.1e-7261.51DNA binding with one finger 7 family protein [Populus trichocarpa][more]
gi|567893562|ref|XP_006439269.1|2.7e-7155.81hypothetical protein CICLE_v10021521mg [Citrus clementina][more]
gi|641857915|gb|KDO76660.1|3.5e-7155.48hypothetical protein CISIN_1g023047mg [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003851Znf_Dof
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0044212 transcription regulatory region DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh02G009320.1CmaCh02G009320.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003851Zinc finger, Dof-typePRODOMPD007478coord: 37..98
score: 1.0
IPR003851Zinc finger, Dof-typePFAMPF02701zf-Dofcoord: 42..98
score: 1.6
IPR003851Zinc finger, Dof-typePROSITEPS01361ZF_DOF_1coord: 46..82
scor
IPR003851Zinc finger, Dof-typePROFILEPS50884ZF_DOF_2coord: 44..98
score: 29
NoneNo IPR availablePANTHERPTHR31992FAMILY NOT NAMEDcoord: 1..260
score: 4.0E
NoneNo IPR availablePANTHERPTHR31992:SF15SUBFAMILY NOT NAMEDcoord: 1..260
score: 4.0E