CsGy4G021930 (gene) Cucumber (Gy14) v2

Overview
NameCsGy4G021930
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr4 : 28512384 .. 28512728 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGTGATTATGATTGCTTTGACAAATGACTTTCCTTTCTTCTTGGTTTCCATTTTCTCACGACTCCGCAGATTGGGAACCAGTAAAATATAAAAGAAACCTTTTTTGTGATTTGGGCATGTGAAAAAGATTAAATAGGGAAGAGAAGAGGAAACTGTTCAACATGATTGTGTTTCCAATAATTAAGGGGAAAATGAATGCGATGTGGATGTGGATGTGATGGATTTGAGGGCCAACAATTGTTGCTTCCCCGTTGCTGCAATCATAAATTTGATGTTGCCACTGTGCTTCATCCCCATGCCTCACTCCGCGTTCCGCGTTTCCCCTCTAAACGACGTTTAA

mRNA sequence

ATGAATGTGATTATGATTGCTTTGACAAATGACTTTCCTTTCTTCTTGGTTTCCATTTTCTCACGACTCCGCAGATTGGGAACCAGGGAAAATGAATGCGATGTGGATGTGGATGTGATGGATTTGAGGGCCAACAATTGTTGCTTCCCCGTTGCTGCAATCATAAATTTGATGTTGCCACTGTGCTTCATCCCCATGCCTCACTCCGCGTTCCGCGTTTCCCCTCTAAACGACGTTTAA

Coding sequence (CDS)

ATGAATGTGATTATGATTGCTTTGACAAATGACTTTCCTTTCTTCTTGGTTTCCATTTTCTCACGACTCCGCAGATTGGGAACCAGGGAAAATGAATGCGATGTGGATGTGGATGTGATGGATTTGAGGGCCAACAATTGTTGCTTCCCCGTTGCTGCAATCATAAATTTGATGTTGCCACTGTGCTTCATCCCCATGCCTCACTCCGCGTTCCGCGTTTCCCCTCTAAACGACGTTTAA

Protein sequence

MNVIMIALTNDFPFFLVSIFSRLRRLGTRENECDVDVDVMDLRANNCCFPVAAIINLMLPLCFIPMPHSAFRVSPLNDV
Homology
[Close]
BLAST of CsGy4G021930 vs. NCBI nr
Match: KGN55140.1 (hypothetical protein Csa_4G637800 [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 3.3e-37
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MNVIMIALTNDFPFFLVSIFSRLRRLGTRENECDVDVDVMDLRANNCCFPVAAIINLMLP 60
          MNVIMIALTNDFPFFLVSIFSRLRRLGTRENECDVDVDVMDLRANNCCFPVAAIINLMLP
Sbjct: 1  MNVIMIALTNDFPFFLVSIFSRLRRLGTRENECDVDVDVMDLRANNCCFPVAAIINLMLP 60

Query: 61 LCFIPMPHSAFRVSPLNDV 80
          LCFIPMPHSAFRVSPLNDV
Sbjct: 61 LCFIPMPHSAFRVSPLNDV 79

[Close]
BLAST of CsGy4G021930 vs. TrEMBL
Match: tr|A0A0A0KZN4|A0A0A0KZN4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G637800 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.2e-37
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MNVIMIALTNDFPFFLVSIFSRLRRLGTRENECDVDVDVMDLRANNCCFPVAAIINLMLP 60
          MNVIMIALTNDFPFFLVSIFSRLRRLGTRENECDVDVDVMDLRANNCCFPVAAIINLMLP
Sbjct: 1  MNVIMIALTNDFPFFLVSIFSRLRRLGTRENECDVDVDVMDLRANNCCFPVAAIINLMLP 60

Query: 61 LCFIPMPHSAFRVSPLNDV 80
          LCFIPMPHSAFRVSPLNDV
Sbjct: 61 LCFIPMPHSAFRVSPLNDV 79

The following BLAST results are available for this feature:
BLAST of CsGy4G021930 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55140.13.3e-37100.00hypothetical protein Csa_4G637800 [Cucumis sativus][more]
BLAST of CsGy4G021930 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy4G021930 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy4G021930 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KZN4|A0A0A0KZN4_CUCSA2.2e-37100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G637800 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G021930.1CsGy4G021930.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy4G021930Csa4G637800Cucumber (Chinese Long) v2cgybcuB166
CsGy4G021930CsaV3_4G033820Cucumber (Chinese Long) v3cgybcucB171
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy4G021930Wild cucumber (PI 183967)cgybcpiB161
CsGy4G021930Wild cucumber (PI 183967)cgybcpiB169
CsGy4G021930Wild cucumber (PI 183967)cgybcpiB193
CsGy4G021930Silver-seed gourdcarcgybB0182
CsGy4G021930Silver-seed gourdcarcgybB0323
CsGy4G021930Cucumber (Chinese Long) v3cgybcucB194
CsGy4G021930Watermelon (97103) v2cgybwmbB258
CsGy4G021930Watermelon (97103) v2cgybwmbB265
CsGy4G021930Wax gourdcgybwgoB385
CsGy4G021930Wax gourdcgybwgoB398
CsGy4G021930Cucumber (Gy14) v2cgybcgybB025
CsGy4G021930Cucurbita maxima (Rimu)cgybcmaB466
CsGy4G021930Cucurbita maxima (Rimu)cgybcmaB482
CsGy4G021930Cucurbita maxima (Rimu)cgybcmaB515
CsGy4G021930Cucurbita moschata (Rifu)cgybcmoB434
CsGy4G021930Cucurbita moschata (Rifu)cgybcmoB452
CsGy4G021930Cucurbita moschata (Rifu)cgybcmoB484
CsGy4G021930Cucurbita moschata (Rifu)cgybcmoB510
CsGy4G021930Cucurbita pepo (Zucchini)cgybcpeB540
CsGy4G021930Cucurbita pepo (Zucchini)cgybcpeB537
CsGy4G021930Cucurbita pepo (Zucchini)cgybcpeB563
CsGy4G021930Cucumber (Chinese Long) v2cgybcuB158
CsGy4G021930Cucumber (Chinese Long) v2cgybcuB190
CsGy4G021930Bottle gourd (USVL1VR-Ls)cgyblsiB252
CsGy4G021930Bottle gourd (USVL1VR-Ls)cgyblsiB271
CsGy4G021930Melon (DHL92) v3.5.1cgybmeB270
CsGy4G021930Melon (DHL92) v3.6.1cgybmedB267
CsGy4G021930Watermelon (Charleston Gray)cgybwcgB259
CsGy4G021930Watermelon (Charleston Gray)cgybwcgB270
CsGy4G021930Watermelon (97103) v1cgybwmB307
CsGy4G021930Watermelon (97103) v1cgybwmB326