CsGy4G020220 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G020220
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	transmembrane protein 56-like
Location	Chr4 : 27100283 .. 27108603 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATAATAAGAGTGGATTTGTCTGGAAGGTTCGTATCGTGGTGGTTAACGCTAAGGAGCGCAGCGTAGCGTGAGAAAAGAAGACACTATTGCTTTGGGCCCAATTACCTGACCCTAATCCTTCCCTCTCTCTTTCTTCCATTCCTAACAGAAATTTCTTTTCCTCTTTCTATTGCCTTCTTCTCTTCTTCCCCATTTTCATTATCATTCCCATTTTCCGCCTTTCTTTCTACTTCTCTTTCTTCCTCCTTTAATCCTTCTCCGCTCTTCTTATTGCTTCCTGATTCTTCTCCGCCGCGTCTCCACGTTTTCCGCCGATTTTCCGGTGAGTTTTTATGGTTTTTGTGATCATCTTTTGTCATTTTTTGCTTATCGATTTGTTTTGGTTGATTTTCTGATCAAACGCGCATTTCTGTGGTGTTTTTACTTCTATTTCATTCTCTATATGAGTTTTTTGTGTGCTTAATTCTCGTTTTTGTTTTGTTTTGTTGATTTTTTTGGTTTATGTTCTTTTGCCTTATAACTTGATGTCGGAATTTATCCTTTGTCAAACTTACTTATTGCCGTTGATGTTTTTGGACGATCTCCTTCGTCTTTCGATTTTCGCGATGAGTGTGAATTTGCATTCTACTTGGTTATTTCTTTCGTTTTTCAGTGTGATTGACTTTTTTTTGGCTGCATTAGAAATTCATGACGGATTGACTTAACTTTGTGTAACTTGCGGATTGCTGTTGGTGTATTTTGATGATCTTCTTGGAGTTCCGATTTTCTTGATTAGTGTATAAATTTGAATTCTATTAGTTTTTTTATTCTATTAAAATTTATTGACGTATGTTTTCAATGTGATTGATATCTTTATAAGAGTTTAAATTAGACCGCCATTGTGAAACGTGCTGGTCACTGGTCCTTGGAAGTTGGACGTTCTCCTTTGTATTTCAGTTTTGTGATGAGTGGAAGTGTGAATTTTACATACGGTGGGACTCTGAAGCTAATTCACAATGTTTGTGTTTGGTAGTTTTGATCTTTCAGTTCTGAGGTTGTTATGTATTATCTATCTATCGTGTAGGACTTCATTGAACTGCAAGTTTATGATGGTTTAGGAGATGCTTTGTATATTCAGCCTGTGGTCTAAAGATTTTAGAAGCTTGGTTGTACTTGTTGTACATTTAGAGCTTTTGAATAAAAAGATTGTGATGTGTTATTAGAAAATTTGCAACATGCAATGTTGTTTTTACCGTGTCACAATCATCTTATCCTAGGTTTTAAATCTACTTAGCTTGTTGCATGCATCTGGAAGTTGGATGACTAAGCATTAGACCTCATAGTTCTAACATTTAAGTATTCGGCCAATTTTTTACCAGTAAAAATTGGAAATAAATTCTACACATGTTCGTTTGCTCCAATTTTGATTGAGCTGATTAGCCAAAAGGAACTACCTAAGGATCGAGAGCCAAGGGTGATCCCTCCTAAAGAGATTGTACGACAAAAAGGTTTTCCAATCTGTAATAGTAATGGAAAGATTTTATTACGAAAGACGTCTTTGTGATTTGAACTCCACCAAGAGGCCATATGTTGTATACTATAGACAAGAAGAAGTTTCAGTATTTCACGAATGGAATGAAATTTCTGCTTTGATCTTGCCAGCACACCAGTTCATGTGTCATCATGTTTGATTCTTTGTATTCTTTCTTTGGGGGTTTTAAGCAATCTTTCTACTTGGGGAATATTTGAGCATGAATACTAATATTACTTTGTGACTATTTAATTTATCTTCTGACCTGCTTCTTGCTCATTGGCGCATTATAGATTAAGAAGAATGTCAAGTGTTAACCCTTGTTAGATAACATAAAATTGTAATGAGAGATGTGACATTAAACCAAGTAAAATGCCATGGTTTGTACAAAGTTCTTTCAGTTTGCAATAGAAGCAAAAGGATTCCACCTAGATGAGTTTTGGATGGTAGAACCACTCCATTGTTCTCTTGTAGAAAAGAGGGAAACTACTAATTAATTACAAAAGTAGAGCTTCTTAAGGAAGCCTTAAATTTGATAAACCTATAGTACCTCTCCCGTCCTAGTTCCTTAACTGGGATTCTGAGAGCACTCTGCCACAACTCCCTTGCCATCTGTTTGGATGAAACCTTTTGATTTGTAGTTCCTTCACTTCGCTTATTAGTCTCTCTTATTGTCTTGGGTTGACCTTTATAGAGTGGTGAATGAGAATGATGCTCTTGTCTTAACTCTGCCAATTATGTCTAGTTTTCCTCATTAGTTGGTTAAGATGGCTTACCTTTTACTTTGAAAACAGGTGTGAATAGGCAGAGAAGAAGTTAGAGAATTTGAAGGAATTGCGCATCTTGTTTCTTTTGAAGCTGTGGCATGCTGTAACCCAAGATTGAAACAAGCGATCATGTCACTAAAGAGCCAGGCCGGGGAACTACTTAAGTATCTTGTACTATCAGATCCTGTTGTACCATATATTTCCATTCCCGCAGGCGTACTTGCTAGCAAATTGGTACCTTCCTGTCATCTATGGCTCTTTTATCTTGTTGAATGTGGGTCCCTTGCATGCGACTTTATCTTCAATGCAATCATCATGATGTTAAAAGGTTGATAATATGCTTGTAGTTAGTTTCTTTTCTCTTTGTGAGTTTGCATGTGAAGTTCTTCTTCTTTGTATTTATTTCTGCATCATTTGTAATTCATCCTATGGTTTCCAGGTCTATGATCTTACTGATATGATAAGCAGTGTTTACTTCAAGAGCTATTCAAATCTTTCTAGGATTCAGCGGGTGGAGTGGAACAACCGGTACATGATCATCCCCTTCTTTGCATTGGTTTATTTCTTTTTTCTTTGTAATATGTTTTTGTGTTTGCTGTTTTTACAGGGCAATGTCAACTGTCCATGCCATTTTCATCACAGCAGCAGCATTATACATGGTGTTTTTATCAGATCTCTACTCTGACCAATATTTTGGCCCTATTACCTTTCGTAATTCAACAATATCTACATTTGGCCTGGGAGTAAGTGCACTCTTTGTACTAAATTCATATATATGAGTAGGTATATTATCATAGAGTGAGAAATTTTGTCTTATGCTGGAAATGTTAAGGGCCTCCCTCAACTTTGTGAAGCTTATAGACTATAGTATGGTAACAATAAAGATGGAAGATTTGTCTAGTCAAAATAAAATTAAAAAAAAAAGATGAAGATTTTTGTTTCAGAGGATGGTTCTTGAAAGAATATGCCCTGATCAGGTCCTAAGAATTAGGATCGAAACCTGAAAGGAAATGTATACCTTTGAGATTTAAGACTCATAAAACTTTTTTTGGGTGGAGCAAATGATATAGATCATTGGTACTTCCCTATCAAGTTTTTGGTCATAATAATTGTTTATATTATTAAATTTGACATCACCTATTAGCTTAAGCTTTTTGGATGAATTCGTGATTTAAGATGGTATCAGAGCCAAGTGGTCCAAGAAGGTCTTGTGTTCAAACTCTTGCAACGTTATTTCCTCCCCATTTAATATGGATTCCCACTTGTTGGGTTTTTATTGATATCTTAAGCCCATATGTGAGGGGGAGTGTTAGATATTATATTAAATTTGTCATCACCTATCAACTTAAGTTTTTGGGATGAATTGGTGATTTAAGAAACTTAAGTTTCTCACTGAGAGGATAACAGTGGTATTAAGCTTTATTTATGAGGAAGTATTGCATGGAAAGTTCGAAGGGGGACAGAGAGCAGTGTGAATTTGGCATTTTGATAATTAGAACTCTCGACTGAAATAATATATAGGCTGAAAATGTGTTATCGAACAATCTAAAAATCTATGTTGATTATTGAAAATTGTATCCAAAGAAACATGACACGTTGTTAACCACCATGACTTGTCATAGTGGTCAACAGATGTTTGTGTAAATAATAAAGGATTAAAAGAGAATAAATTCGAGTCATGTGCCCACCTTTCTAGGATTTGATATTCTAGAAGCTACCCTAGATGAAACATAGTTCAAAGTGTTGCTGTGTTCTAGAGAATGATAGAAGCTTAGAAGTAAGAGCACCTGAAAAATAATGCTTTGAAACCAATTTAAATTTAAATATAACCTTTATTTCTGCATTAAAGTTTTCTTAAGCTACTTGATAGTTGATCTCAAATGTTATGTGTAGGGTGGATAACATGTGGGCTTTTTTGGAGATGTTACGTTAGGAGAACATTATTCAATTCTTCAAACAGCTGTTCTTATTACTTTGAAAATTTAGTTGTTTTATTATATTCGGAAGAGGATTTCAAGTAGTGCGTTAAAAGGGTCTAGTAAAAACCTTTGGATGACCGTAGTCTTGGGTTGTCCTTTGTTTTACAGTTTGTTAAATGTTACATGGGATTGGTCTAATATTTACTTTTGTAAGGATTTTTGGCTGTGTTAAGCCCGCTATGATTTTCCCCTTCCTTTTATCATCCGCCTGAAATGAGGTTTCACTTGGTCACTTCTATTCTACGTCCCTCAGAGTCTCCACCTTTTTTATTTTGGGTTTTCGTCATCCTCTCATTGATAGTGAGTTTTTGGAGGTTGTGGTTCTTCTTCCTATTGTTTCCGATAAGAGGTTTGTTGTTGGGATAAGAGATGTTTGGGTATGGATGGCTCCCTAGTCTATCTGAGGAATTTTTGTGTCGTTCCTTTTTCTTTTCCCTCAGTTCTCTTCCCATTTAGGGCTTAAGTTTTTTTTCTTCTCTTTGGAAGGTAAGAGTTCCTAAGAAAGTGGAGTTTTTTGCTTGAGAAGTACTACTCACTAGAGTGAGTGGTGAACACCGATTCTTTTCTTCTGTCTTGTCGTGTCCTTATCTTAGGTTTCGTTTGGAGGAGGATCTTGACCATCTTTTGTGGGGTTGTGAGTTTGCTTTTTCTCTTTGGAGTTGTCTTTTTTAGGTATTTGGTGTCGACTTTTGTTACATAATGGAGGAGATTTTTAATGAAAATTTCCTTTCGTGACAAGGGAGTAGTCTTGTACCAAGCTTGTTTTTGTGTTATTTTGTGGGGAGTAGCTCAAGAGGAAGCTTTTAACTTTTCAAACTTTTCAAACAAGTGTGGGAAGCAGTGAGGTGTTTAATGCGTTTTTTTTGGGTGTTTGTTAATCGGACTTTTTTGTAATTTTTGGTTGGCGTTATTCTTTTGGATTGGAGTCCGTTCCTGTAGTATTTTAGGACTCCTTTTTCTGTTCTAGTTTTCTATCTGTGTTAGACTTAAAATTTTGTCAGTCTAAACATAGTTTAGTGGTTAAAGCATCTAATCTACTGCTATCATAAAATCATTTCTTCAACCATTTCCCCAGTAATTATTAAACTCGGGATAGACTTAAGTTTTGATGACGCTACTGCAGGTGTCTGTCGGTTACTTCATAACCGATCTCGTGATGATCCTTTGGTTTTACCCTGCAATTGGTGGAATGGAGTATGTAAGTGCATTCTACTTTTTAAATATTACAAGCTATTTGTATGTTCCCGTCATCTTATCTTGTGTTCTTCAGGGAAAAAAAACGTGGAAAATTCGTTGTTGACAATGTGTTTTTATTTTTTCAGGTGATACACCATCTTCTTTCTCTCTTAGCTGTGGCCTATGCCATGTTGACTGGTGAGGGGCAGCTTTACACCTACATGGTTCTCATCTCTGAGACAACTACCCCTGGGATCAATTTGAGATGGTAATTTGCCCTTAAAAAGTTTATGTTAAAATCCCATTTTGGTCCTTGTATTTCCAAGTTTCTTCAATTTTAGTCCTTGTCTTTTTAATGAAAACTCAAATTTATTCGATATTGTTAAACTTTTTTGAAATGTTTTTATTATCTATTAGCATTTCTGAATAAATTTTGACAACTTATTCACATTTTATAGTTTCTTGCATGAAAACTACTGTCATTAATTAGCCAATTCTGATAAAAAATAAGTTTGAGGAACTAAAATTGTACCAAATTTAAATTACTGGAGGGGAGAAAATGATATTTTAAGGAAAATTATAATTATGAAGTGAAATAGTGTGTTGATTTTGACTTGGAATTTGTTCATACATCCTCAGAATATAGTTTATTTTCTAAAATAAATTTTTGTGCGTAGGTACCTTGATACAGCTGGAATGAAGAAGTCAAAAGCATACCTCATAAATGGAATTGTTATATTCTTCGCGTGGCTGGTGAGTAACAAAAATTAATCTTATTATTTATATATGTATTTTTTTTATATATTTTTTTGGATATTTTCAAAATATAGCAAAATATAACAAAATAATGGATAGATTGTGATATTTTGTTAGTTTTATAGACACTTTTGGAAGTTTTTGTCATATAAAATAAAATTTCATTTATTTTTCTATATCTAATAACTTCTATAATATGTATTTTTGTAAGCAGTTTGGACTAATATGAATATATATATATATATATATAATATATATATATATATATATATATATATATATATATATATATATTTTGTTGTTCAGGTCGCGAGAATTCTGTTGTTCATGTACATGTTTTACCATGTCTACTTACACTTGAATCAGGTATAATCAATCTCTAAGCTATTTGTTGAAGTTATTGGATTTACTACTCTTACTGTTTTGCTCATTTATTGGCAAAAATGCATTTTCAATCTTTTACTTCCTTTATTATCATTTCTATCCATCACATCTACTCTAAGTTTTTTTTTCTTGTTACCTTTCCATTGCCACTTTACCTTTTTTTTTTTTAATATCCATGTTTACACCCACCTTTTTTTTTTTTTAAATATCCATGTTTACATCTACCCGACTAATCTCATGGAACAATCTACTTGATTCTTCCTGCAACATATTGTGATGATTAGTAGTGTGTTATTATATATATGTACTTCACTTTCAATAAAATTTGATAAGGATTTATGTCTTGATTTGCTTAAATTAAAAAAAAAAAAAAAACAATGCATTTTTTATTTTATTTTTTTTGTGTGGCCATTAACAGGTTTTGCAGATGCACGTTTTTGGGCAATTTTTGGTGTTCGTGGTTCCATCGATATTATGGATCATGAACTTGACGTGGTTCTCTAAAATATTTAGAGGATTGAAAAAGACATTGGCAAAGAGGCAATGAAAACCCAAATAGTCTATACATACTATTTGGAACCAACCAGCATTGTGATGAGTGACATAAAAGGGAAGGTAGTTCAAATTATTAAAAGCTTCTCTTCTCTGCTTCCCCTCCCACCTCCCCACCTTCCACCTCCCCCCTCCCCCTCCCCCTCCCCCACTTTGTACATCTCCAACTTTCATAATTTGTACAATTTCATGTTAAAATTAAGTACATAGATAGCCATTTCTACTAGGAAAAAAGAAAAGAAAAAAAAAGAAAAGAGAAGAATTAGCATAATTTTAATGTCATTATGATTGTTTATTGTAGATTATAGGAAAAGGATTTCTTCTTCTTCTTTTTCTTTTTTCACTCCTTAATTTCATGCCTTGCTTTTGTTGATAATATTTTAATGTTCGTATTTAATTTATTTGTTCCATGAACCTCAAAATGTTTAATAAGTCATACTTATATTGTGTATGTTTTTAGCAAGTTTTTAAACTTTTAAACAATCTAAAAGCCCCTCTTGTAGTTCATTGAAACCTTAATTAAATTTGTAGTTGAATGAGAATATATGTTAACCTGACATTAGATGTATATTTCTTTTTAATGAACAAACAAACAAAACTTTTGACATGTAATCTAACATAAAATATGGGTAAAGCTATGAATATAATGGAAGAGTTTAAGGTTTCTCATATGGTTAGGTCCAAATTGATATGATGGTGAGGATGGGGGAAATCTTTCAGCTTTACAAACTTAAAATTGAGTTGGGAAATGGAGGACAGAGAATTGGAATTGGAATTGGAAGAGGAGGTGTTGTTATCTTGATTATCACTTAACTGTCTCTCTACAATTTGCTGTGTCATCGAGGGTTTGAGGGACAATGTGAGTTCACAATCACATGTTTGGTCCTCTAACATCGACTCCCCGACGCATTCCTCCTCCGACTCTGACTCTGATTCTGAATCCTACAAATGTTTCAATTTGCAAATTTCCGTTATTATTTCATTTCATTTCATGTTCACGGTTATTTGGAAGTTCTATATCTCATGAGATAATTTAGTTTCTAGTTTTCAACTTTGAAACAGTAATTATATATTTAAAATTTCAAATCAATTACGTTTATCAAAACTTTAAAATTGAAATTTTACATATAAATTAATAATATGTATTAGGATTATTTTCAAAATTAGAAAAAAAGAAAAGAAAAGAAAAGA

mRNA sequence

ATGAAAATAATAAGAGTGGATTTGTCTGGAAGAGAAGAAGTTAGAGAATTTGAAGGAATTGCGCATCTTGTTTCTTTTGAAGCTGTGGCATGCTGTAACCCAAGATTGAAACAAGCGATCATGTCACTAAAGAGCCAGGCCGGGGAACTACTTAAGTATCTTGTACTATCAGATCCTGTTGTACCATATATTTCCATTCCCGCAGGCGTACTTGCTAGCAAATTGGTCTATGATCTTACTGATATGATAAGCAGTGTTTACTTCAAGAGCTATTCAAATCTTTCTAGGATTCAGCGGGTGGAGTGGAACAACCGGGCAATGTCAACTGTCCATGCCATTTTCATCACAGCAGCAGCATTATACATGGTGTTTTTATCAGATCTCTACTCTGACCAATATTTTGGCCCTATTACCTTTCGTAATTCAACAATATCTACATTTGGCCTGGGAGTGTCTGTCGGTTACTTCATAACCGATCTCGTGATGATCCTTTGGTTTTACCCTGCAATTGGTGGAATGGAGTATGTGATACACCATCTTCTTTCTCTCTTAGCTGTGGCCTATGCCATGTTGACTGGTCGCGAGAATTCTGTTGTTCATGTACATGTTTTACCATGTCTACTTACACTTGAATCAGGTTTTGCAGATGCACGTTTTTGGGCAATTTTTGGTGTTCGTGGTTCCATCGATATTATGGATCATGAACTTGACGTGGTTCTCTAAAATATTTAGAGGATTGAAAAAGACATTGGCAAAGAGGCAATGAAAACCCAAATAGTCTATACATACTATTTGGAACCAACCAGCATTGTGATGAGTGACATAAAAGGGAAGGTAGTTCAAATTATTAAAAGCTTCTCTTCTCTGCTTCCCCTCCCACCTCCCCACCTTCCACCTCCCCCCTCCCCCTCCCCCTCCCCCACTTTGTACATCTCCAACTTTCATAATTTGTACAATTTCATGTTAAAATTAAGTACATAGATAGCCATTTCTACTAGGAAAAAAGAAAAGAAAAAAAAAGAAAAGAGAAGAATTAGCATAATTTTAATGTCATTATGATTGTTTATTGTAGATTATAGGAAAAGGATTTCTTCTTCTTCTTTTTCTTTTTTCACTCCTTAATTTCATGCCTTGCTTTTGTTGATAATATTTTAATGTTCGTATTTAATTTATTTGTTCCATGAACCTCAAAATGTTTAATAAGTCATACTTATATTGTGTATGTTTTTAGCAAGTTTTTAAACTTTTAAACAATCTAAAAGCCCCTCTTGTAGTTCATTGAAACCTTAATTAAATTTGTAGTTGAATGAGAATATATGTTAACCTGACATTAGATGTATATTTCTTTTTAATGAACAAACAAACAAAACTTTTGACATGTAATCTAACATAAAATATGGGTAAAGCTATGAATATAATGGAAGAGTTTAAGGTTTCTCATATGGTTAGGTCCAAATTGATATGATGGTGAGGATGGGGGAAATCTTTCAGCTTTACAAACTTAAAATTGAGTTGGGAAATGGAGGACAGAGAATTGGAATTGGAATTGGAAGAGGAGGTGTTGTTATCTTGATTATCACTTAACTGTCTCTCTACAATTTGCTGTGTCATCGAGGGTTTGAGGGACAATGTGAGTTCACAATCACATGTTTGGTCCTCTAACATCGACTCCCCGACGCATTCCTCCTCCGACTCTGACTCTGATTCTGAATCCTACAAATGTTTCAATTTGCAAATTTCCGTTATTATTTCATTTCATTTCATGTTCACGGTTATTTGGAAGTTCTATATCTCATGAGATAATTTAGTTTCTAGTTTTCAACTTTGAAACAGTAATTATATATTTAAAATTTCAAATCAATTACGTTTATCAAAACTTTAAAATTGAAATTTTACATATAAATTAATAATATGTATTAGGATTATTTTCAAAATTAGAAAAAAAGAAAAGAAAAGAAAAGA

Coding sequence (CDS)

ATGAAAATAATAAGAGTGGATTTGTCTGGAAGAGAAGAAGTTAGAGAATTTGAAGGAATTGCGCATCTTGTTTCTTTTGAAGCTGTGGCATGCTGTAACCCAAGATTGAAACAAGCGATCATGTCACTAAAGAGCCAGGCCGGGGAACTACTTAAGTATCTTGTACTATCAGATCCTGTTGTACCATATATTTCCATTCCCGCAGGCGTACTTGCTAGCAAATTGGTCTATGATCTTACTGATATGATAAGCAGTGTTTACTTCAAGAGCTATTCAAATCTTTCTAGGATTCAGCGGGTGGAGTGGAACAACCGGGCAATGTCAACTGTCCATGCCATTTTCATCACAGCAGCAGCATTATACATGGTGTTTTTATCAGATCTCTACTCTGACCAATATTTTGGCCCTATTACCTTTCGTAATTCAACAATATCTACATTTGGCCTGGGAGTGTCTGTCGGTTACTTCATAACCGATCTCGTGATGATCCTTTGGTTTTACCCTGCAATTGGTGGAATGGAGTATGTGATACACCATCTTCTTTCTCTCTTAGCTGTGGCCTATGCCATGTTGACTGGTCGCGAGAATTCTGTTGTTCATGTACATGTTTTACCATGTCTACTTACACTTGAATCAGGTTTTGCAGATGCACGTTTTTGGGCAATTTTTGGTGTTCGTGGTTCCATCGATATTATGGATCATGAACTTGACGTGGTTCTCTAA

Protein sequence

MKIIRVDLSGREEVREFEGIAHLVSFEAVACCNPRLKQAIMSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRVEWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITDLVMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGRENSVVHVHVLPCLLTLESGFADARFWAIFGVRGSIDIMDHELDVVL

Homology

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BLAST of CsGy4G020220 vs. NCBI nr
Match: XP_011653984.1 (PREDICTED: transmembrane protein 56-like isoform X1 [Cucumis sativus])

HSP 1 Score: 295.0 bits (754), Expect = 2.2e-76
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 41  MSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRV 100
           MSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRV
Sbjct: 1   MSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRV 60

Query: 101 EWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITDL 160
           EWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITDL
Sbjct: 61  EWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITDL 120

Query: 161 VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTG 194
           VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTG
Sbjct: 121 VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTG 153

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BLAST of CsGy4G020220 vs. NCBI nr
Match: KGN54944.1 (hypothetical protein Csa_4G614180 [Cucumis sativus])

HSP 1 Score: 295.0 bits (754), Expect = 2.2e-76
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 41  MSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRV 100
           MSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRV
Sbjct: 1   MSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRV 60

Query: 101 EWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITDL 160
           EWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITDL
Sbjct: 61  EWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITDL 120

Query: 161 VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTG 194
           VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTG
Sbjct: 121 VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTG 153

[Close]

BLAST of CsGy4G020220 vs. NCBI nr
Match: XP_008466799.1 (PREDICTED: transmembrane protein 56-like [Cucumis melo] >XP_008466800.1 PREDICTED: transmembrane protein 56-like [Cucumis melo])

HSP 1 Score: 284.6 bits (727), Expect = 3.0e-73
Identity = 147/153 (96.08%), Postives = 151/153 (98.69%), Query Frame = 0


Query: 41  MSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRV 100
           MSLKSQA +LLKYLVLSDPVVPYISIPAGVLASKLVYDLTD+IS VYFKSYSNLSRIQRV
Sbjct: 1   MSLKSQAEQLLKYLVLSDPVVPYISIPAGVLASKLVYDLTDLISGVYFKSYSNLSRIQRV 60

Query: 101 EWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITDL 160
           EWNNRAMSTVHAIFITAAALYMVFLSDLYSD+YFGPITFR+STISTFGLGVSVGYFITDL
Sbjct: 61  EWNNRAMSTVHAIFITAAALYMVFLSDLYSDRYFGPITFRSSTISTFGLGVSVGYFITDL 120

Query: 161 VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTG 194
           VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTG
Sbjct: 121 VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTG 153

[Close]

BLAST of CsGy4G020220 vs. NCBI nr
Match: XP_022141361.1 (transmembrane protein 56-like [Momordica charantia] >XP_022141369.1 transmembrane protein 56-like [Momordica charantia])

HSP 1 Score: 263.8 bits (673), Expect = 5.5e-67
Identity = 137/156 (87.82%), Postives = 148/156 (94.87%), Query Frame = 0


Query: 41  MSLKS---QAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRI 100
           MSLKS   QA +LLKYLVLSDP+VPYISIPAG+LASKLV+DLTD IS+VYFKSYSNLSRI
Sbjct: 1   MSLKSYQNQAEQLLKYLVLSDPIVPYISIPAGILASKLVHDLTDSISAVYFKSYSNLSRI 60

Query: 101 QRVEWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFI 160
           QRVEWNNRAMST+HAIFITAAALY+VFLSDLYSDQ+FG ITFR+STISTF LGVSVGYFI
Sbjct: 61  QRVEWNNRAMSTLHAIFITAAALYLVFLSDLYSDQHFGLITFRSSTISTFALGVSVGYFI 120

Query: 161 TDLVMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTG 194
           TDLVMI WFYPA+GGMEYVIHHLLSL+AVAYAMLTG
Sbjct: 121 TDLVMIFWFYPALGGMEYVIHHLLSLIAVAYAMLTG 156

[Close]

BLAST of CsGy4G020220 vs. NCBI nr
Match: XP_022940088.1 (transmembrane protein 56-like [Cucurbita moschata] >XP_022940089.1 transmembrane protein 56-like [Cucurbita moschata] >XP_022940090.1 transmembrane protein 56-like [Cucurbita moschata] >XP_022940091.1 transmembrane protein 56-like [Cucurbita moschata] >XP_022940092.1 transmembrane protein 56-like [Cucurbita moschata] >XP_023525630.1 transmembrane protein 56-like [Cucurbita pepo subsp. pepo] >XP_023525631.1 transmembrane protein 56-like [Cucurbita pepo subsp. pepo] >XP_023525633.1 transmembrane protein 56-like [Cucurbita pepo subsp. pepo] >XP_023525634.1 transmembrane protein 56-like [Cucurbita pepo subsp. pepo] >XP_023525635.1 transmembrane protein 56-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260.0 bits (663), Expect = 8.0e-66
Identity = 133/155 (85.81%), Postives = 147/155 (94.84%), Query Frame = 0


Query: 39  AIMSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQ 98
           ++ S +SQA +LLKYLVLSDPVVPYISIPAG+LASKLVYDLTD+IS VYFKSYSNLSRIQ
Sbjct: 2   SLKSYQSQAEQLLKYLVLSDPVVPYISIPAGILASKLVYDLTDLISGVYFKSYSNLSRIQ 61

Query: 99  RVEWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFIT 158
           R+EWNNRAMST+HAIFITAA+LYMVFLSDLYSD+YFG ITFR+STISTF LGVSVGYFIT
Sbjct: 62  RMEWNNRAMSTLHAIFITAASLYMVFLSDLYSDRYFGFITFRSSTISTFCLGVSVGYFIT 121

Query: 159 DLVMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTG 194
           DL MI WFYP++GGMEYVIHHLLSL+AVAYAMLTG
Sbjct: 122 DLGMISWFYPSLGGMEYVIHHLLSLVAVAYAMLTG 156

[Close]

BLAST of CsGy4G020220 vs. TAIR10
Match: AT4G19645.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein)

HSP 1 Score: 173.3 bits (438), Expect = 1.8e-43
Identity = 89/174 (51.15%), Postives = 125/174 (71.84%), Query Frame = 0


Query: 40  IMSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQR 99
           I S ++QA   +++ +L+DP +PY S+  G+   KLVYDLT++ SS++ KSYS L++I+R
Sbjct: 3   IKSYQNQAEYFVEHYLLADPFLPYTSVLVGICLCKLVYDLTELFSSIHVKSYSALTKIKR 62

Query: 100 VEWNNRAMSTVHAIFITAAALYMVFLSDLYSDQ-YFGPIT-FRNSTISTFGLGVSVGYFI 159
           +EWNNR +STVHAIFI+  ALY  F SDL+SDQ     +T FRNS +STFGLGVSVGYF+
Sbjct: 63  IEWNNRGISTVHAIFISFMALYFAFFSDLFSDQRSLETLTVFRNSPLSTFGLGVSVGYFL 122

Query: 160 TDLVMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGRENSVVHVHVLPCLLTLE 212
            DL MI W YP++GG EY++HH LS  AVAY++ +G      ++ ++  + T E
Sbjct: 123 ADLGMIFWLYPSLGGSEYILHHCLSGTAVAYSLFSGEAQLYTYMVLISEVTTPE 176

[Close]

BLAST of CsGy4G020220 vs. TAIR10
Match: AT1G31300.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein)

HSP 1 Score: 166.4 bits (420), Expect = 2.2e-41
Identity = 83/174 (47.70%), Postives = 123/174 (70.69%), Query Frame = 0


Query: 39  AIMSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQ 98
           AI S   QA  L+K  +L+DP +PY S+  G+   K+VYDL   IS+ + K+Y  L++IQ
Sbjct: 11  AIKSYHHQAQHLVKNYLLADPFIPYTSVLTGIFLCKVVYDLCHFISNSHSKTYIILTKIQ 70

Query: 99  RVEWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGP-ITFRNSTISTFGLGVSVGYFI 158
           R+EWNNR +STVHAIFI+A +LY VF SDL+SD++    + FR+S +S+ GLG+S+GYF+
Sbjct: 71  RIEWNNRGISTVHAIFISAMSLYFVFWSDLFSDRWHNDLVVFRSSRLSSLGLGISIGYFL 130

Query: 159 TDLVMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGRENSVVHVHVLPCLLTLE 212
            DL MI W YP++GG+EY++HH LS +AVAY++ +G      ++ ++  + T E
Sbjct: 131 ADLGMIFWKYPSLGGIEYIVHHSLSGVAVAYSLFSGEGQLYTYMVLISEITTPE 184

[Close]

BLAST of CsGy4G020220 vs. TAIR10
Match: AT4G10360.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein)

HSP 1 Score: 117.1 bits (292), Expect = 1.5e-26
Identity = 56/141 (39.72%), Postives = 88/141 (62.41%), Query Frame = 0


Query: 65  SIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRVEWNNRAMSTVHAIFITAAALYMVF 124
           SI +G L  K+VYDLT  IS + F  Y  L    R+EWNNR  ST HA+F + A++Y + 
Sbjct: 20  SICSGALMCKIVYDLTRFISPLLFSVYGKLDSKVRMEWNNRGFSTFHAVFTSVASIYFLV 79

Query: 125 LSDLYSDQYFGPITFRNST-ISTFGLGVSVGYFITDLVMILWFYPAIGGMEYVIHHLLSL 184
           +SD + +   G     ++T +S   +G+S+GYF+ DL MI W++P +GG+EYV HH LS+
Sbjct: 80  ISDQFDENVHGDSVINSTTRLSESVMGISLGYFLADLAMIFWYFPTLGGIEYVFHHFLSM 139

Query: 185 LAVAYAMLTGRENSVVHVHVL 205
            A+  ++ +G+    + + +L
Sbjct: 140 FAIILSVTSGQSQFYIFLVLL 160

[Close]

BLAST of CsGy4G020220 vs. Swiss-Prot
Match: sp|Q8CGF5|TMM56_MOUSE (Transmembrane protein 56 OS=Mus musculus OX=10090 GN=Tmem56 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.2e-10
Identity = 45/157 (28.66%), Postives = 84/157 (53.50%), Query Frame = 0


Query: 70  VLASKLVYDLTDMISSVYFKS-----YSNLSRIQRVEWNNRAMSTVHAIFITAAALYMVF 129
           V +S +V+ +     S +F +     Y++LS  +++EWN+R +ST H++ +    LY+ F
Sbjct: 25  VCSSFVVFQILFHFVSYWFSARVSSGYNSLSIDKKIEWNSRVVSTCHSLLVGIFGLYLFF 84

Query: 130 LSD-LYSDQYFGPITFRNSTISTFGLGVSVGYFITDLVMILWFYPAIGGMEYVIHHLLSL 189
             +   +D  +G  T+ N  I+T     + GY I+DL++IL+ +  IG   ++IHH   L
Sbjct: 85  FDEATITDPLWGDPTYVNINIAT-----ASGYLISDLLIILFNWKVIGDKFFIIHHCAGL 144

Query: 190 LAVAYAMLTGRENSVVHVHVLPCLLTLESGFADARFW 221
            A  + + TG   ++ ++     L  L S F + R++
Sbjct: 145 TAYYFVLTTG---ALAYIANFRLLAELSSPFVNQRWF 173

[Close]

BLAST of CsGy4G020220 vs. Swiss-Prot
Match: sp|Q6PGS5|TM56B_XENLA (Transmembrane protein 56-B OS=Xenopus laevis OX=8355 GN=tmem56-b PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.2e-08
Identity = 36/135 (26.67%), Postives = 71/135 (52.59%), Query Frame = 0


Query: 59  PVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRVEWNNRAMSTVHAIFITAA 118
           P+  +IS+ +  +   L +  +  +S+     +  LS  Q++EWN+R +S+ HA+ +   
Sbjct: 6   PLTVFISVTSLAVFQFLFHVGSSWLSTRLTGGFHKLSARQKIEWNSRTVSSFHALVVGCF 65

Query: 119 ALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITDLVMILWFYPAIGGMEYVIH 178
            LY++    +Y D       + +  +    + V+ GY I+DL++I++++  IG   +V H
Sbjct: 66  CLYIL----VYDDAVNADPVWGDPFMVKLNVAVTSGYLISDLLLIIYYWKEIGDKYFVTH 125

Query: 179 HLLSLLAVAYAMLTG 194
           HL +L A  Y +  G
Sbjct: 126 HLAALYACYYVLGEG 136

[Close]

BLAST of CsGy4G020220 vs. Swiss-Prot
Match: sp|Q96MV1|TMM56_HUMAN (Transmembrane protein 56 OS=Homo sapiens OX=9606 GN=TMEM56 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.7e-06
Identity = 38/148 (25.68%), Postives = 76/148 (51.35%), Query Frame = 0


Query: 75  LVYDLTDMISSVYFKSYSNLSRIQRVEWNNRAMSTVHAIFITAAALYMVFLSD--LYSDQ 134
           L Y ++   S+     +++LS  +++EWN+R +ST H++ +    LY +FL D    +D 
Sbjct: 22  LFYFVSYWFSAKVSPGFNSLSFKKKIEWNSRVVSTCHSLVVGIFGLY-IFLFDEATKADP 81

Query: 135 YFGPITFRNSTISTFGLGVSVGYFITDLVMILWFYPAIGGMEYVIHHLLSLLAVAYAMLT 194
            +G       +++   + ++ GY I+DL +I+ ++  IG   +++HH  SL A    +  
Sbjct: 82  LWG-----GPSLANVNIAIASGYLISDLSIIILYWKVIGDKFFIMHHCASLYAYYLVLKN 141

Query: 195 GRENSVVHVHVLPCLLTLESGFADARFW 221
           G    + ++     L  L S F + R++
Sbjct: 142 G---VLAYIGNFRLLAELSSPFVNQRWF 160

[Close]

BLAST of CsGy4G020220 vs. Swiss-Prot
Match: sp|Q5XIY2|TM56B_DANRE (Transmembrane protein 56-B OS=Danio rerio OX=7955 GN=tmem56b PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 8.2e-06
Identity = 29/115 (25.22%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 79  LTDMISSVYFKSYSNLSRIQRVEWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPIT 138
           ++ ++SS + + Y  L   +  +WN+R +STVHA+ +    LY+++  D  ++    P+ 
Sbjct: 23  VSPVLSSNFTQGYGKLPPNKLNDWNSRLVSTVHALIVGLFCLYILWYDDAVNED---PV- 82

Query: 139 FRNSTISTFGLGVSVGYFITDLVMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTG 194
           + +  +    + ++ GY   DL+++   +  +G + +V HHL +L A  Y +  G
Sbjct: 83  WGDPNLVKLNVAITCGYLFYDLLLLACNWSTMGDVFFVCHHLAALYAYGYVLTRG 133

[Close]

BLAST of CsGy4G020220 vs. Swiss-Prot
Match: sp|Q6GLX2|TM56A_XENLA (Transmembrane protein 56-A OS=Xenopus laevis OX=8355 GN=tmem56-a PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.7e-04
Identity = 32/140 (22.86%), Postives = 70/140 (50.00%), Query Frame = 0


Query: 56  LSDPVVPYISIPAGVLASKLVYD-LTDMISSVYFKSYSNLSRIQRVEWNNRAMSTVHAIF 115
           + D ++ Y  +    L  +L++  ++  + + Y  +Y  LS  ++ EW++R +ST HA+ 
Sbjct: 1   MDDVLISYCVVTGSFLGFQLLFSAISPRLFTKYSSTYRQLSFGKQCEWDSRFVSTNHALI 60

Query: 116 ITAAALYMVFLSD-LYSDQYFGPITFRNSTISTFGLGVSVGYFITDLVMILWFYPAIGGM 175
           + +A LY++   D + +D  +G   +    ++     ++ GY + DL+++  F+  +   
Sbjct: 61  VGSACLYILAYDDAVNADPIWGDPFWVKMNVA-----ITCGYLVQDLLLLARFWKVMRDP 120

Query: 176 EYVIHHLLSLLAVAYAMLTG 194
             V HHL    +  Y +  G
Sbjct: 121 YMVCHHLAVFYSYGYVLNRG 135

[Close]

BLAST of CsGy4G020220 vs. TrEMBL
Match: tr|A0A0A0L1M1|A0A0A0L1M1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G614180 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.5e-76
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 41  MSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRV 100
           MSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRV
Sbjct: 1   MSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRV 60

Query: 101 EWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITDL 160
           EWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITDL
Sbjct: 61  EWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITDL 120

Query: 161 VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTG 194
           VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTG
Sbjct: 121 VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTG 153

[Close]

BLAST of CsGy4G020220 vs. TrEMBL
Match: tr|A0A1S3CS93|A0A1S3CS93_CUCME (transmembrane protein 56-like OS=Cucumis melo OX=3656 GN=LOC103504121 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.0e-73
Identity = 147/153 (96.08%), Postives = 151/153 (98.69%), Query Frame = 0


Query: 41  MSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQRV 100
           MSLKSQA +LLKYLVLSDPVVPYISIPAGVLASKLVYDLTD+IS VYFKSYSNLSRIQRV
Sbjct: 1   MSLKSQAEQLLKYLVLSDPVVPYISIPAGVLASKLVYDLTDLISGVYFKSYSNLSRIQRV 60

Query: 101 EWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITDL 160
           EWNNRAMSTVHAIFITAAALYMVFLSDLYSD+YFGPITFR+STISTFGLGVSVGYFITDL
Sbjct: 61  EWNNRAMSTVHAIFITAAALYMVFLSDLYSDRYFGPITFRSSTISTFGLGVSVGYFITDL 120

Query: 161 VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTG 194
           VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTG
Sbjct: 121 VMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTG 153

[Close]

BLAST of CsGy4G020220 vs. TrEMBL
Match: tr|A0A2P5BTG4|A0A2P5BTG4_PARAD (TRAM/LAG1/CLN8 domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_211960 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.6e-51
Identity = 120/251 (47.81%), Postives = 153/251 (60.96%), Query Frame = 0


Query: 40  IMSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQR 99
           I S + QA +LLK   L+DPV+PY+SI  G+ A K+VYDLT +ISSV+FKSYS+LS+IQR
Sbjct: 3   IKSYQDQAEQLLKEYALADPVIPYVSIIGGIFACKMVYDLTQLISSVHFKSYSSLSKIQR 62

Query: 100 VEWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYF-GPITFRNSTISTFGLGVSVGYFIT 159
            EWNNRAMSTVHA+FIT  +LY VF SDLYSD    G +T ++S +STF LGVSVGYF+T
Sbjct: 63  TEWNNRAMSTVHAVFITVMSLYFVFWSDLYSDDLLAGLVTLQSSPLSTFVLGVSVGYFLT 122

Query: 160 DLVMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTGR------------------------ 219
           DL MI WFY  +GG+EYV+HHLLS++++AYAMLTG                         
Sbjct: 123 DLGMIFWFYCDLGGLEYVVHHLLSIVSLAYAMLTGEVQLYTYMVLISETTTPGINLRWYL 182

Query: 220 --------------------------ENSVVHVHVLPCLLTLESGFADARFWAIFGVRGS 240
                                     +N+ VH+ +L  LL L SG  D+    +F  RG+
Sbjct: 183 DTVGMKRSRAYVINGVVIFLSWLVGCQNTPVHISILSPLLALRSGQTDSVVRTVFSNRGA 242

[Close]

BLAST of CsGy4G020220 vs. TrEMBL
Match: tr|A0A2P4JJZ4|A0A2P4JJZ4_QUESU (Transmembrane protein 56 OS=Quercus suber OX=58331 GN=CFP56_61663 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 2.0e-49
Identity = 104/154 (67.53%), Postives = 125/154 (81.17%), Query Frame = 0


Query: 40  IMSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQR 99
           I S ++ A +LLK  VL+D  +P  SI  G+ ASK+VYDLT  IS++YFKSY++LS++QR
Sbjct: 11  ITSYQNHAEQLLKDYVLADSFIPCTSIIGGIFASKVVYDLTQTISAIYFKSYASLSKMQR 70

Query: 100 VEWNNRAMSTVHAIFITAAALYMVFLSDLYSDQYFGPITFRNSTISTFGLGVSVGYFITD 159
           VEWNNRA+ST+HAIFIT  +LY VF SDLYSDQ+ G IT R S +STF LGVSVGYF+ D
Sbjct: 71  VEWNNRAISTLHAIFITTISLYFVFWSDLYSDQFAGLITLRRSQLSTFALGVSVGYFLAD 130

Query: 160 LVMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTG 194
           L MILWFYPA+GG EYVIHHLLS+ AVAYAMLTG
Sbjct: 131 LGMILWFYPALGGFEYVIHHLLSIAAVAYAMLTG 164

[Close]

BLAST of CsGy4G020220 vs. TrEMBL
Match: tr|A0A1I9W0B4|A0A1I9W0B4_POPTO (TRAM, LAG1 and CLN8 lipid-sensing domain-containing protein OS=Populus tomentosa OX=118781 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.0e-48
Identity = 100/156 (64.10%), Postives = 126/156 (80.77%), Query Frame = 0


Query: 39  AIMSLKSQAGELLKYLVLSDPVVPYISIPAGVLASKLVYDLTDMISSVYFKSYSNLSRIQ 98
           A+ S +  A  LLK  +L+DP++PY SI  G+ A K+VYDLT + S+VYFKSYSNL+ +Q
Sbjct: 2   AMKSYQINAELLLKEYLLADPLIPYTSITGGIFACKMVYDLTSLFSAVYFKSYSNLTNLQ 61

Query: 99  RVEWNNRAMSTVHAIFITAAALYMVFLSDLYSDQ-YFGPITFRNSTISTFGLGVSVGYFI 158
           R+EWNNRA+ST HA+FIT  +LY VF SDL+SDQ + G +TFR+S +STF LGVS GYFI
Sbjct: 62  RIEWNNRAISTFHAVFITTMSLYFVFCSDLFSDQPHAGLVTFRSSALSTFALGVSAGYFI 121

Query: 159 TDLVMILWFYPAIGGMEYVIHHLLSLLAVAYAMLTG 194
            DL MI+WFYP++GGMEYVIHH LSL+AVAY+MLTG
Sbjct: 122 ADLGMIIWFYPSLGGMEYVIHHFLSLIAVAYSMLTG 157

The following BLAST results are available for this feature:

BLAST of CsGy4G020220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653984.1	2.2e-76	100.00	PREDICTED: transmembrane protein 56-like isoform X1 [Cucumis sativus]	[more]
KGN54944.1	2.2e-76	100.00	hypothetical protein Csa_4G614180 [Cucumis sativus]	[more]
XP_008466799.1	3.0e-73	96.08	PREDICTED: transmembrane protein 56-like [Cucumis melo] >XP_008466800.1 PREDICTE...	[more]
XP_022141361.1	5.5e-67	87.82	transmembrane protein 56-like [Momordica charantia] >XP_022141369.1 transmembran...	[more]
XP_022940088.1	8.0e-66	85.81	transmembrane protein 56-like [Cucurbita moschata] >XP_022940089.1 transmembrane...	[more]

BLAST of CsGy4G020220 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G19645.1	1.8e-43	51.15	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT1G31300.1	2.2e-41	47.70	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT4G10360.1	1.5e-26	39.72	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]

BLAST of CsGy4G020220 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8CGF5\|TMM56_MOUSE	7.2e-10	28.66	Transmembrane protein 56 OS=Mus musculus OX=10090 GN=Tmem56 PE=2 SV=1	[more]
sp\|Q6PGS5\|TM56B_XENLA	5.2e-08	26.67	Transmembrane protein 56-B OS=Xenopus laevis OX=8355 GN=tmem56-b PE=2 SV=1	[more]
sp\|Q96MV1\|TMM56_HUMAN	3.7e-06	25.68	Transmembrane protein 56 OS=Homo sapiens OX=9606 GN=TMEM56 PE=1 SV=1	[more]
sp\|Q5XIY2\|TM56B_DANRE	8.2e-06	25.22	Transmembrane protein 56-B OS=Danio rerio OX=7955 GN=tmem56b PE=2 SV=1	[more]
sp\|Q6GLX2\|TM56A_XENLA	2.7e-04	22.86	Transmembrane protein 56-A OS=Xenopus laevis OX=8355 GN=tmem56-a PE=2 SV=1	[more]

BLAST of CsGy4G020220 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L1M1\|A0A0A0L1M1_CUCSA	1.5e-76	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G614180 PE=4 SV=1	[more]
tr\|A0A1S3CS93\|A0A1S3CS93_CUCME	2.0e-73	96.08	transmembrane protein 56-like OS=Cucumis melo OX=3656 GN=LOC103504121 PE=4 SV=1	[more]
tr\|A0A2P5BTG4\|A0A2P5BTG4_PARAD	1.6e-51	47.81	TRAM/LAG1/CLN8 domain containing protein OS=Parasponia andersonii OX=3476 GN=Pan...	[more]
tr\|A0A2P4JJZ4\|A0A2P4JJZ4_QUESU	2.0e-49	67.53	Transmembrane protein 56 OS=Quercus suber OX=58331 GN=CFP56_61663 PE=4 SV=1	[more]
tr\|A0A1I9W0B4\|A0A1I9W0B4_POPTO	1.0e-48	64.10	TRAM, LAG1 and CLN8 lipid-sensing domain-containing protein OS=Populus tomentosa...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR006634	TLC-dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G020220.1	CsGy4G020220.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006634	TRAM/LAG1/CLN8 homology domain	PFAM	PF03798	TRAM_LAG1_CLN8	coord: 101..196 e-value: 8.7E-11 score: 41.8
IPR006634	TRAM/LAG1/CLN8 homology domain	PROSITE	PS50922	TLC	coord: 97..240 score: 14.66
None	No IPR available	PANTHER	PTHR13439:SF18	SUBFAMILY NOT NAMED	coord: 31..201
None	No IPR available	PANTHER	PTHR13439	CT120 PROTEIN	coord: 31..201

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy4G020220	Cla023241	Watermelon (97103) v1	cgybwmB326
CsGy4G020220	Csa4G614180	Cucumber (Chinese Long) v2	cgybcuB166
CsGy4G020220	MELO3C022964	Melon (DHL92) v3.5.1	cgybmeB262
CsGy4G020220	ClCG11G016570	Watermelon (Charleston Gray)	cgybwcgB259
CsGy4G020220	CSPI04G21700	Wild cucumber (PI 183967)	cgybcpiB169
CsGy4G020220	CmaCh09G007270	Cucurbita maxima (Rimu)	cgybcmaB470
CsGy4G020220	CmaCh01G013220	Cucurbita maxima (Rimu)	cgybcmaB505
CsGy4G020220	CmoCh01G013760	Cucurbita moschata (Rifu)	cgybcmoB477
CsGy4G020220	CmoCh09G007210	Cucurbita moschata (Rifu)	cgybcmoB437
CsGy4G020220	Lsi04G018920	Bottle gourd (USVL1VR-Ls)	cgyblsiB263
CsGy4G020220	Cp4.1LG06g05650	Cucurbita pepo (Zucchini)	cgybcpeB566
CsGy4G020220	Cp4.1LG02g02680	Cucurbita pepo (Zucchini)	cgybcpeB547
CsGy4G020220	MELO3C022964.2	Melon (DHL92) v3.6.1	cgybmedB259
CsGy4G020220	CsaV3_4G032030	Cucumber (Chinese Long) v3	cgybcucB171
CsGy4G020220	Cla97C11G222500	Watermelon (97103) v2	cgybwmbB265
CsGy4G020220	Bhi09G002995	Wax gourd	cgybwgoB398
CsGy4G020220	Carg20045	Silver-seed gourd	carcgybB1029

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy4G020220	Melon (DHL92) v3.6.1	cgybmedB275
CsGy4G020220	Silver-seed gourd	carcgybB0636