CsGy4G015400 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G015400
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	plectin-like protein
Location	Chr4 : 20115377 .. 20118535 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATACGATGCGCCTGGTTTTTTTCAACACATTGGTGACCAATGAGATTAATGAACTTGAATGCCGAAGGGTTTCTGTTCAAGAAAGGAAGCAAGCGATGAAGAAACTTGAGCAACAAGAACTTTGGGCTCAGTGAGTATACATTTTCTGTTTTGAAGTTGCTTTGTCATCTGTAATTGTTAAATGTTAATTCGGTAGCAATTATCTAAATCCTGTGAATTTTGAATCTATTTCAAAATTTTGTTGTTTTTAGTATTATCTGATAAACACAGTCTTTTATGTATTGTTAGTTAGAACTTGGAAGTACAAAAGCTGTAATGTATATAAGTTATAGGTTATTGGCACCTTTGTTTCTCCTATCGATTGCTTATGGTTAGAAAGGTTAACTAGGTAGACATTCCTCTGAAGATGGCTGCTTAGTTTTTGAACTAATGAACGTTTTGTAGGCTAATAGTTGATCCATGATATAGATAATGGCAACCTCTTTGAATGGAGTCTCTGTCCTATGTTGAAAATAGGAATCTTTTTTAAGGTATTTGAAGTTTGTAAAAGATGAGAGCGAGAAGAAACAAAGGTAACGATGATTAGTAAGCAACACTACCAAGTACAAAAAGTTGTCAAATTCATTATTTACTAAAGAGGTGAACTAGAATTACATCGAGCGTTAGGAATACAAACAAAGTCTCACATTGACTAGAAAAGAGAGAAATCTACAGTTCCATTGATATGAGGTTTTTTTTTTGGATAAAACCAAAAGCAAAGCTGCAAAGGCTTATGCCAAAGGTAGACGATAATACACTATTGCTGAGAGATGCGGCAGATCCATTGCCCTTCATGTCTGGAACTGTAGTACATTCCAGAACTGAATTTATGGTAGTTGAAACTATCGTATTTGTTTTAACTGTGAACTTATGAACTGGGTGGCTGTCAAAGATCCACTCAAGTTTCAGTAATATTGGTAGGCATTAATTTGACATTTCTTATCCTCTAAATTGATGTATATTTTCTATTTTTCTTGCAGGAGGAAGCTTTCAATGTATGCTTCAGTTACTGATATTATACCAAACATGGAAGATCAGTCTAAAATTTCTGGCCGTATCCTTCGTTTGAGTTTATATTCTTTTCTGTTATATTTTTCTTTTTCCTTTTGCACTTAGCCAATTACTTTACCTTAACATGAATTGACTACAGATATTGTGGACAGAAATAAACGAGTTGTCCAAAAGTTTGAATTCGACCCAGCTAAGATATCTTCTTTTGACACATGCAATGGCCTTTGGAATATGATTAATTCCCCATAGTACAGATATCTATTACATTGTGATTTGTGAATTAGAAGCTTATTATTGCTTGGTCCTTTTAGTCACTTCATGGTATTACAATAGAACGCTTATTTTGTTGTGTATGTATGTTTGAAGGACTACTTTATAAGGTCCTCTTGTATGTGATAACTTGTTGTGAATCAAATCTCCTTGGTCCTTAATGATTATTGAAGAAAAGAATGTCCGTCTATGTTAAGGCCCCAAGCCATGAAAATGGTGAATGATGTTACTCATTTTCATGGATATTTGATGCTTGGAAGCAACTAACTTTGTATATATTCCACTGATCTCATGGAAGTTTAAATTCTACGATCTTTTGTAATTTGATTATATTAGTCGTTGAAAATGATTTTTTTACTTCCTTTATAGTTGAGGTTGAGGCTAATGTTTTAGCTCATGTGTTAGTTTGTTACTTTTCTGTTATTAACTTTAATCTTTCTCATTGTATATCTATACTTCCTTGGAGATGAGTTAAGTTTTGGTATTATTTCCTCCACTTTACATCTGTTAATAGCTATGGATCGTACAATGAAAATATTATGAACATGGGATGTTTATGTCAATTCTGATGTAATTCAGAGACAATATTCTATGATAATATTACTTATGTTAGAACACGCAGCAAATAGTTACAAGCCACCCGAAAGCAAGAAGGACAAGAGCTAGCCACCATCTTTCACAGATGATATTGGATTCAAGCACCATAAGCTTCATAAAATAGAGTTCATAATATCAGGTTTTACTCTTCCCCTCAATCTTTTTTTGGTTGACGGAGAGATATTGACAATTGTAGAATTATCTACTGTCTGAGCAAAGGACAATCAGCACATGAACTTAAATAGTTATCATAATTCTGAAACTGAAATAGTTATATTCTATAATTATCTTCTAGTATTGTTATTTCAAATGACAAACTTCTCCATTGACTGCAGTATCTAATTTTCTGGCTGGTTTGATCTTGAGATCTCTCCCTGTGTTTATAATGTTGAGTTTCTCGTTGTAGTTGCATAACAGACTTGACTTCCTCCGCTGGCATTATCCAGGTATTGGCGGTTTTTGAGGTTTATAGACTTGCAAGCTTCTGGTACAGCACTGCCTTTATACGCTTTGCAAATGTAGGCCATGAAGTTTTGGTAGTCCTGATTCAGACAAAAGAAAACAGATTGATTTCAAAGAATTACAAAGCAAAGAACAAGGAAAAAACTAGCTTGAATCGAAGCTGACCAACCTCCTGGAGAGGGTGATTATCGACAATGACCCATGGAACAAATCGGTGAGGCGGATTGAGGCGAGTAGTTTCAGAAGCATAGTATTGTTCAAGCTGCATTTCATTGACTTACTCAGGATTCAATCAAGAAAGAAACAGAAATAGAAGCTGTTAAGTAAGCAATGCTACCATTTTTCCATGCCCATTTCTGTAGCAATCTATTGGTATGGCACTCAACTGTGCAATATCAAAACACTTTGTCCATTCATTGTGTCTGTTTTGCACTGTCAATCCCTCAACACAATGGATGAATCTGAAATGTTCTTCCTTCACATGCCAAAACGCATAAGTTTAGTAGATTTAACATTTATATCGTGCCCATTTCTATAGCAATTTATACAATGAGTGACCAGTGCAGTTTACCTGTCTATGTCTAGATAAATTTCAATTTCAAACTCTACTGCATTTCAGTGTTAAGAAAACTCTTATAATATTTTATTATTGGTTGGTGATTACCATGGATTAGACACATTTCCGCCCATCCTATTATTTATTGGTAATTAACTATATTTGTAATTGAAGTGATAATAGTAAAAGAGTTAGTACTGTATCAGGGTAAACTGAAATG

mRNA sequence

ATGTATACGATGCGCCTGGTTTTTTTCAACACATTGGTGACCAATGAGATTAATGAACTTGAATGCCGAAGGGTTTCTGTTCAAGAAAGGAAGCAAGCGATGAAGAAACTTGAGCAACAAGAACTTTGGGCTCAGAGGAAGCTTTCAATGTATGCTTCAGTTACTGATATTATACCAAACATGGAAGATCAGTCTAAAATTTCTGGCCATATTGTGGACAGAAATAAACGAGTTGTCCAAAAGTTTGAATTCGACCCAGCTAAGATATCTTCTTTTGACACATGCAATGGCCTTTGGAATATGATTAATTCCCCATAGTACAGATATCTATTACATTGTGATTTGTGAATTAGAAGCTTATTATTGCTTGGTCCTTTTAGTCACTTCATGGTATTACAATAGAACGCTTATTTTGTTGTGTATGTATGTTTGAAGGACTACTTTATAAGGTCCTCTTGTATGTGATAACTTGTTGTGAATCAAATCTCCTTGGTCCTTAATGATTATTGAAGAAAAGAATGTCCGTCTATGTTAAGGCCCCAAGCCATGAAAATGGTGAATGATGTTACTCATTTTCATGGATATTTGATGCTTGGAAGCAACTAACTTTGTATATATTCCACTGATCTCATGGAAGTTTAAATTCTACGATCTTTTGTAATTTGATTATATTAGTCGTTGAAAATGATTTTTTTACTTCCTTTATAGTTGAGGTTGAGGCTAATGTTTTAGCTCATGTGTTAGTTTGTTACTTTTCTGTTATTAACTTTAATCTTTCTCATTGTATATCTATACTTCCTTGGAGATGAGTTAAGTTTTGGTATTATTTCCTCCACTTTACATCTGTTAATAGCTATGGATCGTACAATGAAAATATTATGAACATGGGATGTTTATGTCAATTCTGATGTAATTCAGAGACAATATTCTATGATAATATTACTTATGTTAGAACACGCAGCAAATAGTTACAAGCCACCCGAAAGCAAGAAGGACAAGAGCTAGCCACCATCTTTCACAGATGATATTGGATTCAAGCACCATAAGCTTCATAAAATAGAGTTCATAATATCAGGTTTTACTCTTCCCCTCAATCTTTTTTTGGTTGACGGAGAGATATTGACAATTGTAGAATTATCTACTGTCTGAGCAAAGGACAATCAGCACATGAACTTAAATAGTTATCATAATTCTGAAACTGAAATAGTTATATTCTATAATTATCTTCTAGTATTGTTATTTCAAATGACAAACTTCTCCATTGACTGCAGTATCTAATTTTCTGGCTGGTTTGATCTTGAGATCTCTCCCTGTGTTTATAATGTTGAGTTTCTCGTTGTAGTTGCATAACAGACTTGACTTCCTCCGCTGGCATTATCCAGGTATTGGCGGTTTTTGAGGTTTATAGACTTGCAAGCTTCTGGTACAGCACTGCCTTTATACGCTTTGCAAATGTAGGCCATGAAGTTTTGGTAGTCCTGATTCAGACAAAAGAAAACAGATTGATTTCAAAGAATTACAAAGCAAAGAACAAGGAAAAAACTAGCTTGAATCGAAGCTGACCAACCTCCTGGAGAGGGTGATTATCGACAATGACCCATGGAACAAATCGGTGAGGCGGATTGAGGCGAGTAGTTTCAGAAGCATAGTATTGTTCAAGCTGCATTTCATTGACTTACTCAGGATTCAATCAAGAAAGAAACAGAAATAGAAGCTGTTAAGTAAGCAATGCTACCATTTTTCCATGCCCATTTCTGTAGCAATCTATTGGTATGGCACTCAACTGTGCAATATCAAAACACTTTGTCCATTCATTGTGTCTGTTTTGCACTGTCAATCCCTCAACACAATGGATGAATCTGAAATGTTCTTCCTTCACATGCCAAAACGCATAAGTTTAGTAGATTTAACATTTATATCGTGCCCATTTCTATAGCAATTTATACAATGAGTGACCAGTGCAGTTTACCTGTCTATGTCTAGATAAATTTCAATTTCAAACTCTACTGCATTTCAGTGTTAAGAAAACTCTTATAATATTTTATTATTGGTTGGTGATTACCATGGATTAGACACATTTCCGCCCATCCTATTATTTATTGGTAATTAACTATATTTGTAATTGAAGTGATAATAGTAAAAGAGTTAGTACTGTATCAGGGTAAACTGAAATG

Coding sequence (CDS)

ATGTATACGATGCGCCTGGTTTTTTTCAACACATTGGTGACCAATGAGATTAATGAACTTGAATGCCGAAGGGTTTCTGTTCAAGAAAGGAAGCAAGCGATGAAGAAACTTGAGCAACAAGAACTTTGGGCTCAGAGGAAGCTTTCAATGTATGCTTCAGTTACTGATATTATACCAAACATGGAAGATCAGTCTAAAATTTCTGGCCATATTGTGGACAGAAATAAACGAGTTGTCCAAAAGTTTGAATTCGACCCAGCTAAGATATCTTCTTTTGACACATGCAATGGCCTTTGGAATATGATTAATTCCCCATAG

Protein sequence

MYTMRLVFFNTLVTNEINELECRRVSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMEDQSKISGHIVDRNKRVVQKFEFDPAKISSFDTCNGLWNMINSP

Homology

[Close]

BLAST of CsGy4G015400 vs. NCBI nr
Match: KGN54400.1 (hypothetical protein Csa_4G312820 [Cucumis sativus])

HSP 1 Score: 204.5 bits (519), Expect = 1.7e-49
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 4   MRLVFFNTLVTNEINELECRRVSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMED 63
           MRLVFFNTLVTNEINELECRRVSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMED
Sbjct: 1   MRLVFFNTLVTNEINELECRRVSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMED 60

Query: 64  QSKISGHIVDRNKRVVQKFEFDPAKISSFDTCNGLWNMINSP 106
           QSKISGHIVDRNKRVVQKFEFDPAKISSFDTCNGLWNMINSP
Sbjct: 61  QSKISGHIVDRNKRVVQKFEFDPAKISSFDTCNGLWNMINSP 102

[Close]

BLAST of CsGy4G015400 vs. NCBI nr
Match: XP_004148609.1 (PREDICTED: uncharacterized protein LOC101211451 [Cucumis sativus])

HSP 1 Score: 189.5 bits (480), Expect = 5.8e-45
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 12  LVTNEINELECRRVSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMEDQSKISGHI 71
           LVTNEINELECRRVSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMEDQSKISGHI
Sbjct: 108 LVTNEINELECRRVSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMEDQSKISGHI 167

Query: 72  VDRNKRVVQKFEFDPAKISSFDTCNGLWNMINSP 106
           VDRNKRVVQKFEFDPAKISSFDTCNGLWNMINSP
Sbjct: 168 VDRNKRVVQKFEFDPAKISSFDTCNGLWNMINSP 201

[Close]

BLAST of CsGy4G015400 vs. NCBI nr
Match: XP_008464222.1 (PREDICTED: uncharacterized protein LOC103502153 [Cucumis melo])

HSP 1 Score: 180.6 bits (457), Expect = 2.7e-42
Identity = 90/94 (95.74%), Postives = 92/94 (97.87%), Query Frame = 0


Query: 12  LVTNEINELECRRVSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMEDQSKISGHI 71
           LVTNEINELE +RVSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNM+DQSKISGHI
Sbjct: 108 LVTNEINELERQRVSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMDDQSKISGHI 167

Query: 72  VDRNKRVVQKFEFDPAKISSFDTCNGLWNMINSP 106
           VDRNKRVVQKFEFDP KISSFDTCNGLWNMINSP
Sbjct: 168 VDRNKRVVQKFEFDPTKISSFDTCNGLWNMINSP 201

[Close]

BLAST of CsGy4G015400 vs. NCBI nr
Match: XP_022144075.1 (uncharacterized protein LOC111013852 isoform X2 [Momordica charantia])

HSP 1 Score: 163.7 bits (413), Expect = 3.4e-37
Identity = 80/94 (85.11%), Postives = 88/94 (93.62%), Query Frame = 0


Query: 12  LVTNEINELECRRVSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMEDQSKISGHI 71
           LVT+EINEL+C+R+SVQERKQAMKKLEQQEL AQRKLSMYASVTDIIPNM+DQSKISGHI
Sbjct: 104 LVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHI 163

Query: 72  VDRNKRVVQKFEFDPAKISSFDTCNGLWNMINSP 106
           VDRNKRVVQKFE DP K S+FD CN +W+MINSP
Sbjct: 164 VDRNKRVVQKFELDPTKTSAFDICNSIWDMINSP 197

[Close]

BLAST of CsGy4G015400 vs. NCBI nr
Match: XP_022144074.1 (uncharacterized protein LOC111013852 isoform X1 [Momordica charantia])

HSP 1 Score: 163.7 bits (413), Expect = 3.4e-37
Identity = 80/94 (85.11%), Postives = 88/94 (93.62%), Query Frame = 0


Query: 12  LVTNEINELECRRVSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMEDQSKISGHI 71
           LVT+EINEL+C+R+SVQERKQAMKKLEQQEL AQRKLSMYASVTDIIPNM+DQSKISGHI
Sbjct: 108 LVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHI 167

Query: 72  VDRNKRVVQKFEFDPAKISSFDTCNGLWNMINSP 106
           VDRNKRVVQKFE DP K S+FD CN +W+MINSP
Sbjct: 168 VDRNKRVVQKFELDPTKTSAFDICNSIWDMINSP 201

[Close]

BLAST of CsGy4G015400 vs. TAIR10
Match: AT3G08880.1 (unknown protein)

HSP 1 Score: 100.5 bits (249), Expect = 6.4e-22
Identity = 43/92 (46.74%), Postives = 74/92 (80.43%), Query Frame = 0


Query: 12  LVTNEINELECRRVSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMEDQSKISGHI 71
           LV +E+ +L  +  S+ E KQ+ K+  + +L A++KLSMYASVT++IP+++D SKISG++
Sbjct: 108 LVADELKDLNAQLSSIDEHKQSTKRKVRDDLRAEKKLSMYASVTNVIPDIDDPSKISGYM 167

Query: 72  VDRNKRVVQKFEFDPAKISSFDTCNGLWNMIN 104
           VDR KR+++KF+F+  K+++++TCN +W++IN
Sbjct: 168 VDREKRLIEKFQFETNKMTAYETCNSIWSIIN 199

[Close]

BLAST of CsGy4G015400 vs. TAIR10
Match: AT5G01570.1 (unknown protein)

HSP 1 Score: 67.0 bits (162), Expect = 7.8e-12
Identity = 33/70 (47.14%), Postives = 52/70 (74.29%), Query Frame = 0


Query: 28  QERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMEDQSKISGHIVDRNKRVVQKFEFDPA 87
           +E + A+K+ ++ +L  + KL MYASVT +IPN++D  K SG++V R+KR++ KFEFD  
Sbjct: 111 EEHRLAIKRNKRDQLRTETKLPMYASVTRVIPNIDDSLKTSGYMVGRDKRLMDKFEFDSN 170

Query: 88  KISS-FDTCN 97
           K +S ++TCN
Sbjct: 171 KSTSVYETCN 180

[Close]

BLAST of CsGy4G015400 vs. Swiss-Prot
Match: sp|Q67XT3|SPC24_ARATH (Kinetochore protein SPC24 homolog OS=Arabidopsis thaliana OX=3702 GN=SPC24 PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.2e-20
Identity = 43/92 (46.74%), Postives = 74/92 (80.43%), Query Frame = 0


Query: 12  LVTNEINELECRRVSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMEDQSKISGHI 71
           LV +E+ +L  +  S+ E KQ+ K+  + +L A++KLSMYASVT++IP+++D SKISG++
Sbjct: 108 LVADELKDLNAQLSSIDEHKQSTKRKVRDDLRAEKKLSMYASVTNVIPDIDDPSKISGYM 167

Query: 72  VDRNKRVVQKFEFDPAKISSFDTCNGLWNMIN 104
           VDR KR+++KF+F+  K+++++TCN +W++IN
Sbjct: 168 VDREKRLIEKFQFETNKMTAYETCNSIWSIIN 199

[Close]

BLAST of CsGy4G015400 vs. TrEMBL
Match: tr|A0A0A0KXM7|A0A0A0KXM7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G312820 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.1e-49
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 4   MRLVFFNTLVTNEINELECRRVSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMED 63
           MRLVFFNTLVTNEINELECRRVSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMED
Sbjct: 1   MRLVFFNTLVTNEINELECRRVSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMED 60

Query: 64  QSKISGHIVDRNKRVVQKFEFDPAKISSFDTCNGLWNMINSP 106
           QSKISGHIVDRNKRVVQKFEFDPAKISSFDTCNGLWNMINSP
Sbjct: 61  QSKISGHIVDRNKRVVQKFEFDPAKISSFDTCNGLWNMINSP 102

[Close]

BLAST of CsGy4G015400 vs. TrEMBL
Match: tr|A0A1S3CKZ4|A0A1S3CKZ4_CUCME (uncharacterized protein LOC103502153 OS=Cucumis melo OX=3656 GN=LOC103502153 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.8e-42
Identity = 90/94 (95.74%), Postives = 92/94 (97.87%), Query Frame = 0


Query: 12  LVTNEINELECRRVSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMEDQSKISGHI 71
           LVTNEINELE +RVSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNM+DQSKISGHI
Sbjct: 108 LVTNEINELERQRVSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMDDQSKISGHI 167

Query: 72  VDRNKRVVQKFEFDPAKISSFDTCNGLWNMINSP 106
           VDRNKRVVQKFEFDP KISSFDTCNGLWNMINSP
Sbjct: 168 VDRNKRVVQKFEFDPTKISSFDTCNGLWNMINSP 201

[Close]

BLAST of CsGy4G015400 vs. TrEMBL
Match: tr|A0A2C9V9R6|A0A2C9V9R6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G110100 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.2e-28
Identity = 59/92 (64.13%), Postives = 82/92 (89.13%), Query Frame = 0


Query: 12  LVTNEINELECRRVSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMEDQSKISGHI 71
           ++ NEI++LEC+R+S +++K+A+KKLEQ+EL AQRKLSMYASVT+IIP+++D SKISGHI
Sbjct: 4   VINNEISDLECQRISREDQKKALKKLEQEELRAQRKLSMYASVTNIIPDLDDHSKISGHI 63

Query: 72  VDRNKRVVQKFEFDPAKISSFDTCNGLWNMIN 104
           VDR  ++V+KFEFDPA +++FDTC  +W MIN
Sbjct: 64  VDRENKMVEKFEFDPANVAAFDTCQSIWKMIN 95

[Close]

BLAST of CsGy4G015400 vs. TrEMBL
Match: tr|A0A1R3JS85|A0A1R3JS85_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_14480 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 5.5e-28
Identity = 60/92 (65.22%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 13  VTNEINELECRRVSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMEDQSKISGHIV 72
           ++NEINELE +R S++ERKQ ++KL+Q +L  QRKLSMYAS+T+IIP++EDQSKISGH+V
Sbjct: 101 ISNEINELERQRASIEERKQILRKLDQDKLKEQRKLSMYASITNIIPDLEDQSKISGHMV 160

Query: 73  DRNKRVVQKFEFDPAKISSFDTCNGLWNMINS 105
           DR+K+VV+KFEFDPAK+++F+ C+ LW MIN+
Sbjct: 161 DRDKKVVEKFEFDPAKMTAFEACDNLWKMINN 192

[Close]

BLAST of CsGy4G015400 vs. TrEMBL
Match: tr|A0A2I4F2G6|A0A2I4F2G6_9ROSI (uncharacterized protein LOC108994891 OS=Juglans regia OX=51240 GN=LOC108994891 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.6e-27
Identity = 61/93 (65.59%), Postives = 79/93 (84.95%), Query Frame = 0


Query: 12  LVTNEINELECRRVSVQERKQAMKKLEQQELWAQRKLSMYASVTDIIPNMEDQSKISGHI 71
           ++TNEIN+LE +RVSVQER+Q +KKLEQ EL AQR LS+YASVT+IIPN++D+S+ SGHI
Sbjct: 108 IITNEINDLELQRVSVQERRQIVKKLEQDELRAQRMLSLYASVTNIIPNLDDESRFSGHI 167

Query: 72  VDRNKRVVQKFEFDPAKISSFDTCNGLWNMINS 105
           VDR+K+VV++FEFD  KI   D CN +W MI+S
Sbjct: 168 VDRDKKVVERFEFDLTKIDCLDACNAIWKMISS 200

The following BLAST results are available for this feature:

BLAST of CsGy4G015400 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN54400.1	1.7e-49	100.00	hypothetical protein Csa_4G312820 [Cucumis sativus]	[more]
XP_004148609.1	5.8e-45	100.00	PREDICTED: uncharacterized protein LOC101211451 [Cucumis sativus]	[more]
XP_008464222.1	2.7e-42	95.74	PREDICTED: uncharacterized protein LOC103502153 [Cucumis melo]	[more]
XP_022144075.1	3.4e-37	85.11	uncharacterized protein LOC111013852 isoform X2 [Momordica charantia]	[more]
XP_022144074.1	3.4e-37	85.11	uncharacterized protein LOC111013852 isoform X1 [Momordica charantia]	[more]

BLAST of CsGy4G015400 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G08880.1	6.4e-22	46.74	unknown protein	[more]
AT5G01570.1	7.8e-12	47.14	unknown protein	[more]

BLAST of CsGy4G015400 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q67XT3\|SPC24_ARATH	1.2e-20	46.74	Kinetochore protein SPC24 homolog OS=Arabidopsis thaliana OX=3702 GN=SPC24 PE=1 ...	[more]

BLAST of CsGy4G015400 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KXM7\|A0A0A0KXM7_CUCSA	1.1e-49	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G312820 PE=4 SV=1	[more]
tr\|A0A1S3CKZ4\|A0A1S3CKZ4_CUCME	1.8e-42	95.74	uncharacterized protein LOC103502153 OS=Cucumis melo OX=3656 GN=LOC103502153 PE=...	[more]
tr\|A0A2C9V9R6\|A0A2C9V9R6_MANES	4.2e-28	64.13	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G110100 PE=4 SV=...	[more]
tr\|A0A1R3JS85\|A0A1R3JS85_9ROSI	5.5e-28	65.22	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_14480 PE=4 SV=1	[more]
tr\|A0A2I4F2G6\|A0A2I4F2G6_9ROSI	3.6e-27	65.59	uncharacterized protein LOC108994891 OS=Juglans regia OX=51240 GN=LOC108994891 P...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G015400.1	CsGy4G015400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 17..37
None	No IPR available	PANTHER	PTHR35730	FAMILY NOT NAMED	coord: 16..103

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy4G015400	Csa4G312820	Cucumber (Chinese Long) v2	cgybcuB167
CsGy4G015400	CSPI04G16100	Wild cucumber (PI 183967)	cgybcpiB170
CsGy4G015400	CmoCh03G003460	Cucurbita moschata (Rifu)	cgybcmoB507
CsGy4G015400	Lsi01G015700	Bottle gourd (USVL1VR-Ls)	cgyblsiB236
CsGy4G015400	Cp4.1LG19g02590	Cucurbita pepo (Zucchini)	cgybcpeB526
CsGy4G015400	Cla97C04G073410	Watermelon (97103) v2	cgybwmbB282
CsGy4G015400	Bhi03G001714	Wax gourd	cgybwgoB374

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy4G015400	Cucumber (Gy14) v2	cgybcgybB083
CsGy4G015400	Cucumber (Gy14) v2	cgybcgybB130
CsGy4G015400	Cucurbita maxima (Rimu)	cgybcmaB488
CsGy4G015400	Cucurbita maxima (Rimu)	cgybcmaB490
CsGy4G015400	Cucurbita maxima (Rimu)	cgybcmaB509
CsGy4G015400	Cucurbita maxima (Rimu)	cgybcmaB533
CsGy4G015400	Cucurbita maxima (Rimu)	cgybcmaB550
CsGy4G015400	Cucurbita maxima (Rimu)	cgybcmaB561
CsGy4G015400	Cucurbita maxima (Rimu)	cgybcmaB562
CsGy4G015400	Cucurbita maxima (Rimu)	cgybcmaB573
CsGy4G015400	Cucurbita moschata (Rifu)	cgybcmoB458
CsGy4G015400	Cucurbita moschata (Rifu)	cgybcmoB461
CsGy4G015400	Cucurbita moschata (Rifu)	cgybcmoB480
CsGy4G015400	Cucurbita moschata (Rifu)	cgybcmoB525
CsGy4G015400	Cucurbita moschata (Rifu)	cgybcmoB536
CsGy4G015400	Cucurbita moschata (Rifu)	cgybcmoB537
CsGy4G015400	Cucurbita moschata (Rifu)	cgybcmoB545
CsGy4G015400	Cucurbita pepo (Zucchini)	cgybcpeB463
CsGy4G015400	Cucurbita pepo (Zucchini)	cgybcpeB483
CsGy4G015400	Cucurbita pepo (Zucchini)	cgybcpeB514
CsGy4G015400	Cucurbita pepo (Zucchini)	cgybcpeB555
CsGy4G015400	Cucurbita pepo (Zucchini)	cgybcpeB576
CsGy4G015400	Cucumber (Chinese Long) v2	cgybcuB162
CsGy4G015400	Cucumber (Chinese Long) v2	cgybcuB184
CsGy4G015400	Bottle gourd (USVL1VR-Ls)	cgyblsiB258
CsGy4G015400	Bottle gourd (USVL1VR-Ls)	cgyblsiB262
CsGy4G015400	Melon (DHL92) v3.5.1	cgybmeB244
CsGy4G015400	Melon (DHL92) v3.5.1	cgybmeB248
CsGy4G015400	Melon (DHL92) v3.5.1	cgybmeB284
CsGy4G015400	Melon (DHL92) v3.6.1	cgybmedB244
CsGy4G015400	Melon (DHL92) v3.6.1	cgybmedB246
CsGy4G015400	Melon (DHL92) v3.6.1	cgybmedB284
CsGy4G015400	Watermelon (Charleston Gray)	cgybwcgB252
CsGy4G015400	Watermelon (Charleston Gray)	cgybwcgB262
CsGy4G015400	Watermelon (Charleston Gray)	cgybwcgB282
CsGy4G015400	Watermelon (97103) v1	cgybwmB314
CsGy4G015400	Watermelon (97103) v1	cgybwmB270
CsGy4G015400	Watermelon (97103) v1	cgybwmB328
CsGy4G015400	Wild cucumber (PI 183967)	cgybcpiB165
CsGy4G015400	Wild cucumber (PI 183967)	cgybcpiB187
CsGy4G015400	Silver-seed gourd	carcgybB0172
CsGy4G015400	Silver-seed gourd	carcgybB0277
CsGy4G015400	Silver-seed gourd	carcgybB0561
CsGy4G015400	Silver-seed gourd	carcgybB0581
CsGy4G015400	Silver-seed gourd	carcgybB0585
CsGy4G015400	Silver-seed gourd	carcgybB0985
CsGy4G015400	Cucumber (Chinese Long) v3	cgybcucB169
CsGy4G015400	Cucumber (Chinese Long) v3	cgybcucB171
CsGy4G015400	Cucumber (Chinese Long) v3	cgybcucB189
CsGy4G015400	Watermelon (97103) v2	cgybwmbB260
CsGy4G015400	Watermelon (97103) v2	cgybwmbB271
CsGy4G015400	Wax gourd	cgybwgoB348
CsGy4G015400	Wax gourd	cgybwgoB370