CsGy4G009670 (gene) Cucumber (Gy14) v2

Overview
NameCsGy4G009670
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr4 : 8105660 .. 8106446 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGACCGCGGCAGCACCCTCCACCACCGCCATGACAATCCTCATTTTGACGCTAACCATAAGTAGTTATTGCAACGCCGCTTCTGTACTTCCTTCAAATTTCGCTAACGAGACGATCACGGCTATGACATCCACCATCTTTTGTAATGGACTCCTCCAACAGTGCTTCAATGTTGAAGAAAATGGCATCCATTATTATTCTACTCCAAGAACTGGAAGTCGAGCTTCAAGCGTATGTGGTCGGTTCTATAATGGAAGCTATATTAAATGTATAACAACCCAAGGATCCCCCAAACCGAAGGATTGTAGAAGTGCTTACGATCGCACCTGTTCTAGTTAAGAATACAGAAGTATATATAAGGTATATGTACGGTGTAGCTTGTTTTTTTTTTATTTATTTTAAATCACTATTAACCCTTCTTCTTTACTTGATCTTCATAATGCAATTTTATTATATTATACGTATTTTGGTACTTACTTAAATATCTGTTTTGTTTGTTTGGGTTAAAAATTGATAACCCATATACATTGGGGAGGAGGACCAATCAATTATATAAGCTTCTCTCCTTCTAATTTTTTTTTATTTATATCTTTTTTTTTTTGAAGTATAATGTGTTTTTACATAAATTGTGAAGTGGAGGATTTTGTTTATTTTTTGAATTGTATGTTTCAATTATTGAGGTTCATAAATAACTAAAAGGGATATATATATATATATATATAGGAGTGGGTACTTTCGTTTTTAACTATATCTCTCATAATTTATCTTTTAGGTTATTGGATAA

mRNA sequence

ATGGCGACCGCGGCAGCACCCTCCACCACCGCCATGACAATCCTCATTTTGACGCTAACCATAAGTAGTTATTGCAACGCCGCTTCTGTACTTCCTTCAAATTTCGCTAACGAGACGATCACGGCTATGACATCCACCATCTTTTGTAATGGACTCCTCCAACAGTGCTTCAATGTTGAAGAAAATGGCATCCATTATTATTCTACTCCAAGAACTGGAAGTCGAGCTTCAAGCGTTATTGGATAA

Coding sequence (CDS)

ATGGCGACCGCGGCAGCACCCTCCACCACCGCCATGACAATCCTCATTTTGACGCTAACCATAAGTAGTTATTGCAACGCCGCTTCTGTACTTCCTTCAAATTTCGCTAACGAGACGATCACGGCTATGACATCCACCATCTTTTGTAATGGACTCCTCCAACAGTGCTTCAATGTTGAAGAAAATGGCATCCATTATTATTCTACTCCAAGAACTGGAAGTCGAGCTTCAAGCGTTATTGGATAA

Protein sequence

MATAAAPSTTAMTILILTLTISSYCNAASVLPSNFANETITAMTSTIFCNGLLQQCFNVEENGIHYYSTPRTGSRASSVIG
Homology
[Close]
BLAST of CsGy4G009670 vs. NCBI nr
Match: KGN53789.1 (hypothetical protein Csa_4G129550 [Cucumis sativus])

HSP 1 Score: 153.7 bits (387), Expect = 2.7e-34
Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 0 

Query: 1  MATAAAPSTTAMTILILTLTISSYCNAASVLPSNFANETITAMTSTIFCNGLLQQCFNVE 60
          MATAAAPSTTAMTILILTLTISSYCNAASVLPSNFANETITAMTSTIFCNGLLQQCFNVE
Sbjct: 1  MATAAAPSTTAMTILILTLTISSYCNAASVLPSNFANETITAMTSTIFCNGLLQQCFNVE 60

Query: 61 ENGIHYYSTPRTGSRASSVIG 82
          ENGIHYYSTPRTGSRASSV G
Sbjct: 61 ENGIHYYSTPRTGSRASSVCG 81

[Close]
BLAST of CsGy4G009670 vs. TrEMBL
Match: tr|A0A0A0KY59|A0A0A0KY59_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G129550 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.8e-34
Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 0 

Query: 1  MATAAAPSTTAMTILILTLTISSYCNAASVLPSNFANETITAMTSTIFCNGLLQQCFNVE 60
          MATAAAPSTTAMTILILTLTISSYCNAASVLPSNFANETITAMTSTIFCNGLLQQCFNVE
Sbjct: 1  MATAAAPSTTAMTILILTLTISSYCNAASVLPSNFANETITAMTSTIFCNGLLQQCFNVE 60

Query: 61 ENGIHYYSTPRTGSRASSVIG 82
          ENGIHYYSTPRTGSRASSV G
Sbjct: 61 ENGIHYYSTPRTGSRASSVCG 81

The following BLAST results are available for this feature:
BLAST of CsGy4G009670 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53789.12.7e-3498.77hypothetical protein Csa_4G129550 [Cucumis sativus][more]
BLAST of CsGy4G009670 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy4G009670 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy4G009670 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KY59|A0A0A0KY59_CUCSA1.8e-3498.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G129550 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G009670.1CsGy4G009670.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy4G009670Csa4G129550Cucumber (Chinese Long) v2cgybcuB165
CsGy4G009670CSPI04G10030Wild cucumber (PI 183967)cgybcpiB168
CsGy4G009670CsaV3_4G010190Cucumber (Chinese Long) v3cgybcucB171
CsGy4G009670Bhi01G001736Wax gourdcgybwgoB356
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy4G009670Wax gourdcgybwgoB394
CsGy4G009670Wax gourdcgybwgoB405
CsGy4G009670Cucumber (Gy14) v2cgybcgybB024
CsGy4G009670Cucurbita maxima (Rimu)cgybcmaB483
CsGy4G009670Cucurbita maxima (Rimu)cgybcmaB487
CsGy4G009670Cucurbita maxima (Rimu)cgybcmaB517
CsGy4G009670Cucurbita moschata (Rifu)cgybcmoB443
CsGy4G009670Cucurbita moschata (Rifu)cgybcmoB453
CsGy4G009670Cucurbita moschata (Rifu)cgybcmoB457
CsGy4G009670Cucurbita moschata (Rifu)cgybcmoB488
CsGy4G009670Cucurbita pepo (Zucchini)cgybcpeB500
CsGy4G009670Cucurbita pepo (Zucchini)cgybcpeB538
CsGy4G009670Cucurbita pepo (Zucchini)cgybcpeB542
CsGy4G009670Cucurbita pepo (Zucchini)cgybcpeB554
CsGy4G009670Cucumber (Chinese Long) v2cgybcuB157
CsGy4G009670Bottle gourd (USVL1VR-Ls)cgyblsiB254
CsGy4G009670Bottle gourd (USVL1VR-Ls)cgyblsiB286
CsGy4G009670Melon (DHL92) v3.5.1cgybmeB234
CsGy4G009670Melon (DHL92) v3.5.1cgybmeB241
CsGy4G009670Melon (DHL92) v3.5.1cgybmeB272
CsGy4G009670Melon (DHL92) v3.6.1cgybmedB235
CsGy4G009670Melon (DHL92) v3.6.1cgybmedB240
CsGy4G009670Melon (DHL92) v3.6.1cgybmedB269
CsGy4G009670Watermelon (Charleston Gray)cgybwcgB277
CsGy4G009670Watermelon (Charleston Gray)cgybwcgB305
CsGy4G009670Watermelon (97103) v1cgybwmB284
CsGy4G009670Watermelon (97103) v1cgybwmB310
CsGy4G009670Watermelon (97103) v1cgybwmB334
CsGy4G009670Wild cucumber (PI 183967)cgybcpiB160
CsGy4G009670Cucumber (Chinese Long) v3cgybcucB164
CsGy4G009670Watermelon (97103) v2cgybwmbB279
CsGy4G009670Watermelon (97103) v2cgybwmbB296
CsGy4G009670Watermelon (97103) v2cgybwmbB307