CsGy4G009090 (gene) Cucumber (Gy14) v2

Overview
NameCsGy4G009090
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr4 : 7333123 .. 7333511 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAACCTACAAAGGAAGGTAAAAAAAACTTTGCTTCTTTTCTTTTCTTTTTTTCTTCTTCTTCCTTGATTTTTCTTCCCTCTTTTATTTTTAAAATTTTAACTTCTGCTTTTTCTTTTCTTTTTTTTTTTTTGCTTCCACACATTTTCAAAAGGTAAGATTTTTCCTCTGGTCTATTTTTGTGTTATGTATATTTTGAACTTTTGCAGGGGTGACCTCCTTTTAGCTTTGCCATCAGCGATCCCACTCTTACTACGAACAATTGGGCACCATTACTTTTCCATCAACAATTCCACCTCTACTAGGAACGATCAGGCACCTTACTCTGCAGTCAGTGATCTCACTTCTACTAGAAACAATTGGACATCTTTACTTTATCGTCAGTGA

mRNA sequence

ATGCAAACCTACAAAGGAAGGGGTGACCTCCTTTTAGCTTTGCCATCAGCGATCCCACTCTTACTACGAACAATTGGGCACCATTACTTTTCCATCAACAATTCCACCTCTACTAGGAACGATCAGGCACCTTACTCTGCAGTCAGTGATCTCACTTCTACTAGAAACAATTGGACATCTTTACTTTATCGTCAGTGA

Coding sequence (CDS)

ATGCAAACCTACAAAGGAAGGGGTGACCTCCTTTTAGCTTTGCCATCAGCGATCCCACTCTTACTACGAACAATTGGGCACCATTACTTTTCCATCAACAATTCCACCTCTACTAGGAACGATCAGGCACCTTACTCTGCAGTCAGTGATCTCACTTCTACTAGAAACAATTGGACATCTTTACTTTATCGTCAGTGA

Protein sequence

MQTYKGRGDLLLALPSAIPLLLRTIGHHYFSINNSTSTRNDQAPYSAVSDLTSTRNNWTSLLYRQ
Homology
[Close]
BLAST of CsGy4G009090 vs. NCBI nr
Match: KGN53717.1 (hypothetical protein Csa_4G110040 [Cucumis sativus])

HSP 1 Score: 100.1 bits (248), Expect = 2.9e-18
Identity = 48/49 (97.96%), Postives = 49/49 (100.00%), Query Frame = 0 

Query: 1  MQTYKGRGDLLLALPSAIPLLLRTIGHHYFSINNSTSTRNDQAPYSAVS 50
          MQTYKGRGDLLLALPSAIPLLLRTIGHHYFSINNSTSTRNDQAPYSAV+
Sbjct: 1  MQTYKGRGDLLLALPSAIPLLLRTIGHHYFSINNSTSTRNDQAPYSAVT 49

[Close]
BLAST of CsGy4G009090 vs. TrEMBL
Match: tr|A0A0A0KZB1|A0A0A0KZB1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G110040 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.9e-18
Identity = 48/49 (97.96%), Postives = 49/49 (100.00%), Query Frame = 0 

Query: 1  MQTYKGRGDLLLALPSAIPLLLRTIGHHYFSINNSTSTRNDQAPYSAVS 50
          MQTYKGRGDLLLALPSAIPLLLRTIGHHYFSINNSTSTRNDQAPYSAV+
Sbjct: 1  MQTYKGRGDLLLALPSAIPLLLRTIGHHYFSINNSTSTRNDQAPYSAVT 49

The following BLAST results are available for this feature:
BLAST of CsGy4G009090 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53717.12.9e-1897.96hypothetical protein Csa_4G110040 [Cucumis sativus][more]
BLAST of CsGy4G009090 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy4G009090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy4G009090 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KZB1|A0A0A0KZB1_CUCSA1.9e-1897.96Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G110040 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G009090.1CsGy4G009090.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy4G009090Csa4G110040Cucumber (Chinese Long) v2cgybcuB165
CsGy4G009090CsaV3_4G009490Cucumber (Chinese Long) v3cgybcucB171
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy4G009090Cucurbita maxima (Rimu)cgybcmaB495
CsGy4G009090Cucurbita maxima (Rimu)cgybcmaB545
CsGy4G009090Cucurbita moschata (Rifu)cgybcmoB468
CsGy4G009090Cucurbita moschata (Rifu)cgybcmoB518
CsGy4G009090Cucurbita pepo (Zucchini)cgybcpeB488
CsGy4G009090Cucurbita pepo (Zucchini)cgybcpeB505
CsGy4G009090Bottle gourd (USVL1VR-Ls)cgyblsiB259
CsGy4G009090Melon (DHL92) v3.5.1cgybmeB273
CsGy4G009090Melon (DHL92) v3.6.1cgybmedB271
CsGy4G009090Watermelon (Charleston Gray)cgybwcgB253
CsGy4G009090Watermelon (97103) v1cgybwmB272
CsGy4G009090Wild cucumber (PI 183967)cgybcpiB168
CsGy4G009090Silver-seed gourdcarcgybB0384
CsGy4G009090Silver-seed gourdcarcgybB0861
CsGy4G009090Watermelon (97103) v2cgybwmbB261
CsGy4G009090Wax gourdcgybwgoB344