CsGy4G006880 (gene) Cucumber (Gy14) v2

NameCsGy4G006880
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr4 : 4994865 .. 4999598 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATGAGGATCAAGTGGAGAGGGACAAGTTGGTTGAGAGTGATCGGGAAGATGGTGATATTCCAATTTTAATGTTGAACGATGTTGTGGGACAACTTTTAAGCCTTTAAGATTAATGGTTAGTGGAAGATGGTTGTTGTATTGTACTTCAGAAAGGAAAGGGAGAATGTGATTGCATTTGCACTGCAGAAATTAACAAATGCCTATTGGAGAAATAAAAATGCTTTATTAACTTAGTGGTTAGTTTGTTTGTACAGATGAGTTTCTGTGTATTTGGATTACTGAAAAATAAAGAAAGTATCACTCAAGGATGAGAGGTGCAGACAGATAGAAGAAGAGAGAAGTTTAGTTAGACTCAAACTCTCTACATAACTCAAACTAGGTGGAAGCAATCCTGCAATCAAATGAATGTTTGCTGTAAATTATGGGCATGCCCCTCAAACACTGAAATAACGCATCCTTCAAAGAAGATTTTCTCAACTAAAGTTTTGTTTCCAATCAACTTTGTTTAGCCTCACATTCATTCTAGATTTTGTTTGTTTACTAAAAGGTGGAATTCAGAAGTATTTGCTTGCTTGTGTATTTCTTTTTGAGATGGGATGGTTGATGTGCTTTAAAGATCTTTGGATCAGAAAGGACAAGATATGGGAGGAAAACTTAAAAGCCATATTACATGGTAAAGACGGAGTCGGGATGGCAGAGATTAACAAAATTCTCTCTCCCCAATTCAATGATCCAAGTCTAAAAAATAAGGAAACGGAAAGTCAGAAAGATAACAGGTCAATAAGGATTTACCTTGTTTTTCCATTGTTCTTTATATGTTTATGCCATACTTCAAATCACTGGATCTATTTCCATGTCATAAATGGCTAAATCAAATTTCCTCTTCACCACCAATGTTCATCAAATTCATTCATTGTTGATCTTTTTCTTTCCTAAATTATGTCTGTGCTAAACTTTGTTCTATATAAACATCATTTTCTTTTTTCCTTTCCCTACATGTTAGGCATGGCAACAGGTGAGAAAAAAGTTGATAAGCTCTGACCGTTGACCATTTTTTGGTAACATCCTTTTATTCTTCTATACCTCTTCAAAAACCTCGTGCTTTTCATATTTTGATCTTGCATGTTAGTTTGTTCAATATCAATGTCGCTGCGGCAAAAGTGCGGCTTTTCGTTCTTCTTGACATCTATATTTCAAGTGCGTTTGAAGGTTGTTCTGACCTGAAAATTAAGCGCACTTTTGCTGAATCATTAAAAATAGATTATCGTTCCTTTACTTTTACTTTATGGCATCTACTGATCTGACTTGAAATTTAGCATTTGCACTCGTGATATCCATAATCTATCTGGATTCTCTCTGGTGTCTTTTAGGCCATTTACATATCTACTTATTTTTCTTTTAATTGGACAATGTAGGTTTATTTTTAATGCAACTTTTCTTAGAAAAAAAAAAAAAGTGGAATGAAGAACCCATTAAGACTGGGCGGTCTAAATTTAACCCGAGATACTACTACAGAGAATCCAGGCCCCGTGTTTCATTATATTTCTATGGTCCCACTGTTCTAAAGCTTCTGCTTTTAGGTTCTTTTCTTTTCCCTCTGAAATGACTTTTGAGGGTATTGAATTAAATTTTTTGGTATGGACAAGTGTTAAATATATACACAGAAAGTTCTCTAGGCGATGTTTGGCTTAGGATTTAATACGTCTTGGGTTAAGAAATTTGGATTTGTATAACATATGTTTGGGTTGTAAGAAGGAGTAAGTTATAGAAACTTGGATTCGTGTCACACGTGTTTGGTTCATGAGTTTCTAATTTGGAAAGAGATTTTAGAGACTTCTTAGTTGGAAATCACTCATCTTTTGTGACAATGTAGATGGGAATTTTTTAATATTGGTTATCACTAAATAAGGTGAAAGCTGTTCTAAACTGCCCTCAACCTAGAACAAATGAATTTATTTTGATCTATTGAAAAGAGAAGAAACAGATATAGGATGTATCAACTAACAACAACCAATTGTTGTATAGGGATTTGCTTGGAGAAATTTTTACCGCAAAAGCACAGTTGCTAGCAATTATTTTAAAAGCTAGATAGATAAATGAACAACTCCACTTCTTTGTTCTTTCAAATACTAGGAGATTAGGCTGTCCTGAATAATTAATTCTCTCACATCTTTGTTACACGAGTAGGCTCATTCAAGCTTGAATGAATAATCCCAAATGTTGAGCACTTTAAAGTTAAACTCTTTCAAGGTCCAGTATAGTTTTTTCATCTGGAGTTATTGTTGAAATTGAAACTTAATCTACAGTATATTGTAGGCATCAATTTGGAGGAAACTTTCTCTTATCAATTCCTTGTTCCAACATTCCCGATCCATCGTAAAAAAAATGTTACATTACTCTCCCTTTAAGTTTCCTGAACCTTGATGGATTCTTAAGAGTCATCTGCTGTATTTGTGTCAGCATGTCGTTGCGAATCCTTTCTAGAACACTCTCCAAACTTGCTCCTTGATAAAATTAAATACTTAGGATTCATTTCATCATGTGATTTGGGATGGGAGCCTTAGGTATTACCCACTTTGACTTCGTGGAAGAGCTAACAACATAACTGATTGAATACATCTCATAGCCAAGTCAATTCAATCAGAACACGAATTCATTTCGATCATGATGCTCTATCTCAACACATTCCATTATGATCGGTACAACTTGATAGCAATTACTATTTATGTCAGACTGTTTGTTGTTTTCAACTTTTTTTTTTTTTTTTGGTTATGTTGAATAATTAAATATTTTCCTCCGTAAGAAAAATGGAAAATTACTTTTGGGCTTTTATCCCAAGCTCCTAATGGACACGGTGCCAATTTTCTCCAGTGGAACAAACGCGGTCCACCCTAAGCAAGAAAGGATTTCTTCAAGGGTATTTCCATTTTCAAATATATCGTGAATATAACAATACTCGGATGTCAAATATAAGGGGAAATGAAGGATGAGCTTGCCCAAGTCCACCCTAAACCTTAAACCCAAAGGCCAACGATACAGTATTTCATGTACTTGAGTCATGCTCATGCTTACTATTAATGTTTGAATTCATACATTAATAGAGTGATATTACAATTGTGAGAGGTTGATTGAAAACAACGAACTACATAAGGGGACAAAACTAAGGAATTTATCCATTTGAATTTTAACTGTGCTCCCGTGTTCATAAAATATAAAATTGAGACGAGGACGAGGAAGACATCTTGGGTTTTTGACCCTGGGCTGCCCAATTCCTCCTTATGTGCATAAACGCCCAAAAGTCTAATCCAACCAACGAACTCCTTTATTAGTATTGAGTTCCATTGCTGGTAGATATAATGAAATGTTAATTAAAATAATGATGTGAAAAACTGCTCATATTCAACAAATATCAACAAATTGGAATAATACACAATTCTTCCTTATTGGTTCTCTTAACCATAGTTTGTTTGTTAGTATATTTGTTGCACTACACTTACTATTTTGACCTTTGTTTGTTTGTTATGAGTCAATATCTTGTATTTAAATTATGAAGAGTGAAATAAGAAAAAATAACTCACTCCCATTTACCCAACACCCTGATCCTATATTCAAATTCTTGAGATATTATTTTCTACATGTTTTAAATATAAAAGTGAAGAGTGTTGAATTTAATTAATATTAAATTTATCTTCACGTATCAACCTTAAGCTTTTAGGTCAATTCATGATTTAACACATCAGACAACTTGTGTGCTAACAATTTCTAGTGTTGCATATTTGCGTCTAAACATGATTGTTGAAATCGCTGTCAATGATGGTTGACGATCGAGAAAGCAGCCACCAGTAAAGCTAGAAAGCAAAGGAAGAACAAGATTTATATCATGCAACTAGGAAAATTTTATAGATACAACTTGTGATTTTACCGGTACTTTTAAATTTTCAATTGTACCCCACCTTCTCTTAAAAAAAAAGTCACAAGGGTAAATAATGAATAGCTTTATCTTCAAAAGAAAAAAAAGATTATTTATTAAAATAAAAATAAGTTGATTTTGATTAAATTAATGTGCCACTTGAATAAATTCAATAACATAAAACATTGTTTGTTTATTTATTATTATTTTGACTAAATACACTTCTAATTTTCAACGCTACCTTTAATTTACAATGAGAATTTCATTTGGAAACTACTTTAAAACTCTTAAAATTATATATAAACAATTCCTCACCCACCATAAGAACTCGCATATTCTTTCAATATATGGATAACTTATTGATTTGGATGTACATATTATTATTTTGGATATAGGATCCAATTCTATTTTGTCTTCTAGACTTTTTTCTTCATTTATTTTCATTTTTAGAAACATTTATTTATTCTTTTATTCTTATAAACTTAAAATATTGAACCACTGTGCCTCTAAAAGTACTTTCAAATTTATTTCATTTTTTTAATATTTATTTTAGTTCCTATTTTTTAATTAACCATTTTTGTTATTGTTAGTAATTGCCCTTCATGATAGTAATTACGTTGGTGAACTCTCTTTAGCATTTTGATATATATATGTATATTGGTCAGGTTGTTGATGGCTTTTTCCAAGTTGATTGGATCCAAAGAGGAAGGGATGGATTTTTCTTCCTTATTTGAAAAACGTGTTATATAAAGAGGAGGAATTATAGAGAATATATAAAATAATTTTTTTAAAAAAAAAAAGAGAAAGAAATAGTTTTAATTCT

mRNA sequence

AATGAGGATCAAGTGGAGAGGGACAAGTTGGTTGAGAGTGATCGGGAAGATGGTGGAATTCAGAAGTATTTGCTTGCTTGTGTATTTCTTTTTGAGATGGGATGGTTGATGTGCTTTAAAGATCTTTGGATCAGAAAGGACAAGATATGGGAGGAAAACTTAAAAGCCATATTACATGGTAAAGACGGAGTCGGGATGGCAGAGATTAACAAAATTCTCTCTCCCCAATTCAATGATCCAAGTCTAAAAAATAAGGAAACGGAAAGTCAGAAAGATAACAGGTTGTTGATGGCTTTTTCCAAGTTGATTGGATCCAAAGAGGAAGGGATGGATTTTTCTTCCTTATTTGAAAAACGTGTTATATAAAGAGGAGGAATTATAGAGAATATATAAAATAATTTTTTTAAAAAAAAAAAGAGAAAGAAATAGTTTTAATTCT

Coding sequence (CDS)

AATGAGGATCAAGTGGAGAGGGACAAGTTGGTTGAGAGTGATCGGGAAGATGGTGGAATTCAGAAGTATTTGCTTGCTTGTGTATTTCTTTTTGAGATGGGATGGTTGATGTGCTTTAAAGATCTTTGGATCAGAAAGGACAAGATATGGGAGGAAAACTTAAAAGCCATATTACATGGTAAAGACGGAGTCGGGATGGCAGAGATTAACAAAATTCTCTCTCCCCAATTCAATGATCCAAGTCTAAAAAATAAGGAAACGGAAAGTCAGAAAGATAACAGGTTGTTGATGGCTTTTTCCAAGTTGATTGGATCCAAAGAGGAAGGGATGGATTTTTCTTCCTTATTTGAAAAACGTGTTATATAA

Protein sequence

NEDQVERDKLVESDREDGGIQKYLLACVFLFEMGWLMCFKDLWIRKDKIWEENLKAILHGKDGVGMAEINKILSPQFNDPSLKNKETESQKDNRLLMAFSKLIGSKEEGMDFSSLFEKRVI
BLAST of CsGy4G006880 vs. NCBI nr
Match: XP_022136393.1 (uncharacterized protein LOC111008113 [Momordica charantia])

HSP 1 Score: 84.3 bits (207), Expect = 3.0e-13
Identity = 40/51 (78.43%), Postives = 44/51 (86.27%), Query Frame = 0

Query: 44  IRKDKIWEENLKAILHGKDGVGMAEINKILSPQFNDPSLKNKETESQKDNR 95
           +RKD+IWEENLKAIL GKDGVGM E+NKILSPQFND SL+N E E QKD R
Sbjct: 56  LRKDRIWEENLKAILCGKDGVGMPEVNKILSPQFNDSSLRNMEMERQKDIR 106

BLAST of CsGy4G006880 vs. NCBI nr
Match: XP_023880104.1 (uncharacterized protein LOC111992479 [Quercus suber] >POF22992.1 hypothetical protein CFP56_15669 [Quercus suber])

HSP 1 Score: 58.9 bits (141), Expect = 1.4e-05
Identity = 28/51 (54.90%), Postives = 37/51 (72.55%), Query Frame = 0

Query: 44  IRKDKIWEENLKAILHGKDGVGMAEINKILSPQFNDPSLKNKETESQKDNR 95
           I+KDKIWE+NL  +L GKD VG+ EI K+LSPQFN     N E+++  DN+
Sbjct: 91  IKKDKIWEDNLNKLLRGKDRVGLPEIAKLLSPQFNQQGGMNSESKTD-DNK 140

BLAST of CsGy4G006880 vs. NCBI nr
Match: XP_019421169.1 (PREDICTED: uncharacterized protein LOC109331245 [Lupinus angustifolius] >OIV94395.1 hypothetical protein TanjilG_25457 [Lupinus angustifolius])

HSP 1 Score: 58.5 bits (140), Expect = 1.8e-05
Identity = 28/57 (49.12%), Postives = 40/57 (70.18%), Query Frame = 0

Query: 39  FKDLWIRKDKIWEENLKAILHGKDGVGMAEINKILSPQFNDPSLKNKE--TESQKDN 94
           FK   I+KDKIWE+NL+ +L GK+ +G  E+ KILSP+F+  ++  KE  T+S  DN
Sbjct: 74  FKSPGIKKDKIWEQNLQTLLRGKNSIGFPEVAKILSPEFSQGAINIKESNTDSFADN 130

BLAST of CsGy4G006880 vs. NCBI nr
Match: XP_019445132.1 (PREDICTED: uncharacterized protein LOC109348963 [Lupinus angustifolius] >OIW10782.1 hypothetical protein TanjilG_27728 [Lupinus angustifolius])

HSP 1 Score: 58.2 bits (139), Expect = 2.3e-05
Identity = 27/57 (47.37%), Postives = 40/57 (70.18%), Query Frame = 0

Query: 39  FKDLWIRKDKIWEENLKAILHGKDGVGMAEINKILSPQFNDP--SLKNKETESQKDN 94
           FK   I+KDKIWE+NL+ +L GK+ +G  E+ KILSP+F+    ++K+  T+S  DN
Sbjct: 74  FKSPGIKKDKIWEQNLQTLLRGKNSIGFPEVAKILSPEFSQGAINIKDSSTDSFADN 130

BLAST of CsGy4G006880 vs. NCBI nr
Match: XP_018808694.1 (PREDICTED: uncharacterized protein LOC108981895 [Juglans regia])

HSP 1 Score: 57.8 bits (138), Expect = 3.0e-05
Identity = 28/56 (50.00%), Postives = 35/56 (62.50%), Query Frame = 0

Query: 36  LMCFKDLWIRKDKIWEENLKAILHGKDGVGMAEINKILSPQFNDPSLKNKETESQK 92
           L  F+   I+KD IWE+NL  +L GKD VG+ EI K+LSPQFN     N  +E  K
Sbjct: 69  LYTFRSPGIKKDNIWEDNLNKMLQGKDRVGLPEIAKLLSPQFNHQGGMNATSEDSK 124

BLAST of CsGy4G006880 vs. TrEMBL
Match: tr|A0A2N9FY31|A0A2N9FY31_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23399 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.1e-06
Identity = 28/51 (54.90%), Postives = 38/51 (74.51%), Query Frame = 0

Query: 44  IRKDKIWEENLKAILHGKDGVGMAEINKILSPQFNDPSLKNKETESQKDNR 95
           I+KD IWE+NL  +LHGKD VG+ EI K+LSPQFN     N E++++ DN+
Sbjct: 89  IKKDNIWEDNLNKLLHGKDRVGLPEIAKLLSPQFNQKGGMNAESKTE-DNK 138

BLAST of CsGy4G006880 vs. TrEMBL
Match: tr|A0A2P4MZQ3|A0A2P4MZQ3_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_15669 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 9.0e-06
Identity = 28/51 (54.90%), Postives = 37/51 (72.55%), Query Frame = 0

Query: 44  IRKDKIWEENLKAILHGKDGVGMAEINKILSPQFNDPSLKNKETESQKDNR 95
           I+KDKIWE+NL  +L GKD VG+ EI K+LSPQFN     N E+++  DN+
Sbjct: 91  IKKDKIWEDNLNKLLRGKDRVGLPEIAKLLSPQFNQQGGMNSESKTD-DNK 140

BLAST of CsGy4G006880 vs. TrEMBL
Match: tr|A0A2I4DNG8|A0A2I4DNG8_9ROSI (uncharacterized protein LOC108981895 OS=Juglans regia OX=51240 GN=LOC108981895 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.0e-05
Identity = 28/56 (50.00%), Postives = 35/56 (62.50%), Query Frame = 0

Query: 36  LMCFKDLWIRKDKIWEENLKAILHGKDGVGMAEINKILSPQFNDPSLKNKETESQK 92
           L  F+   I+KD IWE+NL  +L GKD VG+ EI K+LSPQFN     N  +E  K
Sbjct: 69  LYTFRSPGIKKDNIWEDNLNKMLQGKDRVGLPEIAKLLSPQFNHQGGMNATSEDSK 124

BLAST of CsGy4G006880 vs. TrEMBL
Match: tr|G7K410|G7K410_MEDTR (SWIB/MDM2 domain protein OS=Medicago truncatula OX=3880 GN=11405829 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.4e-05
Identity = 27/60 (45.00%), Postives = 41/60 (68.33%), Query Frame = 0

Query: 36  LMCFKDLWIRKDKIWEENLKAILHGKDGVGMAEINKILSPQFNDP--SLKNKETESQKDN 94
           L  F+   I+KDK+WE+NL+ +L G++ VG  EI KILSP+F+    ++K+  T+S  DN
Sbjct: 61  LYSFRSPGIKKDKLWEQNLQTLLRGRNSVGFPEIAKILSPEFSQGAINIKDTSTDSSTDN 120

BLAST of CsGy4G006880 vs. TrEMBL
Match: tr|A0A1S3UFY8|A0A1S3UFY8_VIGRR (uncharacterized protein LOC106764991 OS=Vigna radiata var. radiata OX=3916 GN=LOC106764991 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.8e-05
Identity = 31/73 (42.47%), Postives = 47/73 (64.38%), Query Frame = 0

Query: 39  FKDLWIRKDKIWEENLKAILHGKDGVGMAEINKILSPQFNDPSL--KNKETESQKDNRLL 98
           F+   I+KDKIWE+NL+ +L G++ VG  EI KILSP+F+  ++  K+   +S  DN   
Sbjct: 61  FRSPGIKKDKIWEQNLQNLLRGRNSVGFPEIAKILSPEFSQGAINVKDNNMDSSMDN--- 120

Query: 99  MAFSKLIGSKEEG 110
              +K  GSK++G
Sbjct: 121 ---TKGKGSKKKG 127

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022136393.13.0e-1378.43uncharacterized protein LOC111008113 [Momordica charantia][more]
XP_023880104.11.4e-0554.90uncharacterized protein LOC111992479 [Quercus suber] >POF22992.1 hypothetical pr... [more]
XP_019421169.11.8e-0549.12PREDICTED: uncharacterized protein LOC109331245 [Lupinus angustifolius] >OIV9439... [more]
XP_019445132.12.3e-0547.37PREDICTED: uncharacterized protein LOC109348963 [Lupinus angustifolius] >OIW1078... [more]
XP_018808694.13.0e-0550.00PREDICTED: uncharacterized protein LOC108981895 [Juglans regia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A2N9FY31|A0A2N9FY31_FAGSY3.1e-0654.90Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23399 PE=4 SV=1[more]
tr|A0A2P4MZQ3|A0A2P4MZQ3_QUESU9.0e-0654.90Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_15669 PE=4 SV=1[more]
tr|A0A2I4DNG8|A0A2I4DNG8_9ROSI2.0e-0550.00uncharacterized protein LOC108981895 OS=Juglans regia OX=51240 GN=LOC108981895 P... [more]
tr|G7K410|G7K410_MEDTR3.4e-0545.00SWIB/MDM2 domain protein OS=Medicago truncatula OX=3880 GN=11405829 PE=4 SV=1[more]
tr|A0A1S3UFY8|A0A1S3UFY8_VIGRR5.8e-0542.47uncharacterized protein LOC106764991 OS=Vigna radiata var. radiata OX=3916 GN=LO... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G006880.1CsGy4G006880.1mRNA