CsGy4G002530 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G002530
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	GEM-like protein 5
Location	Chr4 : 1604028 .. 1605163 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGGAACATCCGAAGATCCTAAACCCACTGAATCTCATCCCTCCCCTGCACCGCCGCCGTCGACGGAGGACGAATCAAAGAAATGGGGAACACACGTCATGGGACCACCAGCAGCCCCCACCGAACATCCGGATAACCAGAAGGCAGCGTTCTGGAACGCCGCCTCTCAGCAGCAGATTCACCACCATCCGTACGTTCAGTACTCTCCGGTGGATCATCGGCCAAGTTCCAACCCGTTGGAGCCCGTGGTACACGCCTTCAATTCCTGGAGCAACAAAGCAGAGACGTTCGCGCGTAACATTTGGCACAATCGTAAGTTGAATTTAGCGTTAGATTGAAACTAGGGTATCTGGTTTGTTTTGGTTTTTTGTTTTGTTTTGTTTTGTTTGTTTTTCATTCGATTTAGGGATTTTGGAACTGTAATTTTTGTAGTGAGGACTGGGCAGTCGATGTCGGAAGCGGCTTGGGGGAAAGTGAATTTGACGGCGAAGGCTATAACGGAAGGGGGATTTGAGTCTTTGTTTAAGCAGACGTTCGCGACGGAGGTGAATGAGAAATTGATGAAAAGCTTTGCTTGCTATCTCTCCACCGCGACGGGTCCGGTGGCCGGAACCTTGTATTTGTCGACGGTGCGTGTGGCGTTTTGTAGCGATCGCCCACTTTACTTCACTGCCCCCTCTGGTCAACCGTCTTGGAGCTACTACAAGGTAAACTCGTGCCTCAGTTTTATTAGTATAGTCTTATTAAACTTATTAATAGATGTTGCTGAAAATGAGCTGGTGGAAGCATAAGTTAAAAGGATAAAATTCTACCTTTAAGGATGAAGTTGAAATAAAATCCAAATTCTGTGGATGAAATCATAACATTTTGAATTTAGAGGAGTTTTGAACGGATTATTATTGTTTGAAATACAGATCCAAAATGTAACTTTCTCCCCCAAAAAAATGTTATTTTGTGTAGTTCATATGATTTACTAATTTCTCTCTTTTTAACCGATGAAAAAAAGGGTTGAACAAAAAACTGAATTGAACATGAGAATCATGCATTAATTATCTGATAGAATTTTTTGTATTTTTGGAAATATTTTAGTAATCTTTATATGGGTAGTAAGAAGATGCACGAATATGCATGA

mRNA sequence

ATGGCCGGAACATCCGAAGATCCTAAACCCACTGAATCTCATCCCTCCCCTGCACCGCCGCCGTCGACGGAGGACGAATCAAAGAAATGGGGAACACACGTCATGGGACCACCAGCAGCCCCCACCGAACATCCGGATAACCAGAAGGCAGCGTTCTGGAACGCCGCCTCTCAGCAGCAGATTCACCACCATCCGTACGTTCAGTACTCTCCGGTGGATCATCGGCCAAGTTCCAACCCGTTGGAGCCCGTGGTACACGCCTTCAATTCCTGGAGCAACAAAGCAGAGACGTTCGCGCGTAACATTTGGCACAATCTGAGGACTGGGCAGTCGATGTCGGAAGCGGCTTGGGGGAAAGTGAATTTGACGGCGAAGGCTATAACGGAAGGGGGATTTGAGTCTTTGTTTAAGCAGACGTTCGCGACGGAGGTGAATGAGAAATTGATGAAAAGCTTTGCTTGCTATCTCTCCACCGCGACGGGTCCGGTGGCCGGAACCTTGTATTTGTCGACGGTGCGTGTGGCGTTTTGTAGCGATCGCCCACTTTACTTCACTGCCCCCTCTGGTCAACCGTCTTGGAGCTACTACAAGGTAAACTCTAATCTTTATATGGGTAGTAAGAAGATGCACGAATATGCATGA

Coding sequence (CDS)

ATGGCCGGAACATCCGAAGATCCTAAACCCACTGAATCTCATCCCTCCCCTGCACCGCCGCCGTCGACGGAGGACGAATCAAAGAAATGGGGAACACACGTCATGGGACCACCAGCAGCCCCCACCGAACATCCGGATAACCAGAAGGCAGCGTTCTGGAACGCCGCCTCTCAGCAGCAGATTCACCACCATCCGTACGTTCAGTACTCTCCGGTGGATCATCGGCCAAGTTCCAACCCGTTGGAGCCCGTGGTACACGCCTTCAATTCCTGGAGCAACAAAGCAGAGACGTTCGCGCGTAACATTTGGCACAATCTGAGGACTGGGCAGTCGATGTCGGAAGCGGCTTGGGGGAAAGTGAATTTGACGGCGAAGGCTATAACGGAAGGGGGATTTGAGTCTTTGTTTAAGCAGACGTTCGCGACGGAGGTGAATGAGAAATTGATGAAAAGCTTTGCTTGCTATCTCTCCACCGCGACGGGTCCGGTGGCCGGAACCTTGTATTTGTCGACGGTGCGTGTGGCGTTTTGTAGCGATCGCCCACTTTACTTCACTGCCCCCTCTGGTCAACCGTCTTGGAGCTACTACAAGGTAAACTCTAATCTTTATATGGGTAGTAAGAAGATGCACGAATATGCATGA

Protein sequence

MAGTSEDPKPTESHPSPAPPPSTEDESKKWGTHVMGPPAAPTEHPDNQKAAFWNAASQQQIHHHPYVQYSPVDHRPSSNPLEPVVHAFNSWSNKAETFARNIWHNLRTGQSMSEAAWGKVNLTAKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLSTVRVAFCSDRPLYFTAPSGQPSWSYYKVNSNLYMGSKKMHEYA

Homology

[Close]

BLAST of CsGy4G002530 vs. NCBI nr
Match: XP_011653028.1 (PREDICTED: GEM-like protein 5 [Cucumis sativus] >KGN53000.1 hypothetical protein Csa_4G010990 [Cucumis sativus])

HSP 1 Score: 408.3 bits (1048), Expect = 1.6e-110
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MAGTSEDPKPTESHPSPAPPPSTEDESKKWGTHVMGPPAAPTEHPDNQKAAFWNAASQQQ 60
           MAGTSEDPKPTESHPSPAPPPSTEDESKKWGTHVMGPPAAPTEHPDNQKAAFWNAASQQQ
Sbjct: 1   MAGTSEDPKPTESHPSPAPPPSTEDESKKWGTHVMGPPAAPTEHPDNQKAAFWNAASQQQ 60

Query: 61  IHHHPYVQYSPVDHRPSSNPLEPVVHAFNSWSNKAETFARNIWHNLRTGQSMSEAAWGKV 120
           IHHHPYVQYSPVDHRPSSNPLEPVVHAFNSWSNKAETFARNIWHNLRTGQSMSEAAWGKV
Sbjct: 61  IHHHPYVQYSPVDHRPSSNPLEPVVHAFNSWSNKAETFARNIWHNLRTGQSMSEAAWGKV 120

Query: 121 NLTAKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLSTVRVAFCSDR 180
           NLTAKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLSTVRVAFCSDR
Sbjct: 121 NLTAKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLSTVRVAFCSDR 180

Query: 181 PLYFTAPSGQPSWSYYKV 199
           PLYFTAPSGQPSWSYYKV
Sbjct: 181 PLYFTAPSGQPSWSYYKV 198

[Close]

BLAST of CsGy4G002530 vs. NCBI nr
Match: XP_008454090.1 (PREDICTED: GEM-like protein 5 [Cucumis melo])

HSP 1 Score: 397.5 bits (1020), Expect = 2.8e-107
Identity = 192/198 (96.97%), Postives = 194/198 (97.98%), Query Frame = 0


Query: 1   MAGTSEDPKPTESHPSPAPPPSTEDESKKWGTHVMGPPAAPTEHPDNQKAAFWNAASQQQ 60
           MAGTS DPKPTESHPSPAPPPSTEDESKKWGTHVMGPPAAPTEHPDNQKAAFWNAA+QQQ
Sbjct: 1   MAGTSGDPKPTESHPSPAPPPSTEDESKKWGTHVMGPPAAPTEHPDNQKAAFWNAAAQQQ 60

Query: 61  IHHHPYVQYSPVDHRPSSNPLEPVVHAFNSWSNKAETFARNIWHNLRTGQSMSEAAWGKV 120
           IHHHPYVQYSPVDHRPSSNPLEPVVHAFNSWSNKAETFARNIWHNLRTG SMSEAAWGKV
Sbjct: 61  IHHHPYVQYSPVDHRPSSNPLEPVVHAFNSWSNKAETFARNIWHNLRTGPSMSEAAWGKV 120

Query: 121 NLTAKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLSTVRVAFCSDR 180
           NLTAKAITEGGFESLFKQTF TE NEKL+KSFACYLSTATGPVAGTLYLSTVRVAFCSDR
Sbjct: 121 NLTAKAITEGGFESLFKQTFVTEANEKLVKSFACYLSTATGPVAGTLYLSTVRVAFCSDR 180

Query: 181 PLYFTAPSGQPSWSYYKV 199
           PLYFTAPSGQPSWSYYKV
Sbjct: 181 PLYFTAPSGQPSWSYYKV 198

[Close]

BLAST of CsGy4G002530 vs. NCBI nr
Match: XP_022955795.1 (GEM-like protein 5 [Cucurbita moschata])

HSP 1 Score: 373.2 bits (957), Expect = 5.7e-100
Identity = 179/198 (90.40%), Postives = 186/198 (93.94%), Query Frame = 0


Query: 1   MAGTSEDPKPTESHPSPAPPPSTEDESKKWGTHVMGPPAAPTEHPDNQKAAFWNAASQQQ 60
           MAG SE PKPTES  SP PPPSTE+ESKKWGTHVMGPPAAP+EHPDN KAAFWNAA QQ+
Sbjct: 1   MAGASEHPKPTESQASPVPPPSTEEESKKWGTHVMGPPAAPSEHPDNHKAAFWNAADQQK 60

Query: 61  IHHHPYVQYSPVDHRPSSNPLEPVVHAFNSWSNKAETFARNIWHNLRTGQSMSEAAWGKV 120
           IHHHPYVQYSP+DHRPS+NP EPVVHAFNSWSNKAET ARNIWHNLRTG SMSEAAWGK+
Sbjct: 61  IHHHPYVQYSPMDHRPSTNPFEPVVHAFNSWSNKAETMARNIWHNLRTGPSMSEAAWGKL 120

Query: 121 NLTAKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLSTVRVAFCSDR 180
           NLTAKAITEGGFESLFKQTFATE NEKLMKSFACYLSTATGPVAGTLYLSTVR+ FCSDR
Sbjct: 121 NLTAKAITEGGFESLFKQTFATEPNEKLMKSFACYLSTATGPVAGTLYLSTVRLGFCSDR 180

Query: 181 PLYFTAPSGQPSWSYYKV 199
           PLYFTAPSGQPSWSYYKV
Sbjct: 181 PLYFTAPSGQPSWSYYKV 198

[Close]

BLAST of CsGy4G002530 vs. NCBI nr
Match: XP_023527116.1 (GEM-like protein 5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.9 bits (956), Expect = 7.5e-100
Identity = 179/198 (90.40%), Postives = 185/198 (93.43%), Query Frame = 0


Query: 1   MAGTSEDPKPTESHPSPAPPPSTEDESKKWGTHVMGPPAAPTEHPDNQKAAFWNAASQQQ 60
           MAG SE PKPTES  SP PPPSTE+ESKKWGTHVMGPPAAP+EHPDN KAAFWNAA QQ+
Sbjct: 1   MAGASEHPKPTESQASPVPPPSTEEESKKWGTHVMGPPAAPSEHPDNHKAAFWNAADQQK 60

Query: 61  IHHHPYVQYSPVDHRPSSNPLEPVVHAFNSWSNKAETFARNIWHNLRTGQSMSEAAWGKV 120
           IHHHPYVQYSPVDHRPS+NP EPVVHAFNSWSNKAET ARNIWHNLRTG SMSEAAWGK+
Sbjct: 61  IHHHPYVQYSPVDHRPSTNPFEPVVHAFNSWSNKAETMARNIWHNLRTGPSMSEAAWGKL 120

Query: 121 NLTAKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLSTVRVAFCSDR 180
           NLTAKAITEGGFESLFKQTFATE NEKLMKSFACYLSTATGPVAGTLYLST R+ FCSDR
Sbjct: 121 NLTAKAITEGGFESLFKQTFATEPNEKLMKSFACYLSTATGPVAGTLYLSTARLGFCSDR 180

Query: 181 PLYFTAPSGQPSWSYYKV 199
           PLYFTAPSGQPSWSYYKV
Sbjct: 181 PLYFTAPSGQPSWSYYKV 198

[Close]

BLAST of CsGy4G002530 vs. NCBI nr
Match: BAI52950.1 (GRAM domain-containing protein [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 372.1 bits (954), Expect = 1.3e-99
Identity = 179/198 (90.40%), Postives = 186/198 (93.94%), Query Frame = 0


Query: 1   MAGTSEDPKPTESHPSPAPPPSTEDESKKWGTHVMGPPAAPTEHPDNQKAAFWNAASQQQ 60
           MAGTSEDPKP ES  SP+PPPSTEDESKKWGTH+MG PAAP EHPDN KAAFWNAA+QQQ
Sbjct: 1   MAGTSEDPKPAESQASPSPPPSTEDESKKWGTHIMGAPAAPNEHPDNYKAAFWNAAAQQQ 60

Query: 61  IHHHPYVQYSPVDHRPSSNPLEPVVHAFNSWSNKAETFARNIWHNLRTGQSMSEAAWGKV 120
           I+HHPYVQYSPVDHRPS+NP EPVVHAFNSWSNKAE+ ARNIWHNLRTG SMS AAWGK+
Sbjct: 61  IYHHPYVQYSPVDHRPSTNPFEPVVHAFNSWSNKAESIARNIWHNLRTGPSMSGAAWGKL 120

Query: 121 NLTAKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLSTVRVAFCSDR 180
           NLTAKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLST RV FCSDR
Sbjct: 121 NLTAKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLSTARVGFCSDR 180

Query: 181 PLYFTAPSGQPSWSYYKV 199
           PLYFTAPSGQPSWSYYKV
Sbjct: 181 PLYFTAPSGQPSWSYYKV 198

[Close]

BLAST of CsGy4G002530 vs. TAIR10
Match: AT5G13200.1 (GRAM domain family protein)

HSP 1 Score: 274.2 bits (700), Expect = 6.6e-74
Identity = 135/193 (69.95%), Postives = 153/193 (79.27%), Query Frame = 0


Query: 6   EDPKPTESHPSPAPPPSTEDESKKWGTHVMGPPAAPTEHPDNQKAAFWNAASQQQIHHHP 65
           E PK  E+   P P  S+ D+ KKWGTHVMG PAAP  HPDNQ+AA W A   QQ  + P
Sbjct: 16  EQPKTLETEHQPEPSSSSPDQ-KKWGTHVMGAPAAPVAHPDNQQAAAWVAGDNQQTQYQP 75

Query: 66  YVQYSPVDHRPSSNPLEPVVHAFNSWSNKAETFARNIWHNLRTGQSMSEAAWGKVNLTAK 125
           YV YSPV+H  ++NPLEPV+  F++WS KAET ARN+WHNL+TG SMSE AWGKVNLTAK
Sbjct: 76  YVIYSPVEHPTTNNPLEPVIGMFHTWSRKAETVARNLWHNLKTGPSMSETAWGKVNLTAK 135

Query: 126 AITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLSTVRVAFCSDRPLYFT 185
           AIT+GGFESLF+Q F TE NE L K+FACYLST TGPVAGT+YLS  RVAFCSDRPLYFT
Sbjct: 136 AITKGGFESLFRQIFGTEPNETLKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRPLYFT 195

Query: 186 APSGQPSWSYYKV 199
           APSGQ SWSYY+V
Sbjct: 196 APSGQESWSYYRV 207

[Close]

BLAST of CsGy4G002530 vs. TAIR10
Match: AT2G22475.1 (GRAM domain family protein)

HSP 1 Score: 121.3 bits (303), Expect = 7.1e-28
Identity = 71/195 (36.41%), Postives = 104/195 (53.33%), Query Frame = 0


Query: 13  SHPSPAPPPSTEDESKKWGTHVMGPPAAPTEHPDNQKAAFWNAASQQQIHHHPYVQYSPV 72
           S  +P   PS      K   H      + ++ PD + A+   A S      +PY+  SP 
Sbjct: 51  SDSTPVKAPSRTSSGSKKSVHWSPELVSGSQEPDQKAASXXXAGS------NPYIARSPA 110

Query: 73  DHRPSS--NPLEPVVHAFNSW-------SNKAETFARNIWHNLRTGQSMSEAAWGKVNLT 132
           +   +S  + +E V      W       + K E+ A N W +LRT  S ++AA G++  +
Sbjct: 111 ETSDASLKDTMETVKGVLGRWGKRVAEAAKKTESLAGNTWQHLRTAPSFADAAMGRIAQS 170

Query: 133 AKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLSTVRVAFCSDRPLY 192
            K   EGG+E +F+QTF T+  E+L+ SFACYLST+ GPV G LY+S+ ++A+CSD PL 
Sbjct: 171 TKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKLAYCSDNPLS 230

Query: 193 FTAPSGQPSWSYYKV 199
           +     Q  WSYYKV
Sbjct: 231 Y-KNGDQTEWSYYKV 238

[Close]

BLAST of CsGy4G002530 vs. TAIR10
Match: AT1G28200.1 (FH interacting protein 1)

HSP 1 Score: 107.8 bits (268), Expect = 8.1e-24
Identity = 73/198 (36.87%), Postives = 100/198 (50.51%), Query Frame = 0


Query: 14  HPSPAPPPSTEDESKKWGTHVMG----PPAAPTE--HPDNQKAAFWNAASQQQIHHHPYV 73
           H   +  P+   E  K   H       P   PT+   P  Q      AA+      +PYV
Sbjct: 9   HGRISSTPAAASEPSKAAAHSSDYAPYPKLDPTDVTPPPPQPIPTGAAATTMPAESNPYV 68

Query: 74  QYSPVDHRPSSNPLEPVVHAFNSW-------SNKAETFARNIWHNLRTGQSMSEAAWGKV 133
             SP       N ++ V      W       + KAE  A N W +L+TG S+++AA  ++
Sbjct: 69  SPSPAPR----NTMDSVKDTLGKWGKMAADATKKAEDLAGNFWQHLKTGPSVADAAVSRI 128

Query: 134 NLTAKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLSTVRVAFCSDR 193
               K + EGG+E +FKQTF    +EKL+K++ACYLST+ GPV G +YLST ++AF SD 
Sbjct: 129 AQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLGVMYLSTHKLAFSSDN 188

Query: 194 PLYFTAPSGQPSWSYYKV 199
           PL +     Q  WSYYKV
Sbjct: 189 PLSY-KEGEQTLWSYYKV 201

[Close]

BLAST of CsGy4G002530 vs. TAIR10
Match: AT5G23370.1 (GRAM domain-containing protein / ABA-responsive protein-related)

HSP 1 Score: 82.4 bits (202), Expect = 3.7e-16
Identity = 49/154 (31.82%), Postives = 83/154 (53.90%), Query Frame = 0


Query: 59  QQIHHHPYVQYSPVDHRP---SSNPLE-PVVHAFNSWSNKA---------ETFARNIWHN 118
           QQ+   P V+ SP  + P   S N L+ P    F+  + K          ++F   +   
Sbjct: 8   QQLITFPAVKTSPAGYLPDPASINKLQIPTSSKFSFLTGKGKSMLRKKKNDSFTNGVRDQ 67

Query: 119 LRTGQSMSEAAWGKVNLTAKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAG 178
            + G  ++E    K++L A+ +  GG E ++K+ F     EKL K++ CYLST  GP+AG
Sbjct: 68  DKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAYQCYLSTTAGPIAG 127

Query: 179 TLYLSTVRVAFCSDRPLYFTAPSGQPSWSYYKVN 200
            L++S+ ++AFCS+R +   +P G+ +  +YKV+
Sbjct: 128 LLFISSKKIAFCSERSIKVASPQGELNRVHYKVS 161

[Close]

BLAST of CsGy4G002530 vs. TAIR10
Match: AT5G23350.1 (GRAM domain-containing protein / ABA-responsive protein-related)

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-15
Identity = 39/106 (36.79%), Postives = 63/106 (59.43%), Query Frame = 0


Query: 94  KAETFARNIWHNLRTGQSMSEAAWGKVNLTAKAITEGGFESLFKQTFATEVNEKLMKSFA 153
           K ++F        + G  ++E    K++L AK +  GG E ++K+ F     EKL K++ 
Sbjct: 118 KTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDQEKLFKAYQ 177

Query: 154 CYLSTATGPVAGTLYLSTVRVAFCSDRPLYFTAPSGQPSWSYYKVN 200
           CYLST  GP+AG L++S+ ++AFCS+R +   +P G  S  +YKV+
Sbjct: 178 CYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGVLSRVHYKVS 223

[Close]

BLAST of CsGy4G002530 vs. Swiss-Prot
Match: sp|Q9LYV6|GEML5_ARATH (GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.2e-72
Identity = 135/193 (69.95%), Postives = 153/193 (79.27%), Query Frame = 0


Query: 6   EDPKPTESHPSPAPPPSTEDESKKWGTHVMGPPAAPTEHPDNQKAAFWNAASQQQIHHHP 65
           E PK  E+   P P  S+ D+ KKWGTHVMG PAAP  HPDNQ+AA W A   QQ  + P
Sbjct: 16  EQPKTLETEHQPEPSSSSPDQ-KKWGTHVMGAPAAPVAHPDNQQAAAWVAGDNQQTQYQP 75

Query: 66  YVQYSPVDHRPSSNPLEPVVHAFNSWSNKAETFARNIWHNLRTGQSMSEAAWGKVNLTAK 125
           YV YSPV+H  ++NPLEPV+  F++WS KAET ARN+WHNL+TG SMSE AWGKVNLTAK
Sbjct: 76  YVIYSPVEHPTTNNPLEPVIGMFHTWSRKAETVARNLWHNLKTGPSMSETAWGKVNLTAK 135

Query: 126 AITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLSTVRVAFCSDRPLYFT 185
           AIT+GGFESLF+Q F TE NE L K+FACYLST TGPVAGT+YLS  RVAFCSDRPLYFT
Sbjct: 136 AITKGGFESLFRQIFGTEPNETLKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRPLYFT 195

Query: 186 APSGQPSWSYYKV 199
           APSGQ SWSYY+V
Sbjct: 196 APSGQESWSYYRV 207

[Close]

BLAST of CsGy4G002530 vs. Swiss-Prot
Match: sp|Q8S8F8|GEM_ARATH (GLABRA2 expression modulator OS=Arabidopsis thaliana OX=3702 GN=GEM PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-26
Identity = 71/195 (36.41%), Postives = 104/195 (53.33%), Query Frame = 0


Query: 13  SHPSPAPPPSTEDESKKWGTHVMGPPAAPTEHPDNQKAAFWNAASQQQIHHHPYVQYSPV 72
           S  +P   PS      K   H      + ++ PD + A+   A S      +PY+  SP 
Sbjct: 51  SDSTPVKAPSRTSSGSKKSVHWSPELVSGSQEPDQKAASXXXAGS------NPYIARSPA 110

Query: 73  DHRPSS--NPLEPVVHAFNSW-------SNKAETFARNIWHNLRTGQSMSEAAWGKVNLT 132
           +   +S  + +E V      W       + K E+ A N W +LRT  S ++AA G++  +
Sbjct: 111 ETSDASLKDTMETVKGVLGRWGKRVAEAAKKTESLAGNTWQHLRTAPSFADAAMGRIAQS 170

Query: 133 AKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLSTVRVAFCSDRPLY 192
            K   EGG+E +F+QTF T+  E+L+ SFACYLST+ GPV G LY+S+ ++A+CSD PL 
Sbjct: 171 TKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKLAYCSDNPLS 230

Query: 193 FTAPSGQPSWSYYKV 199
           +     Q  WSYYKV
Sbjct: 231 Y-KNGDQTEWSYYKV 238

[Close]

BLAST of CsGy4G002530 vs. Swiss-Prot
Match: sp|Q9SE96|GEML1_ARATH (GEM-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FIP1 PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.5e-22
Identity = 73/198 (36.87%), Postives = 100/198 (50.51%), Query Frame = 0


Query: 14  HPSPAPPPSTEDESKKWGTHVMG----PPAAPTE--HPDNQKAAFWNAASQQQIHHHPYV 73
           H   +  P+   E  K   H       P   PT+   P  Q      AA+      +PYV
Sbjct: 9   HGRISSTPAAASEPSKAAAHSSDYAPYPKLDPTDVTPPPPQPIPTGAAATTMPAESNPYV 68

Query: 74  QYSPVDHRPSSNPLEPVVHAFNSW-------SNKAETFARNIWHNLRTGQSMSEAAWGKV 133
             SP       N ++ V      W       + KAE  A N W +L+TG S+++AA  ++
Sbjct: 69  SPSPAPR----NTMDSVKDTLGKWGKMAADATKKAEDLAGNFWQHLKTGPSVADAAVSRI 128

Query: 134 NLTAKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLSTVRVAFCSDR 193
               K + EGG+E +FKQTF    +EKL+K++ACYLST+ GPV G +YLST ++AF SD 
Sbjct: 129 AQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLGVMYLSTHKLAFSSDN 188

Query: 194 PLYFTAPSGQPSWSYYKV 199
           PL +     Q  WSYYKV
Sbjct: 189 PLSY-KEGEQTLWSYYKV 201

[Close]

BLAST of CsGy4G002530 vs. Swiss-Prot
Match: sp|Q9M063|GEML3_ARATH (Putative GEM-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g40100 PE=3 SV=2)

HSP 1 Score: 91.7 bits (226), Expect = 1.1e-17
Identity = 61/167 (36.53%), Postives = 87/167 (52.10%), Query Frame = 0


Query: 26  ESKKWGTHVMGPPAAPTEHPDNQKAAFWNAASQQQIHHHPYVQYSPVDHRPSS--NPLEP 85
           E+  W   ++    AP E     KA   ++A++     +PYV  +P +   +S    +E 
Sbjct: 26  ENLHWNPELVSESPAPDE-----KALSSSSAARS----NPYVARAPTETSDASLKETMES 85

Query: 86  VVHAFNSWSN-------KAETFARNIW-HNLRTGQSMSEAAWGKVNLTAKAITEGGFESL 145
           V      W         KAE+ A N W H LR       AA G++  + K + EGG+E +
Sbjct: 86  VKGVLGRWGRRVGEAAMKAESLAGNTWQHPLR-------AAMGRIAQSTKVLAEGGYEKI 145

Query: 146 FKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLSTVRVAFCSDRPL 183
           F+QTF T   E+L  SFACYLST+ GPV G LY+ST ++A+CSD  L
Sbjct: 146 FRQTFETVPEEQLQNSFACYLSTSAGPVMGVLYVSTAKLAYCSDTSL 176

[Close]

BLAST of CsGy4G002530 vs. Swiss-Prot
Match: sp|Q9FMW4|GEML8_ARATH (Putative GEM-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=At5g23370 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 6.6e-15
Identity = 49/154 (31.82%), Postives = 83/154 (53.90%), Query Frame = 0


Query: 59  QQIHHHPYVQYSPVDHRP---SSNPLE-PVVHAFNSWSNKA---------ETFARNIWHN 118
           QQ+   P V+ SP  + P   S N L+ P    F+  + K          ++F   +   
Sbjct: 8   QQLITFPAVKTSPAGYLPDPASINKLQIPTSSKFSFLTGKGKSMLRKKKNDSFTNGVRDQ 67

Query: 119 LRTGQSMSEAAWGKVNLTAKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAG 178
            + G  ++E    K++L A+ +  GG E ++K+ F     EKL K++ CYLST  GP+AG
Sbjct: 68  DKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAYQCYLSTTAGPIAG 127

Query: 179 TLYLSTVRVAFCSDRPLYFTAPSGQPSWSYYKVN 200
            L++S+ ++AFCS+R +   +P G+ +  +YKV+
Sbjct: 128 LLFISSKKIAFCSERSIKVASPQGELNRVHYKVS 161

[Close]

BLAST of CsGy4G002530 vs. TrEMBL
Match: tr|A0A0A0KTT7|A0A0A0KTT7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G010990 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 1.1e-110
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MAGTSEDPKPTESHPSPAPPPSTEDESKKWGTHVMGPPAAPTEHPDNQKAAFWNAASQQQ 60
           MAGTSEDPKPTESHPSPAPPPSTEDESKKWGTHVMGPPAAPTEHPDNQKAAFWNAASQQQ
Sbjct: 1   MAGTSEDPKPTESHPSPAPPPSTEDESKKWGTHVMGPPAAPTEHPDNQKAAFWNAASQQQ 60

Query: 61  IHHHPYVQYSPVDHRPSSNPLEPVVHAFNSWSNKAETFARNIWHNLRTGQSMSEAAWGKV 120
           IHHHPYVQYSPVDHRPSSNPLEPVVHAFNSWSNKAETFARNIWHNLRTGQSMSEAAWGKV
Sbjct: 61  IHHHPYVQYSPVDHRPSSNPLEPVVHAFNSWSNKAETFARNIWHNLRTGQSMSEAAWGKV 120

Query: 121 NLTAKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLSTVRVAFCSDR 180
           NLTAKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLSTVRVAFCSDR
Sbjct: 121 NLTAKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLSTVRVAFCSDR 180

Query: 181 PLYFTAPSGQPSWSYYKV 199
           PLYFTAPSGQPSWSYYKV
Sbjct: 181 PLYFTAPSGQPSWSYYKV 198

[Close]

BLAST of CsGy4G002530 vs. TrEMBL
Match: tr|A0A1S3BXX6|A0A1S3BXX6_CUCME (GEM-like protein 5 OS=Cucumis melo OX=3656 GN=LOC103494606 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 1.9e-107
Identity = 192/198 (96.97%), Postives = 194/198 (97.98%), Query Frame = 0


Query: 1   MAGTSEDPKPTESHPSPAPPPSTEDESKKWGTHVMGPPAAPTEHPDNQKAAFWNAASQQQ 60
           MAGTS DPKPTESHPSPAPPPSTEDESKKWGTHVMGPPAAPTEHPDNQKAAFWNAA+QQQ
Sbjct: 1   MAGTSGDPKPTESHPSPAPPPSTEDESKKWGTHVMGPPAAPTEHPDNQKAAFWNAAAQQQ 60

Query: 61  IHHHPYVQYSPVDHRPSSNPLEPVVHAFNSWSNKAETFARNIWHNLRTGQSMSEAAWGKV 120
           IHHHPYVQYSPVDHRPSSNPLEPVVHAFNSWSNKAETFARNIWHNLRTG SMSEAAWGKV
Sbjct: 61  IHHHPYVQYSPVDHRPSSNPLEPVVHAFNSWSNKAETFARNIWHNLRTGPSMSEAAWGKV 120

Query: 121 NLTAKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLSTVRVAFCSDR 180
           NLTAKAITEGGFESLFKQTF TE NEKL+KSFACYLSTATGPVAGTLYLSTVRVAFCSDR
Sbjct: 121 NLTAKAITEGGFESLFKQTFVTEANEKLVKSFACYLSTATGPVAGTLYLSTVRVAFCSDR 180

Query: 181 PLYFTAPSGQPSWSYYKV 199
           PLYFTAPSGQPSWSYYKV
Sbjct: 181 PLYFTAPSGQPSWSYYKV 198

[Close]

BLAST of CsGy4G002530 vs. TrEMBL
Match: tr|D1MWZ0|D1MWZ0_CITLA (GRAM domain-containing protein OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=CitGRAM PE=2 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 8.4e-100
Identity = 179/198 (90.40%), Postives = 186/198 (93.94%), Query Frame = 0


Query: 1   MAGTSEDPKPTESHPSPAPPPSTEDESKKWGTHVMGPPAAPTEHPDNQKAAFWNAASQQQ 60
           MAGTSEDPKP ES  SP+PPPSTEDESKKWGTH+MG PAAP EHPDN KAAFWNAA+QQQ
Sbjct: 1   MAGTSEDPKPAESQASPSPPPSTEDESKKWGTHIMGAPAAPNEHPDNYKAAFWNAAAQQQ 60

Query: 61  IHHHPYVQYSPVDHRPSSNPLEPVVHAFNSWSNKAETFARNIWHNLRTGQSMSEAAWGKV 120
           I+HHPYVQYSPVDHRPS+NP EPVVHAFNSWSNKAE+ ARNIWHNLRTG SMS AAWGK+
Sbjct: 61  IYHHPYVQYSPVDHRPSTNPFEPVVHAFNSWSNKAESIARNIWHNLRTGPSMSGAAWGKL 120

Query: 121 NLTAKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLSTVRVAFCSDR 180
           NLTAKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLST RV FCSDR
Sbjct: 121 NLTAKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLSTARVGFCSDR 180

Query: 181 PLYFTAPSGQPSWSYYKV 199
           PLYFTAPSGQPSWSYYKV
Sbjct: 181 PLYFTAPSGQPSWSYYKV 198

[Close]

BLAST of CsGy4G002530 vs. TrEMBL
Match: tr|A0A2H5N9A6|A0A2H5N9A6_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_024710 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 5.3e-78
Identity = 142/179 (79.33%), Postives = 159/179 (88.83%), Query Frame = 0


Query: 20  PPSTEDESKKWGTHVMGPPAAPTEHPDNQKAAFWNAASQQQIHHHPYVQYSPVDHRPSSN 79
           PPS E+E KKWGTH+MG PA P+ HPDNQKAA WNA ++QQI+H  YV+YSP+D +PS+N
Sbjct: 16  PPSEEEERKKWGTHIMGAPAVPSAHPDNQKAASWNAENRQQIYHQSYVEYSPID-KPSNN 75

Query: 80  PLEPVVHAFNSWSNKAETFARNIWHNLRTGQSMSEAAWGKVNLTAKAITEGGFESLFKQT 139
           PLEPV+HAFN+WS KAET ARNIWHNL+TG S+SEAAWGKVNLTAKAITEGGFESLFKQ 
Sbjct: 76  PLEPVIHAFNTWSTKAETIARNIWHNLKTGPSVSEAAWGKVNLTAKAITEGGFESLFKQI 135

Query: 140 FATEVNEKLMKSFACYLSTATGPVAGTLYLSTVRVAFCSDRPLYFTAPSGQPSWSYYKV 199
           FAT+ NEKL K+FACYLST TGPVAGTLYLST RVAFCSDRPL FTAPSGQ +WSYYKV
Sbjct: 136 FATDPNEKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKV 193

[Close]

BLAST of CsGy4G002530 vs. TrEMBL
Match: tr|V4SVZ8|V4SVZ8_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10032479mg PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 5.3e-78
Identity = 142/179 (79.33%), Postives = 159/179 (88.83%), Query Frame = 0


Query: 20  PPSTEDESKKWGTHVMGPPAAPTEHPDNQKAAFWNAASQQQIHHHPYVQYSPVDHRPSSN 79
           PPS E+E KKWGTH+MG PA P+ HPDNQKAA WNA ++QQI+H  YV+YSP+D +PS+N
Sbjct: 16  PPSEEEERKKWGTHIMGAPAVPSAHPDNQKAASWNAENRQQIYHQSYVEYSPID-KPSNN 75

Query: 80  PLEPVVHAFNSWSNKAETFARNIWHNLRTGQSMSEAAWGKVNLTAKAITEGGFESLFKQT 139
           PLEPV+HAFN+WS KAET ARNIWHNL+TG S+SEAAWGKVNLTAKAITEGGFESLFKQ 
Sbjct: 76  PLEPVIHAFNTWSTKAETIARNIWHNLKTGPSVSEAAWGKVNLTAKAITEGGFESLFKQI 135

Query: 140 FATEVNEKLMKSFACYLSTATGPVAGTLYLSTVRVAFCSDRPLYFTAPSGQPSWSYYKV 199
           FAT+ NEKL K+FACYLST TGPVAGTLYLST RVAFCSDRPL FTAPSGQ +WSYYKV
Sbjct: 136 FATDPNEKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKV 193

The following BLAST results are available for this feature:

BLAST of CsGy4G002530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653028.1	1.6e-110	100.00	PREDICTED: GEM-like protein 5 [Cucumis sativus] >KGN53000.1 hypothetical protein...	[more]
XP_008454090.1	2.8e-107	96.97	PREDICTED: GEM-like protein 5 [Cucumis melo]	[more]
XP_022955795.1	5.7e-100	90.40	GEM-like protein 5 [Cucurbita moschata]	[more]
XP_023527116.1	7.5e-100	90.40	GEM-like protein 5 [Cucurbita pepo subsp. pepo]	[more]
BAI52950.1	1.3e-99	90.40	GRAM domain-containing protein [Citrullus lanatus subsp. vulgaris]	[more]

BLAST of CsGy4G002530 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13200.1	6.6e-74	69.95	GRAM domain family protein	[more]
AT2G22475.1	7.1e-28	36.41	GRAM domain family protein	[more]
AT1G28200.1	8.1e-24	36.87	FH interacting protein 1	[more]
AT5G23370.1	3.7e-16	31.82	GRAM domain-containing protein / ABA-responsive protein-related	[more]
AT5G23350.1	1.1e-15	36.79	GRAM domain-containing protein / ABA-responsive protein-related	[more]

BLAST of CsGy4G002530 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LYV6\|GEML5_ARATH	1.2e-72	69.95	GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1	[more]
sp\|Q8S8F8\|GEM_ARATH	1.3e-26	36.41	GLABRA2 expression modulator OS=Arabidopsis thaliana OX=3702 GN=GEM PE=1 SV=1	[more]
sp\|Q9SE96\|GEML1_ARATH	1.5e-22	36.87	GEM-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FIP1 PE=1 SV=1	[more]
sp\|Q9M063\|GEML3_ARATH	1.1e-17	36.53	Putative GEM-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g40100 PE=3 SV...	[more]
sp\|Q9FMW4\|GEML8_ARATH	6.6e-15	31.82	Putative GEM-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=At5g23370 PE=3 SV...	[more]

BLAST of CsGy4G002530 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KTT7\|A0A0A0KTT7_CUCSA	1.1e-110	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G010990 PE=4 SV=1	[more]
tr\|A0A1S3BXX6\|A0A1S3BXX6_CUCME	1.9e-107	96.97	GEM-like protein 5 OS=Cucumis melo OX=3656 GN=LOC103494606 PE=4 SV=1	[more]
tr\|D1MWZ0\|D1MWZ0_CITLA	8.4e-100	90.40	GRAM domain-containing protein OS=Citrullus lanatus subsp. vulgaris OX=260674 GN...	[more]
tr\|A0A2H5N9A6\|A0A2H5N9A6_CITUN	5.3e-78	79.33	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_024710 PE=4 SV=1	[more]
tr\|V4SVZ8\|V4SVZ8_9ROSI	5.3e-78	79.33	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10032479mg PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR037848	GEM-like
IPR004182	GRAM

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0098755	maintenance of seed dormancy by absisic acid
biological_process	GO:0010029	regulation of seed germination
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G002530.1	CsGy4G002530.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004182	GRAM domain	SMART	SM00568	gram2001c	coord: 134..201 e-value: 5.7E-8 score: 42.5
IPR004182	GRAM domain	PFAM	PF02893	GRAM	coord: 135..195 e-value: 1.3E-12 score: 47.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	PANTHER	PTHR31969:SF3	GEM-LIKE PROTEIN 5	coord: 6..198
IPR037848	GEM-like protein	PANTHER	PTHR31969	FAMILY NOT NAMED	coord: 6..198

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy4G002530	Cla010907	Watermelon (97103) v1	cgybwmB291
CsGy4G002530	Csa4G010990	Cucumber (Chinese Long) v2	cgybcuB165
CsGy4G002530	MELO3C017783	Melon (DHL92) v3.5.1	cgybmeB269
CsGy4G002530	ClCG07G015050	Watermelon (Charleston Gray)	cgybwcgB298
CsGy4G002530	CSPI04G02670	Wild cucumber (PI 183967)	cgybcpiB168
CsGy4G002530	CmaCh14G014240	Cucurbita maxima (Rimu)	cgybcmaB485
CsGy4G002530	CmoCh14G014600	Cucurbita moschata (Rifu)	cgybcmoB455
CsGy4G002530	Lsi07G003560	Bottle gourd (USVL1VR-Ls)	cgyblsiB285
CsGy4G002530	Cp4.1LG03g13070	Cucurbita pepo (Zucchini)	cgybcpeB552
CsGy4G002530	MELO3C017783.2	Melon (DHL92) v3.6.1	cgybmedB266
CsGy4G002530	CsaV3_4G002600	Cucumber (Chinese Long) v3	cgybcucB171
CsGy4G002530	Cla97C07G142010	Watermelon (97103) v2	cgybwmbB299
CsGy4G002530	Bhi01G002873	Wax gourd	cgybwgoB353
CsGy4G002530	Carg06575	Silver-seed gourd	carcgybB0127

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy4G002530	Wax gourd	cgybwgoB363
CsGy4G002530	Cucurbita maxima (Rimu)	cgybcmaB560
CsGy4G002530	Cucurbita moschata (Rifu)	cgybcmoB535
CsGy4G002530	Cucurbita pepo (Zucchini)	cgybcpeB575
CsGy4G002530	Silver-seed gourd	carcgybB0693