Cp4.1LG03g13070 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATCGATGAAAATTCAATTGTTCCAGATTTTTCCATTTTCGTTTTCACAACTCCGTCCACCGTCGACCGTCGCTTACCGCCGTCATTTTCCATTTGAAAAATCCTCCCCTCGAATTTTCCCTTTTTCTTTCTGTCGAAGGAATCATATACAATTCTTCTTCCAGAAACCGCGTCGCCTTTCTCCGATCCCAATCCCGATCCATCCCTATAAAACCCTCCCCCTCCACCATCATCTCTCAATCGAAAATCCACCATGGCCGGAGCATCTGAACATCCTAAACCCACCGAATCTCAGGCTTCCCCTGTTCCGCCGCCCTCCACGGAGGAGGAATCAAAGAAATGGGGGACACACGTTATGGGGCCGCCGGCGGCTCCCTCTGAGCATCCGGATAACCATAAGGCGGCGTTCTGGAACGCCGCGGACCAGCAGAAGATCCACCATCATCCGTACGTGCAATACTCGCCGGTGGATCATCGGCCGAGCACTAACCCGTTCGAGCCTGTGGTACACGCTTTCAATTCGTGGAGCAACAAAGCAGAGACTATGGCGCGCAACATCTGGCACAATCGTAAGTGGATTTGGTGATGGATTGAAATTAGCGCTGAAATTAGGGCTTTCGGTTTGTTTATTAAGGATTTTGGAATTTTAATTTTGCAGTGAGGACTGGACCGTCGATGTCCGAGGCGGCTTGGGGCAAATTGAACTTGACGGCGAAGGCTATAACGGAAGGCGGATTTGAGTCTCTGTTTAAGCAGACTTTCGCGACGGAGCCAAATGAGAAGCTGATGAAAAGCTTTGCTTGCTATCTCTCCACCGCGACGGGTCCGGTGGCCGGAACTCTGTATTTGTCGACGGCGCGTCTGGGTTTTTGCAGCGATCGCCCACTTTACTTCACCGCTCCCTCTGGTCAACCGTCTTGGAGCTACTACAAGGTAAACTCACTACTTCACACGATAGTCATATATATTGTTCACTTTGAACATAAGTTTCCATGTTCGCCTTCTTCAAAAGGCCTCATACTAGTGGAGATATAGTATTTACTTGTAAACTCATGATCATTTGCTAAATGAGAGAGCCGAGGTCGGGCTCACTCTCAACAATCTTCCCCTCGAATAAAGTAGACTATAGAACCCACCTCCCCGAGACCTATTAAGTCTTCGAACAGTCTCTCCTTAATCGAGGCTCGACTTCTTCTCTTGGAATTTTTAAATAAAGTACACTCTTTGTTTAATACTCGAGTAACTTTTTTACTACACCTTCCAGACTTACAACTTCTTTCACTAAGTTAAGGGCATGACTACGATACCATGTTAGGGATCACTCATCTTCGTAGTATGATATGTTTCACTTTGAACATAATTCTCCTGGCTCGGCCTTCTCGAAAGGCCTCATTGCTTATAAACCCATGATCGGGCTCCTAACAAATTCTTCTCTACAAAATTATGAACATAATATTGAATTTAGTTTGAATGAAAATTGATGTGGTTGGGATTGGGCAGGTAATGATACCGCTGTCGCATATACCAGCAGTGAACCCAGTGACGATGCCGGGAAACCCATCGGCGAGGTACCTCCAGATCACCACCGTGGACGGCCATGAGTTTTGGTTTATGGGTTTTGTGAATTTCGAGAAGGCAACGCACCACTTCTTGAACGCCGTCTTTCCATAATGCGCCGCCGTGTGCCGCCTGACCGGACATTCTTTTCACCATGCCGAGCATTTCATTATATAGATATATTTTCTTAAATTGTGGCTTTCTTGTTTTATATGTACTTTTTTGTAGCTTGCGAGTCTTTCACACTCCCATTGTACTATTGCTAGTATACAATAAATCATTTATTTTTGTGTATTATGGTTCGTAAGTTTGGTCTTGTGAGGAACGTGCTTTGTTGTGGAATCTCACAATCCACTCCCATTGGGAGTTAACGTTTGATGTGGGATCTCATGATCCACTTTCGTTGCCCGACAATGTTCTTGTAGTGTCGAACTCTAATAC CATCGATGAAAATTCAATTGTTCCAGATTTTTCCATTTTCGTTTTCACAACTCCGTCCACCGTCGACCGTCGCTTACCGCCGTCATTTTCCATTTGAAAAATCCTCCCCTCGAATTTTCCCTTTTTCTTTCTGTCGAAGGAATCATATACAATTCTTCTTCCAGAAACCGCGTCGCCTTTCTCCGATCCCAATCCCGATCCATCCCTATAAAACCCTCCCCCTCCACCATCATCTCTCAATCGAAAATCCACCATGGCCGGAGCATCTGAACATCCTAAACCCACCGAATCTCAGGCTTCCCCTGTTCCGCCGCCCTCCACGGAGGAGGAATCAAAGAAATGGGGGACACACGTTATGGGGCCGCCGGCGGCTCCCTCTGAGCATCCGGATAACCATAAGGCGGCGTTCTGGAACGCCGCGGACCAGCAGAAGATCCACCATCATCCGTACGTGCAATACTCGCCGGTGGATCATCGGCCGAGCACTAACCCGTTCGAGCCTGTGGTACACGCTTTCAATTCGTGGAGCAACAAAGCAGAGACTATGGCGCGCAACATCTGGCACAATCTGAGGACTGGACCGTCGATGTCCGAGGCGGCTTGGGGCAAATTGAACTTGACGGCGAAGGCTATAACGGAAGGCGGATTTGAGTCTCTGTTTAAGCAGACTTTCGCGACGGAGCCAAATGAGAAGCTGATGAAAAGCTTTGCTTGCTATCTCTCCACCGCGACGGGTCCGGTGGCCGGAACTCTGTATTTGTCGACGGCGCGTCTGGGTAATGATACCGCTGTCGCATATACCAGCAGTGAACCCAGTGACGATGCCGGGAAACCCATCGGCGAGGTACCTCCAGATCACCACCGTGGACGGCCATGAGTTTTGGTTTATGGGTTTTGTGAATTTCGAGAAGGCAACGCACCACTTCTTGAACGCCGTCTTTCCATAATGCGCCGCCGTGTGCCGCCTGACCGGACATTCTTTTCACCATGCCGAGCATTTCATTATATAGATATATTTTCTTAAATTGTGGCTTTCTTGTTTTATATGTACTTTTTTGTAGCTTGCGAGTCTTTCACACTCCCATTGTACTATTGCTAGTATACAATAAATCATTTATTTTTGTGTATTATGGTTCGTAAGTTTGGTCTTGTGAGGAACGTGCTTTGTTGTGGAATCTCACAATCCACTCCCATTGGGAGTTAACGTTTGATGTGGGATCTCATGATCCACTTTCGTTGCCCGACAATGTTCTTGTAGTGTCGAACTCTAATAC ATGGCCGGAGCATCTGAACATCCTAAACCCACCGAATCTCAGGCTTCCCCTGTTCCGCCGCCCTCCACGGAGGAGGAATCAAAGAAATGGGGGACACACGTTATGGGGCCGCCGGCGGCTCCCTCTGAGCATCCGGATAACCATAAGGCGGCGTTCTGGAACGCCGCGGACCAGCAGAAGATCCACCATCATCCGTACGTGCAATACTCGCCGGTGGATCATCGGCCGAGCACTAACCCGTTCGAGCCTGTGGTACACGCTTTCAATTCGTGGAGCAACAAAGCAGAGACTATGGCGCGCAACATCTGGCACAATCTGAGGACTGGACCGTCGATGTCCGAGGCGGCTTGGGGCAAATTGAACTTGACGGCGAAGGCTATAACGGAAGGCGGATTTGAGTCTCTGTTTAAGCAGACTTTCGCGACGGAGCCAAATGAGAAGCTGATGAAAAGCTTTGCTTGCTATCTCTCCACCGCGACGGGTCCGGTGGCCGGAACTCTGTATTTGTCGACGGCGCGTCTGGGTAATGATACCGCTGTCGCATATACCAGCAGTGAACCCAGTGACGATGCCGGGAAACCCATCGGCGAGGTACCTCCAGATCACCACCGTGGACGGCCATGA MAGASEHPKPTESQASPVPPPSTEEESKKWGTHVMGPPAAPSEHPDNHKAAFWNAADQQKIHHHPYVQYSPVDHRPSTNPFEPVVHAFNSWSNKAETMARNIWHNLRTGPSMSEAAWGKLNLTAKAITEGGFESLFKQTFATEPNEKLMKSFACYLSTATGPVAGTLYLSTARLGNDTAVAYTSSEPSDDAGKPIGEVPPDHHRGRP
BLAST of Cp4.1LG03g13070 vs. Swiss-Prot
Match: GEML5_ARATH (GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g13200 PE=1 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 4.2e-59 Identity = 115/182 (63.19%), Postives = 137/182 (75.27%), Query Frame = 1
BLAST of Cp4.1LG03g13070 vs. Swiss-Prot
Match: GEM_ARATH (GLABRA2 expression modulator OS=Arabidopsis thaliana GN=GEM PE=1 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 3.1e-22 Identity = 64/188 (34.04%), Postives = 100/188 (53.19%), Query Frame = 1
BLAST of Cp4.1LG03g13070 vs. Swiss-Prot
Match: GEML1_ARATH (GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1 PE=1 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 9.4e-19 Identity = 68/194 (35.05%), Postives = 94/194 (48.45%), Query Frame = 1
BLAST of Cp4.1LG03g13070 vs. Swiss-Prot
Match: GEML3_ARATH (Putative GEM-like protein 3 OS=Arabidopsis thaliana GN=At4g40100 PE=3 SV=2) HSP 1 Score: 81.3 bits (199), Expect = 1.4e-14 Identity = 61/189 (32.28%), Postives = 88/189 (46.56%), Query Frame = 1
BLAST of Cp4.1LG03g13070 vs. Swiss-Prot
Match: GEML2_ARATH (GEM-like protein 2 OS=Arabidopsis thaliana GN=At4g01600 PE=2 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.5e-11 Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = 1
BLAST of Cp4.1LG03g13070 vs. TrEMBL
Match: D1MWZ0_CITLA (GRAM domain-containing protein OS=Citrullus lanatus subsp. vulgaris GN=CitGRAM PE=2 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 2.8e-86 Identity = 163/192 (84.90%), Postives = 176/192 (91.67%), Query Frame = 1
BLAST of Cp4.1LG03g13070 vs. TrEMBL
Match: A0A0A0KTT7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G010990 PE=4 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 2.4e-85 Identity = 160/187 (85.56%), Postives = 166/187 (88.77%), Query Frame = 1
BLAST of Cp4.1LG03g13070 vs. TrEMBL
Match: V4SVZ8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032479mg PE=4 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 9.3e-66 Identity = 125/168 (74.40%), Postives = 142/168 (84.52%), Query Frame = 1
BLAST of Cp4.1LG03g13070 vs. TrEMBL
Match: A0A067GWU3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024728mg PE=4 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 3.6e-65 Identity = 128/181 (70.72%), Postives = 148/181 (81.77%), Query Frame = 1
BLAST of Cp4.1LG03g13070 vs. TrEMBL
Match: A0A067JUS9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23117 PE=4 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 9.7e-63 Identity = 121/167 (72.46%), Postives = 142/167 (85.03%), Query Frame = 1
BLAST of Cp4.1LG03g13070 vs. TAIR10
Match: AT5G13200.1 (AT5G13200.1 GRAM domain family protein) HSP 1 Score: 229.2 bits (583), Expect = 2.4e-60 Identity = 115/182 (63.19%), Postives = 137/182 (75.27%), Query Frame = 1
BLAST of Cp4.1LG03g13070 vs. TAIR10
Match: AT2G22475.1 (AT2G22475.1 GRAM domain family protein) HSP 1 Score: 106.7 bits (265), Expect = 1.8e-23 Identity = 64/188 (34.04%), Postives = 100/188 (53.19%), Query Frame = 1
BLAST of Cp4.1LG03g13070 vs. TAIR10
Match: AT1G28200.1 (AT1G28200.1 FH interacting protein 1) HSP 1 Score: 95.1 bits (235), Expect = 5.3e-20 Identity = 68/194 (35.05%), Postives = 94/194 (48.45%), Query Frame = 1
BLAST of Cp4.1LG03g13070 vs. TAIR10
Match: AT4G40100.1 (AT4G40100.1 GRAM domain family protein) HSP 1 Score: 75.9 bits (185), Expect = 3.3e-14 Identity = 52/156 (33.33%), Postives = 75/156 (48.08%), Query Frame = 1
BLAST of Cp4.1LG03g13070 vs. TAIR10
Match: AT4G01600.1 (AT4G01600.1 GRAM domain family protein) HSP 1 Score: 71.2 bits (173), Expect = 8.2e-13 Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = 1
BLAST of Cp4.1LG03g13070 vs. NCBI nr
Match: gi|270308994|dbj|BAI52950.1| (GRAM domain-containing protein [Citrullus lanatus subsp. vulgaris]) HSP 1 Score: 326.2 bits (835), Expect = 4.0e-86 Identity = 163/192 (84.90%), Postives = 176/192 (91.67%), Query Frame = 1
BLAST of Cp4.1LG03g13070 vs. NCBI nr
Match: gi|778689846|ref|XP_011653028.1| (PREDICTED: GEM-like protein 5 [Cucumis sativus]) HSP 1 Score: 323.2 bits (827), Expect = 3.4e-85 Identity = 160/187 (85.56%), Postives = 166/187 (88.77%), Query Frame = 1
BLAST of Cp4.1LG03g13070 vs. NCBI nr
Match: gi|659108238|ref|XP_008454090.1| (PREDICTED: GEM-like protein 5 [Cucumis melo]) HSP 1 Score: 320.1 bits (819), Expect = 2.9e-84 Identity = 158/187 (84.49%), Postives = 165/187 (88.24%), Query Frame = 1
BLAST of Cp4.1LG03g13070 vs. NCBI nr
Match: gi|567892633|ref|XP_006438837.1| (hypothetical protein CICLE_v10032479mg [Citrus clementina]) HSP 1 Score: 258.1 bits (658), Expect = 1.3e-65 Identity = 125/168 (74.40%), Postives = 142/168 (84.52%), Query Frame = 1
BLAST of Cp4.1LG03g13070 vs. NCBI nr
Match: gi|641864464|gb|KDO83150.1| (hypothetical protein CISIN_1g024728mg [Citrus sinensis]) HSP 1 Score: 256.1 bits (653), Expect = 5.1e-65 Identity = 128/181 (70.72%), Postives = 148/181 (81.77%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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