Cp4.1LG03g13070 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG03g13070
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionGRAM domain protein/ABA-responsive-like protein
LocationCp4.1LG03 : 9799414 .. 9801411 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATCGATGAAAATTCAATTGTTCCAGATTTTTCCATTTTCGTTTTCACAACTCCGTCCACCGTCGACCGTCGCTTACCGCCGTCATTTTCCATTTGAAAAATCCTCCCCTCGAATTTTCCCTTTTTCTTTCTGTCGAAGGAATCATATACAATTCTTCTTCCAGAAACCGCGTCGCCTTTCTCCGATCCCAATCCCGATCCATCCCTATAAAACCCTCCCCCTCCACCATCATCTCTCAATCGAAAATCCACCATGGCCGGAGCATCTGAACATCCTAAACCCACCGAATCTCAGGCTTCCCCTGTTCCGCCGCCCTCCACGGAGGAGGAATCAAAGAAATGGGGGACACACGTTATGGGGCCGCCGGCGGCTCCCTCTGAGCATCCGGATAACCATAAGGCGGCGTTCTGGAACGCCGCGGACCAGCAGAAGATCCACCATCATCCGTACGTGCAATACTCGCCGGTGGATCATCGGCCGAGCACTAACCCGTTCGAGCCTGTGGTACACGCTTTCAATTCGTGGAGCAACAAAGCAGAGACTATGGCGCGCAACATCTGGCACAATCGTAAGTGGATTTGGTGATGGATTGAAATTAGCGCTGAAATTAGGGCTTTCGGTTTGTTTATTAAGGATTTTGGAATTTTAATTTTGCAGTGAGGACTGGACCGTCGATGTCCGAGGCGGCTTGGGGCAAATTGAACTTGACGGCGAAGGCTATAACGGAAGGCGGATTTGAGTCTCTGTTTAAGCAGACTTTCGCGACGGAGCCAAATGAGAAGCTGATGAAAAGCTTTGCTTGCTATCTCTCCACCGCGACGGGTCCGGTGGCCGGAACTCTGTATTTGTCGACGGCGCGTCTGGGTTTTTGCAGCGATCGCCCACTTTACTTCACCGCTCCCTCTGGTCAACCGTCTTGGAGCTACTACAAGGTAAACTCACTACTTCACACGATAGTCATATATATTGTTCACTTTGAACATAAGTTTCCATGTTCGCCTTCTTCAAAAGGCCTCATACTAGTGGAGATATAGTATTTACTTGTAAACTCATGATCATTTGCTAAATGAGAGAGCCGAGGTCGGGCTCACTCTCAACAATCTTCCCCTCGAATAAAGTAGACTATAGAACCCACCTCCCCGAGACCTATTAAGTCTTCGAACAGTCTCTCCTTAATCGAGGCTCGACTTCTTCTCTTGGAATTTTTAAATAAAGTACACTCTTTGTTTAATACTCGAGTAACTTTTTTACTACACCTTCCAGACTTACAACTTCTTTCACTAAGTTAAGGGCATGACTACGATACCATGTTAGGGATCACTCATCTTCGTAGTATGATATGTTTCACTTTGAACATAATTCTCCTGGCTCGGCCTTCTCGAAAGGCCTCATTGCTTATAAACCCATGATCGGGCTCCTAACAAATTCTTCTCTACAAAATTATGAACATAATATTGAATTTAGTTTGAATGAAAATTGATGTGGTTGGGATTGGGCAGGTAATGATACCGCTGTCGCATATACCAGCAGTGAACCCAGTGACGATGCCGGGAAACCCATCGGCGAGGTACCTCCAGATCACCACCGTGGACGGCCATGAGTTTTGGTTTATGGGTTTTGTGAATTTCGAGAAGGCAACGCACCACTTCTTGAACGCCGTCTTTCCATAATGCGCCGCCGTGTGCCGCCTGACCGGACATTCTTTTCACCATGCCGAGCATTTCATTATATAGATATATTTTCTTAAATTGTGGCTTTCTTGTTTTATATGTACTTTTTTGTAGCTTGCGAGTCTTTCACACTCCCATTGTACTATTGCTAGTATACAATAAATCATTTATTTTTGTGTATTATGGTTCGTAAGTTTGGTCTTGTGAGGAACGTGCTTTGTTGTGGAATCTCACAATCCACTCCCATTGGGAGTTAACGTTTGATGTGGGATCTCATGATCCACTTTCGTTGCCCGACAATGTTCTTGTAGTGTCGAACTCTAATAC

mRNA sequence

CATCGATGAAAATTCAATTGTTCCAGATTTTTCCATTTTCGTTTTCACAACTCCGTCCACCGTCGACCGTCGCTTACCGCCGTCATTTTCCATTTGAAAAATCCTCCCCTCGAATTTTCCCTTTTTCTTTCTGTCGAAGGAATCATATACAATTCTTCTTCCAGAAACCGCGTCGCCTTTCTCCGATCCCAATCCCGATCCATCCCTATAAAACCCTCCCCCTCCACCATCATCTCTCAATCGAAAATCCACCATGGCCGGAGCATCTGAACATCCTAAACCCACCGAATCTCAGGCTTCCCCTGTTCCGCCGCCCTCCACGGAGGAGGAATCAAAGAAATGGGGGACACACGTTATGGGGCCGCCGGCGGCTCCCTCTGAGCATCCGGATAACCATAAGGCGGCGTTCTGGAACGCCGCGGACCAGCAGAAGATCCACCATCATCCGTACGTGCAATACTCGCCGGTGGATCATCGGCCGAGCACTAACCCGTTCGAGCCTGTGGTACACGCTTTCAATTCGTGGAGCAACAAAGCAGAGACTATGGCGCGCAACATCTGGCACAATCTGAGGACTGGACCGTCGATGTCCGAGGCGGCTTGGGGCAAATTGAACTTGACGGCGAAGGCTATAACGGAAGGCGGATTTGAGTCTCTGTTTAAGCAGACTTTCGCGACGGAGCCAAATGAGAAGCTGATGAAAAGCTTTGCTTGCTATCTCTCCACCGCGACGGGTCCGGTGGCCGGAACTCTGTATTTGTCGACGGCGCGTCTGGGTAATGATACCGCTGTCGCATATACCAGCAGTGAACCCAGTGACGATGCCGGGAAACCCATCGGCGAGGTACCTCCAGATCACCACCGTGGACGGCCATGAGTTTTGGTTTATGGGTTTTGTGAATTTCGAGAAGGCAACGCACCACTTCTTGAACGCCGTCTTTCCATAATGCGCCGCCGTGTGCCGCCTGACCGGACATTCTTTTCACCATGCCGAGCATTTCATTATATAGATATATTTTCTTAAATTGTGGCTTTCTTGTTTTATATGTACTTTTTTGTAGCTTGCGAGTCTTTCACACTCCCATTGTACTATTGCTAGTATACAATAAATCATTTATTTTTGTGTATTATGGTTCGTAAGTTTGGTCTTGTGAGGAACGTGCTTTGTTGTGGAATCTCACAATCCACTCCCATTGGGAGTTAACGTTTGATGTGGGATCTCATGATCCACTTTCGTTGCCCGACAATGTTCTTGTAGTGTCGAACTCTAATAC

Coding sequence (CDS)

ATGGCCGGAGCATCTGAACATCCTAAACCCACCGAATCTCAGGCTTCCCCTGTTCCGCCGCCCTCCACGGAGGAGGAATCAAAGAAATGGGGGACACACGTTATGGGGCCGCCGGCGGCTCCCTCTGAGCATCCGGATAACCATAAGGCGGCGTTCTGGAACGCCGCGGACCAGCAGAAGATCCACCATCATCCGTACGTGCAATACTCGCCGGTGGATCATCGGCCGAGCACTAACCCGTTCGAGCCTGTGGTACACGCTTTCAATTCGTGGAGCAACAAAGCAGAGACTATGGCGCGCAACATCTGGCACAATCTGAGGACTGGACCGTCGATGTCCGAGGCGGCTTGGGGCAAATTGAACTTGACGGCGAAGGCTATAACGGAAGGCGGATTTGAGTCTCTGTTTAAGCAGACTTTCGCGACGGAGCCAAATGAGAAGCTGATGAAAAGCTTTGCTTGCTATCTCTCCACCGCGACGGGTCCGGTGGCCGGAACTCTGTATTTGTCGACGGCGCGTCTGGGTAATGATACCGCTGTCGCATATACCAGCAGTGAACCCAGTGACGATGCCGGGAAACCCATCGGCGAGGTACCTCCAGATCACCACCGTGGACGGCCATGA

Protein sequence

MAGASEHPKPTESQASPVPPPSTEEESKKWGTHVMGPPAAPSEHPDNHKAAFWNAADQQKIHHHPYVQYSPVDHRPSTNPFEPVVHAFNSWSNKAETMARNIWHNLRTGPSMSEAAWGKLNLTAKAITEGGFESLFKQTFATEPNEKLMKSFACYLSTATGPVAGTLYLSTARLGNDTAVAYTSSEPSDDAGKPIGEVPPDHHRGRP
BLAST of Cp4.1LG03g13070 vs. Swiss-Prot
Match: GEML5_ARATH (GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g13200 PE=1 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.2e-59
Identity = 115/182 (63.19%), Postives = 137/182 (75.27%), Query Frame = 1

Query: 6   EHPKPTESQASPVPPPSTEEESKKWGTHVMGPPAAPSEHPDNHKAAFWNAADQQKIHHHP 65
           E PK  E++  P P  S+ ++ KKWGTHVMG PAAP  HPDN +AA W A D Q+  + P
Sbjct: 16  EQPKTLETEHQPEPSSSSPDQ-KKWGTHVMGAPAAPVAHPDNQQAAAWVAGDNQQTQYQP 75

Query: 66  YVQYSPVDHRPSTNPFEPVVHAFNSWSNKAETMARNIWHNLRTGPSMSEAAWGKLNLTAK 125
           YV YSPV+H  + NP EPV+  F++WS KAET+ARN+WHNL+TGPSMSE AWGK+NLTAK
Sbjct: 76  YVIYSPVEHPTTNNPLEPVIGMFHTWSRKAETVARNLWHNLKTGPSMSETAWGKVNLTAK 135

Query: 126 AITEGGFESLFKQTFATEPNEKLMKSFACYLSTATGPVAGTLYLSTARLGNDTAVAYTSS 185
           AIT+GGFESLF+Q F TEPNE L K+FACYLST TGPVAGT+YLS AR      VA+ S 
Sbjct: 136 AITKGGFESLFRQIFGTEPNETLKKTFACYLSTTTGPVAGTVYLSNAR------VAFCSD 190

Query: 186 EP 188
            P
Sbjct: 196 RP 190

BLAST of Cp4.1LG03g13070 vs. Swiss-Prot
Match: GEM_ARATH (GLABRA2 expression modulator OS=Arabidopsis thaliana GN=GEM PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.1e-22
Identity = 64/188 (34.04%), Postives = 100/188 (53.19%), Query Frame = 1

Query: 13  SQASPVPPPSTEEESKKWGTHVMGPPAAPSEHPDNHKAAFWNAADQQKIHHHPYVQYSPV 72
           S ++PV  PS      K   H      + S+ PD        AA       +PY+  SP 
Sbjct: 51  SDSTPVKAPSRTSSGSKKSVHWSPELVSGSQEPDQ------KAASSSSAGSNPYIARSPA 110

Query: 73  DHRPST--NPFEPVVHAFNSW-------SNKAETMARNIWHNLRTGPSMSEAAWGKLNLT 132
           +   ++  +  E V      W       + K E++A N W +LRT PS ++AA G++  +
Sbjct: 111 ETSDASLKDTMETVKGVLGRWGKRVAEAAKKTESLAGNTWQHLRTAPSFADAAMGRIAQS 170

Query: 133 AKAITEGGFESLFKQTFATEPNEKLMKSFACYLSTATGPVAGTLYLSTARLG--NDTAVA 190
            K   EGG+E +F+QTF T+P E+L+ SFACYLST+ GPV G LY+S+A+L   +D  ++
Sbjct: 171 TKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKLAYCSDNPLS 230

BLAST of Cp4.1LG03g13070 vs. Swiss-Prot
Match: GEML1_ARATH (GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 9.4e-19
Identity = 68/194 (35.05%), Postives = 94/194 (48.45%), Query Frame = 1

Query: 2   AGASEHPKPTESQASPVPPPSTEEESKKWGTHVMGPPAAPSEHPDNHKAAFWNAADQQKI 61
           A ASE  K     +   P P  +       T V  PP  P             AA     
Sbjct: 17  AAASEPSKAAAHSSDYAPYPKLDP------TDVTPPPPQP--------IPTGAAATTMPA 76

Query: 62  HHHPYVQYSPVDHRPSTNPFEPVVHAFNSW-------SNKAETMARNIWHNLRTGPSMSE 121
             +PYV  SP       N  + V      W       + KAE +A N W +L+TGPS+++
Sbjct: 77  ESNPYVSPSPAPR----NTMDSVKDTLGKWGKMAADATKKAEDLAGNFWQHLKTGPSVAD 136

Query: 122 AAWGKLNLTAKAITEGGFESLFKQTFATEPNEKLMKSFACYLSTATGPVAGTLYLSTARL 181
           AA  ++    K + EGG+E +FKQTF   P+EKL+K++ACYLST+ GPV G +YLST +L
Sbjct: 137 AAVSRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLGVMYLSTHKL 192

Query: 182 --GNDTAVAYTSSE 187
              +D  ++Y   E
Sbjct: 197 AFSSDNPLSYKEGE 192

BLAST of Cp4.1LG03g13070 vs. Swiss-Prot
Match: GEML3_ARATH (Putative GEM-like protein 3 OS=Arabidopsis thaliana GN=At4g40100 PE=3 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 1.4e-14
Identity = 61/189 (32.28%), Postives = 88/189 (46.56%), Query Frame = 1

Query: 24  EEESKKWGTHVMGPPAAPSEHPDNHKAAFWNAADQQKIHHHPYVQYSPVDHRPST--NPF 83
           + E+  W   ++    AP E   +  +A            +PYV  +P +   ++     
Sbjct: 24  DRENLHWNPELVSESPAPDEKALSSSSA---------ARSNPYVARAPTETSDASLKETM 83

Query: 84  EPVVHAFNSWSN-------KAETMARNIW-HNLRTGPSMSEAAWGKLNLTAKAITEGGFE 143
           E V      W         KAE++A N W H LR       AA G++  + K + EGG+E
Sbjct: 84  ESVKGVLGRWGRRVGEAAMKAESLAGNTWQHPLR-------AAMGRIAQSTKVLAEGGYE 143

Query: 144 SLFKQTFATEPNEKLMKSFACYLSTATGPVAGTLYLSTARLG--NDTAVAYTSSEPSDDA 201
            +F+QTF T P E+L  SFACYLST+ GPV G LY+STA+L   +DT++           
Sbjct: 144 KIFRQTFETVPEEQLQNSFACYLSTSAGPVMGVLYVSTAKLAYCSDTSLVVIPLHQLKSV 196

BLAST of Cp4.1LG03g13070 vs. Swiss-Prot
Match: GEML2_ARATH (GEM-like protein 2 OS=Arabidopsis thaliana GN=At4g01600 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.5e-11
Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = 1

Query: 92  SNKAETMARNIWHNLRTGPSMSEAAWGKLNLTAKAITEGGFESLFKQTFATEPNEKLMKS 151
           + KAE +   +  +L+  PS+S+AA  +L+   K I EGG E +F++ F     EKL+ S
Sbjct: 64  TRKAEALVGGLKDHLKFSPSISDAAMARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDS 123

Query: 152 FACYLSTATGPVAGTLYLSTARLG--NDTAVAYTSS 186
           F CY+ST +GPV G +Y+S  R+   +D A+   SS
Sbjct: 124 FVCYISTTSGPVTGVIYISNRRIAFCSDYAIRLPSS 159

BLAST of Cp4.1LG03g13070 vs. TrEMBL
Match: D1MWZ0_CITLA (GRAM domain-containing protein OS=Citrullus lanatus subsp. vulgaris GN=CitGRAM PE=2 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 2.8e-86
Identity = 163/192 (84.90%), Postives = 176/192 (91.67%), Query Frame = 1

Query: 1   MAGASEHPKPTESQASPVPPPSTEEESKKWGTHVMGPPAAPSEHPDNHKAAFWNAADQQK 60
           MAG SE PKP ESQASP PPPSTE+ESKKWGTH+MG PAAP+EHPDN+KAAFWNAA QQ+
Sbjct: 1   MAGTSEDPKPAESQASPSPPPSTEDESKKWGTHIMGAPAAPNEHPDNYKAAFWNAAAQQQ 60

Query: 61  IHHHPYVQYSPVDHRPSTNPFEPVVHAFNSWSNKAETMARNIWHNLRTGPSMSEAAWGKL 120
           I+HHPYVQYSPVDHRPSTNPFEPVVHAFNSWSNKAE++ARNIWHNLRTGPSMS AAWGKL
Sbjct: 61  IYHHPYVQYSPVDHRPSTNPFEPVVHAFNSWSNKAESIARNIWHNLRTGPSMSGAAWGKL 120

Query: 121 NLTAKAITEGGFESLFKQTFATEPNEKLMKSFACYLSTATGPVAGTLYLSTARLG--NDT 180
           NLTAKAITEGGFESLFKQTFATE NEKLMKSFACYLSTATGPVAGTLYLSTAR+G  +D 
Sbjct: 121 NLTAKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLSTARVGFCSDR 180

Query: 181 AVAYT--SSEPS 189
            + +T  S +PS
Sbjct: 181 PLYFTAPSGQPS 192

BLAST of Cp4.1LG03g13070 vs. TrEMBL
Match: A0A0A0KTT7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G010990 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.4e-85
Identity = 160/187 (85.56%), Postives = 166/187 (88.77%), Query Frame = 1

Query: 1   MAGASEHPKPTESQASPVPPPSTEEESKKWGTHVMGPPAAPSEHPDNHKAAFWNAADQQK 60
           MAG SE PKPTES  SP PPPSTE+ESKKWGTHVMGPPAAP+EHPDN KAAFWNAA QQ+
Sbjct: 1   MAGTSEDPKPTESHPSPAPPPSTEDESKKWGTHVMGPPAAPTEHPDNQKAAFWNAASQQQ 60

Query: 61  IHHHPYVQYSPVDHRPSTNPFEPVVHAFNSWSNKAETMARNIWHNLRTGPSMSEAAWGKL 120
           IHHHPYVQYSPVDHRPS+NP EPVVHAFNSWSNKAET ARNIWHNLRTG SMSEAAWGK+
Sbjct: 61  IHHHPYVQYSPVDHRPSSNPLEPVVHAFNSWSNKAETFARNIWHNLRTGQSMSEAAWGKV 120

Query: 121 NLTAKAITEGGFESLFKQTFATEPNEKLMKSFACYLSTATGPVAGTLYLSTARLGNDTAV 180
           NLTAKAITEGGFESLFKQTFATE NEKLMKSFACYLSTATGPVAGTLYLST R      V
Sbjct: 121 NLTAKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLSTVR------V 180

Query: 181 AYTSSEP 188
           A+ S  P
Sbjct: 181 AFCSDRP 181

BLAST of Cp4.1LG03g13070 vs. TrEMBL
Match: V4SVZ8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032479mg PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 9.3e-66
Identity = 125/168 (74.40%), Postives = 142/168 (84.52%), Query Frame = 1

Query: 20  PPSTEEESKKWGTHVMGPPAAPSEHPDNHKAAFWNAADQQKIHHHPYVQYSPVDHRPSTN 79
           PPS EEE KKWGTH+MG PA PS HPDN KAA WNA ++Q+I+H  YV+YSP+D +PS N
Sbjct: 16  PPSEEEERKKWGTHIMGAPAVPSAHPDNQKAASWNAENRQQIYHQSYVEYSPID-KPSNN 75

Query: 80  PFEPVVHAFNSWSNKAETMARNIWHNLRTGPSMSEAAWGKLNLTAKAITEGGFESLFKQT 139
           P EPV+HAFN+WS KAET+ARNIWHNL+TGPS+SEAAWGK+NLTAKAITEGGFESLFKQ 
Sbjct: 76  PLEPVIHAFNTWSTKAETIARNIWHNLKTGPSVSEAAWGKVNLTAKAITEGGFESLFKQI 135

Query: 140 FATEPNEKLMKSFACYLSTATGPVAGTLYLSTARLGNDTAVAYTSSEP 188
           FAT+PNEKL K+FACYLST TGPVAGTLYLSTAR      VA+ S  P
Sbjct: 136 FATDPNEKLKKTFACYLSTTTGPVAGTLYLSTAR------VAFCSDRP 176

BLAST of Cp4.1LG03g13070 vs. TrEMBL
Match: A0A067GWU3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024728mg PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 3.6e-65
Identity = 128/181 (70.72%), Postives = 148/181 (81.77%), Query Frame = 1

Query: 8   PKPTESQASPVPP-PSTEEESKKWGTHVMGPPAAPSEHPDNHKAAFWNAADQQKIHHHPY 67
           P P E  +S +   P +EEE KKWGTH+MG PA PS HPDN KAA WNA ++Q+I+H PY
Sbjct: 5   PDPEEKLSSTLTEAPPSEEERKKWGTHIMGAPAVPSAHPDNQKAASWNAENRQQIYHQPY 64

Query: 68  VQYSPVDHRPSTNPFEPVVHAFNSWSNKAETMARNIWHNLRTGPSMSEAAWGKLNLTAKA 127
           V+YSP+D +PS NP EPV+HAFN+WS KAET+ARNIWHNL+TGPS+SEAAWGK+NLTAKA
Sbjct: 65  VEYSPID-KPSNNPLEPVIHAFNNWSTKAETIARNIWHNLKTGPSVSEAAWGKVNLTAKA 124

Query: 128 ITEGGFESLFKQTFATEPNEKLMKSFACYLSTATGPVAGTLYLSTARLGNDTAVAYTSSE 187
           ITEGGFESLFKQ FAT+PNEKL K+FACYLST TGPVAGTLYLSTAR      VA+ S  
Sbjct: 125 ITEGGFESLFKQIFATDPNEKLKKTFACYLSTTTGPVAGTLYLSTAR------VAFCSDR 178

BLAST of Cp4.1LG03g13070 vs. TrEMBL
Match: A0A067JUS9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23117 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 9.7e-63
Identity = 121/167 (72.46%), Postives = 142/167 (85.03%), Query Frame = 1

Query: 11  TESQASPVPPPST--EEESKKWGTHVMGPPAAPSEHPDNHKAAFWNAADQQKIHHHPYVQ 70
           T+SQ + V    T  EEE+KKWGTH+MG PAAP+ HPDN KAA W A D Q+I+  PY+ 
Sbjct: 4   TQSQDTKVESQQTVSEEETKKWGTHIMGSPAAPTVHPDNQKAASWTAGDHQQIYQQPYLV 63

Query: 71  YSPVDHRPSTNPFEPVVHAFNSWSNKAETMARNIWHNLRTGPSMSEAAWGKLNLTAKAIT 130
           YSP D +PS NPFEPV+HAFN+WS KAET+ARNIWHNL+T PS+SEAAWGK+NLTAKAIT
Sbjct: 64  YSPTD-KPSNNPFEPVIHAFNTWSAKAETIARNIWHNLKTAPSVSEAAWGKVNLTAKAIT 123

Query: 131 EGGFESLFKQTFATEPNEKLMKSFACYLSTATGPVAGTLYLSTARLG 176
           EGGFESLFKQ F T+PNEKL+K+FACYLST+TGPVAGT+YLSTAR+G
Sbjct: 124 EGGFESLFKQIFETDPNEKLIKTFACYLSTSTGPVAGTIYLSTARVG 169

BLAST of Cp4.1LG03g13070 vs. TAIR10
Match: AT5G13200.1 (AT5G13200.1 GRAM domain family protein)

HSP 1 Score: 229.2 bits (583), Expect = 2.4e-60
Identity = 115/182 (63.19%), Postives = 137/182 (75.27%), Query Frame = 1

Query: 6   EHPKPTESQASPVPPPSTEEESKKWGTHVMGPPAAPSEHPDNHKAAFWNAADQQKIHHHP 65
           E PK  E++  P P  S+ ++ KKWGTHVMG PAAP  HPDN +AA W A D Q+  + P
Sbjct: 16  EQPKTLETEHQPEPSSSSPDQ-KKWGTHVMGAPAAPVAHPDNQQAAAWVAGDNQQTQYQP 75

Query: 66  YVQYSPVDHRPSTNPFEPVVHAFNSWSNKAETMARNIWHNLRTGPSMSEAAWGKLNLTAK 125
           YV YSPV+H  + NP EPV+  F++WS KAET+ARN+WHNL+TGPSMSE AWGK+NLTAK
Sbjct: 76  YVIYSPVEHPTTNNPLEPVIGMFHTWSRKAETVARNLWHNLKTGPSMSETAWGKVNLTAK 135

Query: 126 AITEGGFESLFKQTFATEPNEKLMKSFACYLSTATGPVAGTLYLSTARLGNDTAVAYTSS 185
           AIT+GGFESLF+Q F TEPNE L K+FACYLST TGPVAGT+YLS AR      VA+ S 
Sbjct: 136 AITKGGFESLFRQIFGTEPNETLKKTFACYLSTTTGPVAGTVYLSNAR------VAFCSD 190

Query: 186 EP 188
            P
Sbjct: 196 RP 190

BLAST of Cp4.1LG03g13070 vs. TAIR10
Match: AT2G22475.1 (AT2G22475.1 GRAM domain family protein)

HSP 1 Score: 106.7 bits (265), Expect = 1.8e-23
Identity = 64/188 (34.04%), Postives = 100/188 (53.19%), Query Frame = 1

Query: 13  SQASPVPPPSTEEESKKWGTHVMGPPAAPSEHPDNHKAAFWNAADQQKIHHHPYVQYSPV 72
           S ++PV  PS      K   H      + S+ PD        AA       +PY+  SP 
Sbjct: 51  SDSTPVKAPSRTSSGSKKSVHWSPELVSGSQEPDQ------KAASSSSAGSNPYIARSPA 110

Query: 73  DHRPST--NPFEPVVHAFNSW-------SNKAETMARNIWHNLRTGPSMSEAAWGKLNLT 132
           +   ++  +  E V      W       + K E++A N W +LRT PS ++AA G++  +
Sbjct: 111 ETSDASLKDTMETVKGVLGRWGKRVAEAAKKTESLAGNTWQHLRTAPSFADAAMGRIAQS 170

Query: 133 AKAITEGGFESLFKQTFATEPNEKLMKSFACYLSTATGPVAGTLYLSTARLG--NDTAVA 190
            K   EGG+E +F+QTF T+P E+L+ SFACYLST+ GPV G LY+S+A+L   +D  ++
Sbjct: 171 TKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKLAYCSDNPLS 230

BLAST of Cp4.1LG03g13070 vs. TAIR10
Match: AT1G28200.1 (AT1G28200.1 FH interacting protein 1)

HSP 1 Score: 95.1 bits (235), Expect = 5.3e-20
Identity = 68/194 (35.05%), Postives = 94/194 (48.45%), Query Frame = 1

Query: 2   AGASEHPKPTESQASPVPPPSTEEESKKWGTHVMGPPAAPSEHPDNHKAAFWNAADQQKI 61
           A ASE  K     +   P P  +       T V  PP  P             AA     
Sbjct: 17  AAASEPSKAAAHSSDYAPYPKLDP------TDVTPPPPQP--------IPTGAAATTMPA 76

Query: 62  HHHPYVQYSPVDHRPSTNPFEPVVHAFNSW-------SNKAETMARNIWHNLRTGPSMSE 121
             +PYV  SP       N  + V      W       + KAE +A N W +L+TGPS+++
Sbjct: 77  ESNPYVSPSPAPR----NTMDSVKDTLGKWGKMAADATKKAEDLAGNFWQHLKTGPSVAD 136

Query: 122 AAWGKLNLTAKAITEGGFESLFKQTFATEPNEKLMKSFACYLSTATGPVAGTLYLSTARL 181
           AA  ++    K + EGG+E +FKQTF   P+EKL+K++ACYLST+ GPV G +YLST +L
Sbjct: 137 AAVSRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLGVMYLSTHKL 192

Query: 182 --GNDTAVAYTSSE 187
              +D  ++Y   E
Sbjct: 197 AFSSDNPLSYKEGE 192

BLAST of Cp4.1LG03g13070 vs. TAIR10
Match: AT4G40100.1 (AT4G40100.1 GRAM domain family protein)

HSP 1 Score: 75.9 bits (185), Expect = 3.3e-14
Identity = 52/156 (33.33%), Postives = 75/156 (48.08%), Query Frame = 1

Query: 24  EEESKKWGTHVMGPPAAPSEHPDNHKAAFWNAADQQKIHHHPYVQYSPVDHRPST--NPF 83
           + E+  W   ++    AP E   +  +A            +PYV  +P +   ++     
Sbjct: 24  DRENLHWNPELVSESPAPDEKALSSSSA---------ARSNPYVARAPTETSDASLKETM 83

Query: 84  EPVVHAFNSWSN-------KAETMARNIW-HNLRTGPSMSEAAWGKLNLTAKAITEGGFE 143
           E V      W         KAE++A N W H LR       AA G++  + K + EGG+E
Sbjct: 84  ESVKGVLGRWGRRVGEAAMKAESLAGNTWQHPLR-------AAMGRIAQSTKVLAEGGYE 143

Query: 144 SLFKQTFATEPNEKLMKSFACYLSTATGPVAGTLYL 170
            +F+QTF T P E+L  SFACYLST+ GPV G LY+
Sbjct: 144 KIFRQTFETVPEEQLQNSFACYLSTSAGPVMGVLYV 163

BLAST of Cp4.1LG03g13070 vs. TAIR10
Match: AT4G01600.1 (AT4G01600.1 GRAM domain family protein)

HSP 1 Score: 71.2 bits (173), Expect = 8.2e-13
Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = 1

Query: 92  SNKAETMARNIWHNLRTGPSMSEAAWGKLNLTAKAITEGGFESLFKQTFATEPNEKLMKS 151
           + KAE +   +  +L+  PS+S+AA  +L+   K I EGG E +F++ F     EKL+ S
Sbjct: 64  TRKAEALVGGLKDHLKFSPSISDAAMARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDS 123

Query: 152 FACYLSTATGPVAGTLYLSTARLG--NDTAVAYTSS 186
           F CY+ST +GPV G +Y+S  R+   +D A+   SS
Sbjct: 124 FVCYISTTSGPVTGVIYISNRRIAFCSDYAIRLPSS 159

BLAST of Cp4.1LG03g13070 vs. NCBI nr
Match: gi|270308994|dbj|BAI52950.1| (GRAM domain-containing protein [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 326.2 bits (835), Expect = 4.0e-86
Identity = 163/192 (84.90%), Postives = 176/192 (91.67%), Query Frame = 1

Query: 1   MAGASEHPKPTESQASPVPPPSTEEESKKWGTHVMGPPAAPSEHPDNHKAAFWNAADQQK 60
           MAG SE PKP ESQASP PPPSTE+ESKKWGTH+MG PAAP+EHPDN+KAAFWNAA QQ+
Sbjct: 1   MAGTSEDPKPAESQASPSPPPSTEDESKKWGTHIMGAPAAPNEHPDNYKAAFWNAAAQQQ 60

Query: 61  IHHHPYVQYSPVDHRPSTNPFEPVVHAFNSWSNKAETMARNIWHNLRTGPSMSEAAWGKL 120
           I+HHPYVQYSPVDHRPSTNPFEPVVHAFNSWSNKAE++ARNIWHNLRTGPSMS AAWGKL
Sbjct: 61  IYHHPYVQYSPVDHRPSTNPFEPVVHAFNSWSNKAESIARNIWHNLRTGPSMSGAAWGKL 120

Query: 121 NLTAKAITEGGFESLFKQTFATEPNEKLMKSFACYLSTATGPVAGTLYLSTARLG--NDT 180
           NLTAKAITEGGFESLFKQTFATE NEKLMKSFACYLSTATGPVAGTLYLSTAR+G  +D 
Sbjct: 121 NLTAKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLSTARVGFCSDR 180

Query: 181 AVAYT--SSEPS 189
            + +T  S +PS
Sbjct: 181 PLYFTAPSGQPS 192

BLAST of Cp4.1LG03g13070 vs. NCBI nr
Match: gi|778689846|ref|XP_011653028.1| (PREDICTED: GEM-like protein 5 [Cucumis sativus])

HSP 1 Score: 323.2 bits (827), Expect = 3.4e-85
Identity = 160/187 (85.56%), Postives = 166/187 (88.77%), Query Frame = 1

Query: 1   MAGASEHPKPTESQASPVPPPSTEEESKKWGTHVMGPPAAPSEHPDNHKAAFWNAADQQK 60
           MAG SE PKPTES  SP PPPSTE+ESKKWGTHVMGPPAAP+EHPDN KAAFWNAA QQ+
Sbjct: 1   MAGTSEDPKPTESHPSPAPPPSTEDESKKWGTHVMGPPAAPTEHPDNQKAAFWNAASQQQ 60

Query: 61  IHHHPYVQYSPVDHRPSTNPFEPVVHAFNSWSNKAETMARNIWHNLRTGPSMSEAAWGKL 120
           IHHHPYVQYSPVDHRPS+NP EPVVHAFNSWSNKAET ARNIWHNLRTG SMSEAAWGK+
Sbjct: 61  IHHHPYVQYSPVDHRPSSNPLEPVVHAFNSWSNKAETFARNIWHNLRTGQSMSEAAWGKV 120

Query: 121 NLTAKAITEGGFESLFKQTFATEPNEKLMKSFACYLSTATGPVAGTLYLSTARLGNDTAV 180
           NLTAKAITEGGFESLFKQTFATE NEKLMKSFACYLSTATGPVAGTLYLST R      V
Sbjct: 121 NLTAKAITEGGFESLFKQTFATEVNEKLMKSFACYLSTATGPVAGTLYLSTVR------V 180

Query: 181 AYTSSEP 188
           A+ S  P
Sbjct: 181 AFCSDRP 181

BLAST of Cp4.1LG03g13070 vs. NCBI nr
Match: gi|659108238|ref|XP_008454090.1| (PREDICTED: GEM-like protein 5 [Cucumis melo])

HSP 1 Score: 320.1 bits (819), Expect = 2.9e-84
Identity = 158/187 (84.49%), Postives = 165/187 (88.24%), Query Frame = 1

Query: 1   MAGASEHPKPTESQASPVPPPSTEEESKKWGTHVMGPPAAPSEHPDNHKAAFWNAADQQK 60
           MAG S  PKPTES  SP PPPSTE+ESKKWGTHVMGPPAAP+EHPDN KAAFWNAA QQ+
Sbjct: 1   MAGTSGDPKPTESHPSPAPPPSTEDESKKWGTHVMGPPAAPTEHPDNQKAAFWNAAAQQQ 60

Query: 61  IHHHPYVQYSPVDHRPSTNPFEPVVHAFNSWSNKAETMARNIWHNLRTGPSMSEAAWGKL 120
           IHHHPYVQYSPVDHRPS+NP EPVVHAFNSWSNKAET ARNIWHNLRTGPSMSEAAWGK+
Sbjct: 61  IHHHPYVQYSPVDHRPSSNPLEPVVHAFNSWSNKAETFARNIWHNLRTGPSMSEAAWGKV 120

Query: 121 NLTAKAITEGGFESLFKQTFATEPNEKLMKSFACYLSTATGPVAGTLYLSTARLGNDTAV 180
           NLTAKAITEGGFESLFKQTF TE NEKL+KSFACYLSTATGPVAGTLYLST R      V
Sbjct: 121 NLTAKAITEGGFESLFKQTFVTEANEKLVKSFACYLSTATGPVAGTLYLSTVR------V 180

Query: 181 AYTSSEP 188
           A+ S  P
Sbjct: 181 AFCSDRP 181

BLAST of Cp4.1LG03g13070 vs. NCBI nr
Match: gi|567892633|ref|XP_006438837.1| (hypothetical protein CICLE_v10032479mg [Citrus clementina])

HSP 1 Score: 258.1 bits (658), Expect = 1.3e-65
Identity = 125/168 (74.40%), Postives = 142/168 (84.52%), Query Frame = 1

Query: 20  PPSTEEESKKWGTHVMGPPAAPSEHPDNHKAAFWNAADQQKIHHHPYVQYSPVDHRPSTN 79
           PPS EEE KKWGTH+MG PA PS HPDN KAA WNA ++Q+I+H  YV+YSP+D +PS N
Sbjct: 16  PPSEEEERKKWGTHIMGAPAVPSAHPDNQKAASWNAENRQQIYHQSYVEYSPID-KPSNN 75

Query: 80  PFEPVVHAFNSWSNKAETMARNIWHNLRTGPSMSEAAWGKLNLTAKAITEGGFESLFKQT 139
           P EPV+HAFN+WS KAET+ARNIWHNL+TGPS+SEAAWGK+NLTAKAITEGGFESLFKQ 
Sbjct: 76  PLEPVIHAFNTWSTKAETIARNIWHNLKTGPSVSEAAWGKVNLTAKAITEGGFESLFKQI 135

Query: 140 FATEPNEKLMKSFACYLSTATGPVAGTLYLSTARLGNDTAVAYTSSEP 188
           FAT+PNEKL K+FACYLST TGPVAGTLYLSTAR      VA+ S  P
Sbjct: 136 FATDPNEKLKKTFACYLSTTTGPVAGTLYLSTAR------VAFCSDRP 176

BLAST of Cp4.1LG03g13070 vs. NCBI nr
Match: gi|641864464|gb|KDO83150.1| (hypothetical protein CISIN_1g024728mg [Citrus sinensis])

HSP 1 Score: 256.1 bits (653), Expect = 5.1e-65
Identity = 128/181 (70.72%), Postives = 148/181 (81.77%), Query Frame = 1

Query: 8   PKPTESQASPVPP-PSTEEESKKWGTHVMGPPAAPSEHPDNHKAAFWNAADQQKIHHHPY 67
           P P E  +S +   P +EEE KKWGTH+MG PA PS HPDN KAA WNA ++Q+I+H PY
Sbjct: 5   PDPEEKLSSTLTEAPPSEEERKKWGTHIMGAPAVPSAHPDNQKAASWNAENRQQIYHQPY 64

Query: 68  VQYSPVDHRPSTNPFEPVVHAFNSWSNKAETMARNIWHNLRTGPSMSEAAWGKLNLTAKA 127
           V+YSP+D +PS NP EPV+HAFN+WS KAET+ARNIWHNL+TGPS+SEAAWGK+NLTAKA
Sbjct: 65  VEYSPID-KPSNNPLEPVIHAFNNWSTKAETIARNIWHNLKTGPSVSEAAWGKVNLTAKA 124

Query: 128 ITEGGFESLFKQTFATEPNEKLMKSFACYLSTATGPVAGTLYLSTARLGNDTAVAYTSSE 187
           ITEGGFESLFKQ FAT+PNEKL K+FACYLST TGPVAGTLYLSTAR      VA+ S  
Sbjct: 125 ITEGGFESLFKQIFATDPNEKLKKTFACYLSTTTGPVAGTLYLSTAR------VAFCSDR 178

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
GEML5_ARATH4.2e-5963.19GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g13200 PE=1 SV=1[more]
GEM_ARATH3.1e-2234.04GLABRA2 expression modulator OS=Arabidopsis thaliana GN=GEM PE=1 SV=1[more]
GEML1_ARATH9.4e-1935.05GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1 PE=1 SV=1[more]
GEML3_ARATH1.4e-1432.28Putative GEM-like protein 3 OS=Arabidopsis thaliana GN=At4g40100 PE=3 SV=2[more]
GEML2_ARATH1.5e-1139.58GEM-like protein 2 OS=Arabidopsis thaliana GN=At4g01600 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
D1MWZ0_CITLA2.8e-8684.90GRAM domain-containing protein OS=Citrullus lanatus subsp. vulgaris GN=CitGRAM P... [more]
A0A0A0KTT7_CUCSA2.4e-8585.56Uncharacterized protein OS=Cucumis sativus GN=Csa_4G010990 PE=4 SV=1[more]
V4SVZ8_9ROSI9.3e-6674.40Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032479mg PE=4 SV=1[more]
A0A067GWU3_CITSI3.6e-6570.72Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024728mg PE=4 SV=1[more]
A0A067JUS9_JATCU9.7e-6372.46Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23117 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G13200.12.4e-6063.19 GRAM domain family protein[more]
AT2G22475.11.8e-2334.04 GRAM domain family protein[more]
AT1G28200.15.3e-2035.05 FH interacting protein 1[more]
AT4G40100.13.3e-1433.33 GRAM domain family protein[more]
AT4G01600.18.2e-1339.58 GRAM domain family protein[more]
Match NameE-valueIdentityDescription
gi|270308994|dbj|BAI52950.1|4.0e-8684.90GRAM domain-containing protein [Citrullus lanatus subsp. vulgaris][more]
gi|778689846|ref|XP_011653028.1|3.4e-8585.56PREDICTED: GEM-like protein 5 [Cucumis sativus][more]
gi|659108238|ref|XP_008454090.1|2.9e-8484.49PREDICTED: GEM-like protein 5 [Cucumis melo][more]
gi|567892633|ref|XP_006438837.1|1.3e-6574.40hypothetical protein CICLE_v10032479mg [Citrus clementina][more]
gi|641864464|gb|KDO83150.1|5.1e-6570.72hypothetical protein CISIN_1g024728mg [Citrus sinensis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004182GRAM
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048316 seed development
biological_process GO:0009845 seed germination
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0010286 heat acclimation
biological_process GO:0098755 maintenance of seed dormancy by absisic acid
biological_process GO:0010029 regulation of seed germination
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g13070.1Cp4.1LG03g13070.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004182GRAM domainPFAMPF02893GRAMcoord: 135..174
score: 1.8
NoneNo IPR availablePANTHERPTHR31969FAMILY NOT NAMEDcoord: 15..174
score: 5.4
NoneNo IPR availablePANTHERPTHR31969:SF3GEM-LIKE PROTEIN 5coord: 15..174
score: 5.4

The following gene(s) are paralogous to this gene:

None