CsGy3G038660 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G038660
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Ribosomal protein L34
Location	Chr3 : 36318323 .. 36323931 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTCTTTTTCTTTTACAATAAATAAATATACAAGAAATTTGGGTAATTATGTTTGTTTGAAGAAAGGATTTTTTTTCTTCTTTTAAAAAGATGATAAATGAAAAGAAAAAGGAAATGTACCCTACGGTTCCTCGCACTTCTGTTCACACCCCACCCCACCTTCGCCACAGCGCACACCGCCGCTAACCCACAGGGAATTTTCTTTCTTCTCCCTCGATCTCCAGCGGCAGCTACACCAACTTTTCATTTTGCTGCACACTGTCACCAACCTCACTGCCACGCCCACCTTTTATTTCTAAGGGTTAGTGAGCTCGTTCTTTTGCTAATGGCGTCCAAACTTCTTATTCGTACGGGAAGTTCTTTGATGAATCGATTGCGATTAAGCTCAGCGCATCAGAATAACAGGATTTGGGGTAGCCAAGCTCTGTCCCATGGCCATGGCGTTGAAGTTACTCCGATGCTTTTTCCTTCAGTTTCTAAGCACCAGACTGCTCATCCTTTGCAGCAGAATGACACCGAATCGTTGAGGCAGCTCCAATCGGAAGGCATTTTCTTTCCTTTTGGGCTTCCTTCGCTCCGGTTCTTTTTGCCTGACGGTATGCTTCTTTTTCTTTTCTTACTCTGCTTGAAATGGTTTTGAAAGTCAATTTATAGTGTATGTGGATTCTGTTGCGTGTTAATGTTTGGTATGAGTTAGTAGCATGATTTTTCAGGCTGCATCTTTTTGTGGTAGTTTCTAATTTCAATTAATTGACTTATATAATTATAAGTGAAAGTGAGATTGTCAAGTGTTTCTGAGCGGCATATCTTTTTGCCTCTTTTGAGGCTATGAGAAAGTGTTGGGTGCCAAAACTATTAGCCAGTCACTCAAGCTTCAGAAATGGCTGCTCAATTAATCTTGAGAACCTTCTTGGCAGTGCAGATACTTGCCTGCCAGCGTCACTTTGATCATGCTGAAGGATATCTACTTGTTCTGTAAGGATCTGACTTCGGTTCTGGAAAATATTCTGTGAACCATGTTCTGTAAGGATTAGGGCTCCAAACACGAGTAAGCCTGTCTCCATGCAATAAGTTGAAACCCTCTATTAAAGTAAGAATTGAGATCACCTTCATCGTTTCTCTATTGGAGAGAGTGTAAAAAACCAAAGGATAAGGACACAAAACTCCCTGGCCAAACCAAAAATTTAGATACCTGAAGAATTTTGAAGGACAAATGATATAACCAAGGAAACGCATAAATGAATGTCCTTTTCCTAGCCCAATGATCTTCTAAAATATATGTTTCCTTCCTTTCCCCCACAACACAAAGACCAGATGGGAAAAGGAAGGGAGCTCAAAAGAGATCTCTTTCCACAGATGTCGAAGTGTGCCTTTAACACCTTTCTCCGTTCGTTCAAAGGGGTGGGGACTATTTTTACTCATTTTTTTGTGGTATATCTAACCGGAGGGAAATTGGAGAATCTTTATCTACACTTGAAGCAAAGGTGTTTTGTAGCAAAGTAATGATAGGATTGGGAGTAGGTAAAATATGGCAATTGGGAGGGTGATTTATTTGGTGTTTCTCAGGGAGATGTATCAATAAATGAAAGTAGGCAAAATGTGGGAGACTAGTTGGAGGTTTATGGGTAAGATTAGTATAGTTTTAGTAAGGGATTAGGGGTAATTAAGGACCTTGGGCAGTGAGAAGAATTTGGGTAGTGTCCTTTGTAGGACTTTAGGAGAGAAGTAGCCCTCTAAAAAAGGCTATTATATTTTAATTTATTTACCAATTGCAATATAGTTATTGCTAGTGTTTATTAGGGATTGGTAATGGGCTCTGTTGCTTGGATTTCTGAGAACTGTTCCTGTGAAAAAAATTTGCCAGTGTAGTTTGTTCATATGGTATCTATTTTCTGTTTTAGAAAGCTGTTGGAAGAGTGAGTTTTTATCTTCTCATTTTTATTCATTCTCTCATTGATGCCAACTTAAAAATACATCATACAGAGATTAGTGTATAACGGAAGAATCAAGTTAAAGAGCCGGGTACAACAGTCGTACTTATGTTTAGTGTGTTTTTTTTTTTTTTTTTGTCTATTCCTACCAAATTGTTATAAGTATGAATTTGTTCTAGGAGCATCAATTTTGTCCATAGCTTTGGATCTAGAAGTGCTCAATTTTGTGTTAGAGAAGTTTTTGCATGATATTATTGAGGGCTTGGAGGGAGTTGGATGATTCGAATGAAAAAGAGTTTTAAGGTTTCAATCAACGAAGCATAGACGTGTACAGTGAAAGAGAAGAACAAAAATGAATGCCAACTAACAAGGTAATGATAGAAAACGAGAGTAAGAAAAAATCCATTGGATCAAAGATTAGCCACAACTTTGTTTAGAAACTATCAAATCATATGCGCTATTGAATTGTGGCTTGACGACATCAATACGAGCCGAGAACACATAAAATAACTAAAGGGTAAACAAATTGATGAGGCAAAAGAGAAGGAAAGAAGAATGATGCAAGGGGAGGGAGAACCTACTGACAAAGTTATGGTTGGAGAGACAATGTAATGTGCAAGGAAAAGCTATCTGGTGGTTAAATGGTTGGAAAAAATGTGGTGGCGGATGAAAGAAGTAACAAACACAAGTGTTGTTCAAAGCGCCACTGCTAGTTTAATGAGGAGAGCATGAAAAAAATTATAGAGGGACAACCATGAAGGAACCATTGAAGTAAATCATTTTTGGCGACAAGTGTAGGTGTGGCTAAAGAAGAAGTCCCAAAGAAGACAATAGGGTAGGGTTCTTTTTCAAGTGGATATCCATGAACGGTAGCCGGTAGGTTAGAAACTGAAAAGAAAAAGAGTACTTATTTCATAATCATGGGTTAGGTAAGTTATGTTTTTATGGGATGGATTTTAACCATGGAGATGAGGTTGATTCTATTTGCAAAGTCAGAAAACAAGATTGTTTTACAAGCTGGGTTTCGGTTTGGGTTTCCTATTCTGTCTTAAACCCAGGAGTTTACCTACTATGGTGACGTGATATACCATACCCATCAGAAGGAACTACTCTAACTGCATGGTATTTTGCTCTTCACCCACACTTTCGACCATCACTATCGAGCAAGTTAACAATGCTAATCATTACATGTTCGCAAGCAAATGCCATCGATCATCAATACCATCTACCATGTCTGTGCCTCAGCCACTCGCCACCTTCCATTTCTCACGATTGTCGGAGTGCTAACCATCTGTTTTCAATTTTAATTTTGTAAATGTGTATTAAATTATGTTTTTTTTGTTGTAAAAAAATTGTATATCATTCCACTATTGCCTGATTTTGTCTTTATGTTTTCATAAGCACACTTTGAGGACAAGGTCCCTTTAAAAGGTGGGGTGATGTGAGAGATACTATTTAGGGGTATATGGGCAAGATTAGCATGATATTAGTAATAATTAGCAAGGGGTGTCTTGATTATAAATAGAGTGTGTTAAGGATCTTAGACGTTATGAAGAATTTAGGTAGTGTCCTTTGTGGAACTTTGAGAGACAAGTAACTCTCTTCTATTACATTGTAATTTTTTTACCAATATTGCAGTATAGTATAGTAATCTTTACTGTTCTTTTGTAGTTTTTGTGTCCGGGTACTAAACATTGTGTTATTTTGAGTTGCTTATGAGGGGAGGCCGTAGGTGTCAAAGCTCTCATTTTCAGCCTTTCTGGGAGAAATCTCTCTTTAGCATTCTTGATGGAGGTGCACTTCAAGTTGCACACCCGAGTAAATAAATACTTAGTTTTGGTAGTTTGTGATTATCTTAACCTTCCTGTGACTAGCTGTCCGAGTTATGATGTATGGATTCCCTTCATTAAATGGAGCTTTGTAGATAACAATTTTGTGGACTCGGATGATACTTTAATCTTCATTGCTTTTTTGTATTATTATTTTTTCAAAATTAAGGCATAATTCTTTGTTTCTGCAGGAGATGCTTCTTCAACACAAGAACCGATGCTCTTATTTCCTAAAAGGACATTTCAACCTAGCACCATCAGGCGAAAAAGGAATCATGGTTTTTTTGCTCGGTATCTCTCCATTGGCTTTTCTGCATGTATATTCTTTTATGTAATGTTTTTAGAAAGGACTATCTATAGTTTGCAAATAAACATTATTCTTTCCTTAAGCATGCCCTATTAAGTTTTGTGGTAAAGTTCTTTTTTCGTGGAAGAAACATGAGGAACTTCATTAATGAATGAAGTGAAAAAAATGGGTGCAAAAACACTCCCAATAGGCATAGGTGGATTATCACAAAACTGGATAATCCACCTATCAGAAAATATGCCTGGAAATTGGAATGTGTATACCAACCAACCACTACGCTTAGAAACTCACGCATGTTTTCAATTATGAAGCTTGGAGTCAATTCTTACATTAGCCAGCGGCCAAAAGATTGAACTACTCTTTTGATTTTTACCCAATGGGAAACAAAAATAGTTGGAAGGACAAGTACCTAGCTTACAACCAAATTTCCCGTTGGAAAAAGAAAAATCTGACTTATTATCATGAATGCCAACATTTCATGCCATAATTTACTTTCAACCCTGAAGTGGCATCATAGGTTGTCCAACTTCCTTAATGTAACTAGTTTATCTGTATTGGTTGTTTGGAGTAAAGAAAAAAAAGTTACCACCCTACAAAAATTAGTTTGGCTGGCTAGATTAGCTTTAGAAGGGAATGTAACAAATCATTACATAAGTGCATTCTTAACCAAAAAAAAAAAGACTCATAATGTGCATTAGAAATCACTCGTTTATCTTTGAACAGCAAAGCAACCAAGGGAGGACGGAAAGTTATTGCTCGAAGGATTGCAAAGGGGCGCTCAAGAATAACTGCATAATGTTCATCTCAAGTCAGGTGCAATTGAATCGCCCTACCAATATCTTATTGTGTTAGTTTTTTTAAATTTAAAATTAACTCAATAGAATGGTATCGCTGGCTGAATAACCCCTTTTGTCTTTCTTCTTAGGCCTCGGAATACAGTCTGTATAAACTTCTCTGTTTTTAGAATTACCATGCATTAAACACCTTCCATATTGAAGTTTAAGTTACTCTTAATTTTTATTTCTTTCTTAACTTAGCTAGAGAATTGTTTACTTTTGGTTCATGGTGAGTGTTGATACTGGCTCCTGAGCAAATAAACAAACTCAAGTCCGAAAGTTGGGAAAAGGAAGAGGATGTGATTTTTTAAGTCAGTTTAGGACTAAAATCATTACTTATCCATATGTTCTTTTGTTTTAATATTATTTTCTCCCACAAAAATAAATTATTAATAGGCCAAATTGCAAAAATCACCTTTAGTACTTGTAAAGTTGCAATTACATGTCAAATTCTTAAACTTGTACAATTGTAAAAATCTTAACAATCTTTGAAGGTTGCTAGTCAATTTTCATCATTTGGGGCTTCAATTTTTCAAACTAGGGTAAGTTTAAAAGTTCAATTTTCACCATTTTAAAATGTGGGTCTCAATTGTACACTTTCAAGTTAGAAATTGAAAGTACCACCATAATTTGGCTTTTCTTTTATGTTATTAGGTCTTGTGGATATTATTTTGGAGTTTGTATATTTGGATTCATTTTGTTGTA

mRNA sequence

TTTTCTTTTTCTTTTACAATAAATAAATATACAAGAAATTTGGGTAATTATGTTTGTTTGAAGAAAGGATTTTTTTTCTTCTTTTAAAAAGATGATAAATGAAAAGAAAAAGGAAATGTACCCTACGGTTCCTCGCACTTCTGTTCACACCCCACCCCACCTTCGCCACAGCGCACACCGCCGCTAACCCACAGGGAATTTTCTTTCTTCTCCCTCGATCTCCAGCGGCAGCTACACCAACTTTTCATTTTGCTGCACACTGTCACCAACCTCACTGCCACGCCCACCTTTTATTTCTAAGGGTTAGTGAGCTCGTTCTTTTGCTAATGGCGTCCAAACTTCTTATTCGTACGGGAAGTTCTTTGATGAATCGATTGCGATTAAGCTCAGCGCATCAGAATAACAGGATTTGGGGTAGCCAAGCTCTGTCCCATGGCCATGGCGTTGAAGTTACTCCGATGCTTTTTCCTTCAGTTTCTAAGCACCAGACTGCTCATCCTTTGCAGCAGAATGACACCGAATCGTTGAGGCAGCTCCAATCGGAAGGCATTTTCTTTCCTTTTGGGCTTCCTTCGCTCCGGTTCTTTTTGCCTGACGCAAAGCAACCAAGGGAGGACGGAAAGTTATTGCTCGAAGGATTGCAAAGGGGCGCTCAAGAATAACTGCATAATGTTCATCTCAAGTCAGGTGCAATTGAATCGCCCTACCAATATCTTATTGTGTTAGTTTTTTTAAATTTAAAATTAACTCAATAGAATGGTATCGCTGGCTGAATAACCCCTTTTGTCTTTCTTCTTAGGCCTCGGAATACAGTCTGTATAAACTTCTCTGTTTTTAGAATTACCATGCATTAAACACCTTCCATATTGAAGTTTAAGTTACTCTTAATTTTTATTTCTTTCTTAACTTAGCTAGAGAATTGTTTACTTTTGGTTCATGGTGAGTGTTGATACTGGCTCCTGAGCAAATAAACAAACTCAAGTCCGAAAGTTGGGAAAAGGAAGAGGATGTGATTTTTTAAGTCAGTTTAGGACTAAAATCATTACTTATCCATATGTTCTTTTGTTTTAATATTATTTTCTCCCACAAAAATAAATTATTAATAGGCCAAATTGCAAAAATCACCTTTAGTACTTGTAAAGTTGCAATTACATGTCAAATTCTTAAACTTGTACAATTGTAAAAATCTTAACAATCTTTGAAGGTTGCTAGTCAATTTTCATCATTTGGGGCTTCAATTTTTCAAACTAGGGTAAGTTTAAAAGTTCAATTTTCACCATTTTAAAATGTGGGTCTCAATTGTACACTTTCAAGTTAGAAATTGAAAGTACCACCATAATTTGGCTTTTCTTTTATGTTATTAGGTCTTGTGGATATTATTTTGGAGTTTGTATATTTGGATTCATTTTGTTGTA

Coding sequence (CDS)

ATGAAAAGAAAAAGGAAATGTACCCTACGGTTCCTCGCACTTCTGTTCACACCCCACCCCACCTTCGCCACAGCGCACACCGCCGCTAACCCACAGGGAATTTTCTTTCTTCTCCCTCGATCTCCAGCGGCAGCTACACCAACTTTTCATTTTGCTGCACACTGTCACCAACCTCACTGCCACGCCCACCTTTTATTTCTAAGGGTTAGTGAGCTCGTTCTTTTGCTAATGGCGTCCAAACTTCTTATTCGTACGGGAAGTTCTTTGATGAATCGATTGCGATTAAGCTCAGCGCATCAGAATAACAGGATTTGGGGTAGCCAAGCTCTGTCCCATGGCCATGGCGTTGAAGTTACTCCGATGCTTTTTCCTTCAGTTTCTAAGCACCAGACTGCTCATCCTTTGCAGCAGAATGACACCGAATCGTTGAGGCAGCTCCAATCGGAAGGCATTTTCTTTCCTTTTGGGCTTCCTTCGCTCCGGTTCTTTTTGCCTGACGCAAAGCAACCAAGGGAGGACGGAAAGTTATTGCTCGAAGGATTGCAAAGGGGCGCTCAAGAATAA

Protein sequence

MKRKRKCTLRFLALLFTPHPTFATAHTAANPQGIFFLLPRSPAAATPTFHFAAHCHQPHCHAHLLFLRVSELVLLLMASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDAKQPREDGKLLLEGLQRGAQE

Homology

[Close]

BLAST of CsGy3G038660 vs. NCBI nr
Match: KGN59796.1 (hypothetical protein Csa_3G847215 [Cucumis sativus])

HSP 1 Score: 336.7 bits (862), Expect = 5.2e-89
Identity = 168/178 (94.38%), Postives = 169/178 (94.94%), Query Frame = 0


Query: 1   MKRKRKCTLRFLALLFTPHPTFATAHTAANPQGIFFLLPRSPAAATPTFHFAAHCHQPHC 60
           MKRKRKCTLRFLALLFTPHPTFATAHTAANPQGIFFLLPRSPAAATPTFHFAAHCHQPHC
Sbjct: 1   MKRKRKCTLRFLALLFTPHPTFATAHTAANPQGIFFLLPRSPAAATPTFHFAAHCHQPHC 60

Query: 61  HAHLLFLRVSELVLLLMASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTP 120
           HAHLLFLRVSELVLLLMASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTP
Sbjct: 61  HAHLLFLRVSELVLLLMASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTP 120

Query: 121 MLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDAKQPREDGKLLL 179
           MLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPD         +LL
Sbjct: 121 MLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPMLL 178

[Close]

BLAST of CsGy3G038660 vs. NCBI nr
Match: XP_004141160.1 (PREDICTED: uncharacterized protein LOC101210601 [Cucumis sativus])

HSP 1 Score: 183.7 bits (465), Expect = 5.6e-43
Identity = 92/102 (90.20%), Postives = 93/102 (91.18%), Query Frame = 0


Query: 77  MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQ 136
           MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQ
Sbjct: 1   MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQ 60

Query: 137 QNDTESLRQLQSEGIFFPFGLPSLRFFLPDAKQPREDGKLLL 179
           QNDTESLRQLQSEGIFFPFGLPSLRFFLPD         +LL
Sbjct: 61  QNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPMLL 102

[Close]

BLAST of CsGy3G038660 vs. NCBI nr
Match: XP_008447614.1 (PREDICTED: uncharacterized protein LOC103490028 [Cucumis melo])

HSP 1 Score: 178.7 bits (452), Expect = 1.8e-41
Identity = 89/102 (87.25%), Postives = 91/102 (89.22%), Query Frame = 0


Query: 77  MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQ 136
           MASKLLIRTG+S MNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQ AHPLQ
Sbjct: 1   MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQ 60

Query: 137 QNDTESLRQLQSEGIFFPFGLPSLRFFLPDAKQPREDGKLLL 179
           QNDTESLRQLQSEGIFFPFGLPSLRFFLPD         +LL
Sbjct: 61  QNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPMLL 102

[Close]

BLAST of CsGy3G038660 vs. NCBI nr
Match: XP_022955351.1 (uncharacterized protein LOC111457406 isoform X1 [Cucurbita moschata])

HSP 1 Score: 170.6 bits (431), Expect = 4.9e-39
Identity = 96/156 (61.54%), Postives = 102/156 (65.38%), Query Frame = 0


Query: 77  MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQ 136
           MASKLLIRTG+SLMNRLRLSS HQNN IW SQ+LS GHGV+VTPMLFPSVSKHQTAH LQ
Sbjct: 1   MASKLLIRTGNSLMNRLRLSSTHQNNWIWSSQSLSQGHGVDVTPMLFPSVSKHQTAHHLQ 60

Query: 137 QNDTESLRQLQSEGIFFPFGLPSLRFFLPD------------------------------ 188
           QNDTESLR+L+SEGIFFPFGLPSLRFFLPD                              
Sbjct: 61  QNDTESLRKLESEGIFFPFGLPSLRFFLPDGDTSSTQEPMLLFPKRTFQPSTIRRKRNHG 120

[Close]

BLAST of CsGy3G038660 vs. NCBI nr
Match: XP_023526191.1 (uncharacterized protein LOC111789743 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 168.3 bits (425), Expect = 2.5e-38
Identity = 95/156 (60.90%), Postives = 101/156 (64.74%), Query Frame = 0


Query: 77  MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQ 136
           MASKLLIRTG+SLMNRLRLSS HQNN IW SQ+LS GHGV+VTPMLFPSVSKHQ AH LQ
Sbjct: 1   MASKLLIRTGNSLMNRLRLSSTHQNNWIWSSQSLSQGHGVDVTPMLFPSVSKHQPAHHLQ 60

Query: 137 QNDTESLRQLQSEGIFFPFGLPSLRFFLPD------------------------------ 188
           QNDTESLR+L+SEGIFFPFGLPSLRFFLPD                              
Sbjct: 61  QNDTESLRKLESEGIFFPFGLPSLRFFLPDGDTSSTQEPMLLFPKRTFQPSTIRRKRNHG 120

[Close]

BLAST of CsGy3G038660 vs. TAIR10
Match: AT3G13882.2 (Ribosomal protein L34)

HSP 1 Score: 55.5 bits (132), Expect = 4.2e-08
Identity = 25/52 (48.08%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 115 GVEVTPMLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPD 167
           G E+ P  FPS+S  Q++   + NDT SL++L   G  +P GLPSL FFLP+
Sbjct: 48  GQEIPPYFFPSLSNLQSSLISRPNDTASLQELNERGFLYPSGLPSLEFFLPE 99

[Close]

BLAST of CsGy3G038660 vs. TrEMBL
Match: tr|A0A0A0LIB6|A0A0A0LIB6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G847215 PE=3 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 3.4e-89
Identity = 168/178 (94.38%), Postives = 169/178 (94.94%), Query Frame = 0


Query: 1   MKRKRKCTLRFLALLFTPHPTFATAHTAANPQGIFFLLPRSPAAATPTFHFAAHCHQPHC 60
           MKRKRKCTLRFLALLFTPHPTFATAHTAANPQGIFFLLPRSPAAATPTFHFAAHCHQPHC
Sbjct: 1   MKRKRKCTLRFLALLFTPHPTFATAHTAANPQGIFFLLPRSPAAATPTFHFAAHCHQPHC 60

Query: 61  HAHLLFLRVSELVLLLMASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTP 120
           HAHLLFLRVSELVLLLMASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTP
Sbjct: 61  HAHLLFLRVSELVLLLMASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTP 120

Query: 121 MLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDAKQPREDGKLLL 179
           MLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPD         +LL
Sbjct: 121 MLFPSVSKHQTAHPLQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPMLL 178

[Close]

BLAST of CsGy3G038660 vs. TrEMBL
Match: tr|A0A1S3BHV7|A0A1S3BHV7_CUCME (uncharacterized protein LOC103490028 OS=Cucumis melo OX=3656 GN=LOC103490028 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.2e-41
Identity = 89/102 (87.25%), Postives = 91/102 (89.22%), Query Frame = 0


Query: 77  MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQ 136
           MASKLLIRTG+S MNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQ AHPLQ
Sbjct: 1   MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQ 60

Query: 137 QNDTESLRQLQSEGIFFPFGLPSLRFFLPDAKQPREDGKLLL 179
           QNDTESLRQLQSEGIFFPFGLPSLRFFLPD         +LL
Sbjct: 61  QNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPMLL 102

[Close]

BLAST of CsGy3G038660 vs. TrEMBL
Match: tr|A0A2C9UXQ6|A0A2C9UXQ6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G024800 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 3.3e-15
Identity = 56/98 (57.14%), Postives = 63/98 (64.29%), Query Frame = 0


Query: 77  MASKLLIRTGSSLMNRLRLSS--AHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHP 136
           MASK LIRTG+SLMNR  LS+   HQN     SQ LS   G E+TP LFPS+SK QT+  
Sbjct: 1   MASKTLIRTGASLMNRFFLSNPILHQNPNP-NSQLLS--RGFEITPRLFPSLSKFQTSLH 60

Query: 137 LQQNDTESLRQLQSEGIFFPFGLPSLRFFLPDAKQPRE 173
           L QND  S  +L +E  F P GLPSLRFFLPD     E
Sbjct: 61  LTQNDAHSFNKLSNEEFFHPCGLPSLRFFLPDGDSSSE 95

[Close]

BLAST of CsGy3G038660 vs. TrEMBL
Match: tr|M5XB86|M5XB86_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G047000 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.3e-15
Identity = 50/102 (49.02%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 77  MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQ 136
           MASK LIRTG+SLMNR+        N     Q +S  HG+E+TP LFPS+S   T+  L 
Sbjct: 1   MASKTLIRTGASLMNRILSKPLLHPNPNSNHQIVS--HGLEITPKLFPSLSNFDTSFRLP 60

Query: 137 QNDTESLRQLQSEGIFFPFGLPSLRFFLPDAKQPREDGKLLL 179
           QND ESL+++  EG+ +PFGLP L FFLPD         +LL
Sbjct: 61  QNDAESLKRVSYEGLVYPFGLPYLPFFLPDGDDSSSSEPMLL 100

[Close]

BLAST of CsGy3G038660 vs. TrEMBL
Match: tr|A0A2R6PT60|A0A2R6PT60_ACTCH (50S ribosomal protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc22308 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 7.3e-15
Identity = 46/102 (45.10%), Postives = 65/102 (63.73%), Query Frame = 0


Query: 77  MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQ 136
           MASK L+R+G+SLMNRL +    +N     +  ++     E+TP++FPS+SK Q +  L 
Sbjct: 1   MASKTLVRSGASLMNRLLIQLQKKNAS--SNHLITSSTSTEITPLIFPSLSKFQNSLHLP 60

Query: 137 QNDTESLRQLQSEGIFFPFGLPSLRFFLPDAKQPREDGKLLL 179
            ND E+L+++ SEG  +P GLPSLRFFLPD   P     +LL
Sbjct: 61  HNDAETLKRVSSEGFLYPCGLPSLRFFLPDGDGPSSSEPMLL 100

The following BLAST results are available for this feature:

BLAST of CsGy3G038660 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN59796.1	5.2e-89	94.38	hypothetical protein Csa_3G847215 [Cucumis sativus]	[more]
XP_004141160.1	5.6e-43	90.20	PREDICTED: uncharacterized protein LOC101210601 [Cucumis sativus]	[more]
XP_008447614.1	1.8e-41	87.25	PREDICTED: uncharacterized protein LOC103490028 [Cucumis melo]	[more]
XP_022955351.1	4.9e-39	61.54	uncharacterized protein LOC111457406 isoform X1 [Cucurbita moschata]	[more]
XP_023526191.1	2.5e-38	60.90	uncharacterized protein LOC111789743 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy3G038660 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G13882.2	4.2e-08	48.08	Ribosomal protein L34	[more]

BLAST of CsGy3G038660 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy3G038660 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LIB6\|A0A0A0LIB6_CUCSA	3.4e-89	94.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G847215 PE=3 SV=1	[more]
tr\|A0A1S3BHV7\|A0A1S3BHV7_CUCME	1.2e-41	87.25	uncharacterized protein LOC103490028 OS=Cucumis melo OX=3656 GN=LOC103490028 PE=...	[more]
tr\|A0A2C9UXQ6\|A0A2C9UXQ6_MANES	3.3e-15	57.14	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G024800 PE=3 SV=...	[more]
tr\|M5XB86\|M5XB86_PRUPE	4.3e-15	49.02	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G047000 PE=3 SV=1	[more]
tr\|A0A2R6PT60\|A0A2R6PT60_ACTCH	7.3e-15	45.10	50S ribosomal protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome
GO:0005622	intracellular

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR000271	Ribosomal_L34

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G038660.1	CsGy3G038660.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR14503:SF6	RIBOSOMAL PROTEIN L34	coord: 77..173
IPR000271	Ribosomal protein L34	PANTHER	PTHR14503	FAMILY NOT NAMED	coord: 77..173

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G038660	Cla012589	Watermelon (97103) v1	cgybwmB203
CsGy3G038660	ClCG07G013950	Watermelon (Charleston Gray)	cgybwcgB236
CsGy3G038660	CSPI03G41190	Wild cucumber (PI 183967)	cgybcpiB111
CsGy3G038660	CmaCh14G012470	Cucurbita maxima (Rimu)	cgybcmaB309
CsGy3G038660	CmoCh01G000520	Cucurbita moschata (Rifu)	cgybcmoB331
CsGy3G038660	CmoCh14G012820	Cucurbita moschata (Rifu)	cgybcmoB282
CsGy3G038660	Lsi07G005980	Bottle gourd (USVL1VR-Ls)	cgyblsiB221
CsGy3G038660	Cp4.1LG03g14580	Cucurbita pepo (Zucchini)	cgybcpeB399
CsGy3G038660	MELO3C013069.2	Melon (DHL92) v3.6.1	cgybmedB179
CsGy3G038660	CsaV3_3G043640	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G038660	Cla97C07G140730	Watermelon (97103) v2	cgybwmbB229
CsGy3G038660	Bhi01G002142	Wax gourd	cgybwgoB277
CsGy3G038660	Carg06422	Silver-seed gourd	carcgybB0124

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G038660	Cucurbita pepo (Zucchini)	cgybcpeB305
CsGy3G038660	Cucurbita pepo (Zucchini)	cgybcpeB350
CsGy3G038660	Cucumber (Gy14) v2	cgybcgybB114
CsGy3G038660	Cucurbita maxima (Rimu)	cgybcmaB347
CsGy3G038660	Cucurbita maxima (Rimu)	cgybcmaB360
CsGy3G038660	Cucurbita maxima (Rimu)	cgybcmaB460
CsGy3G038660	Cucurbita moschata (Rifu)	cgybcmoB319
CsGy3G038660	Cucurbita moschata (Rifu)	cgybcmoB427
CsGy3G038660	Cucurbita pepo (Zucchini)	cgybcpeB389
CsGy3G038660	Cucumber (Chinese Long) v2	cgybcuB110
CsGy3G038660	Cucumber (Chinese Long) v2	cgybcuB149
CsGy3G038660	Bottle gourd (USVL1VR-Ls)	cgyblsiB159
CsGy3G038660	Melon (DHL92) v3.5.1	cgybmeB158
CsGy3G038660	Melon (DHL92) v3.5.1	cgybmeB177
CsGy3G038660	Melon (DHL92) v3.6.1	cgybmedB156
CsGy3G038660	Watermelon (Charleston Gray)	cgybwcgB170
CsGy3G038660	Watermelon (97103) v1	cgybwmB178
CsGy3G038660	Wild cucumber (PI 183967)	cgybcpiB152
CsGy3G038660	Silver-seed gourd	carcgybB0211
CsGy3G038660	Silver-seed gourd	carcgybB1008
CsGy3G038660	Cucumber (Chinese Long) v3	cgybcucB155
CsGy3G038660	Watermelon (97103) v2	cgybwmbB249
CsGy3G038660	Wax gourd	cgybwgoB332