CsGy3G035340 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G035340
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr3 : 33882746 .. 33883459 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTGACTCATTCCTATGTAGAAAAAATGAAAGACAAAATACTTATATATTTCCAAACCTCCAACCCCACCTAACCTAATCAATTGATTCCTTTGCTTTCACCCCTTCAACTTCATTGTTCCTTTTCCATACCCAACAACAAAGAAACCCCCCTTTGAATATGGCTGCAACAATGGCGAATCTTGACGAGTCGTGACACCAGTGTTGGCCACAGGTGGTGGTTCGATCCCTTTCTCCTGTCTCCTTCCATGGTGCAAACGATCGAGTGCGGAACGCTGTTTCAGACGTTTCCACTCTCATCGTTCCTTACAACAAAGAGGTTTTATTTTTTCATTCAAGATTTTTCTTCCATGTTTCCCGGCCACTCAAAAAAAGTCGTCGGTGGAGGTTTTGTCCACGTTTTTCTCAAGACCAAAATTCTTGTAGTGTTGGTTGCATAAATTTCACTAACGTTTTTCTTTGGTTAGATCTTTCGACGACGGTTTTGACGTAGGAGGCAAGAGAAGAGGCATATACGACGTCATCTATATTTGATGGTAAACTTCTGCAGTCTAAGTTCAGTGATGGTTTTACTTCTGTGGACAGCTTCTTTGCTTCTGTTGCCACTGGTGGTGCCGCCGCTTCCTCCGCCACCGTTGGCGATTCTCGGGCTGCCGGTTTTGATATTGGGTGTTTTGTTGTTCTTGGCTTTCTCTTCTTCTCAACGGATCCCTAA

mRNA sequence

ATTGACTCATTCCTATGTAGAAAAAATGAAAGACAAAATACTTATATATTTCCAAACCTCCAACCCCACCTAACCTAATCAATTGATTCCTTTGCTTTCACCCCTTCAACTTCATTGTTCCTTTTCCATACCCAACAACAAAGAAACCCCCCTTTGAATATGGCTGCAACAATGGCGAATCTTGACGAGTCGTGACACCAGTGTTGGCCACAGGTGGTGGTTCGATCCCTTTCTCCTGTCTCCTTCCATGGTGCAAACGATCGAGTGCGGAACGCTGTTTCAGACGTTTCCACTCTCATCGTTCCTTACAACAAAGAGATCTTTCGACGACGGTTTTGACGTAGGAGGCAAGAGAAGAGGCATATACGACTCTAAGTTCAGTGATGGTTTTACTTCTGTGGACAGCTTCTTTGCTTCTGTTGCCACTGGTGGTGCCGCCGCTTCCTCCGCCACCGTTGGCGATTCTCGGGCTGCCGGTTTTGATATTGGGTGTTTTGTTGTTCTTGGCTTTCTCTTCTTCTCAACGGATCCCTAA

Coding sequence (CDS)

ATGGTGCAAACGATCGAGTGCGGAACGCTGTTTCAGACGTTTCCACTCTCATCGTTCCTTACAACAAAGAGATCTTTCGACGACGGTTTTGACGTAGGAGGCAAGAGAAGAGGCATATACGACTCTAAGTTCAGTGATGGTTTTACTTCTGTGGACAGCTTCTTTGCTTCTGTTGCCACTGGTGGTGCCGCCGCTTCCTCCGCCACCGTTGGCGATTCTCGGGCTGCCGGTTTTGATATTGGGTGTTTTGTTGTTCTTGGCTTTCTCTTCTTCTCAACGGATCCCTAA

Protein sequence

MVQTIECGTLFQTFPLSSFLTTKRSFDDGFDVGGKRRGIYDSKFSDGFTSVDSFFASVATGGAAASSATVGDSRAAGFDIGCFVVLGFLFFSTDP
Homology
[Close]
BLAST of CsGy3G035340 vs. NCBI nr
Match: KGN59450.1 (hypothetical protein Csa_3G821040 [Cucumis sativus])

HSP 1 Score: 186.8 bits (473), Expect = 3.4e-44
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MVQTIECGTLFQTFPLSSFLTTKRSFDDGFDVGGKRRGIYDSKFSDGFTSVDSFFASVAT 60
          MVQTIECGTLFQTFPLSSFLTTKRSFDDGFDVGGKRRGIYDSKFSDGFTSVDSFFASVAT
Sbjct: 1  MVQTIECGTLFQTFPLSSFLTTKRSFDDGFDVGGKRRGIYDSKFSDGFTSVDSFFASVAT 60

Query: 61 GGAAASSATVGDSRAAGFDIGCFVVLGFLFFSTDP 96
          GGAAASSATVGDSRAAGFDIGCFVVLGFLFFSTDP
Sbjct: 61 GGAAASSATVGDSRAAGFDIGCFVVLGFLFFSTDP 95

[Close]
BLAST of CsGy3G035340 vs. NCBI nr
Match: XP_008443266.1 (PREDICTED: uncharacterized protein LOC103486890 [Cucumis melo])

HSP 1 Score: 132.9 bits (333), Expect = 5.8e-28
Identity = 77/106 (72.64%), Postives = 79/106 (74.53%), Query Frame = 0 

Query: 1   MVQTIECGTLFQTFPLSSFLTTKRSFDDGFDVGGK------RRGIYD-----SKFSDGFT 60
           MVQTIEC TLFQTFPL SFLT KRS DDGFDV  K         I+D     SKFSDGFT
Sbjct: 1   MVQTIECETLFQTFPLLSFLTIKRSSDDGFDVRDKIEKRPTTSSIFDGKLLRSKFSDGFT 60

Query: 61  SVDSFFASVATGGAAASSATVGDSRAAGFDIGCFVVLGFLFFSTDP 96
            VDSFFASVATGGAA    TVG SRAAGFDIGCFVVLGFLFFS+ P
Sbjct: 61  CVDSFFASVATGGAAXXXXTVGSSRAAGFDIGCFVVLGFLFFSSGP 106

[Close]
BLAST of CsGy3G035340 vs. TrEMBL
Match: tr|A0A0A0LBQ9|A0A0A0LBQ9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G821040 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.2e-44
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MVQTIECGTLFQTFPLSSFLTTKRSFDDGFDVGGKRRGIYDSKFSDGFTSVDSFFASVAT 60
          MVQTIECGTLFQTFPLSSFLTTKRSFDDGFDVGGKRRGIYDSKFSDGFTSVDSFFASVAT
Sbjct: 1  MVQTIECGTLFQTFPLSSFLTTKRSFDDGFDVGGKRRGIYDSKFSDGFTSVDSFFASVAT 60

Query: 61 GGAAASSATVGDSRAAGFDIGCFVVLGFLFFSTDP 96
          GGAAASSATVGDSRAAGFDIGCFVVLGFLFFSTDP
Sbjct: 61 GGAAASSATVGDSRAAGFDIGCFVVLGFLFFSTDP 95

[Close]
BLAST of CsGy3G035340 vs. TrEMBL
Match: tr|A0A1S3B754|A0A1S3B754_CUCME (uncharacterized protein LOC103486890 OS=Cucumis melo OX=3656 GN=LOC103486890 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.8e-28
Identity = 77/106 (72.64%), Postives = 79/106 (74.53%), Query Frame = 0 

Query: 1   MVQTIECGTLFQTFPLSSFLTTKRSFDDGFDVGGK------RRGIYD-----SKFSDGFT 60
           MVQTIEC TLFQTFPL SFLT KRS DDGFDV  K         I+D     SKFSDGFT
Sbjct: 1   MVQTIECETLFQTFPLLSFLTIKRSSDDGFDVRDKIEKRPTTSSIFDGKLLRSKFSDGFT 60

Query: 61  SVDSFFASVATGGAAASSATVGDSRAAGFDIGCFVVLGFLFFSTDP 96
            VDSFFASVATGGAA    TVG SRAAGFDIGCFVVLGFLFFS+ P
Sbjct: 61  CVDSFFASVATGGAAXXXXTVGSSRAAGFDIGCFVVLGFLFFSSGP 106

The following BLAST results are available for this feature:
BLAST of CsGy3G035340 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN59450.13.4e-44100.00hypothetical protein Csa_3G821040 [Cucumis sativus][more]
XP_008443266.15.8e-2872.64PREDICTED: uncharacterized protein LOC103486890 [Cucumis melo][more]
BLAST of CsGy3G035340 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy3G035340 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy3G035340 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LBQ9|A0A0A0LBQ9_CUCSA2.2e-44100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G821040 PE=4 SV=1[more]
tr|A0A1S3B754|A0A1S3B754_CUCME3.8e-2872.64uncharacterized protein LOC103486890 OS=Cucumis melo OX=3656 GN=LOC103486890 PE=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G035340.1CsGy3G035340.1mRNA