CsGy3G022940 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G022940
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr3 : 21788113 .. 21790235 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGACGACTACCCGAACCACGTCCGTCACGAGCCGGGAGACCACTCCAAGCCGTGCAGCCTCCATCTTTTCGTCTTACCGAGCTTCCAGCTTCTCCCATCACTCAGCTACGTTTTGCACATTGTTGCCCAACTCGGTTCTTAGACCATTGCCTTTTTACTCTACGACTTGCAGTGGATTTTTGGTGGTAATTAATTATCGTGGGTTATGGATATGTGATGTATTTTCTTTGGGAATGCAATGTTGAATTAATATATATGGGTTTTTTAAAGGTGTCGATGTGGATAGTGTTAGAGTTCTTGGAGTTTCGACGGGTTGGTTGAAGTTTAACTATTCACTTTTTGGGTAAGTTGTGAAATTTTCGTATAGGGTGAATATAATGGATGAAATTAATTAGAAAGATGTTGATTTCGTGTTTGTTTGTGTTTAGGATTTGATTGTTGGATTTAGTTCGATTGAGGAATTTGCATAAAAATCGAGGTAAGGGTTCCTACTATTGGACTCAACGATGAAATTGAGATGTATTGTCTGGGGTCCTAGCTGTATGAAAATTTGTTGAACTAAAATAAACTGATTGATACGTATACTTGGCTGGTTATGACGATTGAACTGATTAAGTTACGGTTTGTTGGTTGTTATGTTAGGGCATAGGTAGTGTCCTATAGTCGATGAACTAAATTGAATTGATTGAATTGAGAAGAGCGGTGCTTGTGTGTAAATTTATTCGTTGAGGAACTGTTATAATAATGTTGATTAGGTACTGGATTGCATAAATTGACTGAAAACGTGATGAACTTAGAGAATGATATAATGGTAGCTTAAACTGCAAAATTTGATTGATTGATTAAAAATATTAGATTGTGACTGAGGGGAAATTGTTAACTTTATCTATAGGGTAGTGTACCTTGCAGGTGTCCTACGGGATCAACACCTGTTGCACATTCTTCGGAAGCACTGGACTGAAATGTGTTTTCTACAAAACACTAGACTGATATGCACGTCCCTTGGGGCGTTTGACTGATTATGTGTATCATACGGGATCATAAGACTGTGACTGTGCAGGGTACCCCAATAGGAAGTTAACAGTTTATTTTTCCCCCAACGGGACTAATAGTTGGTCTCTTACTAAGTATGTTTATACTCACCCTTTTATGTTTAACTTTTTCAGGCAAATGTAACAAAGGTGGCAAACCGACGAGGGGCAGGAAGGAAGCGTGAACATTTTAAATTCGCTTCTGCACTACTATAAAAATAGGCTCTCTTGACGTTTTTAAACTGTCAAGAATCACTATTCTTGACGGTTTTAAAATCGTCGTTGAAGCCAGCGTCAAGAAAGCCAAAGTTCTTGACGGTTAATAGAAACAACAAGAATATTGAACGTTGACGTTTTATAAACGTCAAATATACAAATGTTCATGACAGTTAAAAACTGTCAAGAGTATGAATGTTTGTGTCAGTTTAAAACCGTCAAAAGTATAAGTGTTCATGACATTTAATAACCGTAAAAAAATTGATTGTTTATGACATTAAAAACCGTTAAGGATACACTTGTTTATGACATTTTAAAACCGTCAAGTATGTTATGAATTTTTTTATAAAAAAAATTGTAATTCAATTATATTTTTGTTTCTGTAATTCAATAATTTTATTTTAACACAAAACCAGTCACATATAAAGAACTTTCATATATAACAATAACATAGTTAACATTTTTACAAAGAAACTAAGTACACGAAATGTATCGAATTTTTCCAAAGGGAATACAAGTAAAATAGAAACTAAACCCTGGTAATATATTTTTACAAAGAAACTAAGTACAAGGTATTGTCGTGGATAATGAAATTATAACAAGTCTTGTCACTAATCAAATATCAATCACTTGCTTGGTAGCTTCATCACTATATAAATCAATCGGATATTAGTGCAAAACCTTGGTAATCTGAAATGTGTAGATGTTCCACTTCCACACCATCAGTGTCCTCCGTTTCATGACCTTCTTCATCGCCAGAATCTGCATCTCCTTCAAGTCTATTAGGATACTATTTATTCTTTTCAACATATTCTAAATGTGTAATAGAGAAAAACGAACATAAAGAAATGGATACAATATATCGAGTAAAATAA

mRNA sequence

CCGACGACTACCCGAACCACGTCCGTCACGAGCCGGGAGACCACTCCAAGCCGTGCAGCCTCCATCTTTTCGTCTTACCGAGCTTCCAGCTTCTCCCATCACTCAGCTACGTTTTGCACATTGTTGCCCAACTCGGTTCTTAGACCATTGCCTTTTTACTCTACGACTTGCAGTGGATTTTTGGTGGTAATTAATTATCGGAATACAAAATCTGCATCTCCTTCAAGTCTATTAGGATACTATTTATTCTTTTCAACATATTCTAAATGTGTAATAGAGAAAAACGAACATAAAGAAATGGATACAATATATCGAGTAAAATAA

Coding sequence (CDS)

CCGACGACTACCCGAACCACGTCCGTCACGAGCCGGGAGACCACTCCAAGCCGTGCAGCCTCCATCTTTTCGTCTTACCGAGCTTCCAGCTTCTCCCATCACTCAGCTACGTTTTGCACATTGTTGCCCAACTCGGTTCTTAGACCATTGCCTTTTTACTCTACGACTTGCAGTGGATTTTTGGTGGTAATTAATTATCGGAATACAAAATCTGCATCTCCTTCAAGTCTATTAGGATACTATTTATTCTTTTCAACATATTCTAAATGTGTAATAGAGAAAAACGAACATAAAGAAATGGATACAATATATCGAGTAAAATAA

Protein sequence

PTTTRTTSVTSRETTPSRAASIFSSYRASSFSHHSATFCTLLPNSVLRPLPFYSTTCSGFLVVINYRNTKSASPSSLLGYYLFFSTYSKCVIEKNEHKEMDTIYRVK
Homology
[Close]
BLAST of CsGy3G022940 vs. NCBI nr
Match: KGN58053.1 (hypothetical protein Csa_3G466700 [Cucumis sativus])

HSP 1 Score: 69.3 bits (168), Expect = 8.9e-09
Identity = 33/39 (84.62%), Postives = 34/39 (87.18%), Query Frame = 0 

Query: 29  SSFSHHSATFCTLLPNSVLRPLPFYSTTCSGFLVVINYR 68
           S+FSHHS TFCTLLPNSV RPLPFYSTTCS F VVIN R
Sbjct: 85  SNFSHHSVTFCTLLPNSVRRPLPFYSTTCSDFSVVINCR 123

[Close]
BLAST of CsGy3G022940 vs. TrEMBL
Match: tr|A0A0A0L8E5|A0A0A0L8E5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G466700 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.9e-09
Identity = 33/39 (84.62%), Postives = 34/39 (87.18%), Query Frame = 0 

Query: 29  SSFSHHSATFCTLLPNSVLRPLPFYSTTCSGFLVVINYR 68
           S+FSHHS TFCTLLPNSV RPLPFYSTTCS F VVIN R
Sbjct: 85  SNFSHHSVTFCTLLPNSVRRPLPFYSTTCSDFSVVINCR 123

The following BLAST results are available for this feature:
BLAST of CsGy3G022940 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58053.18.9e-0984.62hypothetical protein Csa_3G466700 [Cucumis sativus][more]
BLAST of CsGy3G022940 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy3G022940 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy3G022940 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L8E5|A0A0A0L8E5_CUCSA5.9e-0984.62Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G466700 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G022940.1CsGy3G022940.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy3G022940Csa3G466700Cucumber (Chinese Long) v2cgybcuB109
CsGy3G022940CsaV3_3G023790Cucumber (Chinese Long) v3cgybcucB117
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G022940Cucumber (Chinese Long) v3cgybcucB113
CsGy3G022940Cucumber (Chinese Long) v3cgybcucB160
CsGy3G022940Watermelon (97103) v2cgybwmbB246
CsGy3G022940Watermelon (97103) v2cgybwmbB184
CsGy3G022940Watermelon (97103) v2cgybwmbB230
CsGy3G022940Wax gourdcgybwgoB260
CsGy3G022940Wax gourdcgybwgoB309
CsGy3G022940Wax gourdcgybwgoB339
CsGy3G022940Cucumber (Gy14) v2cgybcgybB118
CsGy3G022940Cucurbita maxima (Rimu)cgybcmaB290
CsGy3G022940Cucurbita maxima (Rimu)cgybcmaB300
CsGy3G022940Cucurbita maxima (Rimu)cgybcmaB311
CsGy3G022940Cucurbita maxima (Rimu)cgybcmaB346
CsGy3G022940Cucurbita maxima (Rimu)cgybcmaB361
CsGy3G022940Cucurbita maxima (Rimu)cgybcmaB461
CsGy3G022940Cucurbita pepo (Zucchini)cgybcpeB306
CsGy3G022940Cucurbita moschata (Rifu)cgybcmoB273
CsGy3G022940Cucurbita moschata (Rifu)cgybcmoB284
CsGy3G022940Cucurbita moschata (Rifu)cgybcmoB318
CsGy3G022940Cucurbita moschata (Rifu)cgybcmoB332
CsGy3G022940Cucurbita moschata (Rifu)cgybcmoB429
CsGy3G022940Cucurbita pepo (Zucchini)cgybcpeB349
CsGy3G022940Cucurbita pepo (Zucchini)cgybcpeB360
CsGy3G022940Cucurbita pepo (Zucchini)cgybcpeB390
CsGy3G022940Cucurbita pepo (Zucchini)cgybcpeB400
CsGy3G022940Cucurbita pepo (Zucchini)cgybcpeB416
CsGy3G022940Cucumber (Chinese Long) v2cgybcuB154
CsGy3G022940Bottle gourd (USVL1VR-Ls)cgyblsiB222
CsGy3G022940Bottle gourd (USVL1VR-Ls)cgyblsiB148
CsGy3G022940Bottle gourd (USVL1VR-Ls)cgyblsiB167
CsGy3G022940Melon (DHL92) v3.5.1cgybmeB161
CsGy3G022940Melon (DHL92) v3.5.1cgybmeB186
CsGy3G022940Melon (DHL92) v3.5.1cgybmeB199
CsGy3G022940Melon (DHL92) v3.6.1cgybmedB161
CsGy3G022940Melon (DHL92) v3.6.1cgybmedB187
CsGy3G022940Melon (DHL92) v3.6.1cgybmedB200
CsGy3G022940Watermelon (Charleston Gray)cgybwcgB166
CsGy3G022940Watermelon (Charleston Gray)cgybwcgB185
CsGy3G022940Watermelon (Charleston Gray)cgybwcgB237
CsGy3G022940Watermelon (97103) v1cgybwmB174
CsGy3G022940Watermelon (97103) v1cgybwmB205
CsGy3G022940Watermelon (97103) v1cgybwmB258
CsGy3G022940Wild cucumber (PI 183967)cgybcpiB104
CsGy3G022940Wild cucumber (PI 183967)cgybcpiB110
CsGy3G022940Wild cucumber (PI 183967)cgybcpiB156
CsGy3G022940Silver-seed gourdcarcgybB0125
CsGy3G022940Silver-seed gourdcarcgybB0212
CsGy3G022940Silver-seed gourdcarcgybB0739
CsGy3G022940Silver-seed gourdcarcgybB1009