CsGy3G022450 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G022450
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	transmembrane protein
Location	Chr3 : 20909614 .. 20910985 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAATTTTCAACTTTTACGCTATTATTATTATTATTATTATTATTTATACTTCCCCTTTTCTTCCTCCTTATTAATTCAACCCTCTCTCTCTCTCATCCTTCATTCATTCTTCATATGGCCAATGAGAACTCCACCAATAATAATTCCCTTAACTATCACGGTGAAGAATCGCCGGAGGACAGTGGGTGGACCATTTACTTTGAAGATTTCCTCAACACAGACAACCCTAACTCTCATAATCAATCACTCACTTCCTTCTCAGCTTCCTCCCACTTTTCTCTTGATGTCACCGACGCTGCCTCCTCCGTCGCCCATCGTAAACTACCTCATGACCACAACGACCAAGTTTCCGAACAACCCGGGTTCGGTTACAAGGATGATGATCATATCAACTTTTTTAAGAAGAGGAAGATGATCAAAGAGTTGTTTGTTAAAGATGAAGCTTTGGAGGATACTGCTAGCTCTCCTGTTAATAGTCCCAAGGTCTCTCTCTCTCTCTCTCTCTTTAATTTCTTTATTCTATTTTTGTTGTTAATTACCATAGGAATAGAGAAGATTAAATTTATTAAACTCAGATTCCTCATTTGTTAATCAACAGATATGATTGTAACAAATGTTGTGTTACAATTCTTCTTTTCAACCTATAAAAATCAATCATTACATTGATTTTTAATTACTATATTAAAAAACAATAATAAAAGTGACTTTAACGACCGTTTTAAAATCTCTCCCATATACCGTAAATAGGATAAGATTTTCTGTTTTATTGATCCTATGATATTATTTCTTTTTCTCAAATCAATTTTAAATTCATCCAAACTCTCGACTTTCGCTTAAGTTTTTGAGTTCAATAGTATTTTAACGATGTCGGGTTTGGGCTGATATATGAGTTTTCTTTGGTCTAAATATATACAGATATCTGGTTCAACCTACTTTAGCAAGAACCAGAAGCACAGAGACAATTTAATAGCTCCTGAGGTAAATATATATAGTGGTTTTTGTTTTTAATTTTCATTTAATTTACTCAAGCAGAAGAGAGTGGAAATAAGTTTTGGAAAAATATTAAATAATGCAAGTGTTTTGTTTTGTTTTTTTTTGGTGCAGGTGGAGGAGAGAAGAGAAATGGATAATCTTATTGGAATTGGCAATGACTACACAGAACTGAAGAAAAGAGGGCTTTGCTTAGTACCTTTGTCTATGGTTCTTAATTATTTACCTCAATAACTCTCCTTTCTCTTATCTCTCTTCTTTATGTAAATATTGATCATTTGATGAAGGGTTATTGTGTATTCTATGTACAAAATGTGCATGTTGTAATATGATTGTAATCAAGTGAAGGCATTAGAAGAGAGAAAAGCATATGTATAAAT

mRNA sequence

ATTAATTTTCAACTTTTACGCTATTATTATTATTATTATTATTATTTATACTTCCCCTTTTCTTCCTCCTTATTAATTCAACCCTCTCTCTCTCTCATCCTTCATTCATTCTTCATATGGCCAATGAGAACTCCACCAATAATAATTCCCTTAACTATCACGGTGAAGAATCGCCGGAGGACAGTGGGTGGACCATTTACTTTGAAGATTTCCTCAACACAGACAACCCTAACTCTCATAATCAATCACTCACTTCCTTCTCAGCTTCCTCCCACTTTTCTCTTGATGTCACCGACGCTGCCTCCTCCGTCGCCCATCGTAAACTACCTCATGACCACAACGACCAAGTTTCCGAACAACCCGGGTTCGGTTACAAGGATGATGATCATATCAACTTTTTTAAGAAGAGGAAGATGATCAAAGAGTTGTTTGTTAAAGATGAAGCTTTGGAGGATACTGCTAGCTCTCCTGTTAATAGTCCCAAGATATCTGGTTCAACCTACTTTAGCAAGAACCAGAAGCACAGAGACAATTTAATAGCTCCTGAGGTGGAGGAGAGAAGAGAAATGGATAATCTTATTGGAATTGGCAATGACTACACAGAACTGAAGAAAAGAGGGCTTTGCTTAGTACCTTTGTCTATGGTTCTTAATTATTTACCTCAATAACTCTCCTTTCTCTTATCTCTCTTCTTTATGTAAATATTGATCATTTGATGAAGGGTTATTGTGTATTCTATGTACAAAATGTGCATGTTGTAATATGATTGTAATCAAGTGAAGGCATTAGAAGAGAGAAAAGCATATGTATAAAT

Coding sequence (CDS)

ATGGCCAATGAGAACTCCACCAATAATAATTCCCTTAACTATCACGGTGAAGAATCGCCGGAGGACAGTGGGTGGACCATTTACTTTGAAGATTTCCTCAACACAGACAACCCTAACTCTCATAATCAATCACTCACTTCCTTCTCAGCTTCCTCCCACTTTTCTCTTGATGTCACCGACGCTGCCTCCTCCGTCGCCCATCGTAAACTACCTCATGACCACAACGACCAAGTTTCCGAACAACCCGGGTTCGGTTACAAGGATGATGATCATATCAACTTTTTTAAGAAGAGGAAGATGATCAAAGAGTTGTTTGTTAAAGATGAAGCTTTGGAGGATACTGCTAGCTCTCCTGTTAATAGTCCCAAGATATCTGGTTCAACCTACTTTAGCAAGAACCAGAAGCACAGAGACAATTTAATAGCTCCTGAGGTGGAGGAGAGAAGAGAAATGGATAATCTTATTGGAATTGGCAATGACTACACAGAACTGAAGAAAAGAGGGCTTTGCTTAGTACCTTTGTCTATGGTTCTTAATTATTTACCTCAATAA

Protein sequence

MANENSTNNNSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASSHFSLDVTDAASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTASSPVNSPKISGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCLVPLSMVLNYLPQ

Homology

[Close]

BLAST of CsGy3G022450 vs. NCBI nr
Match: XP_011652800.1 (PREDICTED: uncharacterized protein LOC105435101 [Cucumis sativus])

HSP 1 Score: 350.5 bits (898), Expect = 3.4e-93
Identity = 174/177 (98.31%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MANENSTNNNSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASSHFSLDVTD 60
           MANENSTNNNSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASSHFSLDVTD
Sbjct: 1   MANENSTNNNSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASSHFSLDVTD 60

Query: 61  AASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTASSPVN 120
           AASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTASSPVN
Sbjct: 61  AASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTASSPVN 120

Query: 121 SPKISGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCLVPLSMV 178
           SPK+S STYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCLVPLSM+
Sbjct: 121 SPKVSRSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCLVPLSMI 177

[Close]

BLAST of CsGy3G022450 vs. NCBI nr
Match: XP_008454531.1 (PREDICTED: uncharacterized protein LOC103494923 [Cucumis melo])

HSP 1 Score: 309.3 bits (791), Expect = 8.7e-81
Identity = 159/183 (86.89%), Postives = 169/183 (92.35%), Query Frame = 0


Query: 1   MANENSTNNNSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASSHFSLDVTD 60
           MANENST+NNSLNYHG+ESPEDSGWTIYFEDFLN++N NSHNQSLTSFS SSHFSLDV D
Sbjct: 1   MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFS-SSHFSLDVND 60

Query: 61  AASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTASSPVN 120
           AASS+AH KLPHDHNDQV+ QP FGYKDDDHIN FKKRKMIKELFVKDEALEDTASSPVN
Sbjct: 61  AASSIAHHKLPHDHNDQVAVQPEFGYKDDDHINVFKKRKMIKELFVKDEALEDTASSPVN 120

Query: 121 SPKISGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCLVPLSMVLNY 180
           SPK+S STYFSKNQ  +DNLI PEVEER+EM +LI IGN YTELKKRGLCLVPLSMVLNY
Sbjct: 121 SPKVSCSTYFSKNQ-DKDNLIVPEVEERKEMGDLIEIGNKYTELKKRGLCLVPLSMVLNY 180

Query: 181 LPQ 184
           LPQ
Sbjct: 181 LPQ 181

[Close]

BLAST of CsGy3G022450 vs. NCBI nr
Match: XP_022937320.1 (vascular-related unknown protein 4-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 198.0 bits (502), Expect = 2.8e-47
Identity = 111/184 (60.33%), Postives = 134/184 (72.83%), Query Frame = 0


Query: 1   MANENSTNNNSLNYHGEESPEDSGWTIYFEDFLNTDNP-NSHNQSLTSFSASSHFSLDVT 60
           MA E+S  + S+ + G++S E+SGWTIYFEDFLN  +P N    S +SF  S   S  + 
Sbjct: 1   MAKESSA-HTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIA 60

Query: 61  DAASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTASSPV 120
           DAASSV   KL  +H D  +  PGF  K  DHINFFKKRKMI E+FV DEALEDTASSPV
Sbjct: 61  DAASSVVDHKLLENH-DGAAMDPGFSCK--DHINFFKKRKMIYEVFVDDEALEDTASSPV 120

Query: 121 NSPKISGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCLVPLSMVLN 180
           NSPK+  S YFSKN +H+  LI P+V ERRE+ +LIGIG++YTELKKRGLCLVP SM+LN
Sbjct: 121 NSPKVCDSNYFSKNPRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILN 180

Query: 181 YLPQ 184
           Y+ Q
Sbjct: 181 YMDQ 180

[Close]

BLAST of CsGy3G022450 vs. NCBI nr
Match: XP_022976591.1 (vascular-related unknown protein 4-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 195.3 bits (495), Expect = 1.8e-46
Identity = 113/186 (60.75%), Postives = 136/186 (73.12%), Query Frame = 0


Query: 1   MANENSTNNNSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSA---SSHFSLD 60
           MA E+S  + SL + G++S E+SGWTIYFEDFLN  +P   NQ  TSFS+   S   S  
Sbjct: 1   MAKESSA-HTSLFHGGDQSSEESGWTIYFEDFLNNHHPT--NQPPTSFSSYPPSPDQSYP 60

Query: 61  VTDAASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTASS 120
           V DAASSV   KL  +H D  +  PGF  K  DHINFFKKRKMI EL V DEALEDTASS
Sbjct: 61  VADAASSVVDHKLLGNH-DGAAMGPGFSCK--DHINFFKKRKMIYELLVDDEALEDTASS 120

Query: 121 PVNSPKISGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCLVPLSMV 180
           PVNSPK+  S YFSKN +H+  LI P+V+ERR++ +LIGIG++YTELKKRGLCLVP SM+
Sbjct: 121 PVNSPKVCDSNYFSKNPRHKGKLITPQVDERRDIGDLIGIGSEYTELKKRGLCLVPFSMI 180

Query: 181 LNYLPQ 184
           +NY+ Q
Sbjct: 181 INYMDQ 180

[Close]

BLAST of CsGy3G022450 vs. NCBI nr
Match: XP_022981625.1 (vascular-related unknown protein 4-like [Cucurbita maxima])

HSP 1 Score: 189.5 bits (480), Expect = 1.0e-44
Identity = 114/187 (60.96%), Postives = 138/187 (73.80%), Query Frame = 0


Query: 1   MANENSTNNNSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASSHFSLD--- 60
           MA ENST +NS+ + G +SPE+SGWTIYF+DFLNT+   +H+ +    S+SSH S D   
Sbjct: 1   MAKENST-SNSVCHGGNQSPEESGWTIYFQDFLNTN--TNHHPAHYPASSSSHMSPDQSY 60

Query: 61  -VTDAASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTAS 120
            V DAASS+A  KLP D ND+    P    K  DHIN FK+RKMIKEL V+DEALEDTAS
Sbjct: 61  SVADAASSIADHKLPGD-NDRAVMDPNLSCK--DHINLFKRRKMIKELLVEDEALEDTAS 120

Query: 121 SPVNSPKISGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCLVPLSM 180
           SPVNSPK+S ST+FSK+ +H +N I  +V ERREM  L+GI ++Y ELKKRGLCLVPL M
Sbjct: 121 SPVNSPKVSDSTFFSKSSRHHENQI--KVNERREM-GLVGIESEYKELKKRGLCLVPLCM 178

Query: 181 VLNYLPQ 184
           VLNYL Q
Sbjct: 181 VLNYLAQ 178

[Close]

BLAST of CsGy3G022450 vs. TAIR10
Match: AT5G54790.1 (unknown protein)

HSP 1 Score: 71.6 bits (174), Expect = 5.6e-13
Identity = 67/187 (35.83%), Postives = 95/187 (50.80%), Query Frame = 0


Query: 4   ENSTNN-------NSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASSHFSL 63
           E+S NN        +  +  +++PE+S WT+YFEDF      +S    +  FS+SS    
Sbjct: 2   ESSMNNAFIMSKHETAMFTDDQNPEESSWTMYFEDFFEA---SSSIVDVGDFSSSS---- 61

Query: 64  DVTDAASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKEL-FVKDEALEDTA 123
            V+DAAS VA +K  +     VS+Q G         N   KR   +E+ F +   LEDTA
Sbjct: 62  -VSDAASFVATKKTLN-----VSKQEG--------SNLDIKRTRNREIPFGRHHDLEDTA 121

Query: 124 SSPVNSPKI-SGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCLVPL 182
           SSP  SP + S       N +H   ++  + +    + N  G+  D   LKK+GLCLVPL
Sbjct: 122 SSPSGSPNVYSMMNLQDNNTRHGGGIVGDDEKRVSAVPNQGGLPID---LKKKGLCLVPL 164

[Close]

BLAST of CsGy3G022450 vs. TAIR10
Match: AT3G21710.2 (unknown protein)

HSP 1 Score: 59.3 bits (142), Expect = 2.9e-09
Identity = 52/198 (26.26%), Postives = 90/198 (45.45%), Query Frame = 0


Query: 15  HGEESPEDSGWTIYFEDFLN----TDNPNSHNQSLTSFSASSHFSLDVTDAAS-SVAHRK 74
           HG +  E+SGWT Y +DF N    T +  + +Q  +S+S  +  +  V+DAA+ + + + 
Sbjct: 30  HGGDHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATHAFSGKS 89

Query: 75  LPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIK---ELFVKDEALEDTASSPVNSPKISG 134
            P                    +NF  K K  +   +   +D++LEDTASSPVNSPK+S 
Sbjct: 90  FP--------------------VNFPAKLKFGRGRTKKICEDDSLEDTASSPVNSPKVSH 149

Query: 135 STYFSKNQKHRDNLIAP---------------EVEE---------RREMDNLIGIGNDYT 181
             +     +  ++ ++                +++E         R  +D          
Sbjct: 150 FEHIQTPPRKIEDYVSSSFVMGNIRGMGDHQIQIQEGGEQKVTLMRNLIDGXXXXXXXXX 207

[Close]

BLAST of CsGy3G022450 vs. TAIR10
Match: AT3G20557.1 (unknown protein)

HSP 1 Score: 44.3 bits (103), Expect = 9.5e-05
Identity = 29/70 (41.43%), Postives = 34/70 (48.57%), Query Frame = 0


Query: 112 EDTASSPVNSPKISGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCL 171
           EDTASSP N  +  G +    N      +            N I I     ELKKRGLCL
Sbjct: 62  EDTASSPSN--RTEGYSGMEDNTIEEKTMXXXXXXXXXXXXNGIKIEEYCAELKKRGLCL 121

Query: 172 VPLSMVLNYL 182
           VPLSM+ NY+
Sbjct: 122 VPLSMLSNYI 129

[Close]

BLAST of CsGy3G022450 vs. Swiss-Prot
Match: sp|Q5BPG5|VUP4_ARATH (Vascular-related unknown protein 4 OS=Arabidopsis thaliana OX=3702 GN=VUP4 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.0e-11
Identity = 67/187 (35.83%), Postives = 95/187 (50.80%), Query Frame = 0


Query: 4   ENSTNN-------NSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASSHFSL 63
           E+S NN        +  +  +++PE+S WT+YFEDF      +S    +  FS+SS    
Sbjct: 2   ESSMNNAFIMSKHETAMFTDDQNPEESSWTMYFEDFFEA---SSSIVDVGDFSSSS---- 61

Query: 64  DVTDAASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKEL-FVKDEALEDTA 123
            V+DAAS VA +K  +     VS+Q G         N   KR   +E+ F +   LEDTA
Sbjct: 62  -VSDAASFVATKKTLN-----VSKQEG--------SNLDIKRTRNREIPFGRHHDLEDTA 121

Query: 124 SSPVNSPKI-SGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCLVPL 182
           SSP  SP + S       N +H   ++  + +    + N  G+  D   LKK+GLCLVPL
Sbjct: 122 SSPSGSPNVYSMMNLQDNNTRHGGGIVGDDEKRVSAVPNQGGLPID---LKKKGLCLVPL 164

[Close]

BLAST of CsGy3G022450 vs. Swiss-Prot
Match: sp|Q9LSZ3|VUP1_ARATH (Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.1e-08
Identity = 52/198 (26.26%), Postives = 90/198 (45.45%), Query Frame = 0


Query: 15  HGEESPEDSGWTIYFEDFLN----TDNPNSHNQSLTSFSASSHFSLDVTDAAS-SVAHRK 74
           HG +  E+SGWT Y +DF N    T +  + +Q  +S+S  +  +  V+DAA+ + + + 
Sbjct: 30  HGGDHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATHAFSGKS 89

Query: 75  LPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIK---ELFVKDEALEDTASSPVNSPKISG 134
            P                    +NF  K K  +   +   +D++LEDTASSPVNSPK+S 
Sbjct: 90  FP--------------------VNFPAKLKFGRGRTKKICEDDSLEDTASSPVNSPKVSH 149

Query: 135 STYFSKNQKHRDNLIAP---------------EVEE---------RREMDNLIGIGNDYT 181
             +     +  ++ ++                +++E         R  +D          
Sbjct: 150 FEHIQTPPRKIEDYVSSSFVMGNIRGMGDHQIQIQEGGEQKVTLMRNLIDGXXXXXXXXX 207

[Close]

BLAST of CsGy3G022450 vs. TrEMBL
Match: tr|A0A1S3BZL3|A0A1S3BZL3_CUCME (uncharacterized protein LOC103494923 OS=Cucumis melo OX=3656 GN=LOC103494923 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 5.8e-81
Identity = 159/183 (86.89%), Postives = 169/183 (92.35%), Query Frame = 0


Query: 1   MANENSTNNNSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASSHFSLDVTD 60
           MANENST+NNSLNYHG+ESPEDSGWTIYFEDFLN++N NSHNQSLTSFS SSHFSLDV D
Sbjct: 1   MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFS-SSHFSLDVND 60

Query: 61  AASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTASSPVN 120
           AASS+AH KLPHDHNDQV+ QP FGYKDDDHIN FKKRKMIKELFVKDEALEDTASSPVN
Sbjct: 61  AASSIAHHKLPHDHNDQVAVQPEFGYKDDDHINVFKKRKMIKELFVKDEALEDTASSPVN 120

Query: 121 SPKISGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCLVPLSMVLNY 180
           SPK+S STYFSKNQ  +DNLI PEVEER+EM +LI IGN YTELKKRGLCLVPLSMVLNY
Sbjct: 121 SPKVSCSTYFSKNQ-DKDNLIVPEVEERKEMGDLIEIGNKYTELKKRGLCLVPLSMVLNY 180

Query: 181 LPQ 184
           LPQ
Sbjct: 181 LPQ 181

[Close]

BLAST of CsGy3G022450 vs. TrEMBL
Match: tr|F6H9B3|F6H9B3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_19s0177g00230 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.0e-17
Identity = 75/175 (42.86%), Postives = 101/175 (57.71%), Query Frame = 0


Query: 18  ESPEDSGWTIYFEDFL----NTDNPNSHNQSLTSFSASSHFSLDVTDAASSVAHRKLPHD 77
           ESPE+SGWT+YFEDFL    ++ +P++ N    S+   S  S  V+DAASS   + + +D
Sbjct: 20  ESPEESGWTMYFEDFLANKEHSSSPSAGNYGRASYGYGS--SSLVSDAASSAGKKLVDND 79

Query: 78  HNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTASSPVNSPKISGSTYFSKN 137
           H   +S +     K    ++ FKKRK   +  V D+ALEDTASSPV SPK+        N
Sbjct: 80  HVAVLSLE-----KRCKKLS-FKKRK--TKGAVVDDALEDTASSPVTSPKVFDLRQLDMN 139

Query: 138 QKHRDNLIAPE-------VEERREMDNLIGIGNDYTELKKRGLCLVPLSMVLNYL 182
            K +   I+ E         ER +    IG  +D TELKKRGLCLVPLSM+++YL
Sbjct: 140 PKEKAIDISKEKGSSYRQTNERGDEVGFIGRDSDCTELKKRGLCLVPLSMIVDYL 184

[Close]

BLAST of CsGy3G022450 vs. TrEMBL
Match: tr|U5GXN2|U5GXN2_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G419400v3 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.6e-17
Identity = 77/191 (40.31%), Postives = 103/191 (53.93%), Query Frame = 0


Query: 5   NSTNNNSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSL---TSFSASSHFSLDVTDA 64
           +S++N     H  +S E+SGWT+YFEDF   +N   HN       SFS     S  +   
Sbjct: 12  SSSSNEKTTDH--DSFEESGWTMYFEDFFAQNNEEDHNHDRYEHGSFSYDHDRSSSLVSD 71

Query: 65  ASSVAHRKLPHDH-NDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTASSPVN 124
           A+S+  +K   DH  +QV   P    +   +   FKK++    L   D+ALEDTASSPVN
Sbjct: 72  AASLVVKKSAGDHLGEQVVGLPINNNRSFKYSLSFKKKRTKGALV--DDALEDTASSPVN 131

Query: 125 SPKISGS---TYFSKNQKHRDN--LIAPEVEERREMD-----NLIGIGNDYTELKKRGLC 182
           SPK+        + +N K +DN  +   E    R++D       IG G+D T LKKRGLC
Sbjct: 132 SPKVYDDMMINQYKRNTKQKDNKEISQDEGSASRQVDKRSDFGFIGGGSDNTALKKRGLC 191

[Close]

BLAST of CsGy3G022450 vs. TrEMBL
Match: tr|A0A200R0D2|A0A200R0D2_9MAGN (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_8519g17 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.4e-17
Identity = 76/181 (41.99%), Postives = 104/181 (57.46%), Query Frame = 0


Query: 17  EESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASSHFSLDVTDAASSVA-HRKLPHDHN 76
           ++ PE+SGWT YFEDFL+ D+ N    S +S    S  S+ V+DAAS  A + K   +  
Sbjct: 27  DDFPEESGWTDYFEDFLSEDHLNREYSSNSSGFGMSSNSM-VSDAASCAAWNNKFSSNDQ 86

Query: 77  DQVSEQPGFGYKDDDHINFFKKRK-MIKELFVKDEALEDTASSPVNSPKISGSTYFSKN- 136
             V+ +   G K   +++F KKR+  +      D++LEDTASSPVNSPK+S       N 
Sbjct: 87  HNVNVRLENGCK---NLSFSKKRRSRVVVHDHHDDSLEDTASSPVNSPKVSDLRQLDMNP 146

Query: 137 -----------QKHRDNLIAPE--VEERREMDNLIGIGNDYTELKKRGLCLVPLSMVLNY 182
                      Q+ R N I  +   EER E+ + +G  N+ TELKKRGLCLVPLSM++NY
Sbjct: 147 RKKFYENIEISQEKRRNCIELQNRDEERNEILSSMGRENECTELKKRGLCLVPLSMLVNY 203

[Close]

BLAST of CsGy3G022450 vs. TrEMBL
Match: tr|A0A251SGQ7|A0A251SGQ7_HELAN (Uncharacterized protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr15g0496381 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 7.7e-17
Identity = 68/188 (36.17%), Postives = 99/188 (52.66%), Query Frame = 0


Query: 9   NNSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASSHFSLDVTDAASSVAHR 68
           N S+      S E+SGWT YFEDF+     N HNQS T      H   +++DAAS +   
Sbjct: 14  NKSIVETDTSSAEESGWTSYFEDFMVAQQQN-HNQSFTHHHDYQHNGPELSDAASHI--- 73

Query: 69  KLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTASSPVNSPKISGST 128
               + N+  S + G   K    +N F+K     +  + D++LEDTASSPVNSPK+ GS 
Sbjct: 74  ----EWNNIASSRSGAAPKFTKKLNLFRKTSRRTKDILYDDSLEDTASSPVNSPKV-GSQ 133

Query: 129 YFSKNQKHRDNLIAPEVEERREMDNLIGI---------------GNDYTELKKRGLCLVP 182
           +   NQ   D+++   + +R  +D+ + +                N  T+L+KRGLCLVP
Sbjct: 134 HMGFNQIKVDDMMENSLGKRGGLDDHLQLQKIEDQSRPMRFEESNNGDTDLRKRGLCLVP 192

The following BLAST results are available for this feature:

BLAST of CsGy3G022450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652800.1	3.4e-93	98.31	PREDICTED: uncharacterized protein LOC105435101 [Cucumis sativus]	[more]
XP_008454531.1	8.7e-81	86.89	PREDICTED: uncharacterized protein LOC103494923 [Cucumis melo]	[more]
XP_022937320.1	2.8e-47	60.33	vascular-related unknown protein 4-like isoform X1 [Cucurbita moschata]	[more]
XP_022976591.1	1.8e-46	60.75	vascular-related unknown protein 4-like isoform X1 [Cucurbita maxima]	[more]
XP_022981625.1	1.0e-44	60.96	vascular-related unknown protein 4-like [Cucurbita maxima]	[more]

BLAST of CsGy3G022450 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G54790.1	5.6e-13	35.83	unknown protein	[more]
AT3G21710.2	2.9e-09	26.26	unknown protein	[more]
AT3G20557.1	9.5e-05	41.43	unknown protein	[more]

BLAST of CsGy3G022450 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q5BPG5\|VUP4_ARATH	1.0e-11	35.83	Vascular-related unknown protein 4 OS=Arabidopsis thaliana OX=3702 GN=VUP4 PE=2 ...	[more]
sp\|Q9LSZ3\|VUP1_ARATH	5.1e-08	26.26	Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 ...	[more]

BLAST of CsGy3G022450 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BZL3\|A0A1S3BZL3_CUCME	5.8e-81	86.89	uncharacterized protein LOC103494923 OS=Cucumis melo OX=3656 GN=LOC103494923 PE=...	[more]
tr\|F6H9B3\|F6H9B3_VITVI	2.0e-17	42.86	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_19s0177g00230 PE=4 SV=...	[more]
tr\|U5GXN2\|U5GXN2_POPTR	2.6e-17	40.31	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G419400v3 PE=...	[more]
tr\|A0A200R0D2\|A0A200R0D2_9MAGN	3.4e-17	41.99	Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_8519g17 PE=4 SV=1	[more]
tr\|A0A251SGQ7\|A0A251SGQ7_HELAN	7.7e-17	36.17	Uncharacterized protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr15g0496381 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0010089	xylem development

Vocabulary: **INTERPRO**
Term	Definition
IPR039280	VUP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0010089	xylem development
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G022450.1	CsGy3G022450.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR33974:SF1	SUBFAMILY NOT NAMED	coord: 15..181
IPR039280	VASCULAR-RELATED UNKNOWN PROTEIN	PANTHER	PTHR33974	FAMILY NOT NAMED	coord: 15..181

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G022450	Cla004194	Watermelon (97103) v1	cgybwmB234
CsGy3G022450	MELO3C018090	Melon (DHL92) v3.5.1	cgybmeB175
CsGy3G022450	ClCG05G014610	Watermelon (Charleston Gray)	cgybwcgB218
CsGy3G022450	CSPI03G23440	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G022450	CmaCh09G009360	Cucurbita maxima (Rimu)	cgybcmaB286
CsGy3G022450	CmaCh01G011450	Cucurbita maxima (Rimu)	cgybcmaB370
CsGy3G022450	CmoCh01G011980	Cucurbita moschata (Rifu)	cgybcmoB341
CsGy3G022450	CmoCh09G009330	Cucurbita moschata (Rifu)	cgybcmoB259
CsGy3G022450	Lsi04G012280	Bottle gourd (USVL1VR-Ls)	cgyblsiB180
CsGy3G022450	Cp4.1LG06g09040	Cucurbita pepo (Zucchini)	cgybcpeB437
CsGy3G022450	Cp4.1LG02g01160	Cucurbita pepo (Zucchini)	cgybcpeB382
CsGy3G022450	MELO3C018090.2	Melon (DHL92) v3.6.1	cgybmedB175
CsGy3G022450	CsaV3_3G023230	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G022450	Cla97C05G095870	Watermelon (97103) v2	cgybwmbB210
CsGy3G022450	Bhi09G001621	Wax gourd	cgybwgoB336
CsGy3G022450	Carg12803	Silver-seed gourd	carcgybB0891
CsGy3G022450	Carg05642	Silver-seed gourd	carcgybB1001

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G022450	Cucumber (Chinese Long) v2	cgybcuB109