Carg05642 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05642
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	CTD small phosphatase-like protein 2, putative
Location	Cucurbita_argyrosperma_scaffold_033 : 104058 .. 104802 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAAGAAAACTCCACCAGTAACTCCGTCTGCCACGGCGGCGATCAGTCGCCGGAGGAGAGTGGCTGGACCATCTACTTCCAAGATTTCCTCAACACCAACCACCCTGCTCACTATCCTGCCTCCTCCTCTTCTCATCCGTCTCCCGATCAAAGCTACTCCGTCGCCGACGCCGCCTCCTCCATCGCCGATCACAAACTACCCGGCGACGACAACCGAGCTGCCATGGATCCCAATTTGAGCTGCAAAGATCATATCAACCTTTTCAAGAGAAGGAAGATGATCAAAGAGTTGTTGGTTGAAGATGAAGCTTTGGAGGATACAGCTAGCTCTCCGGTTAACAGTCCAAAGGTAAAATTTAAATTATGTATTAATTATAATTTTAATAGTTAAAAATATGAATAAATGATTGAATTTCACGGAACCCGAGTTTGAGTTAACAAATCTCGAGTTTTGTCTAATGGGTTTTCTTGGACGTGAAAATATGCAGGTTTCTGATGCAACTTTCTTCAGTAAGAACCCGAGACACAACGAGAACCGAATAAAGGTATGGAATTACAGGGACGAAAATAATATTTTAATTTTTAAAAAAAGAAAATGATGGAAGTGTTGTTATTTTGGGCAGGTAAATGAGAGAAGAGAAATGGGTTTAGTTGGAATTGGAAATGAGTACAAAGAGTTGAAGAAAAGAGGGCTTTGCTTGGTACCTTTGTGTATGGTAATGAATTATTTGGCTCAATAA

mRNA sequence

ATGGCCAAAGAAAACTCCACCAGTAACTCCGTCTGCCACGGCGGCGATCAGTCGCCGGAGGAGAGTGGCTGGACCATCTACTTCCAAGATTTCCTCAACACCAACCACCCTGCTCACTATCCTGCCTCCTCCTCTTCTCATCCGTCTCCCGATCAAAGCTACTCCGTCGCCGACGCCGCCTCCTCCATCGCCGATCACAAACTACCCGGCGACGACAACCGAGCTGCCATGGATCCCAATTTGAGCTGCAAAGATCATATCAACCTTTTCAAGAGAAGGAAGATGATCAAAGAGTTGTTGGTTGAAGATGAAGCTTTGGAGGATACAGCTAGCTCTCCGGTTAACAGTCCAAAGGTTTCTGATGCAACTTTCTTCAGTAAGAACCCGAGACACAACGAGAACCGAATAAAGGTAAATGAGAGAAGAGAAATGGGTTTAGTTGGAATTGGAAATGAGTACAAAGAGTTGAAGAAAAGAGGGCTTTGCTTGGTACCTTTGTGTATGGTAATGAATTATTTGGCTCAATAA

Coding sequence (CDS)

ATGGCCAAAGAAAACTCCACCAGTAACTCCGTCTGCCACGGCGGCGATCAGTCGCCGGAGGAGAGTGGCTGGACCATCTACTTCCAAGATTTCCTCAACACCAACCACCCTGCTCACTATCCTGCCTCCTCCTCTTCTCATCCGTCTCCCGATCAAAGCTACTCCGTCGCCGACGCCGCCTCCTCCATCGCCGATCACAAACTACCCGGCGACGACAACCGAGCTGCCATGGATCCCAATTTGAGCTGCAAAGATCATATCAACCTTTTCAAGAGAAGGAAGATGATCAAAGAGTTGTTGGTTGAAGATGAAGCTTTGGAGGATACAGCTAGCTCTCCGGTTAACAGTCCAAAGGTTTCTGATGCAACTTTCTTCAGTAAGAACCCGAGACACAACGAGAACCGAATAAAGGTAAATGAGAGAAGAGAAATGGGTTTAGTTGGAATTGGAAATGAGTACAAAGAGTTGAAGAAAAGAGGGCTTTGCTTGGTACCTTTGTGTATGGTAATGAATTATTTGGCTCAATAA

Protein sequence

MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPDQSYSVADAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELLVEDEALEDTASSPVNSPKVSDATFFSKNPRHNENRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ

Homology

[Close]

BLAST of Carg05642 vs. NCBI nr
Match: XP_022941072.1 (vascular-related unknown protein 4-like [Cucurbita moschata])

HSP 1 Score: 273.9 bits (699), Expect = 3.9e-70
Identity = 172/175 (98.29%), Postives = 173/175 (98.86%), Query Frame = 0


Query: 1   MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSXXXXXXXXXXXXXX 60
           MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSXXXXXXXXXXXXXX
Sbjct: 1   MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXPNLSCKDHINLFKRRKMIKELLVEDEALEDTASSPVNSPKVS 120
           XXXXXXXXXXXXXXXXXXPNLSCKDHINLFKRRKMIKELLVEDEALEDTASSPVNSPKVS
Sbjct: 61  XXXXXXXXXXXXXXXXXXPNLSCKDHINLFKRRKMIKELLVEDEALEDTASSPVNSPKVS 120

Query: 121 DATFFSKNPRHNENRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ 176
           DATFFSKN  HNEN+IKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ
Sbjct: 121 DATFFSKNSGHNENQIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ 175

[Close]

BLAST of Carg05642 vs. NCBI nr
Match: XP_023525426.1 (vascular-related unknown protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265.0 bits (676), Expect = 1.8e-67
Identity = 167/175 (95.43%), Postives = 169/175 (96.57%), Query Frame = 0


Query: 1   MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSXXXXXXXXXXXXXX 60
           MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHP HYPASSSSXXXXXXXXXXXXXX
Sbjct: 1   MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPTHYPASSSSXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXPNLSCKDHINLFKRRKMIKELLVEDEALEDTASSPVNSPKVS 120
           XXXXXXXXXXXXXXXXXX   SCKDHINLFKRRKMIKELLVEDEALEDTASSPVNSPKVS
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXSCKDHINLFKRRKMIKELLVEDEALEDTASSPVNSPKVS 120

Query: 121 DATFFSKNPRHNENRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ 176
           D  FFSKNPR+NENRIKVNERREMGLVGIGNEYKELK+RGLCLVPLCMVMNYLAQ
Sbjct: 121 DTNFFSKNPRYNENRIKVNERREMGLVGIGNEYKELKRRGLCLVPLCMVMNYLAQ 175

[Close]

BLAST of Carg05642 vs. NCBI nr
Match: XP_022981625.1 (vascular-related unknown protein 4-like [Cucurbita maxima])

HSP 1 Score: 258.1 bits (658), Expect = 2.2e-65
Identity = 134/178 (75.28%), Postives = 141/178 (79.21%), Query Frame = 0


Query: 1   MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTN---HPAHYPASSSSXXXXXXXXXXX 60
           MAKENSTSNSVCHGG+QSPEESGWTIYFQDFLNTN   HPAHYPASSSS           
Sbjct: 1   MAKENSTSNSVCHGGNQSPEESGWTIYFQDFLNTNTNHHPAHYPASSSSHMSPDQSYSVA 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXPNLSCKDHINLFKRRKMIKELLVEDEALEDTASSPVNSP 120
                                PNLSCKDHINLFKRRKMIKELLVEDEALEDTASSPVNSP
Sbjct: 61  DAASSIADHKLPGDNDRAVMDPNLSCKDHINLFKRRKMIKELLVEDEALEDTASSPVNSP 120

Query: 121 KVSDATFFSKNPRHNENRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYLAQ 176
           KVSD+TFFSK+ RH+EN+IKVNERREMGLVGI +EYKELKKRGLCLVPLCMV+NYLAQ
Sbjct: 121 KVSDSTFFSKSSRHHENQIKVNERREMGLVGIESEYKELKKRGLCLVPLCMVLNYLAQ 178

[Close]

BLAST of Carg05642 vs. NCBI nr
Match: XP_022937320.1 (vascular-related unknown protein 4-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 188.7 bits (478), Expect = 1.6e-44
Identity = 101/180 (56.11%), Postives = 119/180 (66.11%), Query Frame = 0


Query: 1   MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPAS--SSSXXXXXXXXXXXX 60
           MAKE+S   SVCHGGDQS EESGWTIYF+DFLN +HP + P +  SS             
Sbjct: 1   MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIAD 60

Query: 61  XXXXXXXXXXXXXXXXXXXXPNLSCKDHINLFKRRKMIKELLVEDEALEDTASSPVNSPK 120
                               P  SCKDHIN FK+RKMI E+ V+DEALEDTASSPVNSPK
Sbjct: 61  AASSVVDHKLLENHDGAAMDPGFSCKDHINFFKKRKMIYEVFVDDEALEDTASSPVNSPK 120

Query: 121 VSDATFFSKNPRHNENRI--KVNERREMG-LVGIGNEYKELKKRGLCLVPLCMVMNYLAQ 176
           V D+ +FSKNPRH    I  +V+ERRE+G L+GIG+EY ELKKRGLCLVP  M++NY+ Q
Sbjct: 121 VCDSNYFSKNPRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ 180

[Close]

BLAST of Carg05642 vs. NCBI nr
Match: XP_022976591.1 (vascular-related unknown protein 4-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 184.5 bits (467), Expect = 3.1e-43
Identity = 100/180 (55.56%), Postives = 119/180 (66.11%), Query Frame = 0


Query: 1   MAKENSTSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPAS--SSSXXXXXXXXXXXX 60
           MAKE+S   S+ HGGDQS EESGWTIYF+DFLN +HP + P +  SS             
Sbjct: 1   MAKESSAHTSLFHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSYPPSPDQSYPVAD 60

Query: 61  XXXXXXXXXXXXXXXXXXXXPNLSCKDHINLFKRRKMIKELLVEDEALEDTASSPVNSPK 120
                               P  SCKDHIN FK+RKMI ELLV+DEALEDTASSPVNSPK
Sbjct: 61  AASSVVDHKLLGNHDGAAMGPGFSCKDHINFFKKRKMIYELLVDDEALEDTASSPVNSPK 120

Query: 121 VSDATFFSKNPRHNENRI--KVNERREMG-LVGIGNEYKELKKRGLCLVPLCMVMNYLAQ 176
           V D+ +FSKNPRH    I  +V+ERR++G L+GIG+EY ELKKRGLCLVP  M++NY+ Q
Sbjct: 121 VCDSNYFSKNPRHKGKLITPQVDERRDIGDLIGIGSEYTELKKRGLCLVPFSMIINYMDQ 180

[Close]

BLAST of Carg05642 vs. TAIR10
Match: AT5G54790.1 (unknown protein)

HSP 1 Score: 63.2 bits (152), Expect = 1.9e-10
Identity = 54/160 (33.75%), Postives = 71/160 (44.38%), Query Frame = 0


Query: 16  DQSPEESGWTIYFQDFLNTNHPAHYPASSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 75
           DQ+PEES WT+YF+DF        + ASSS                              
Sbjct: 22  DQNPEESSWTMYFEDF--------FEASSSIVDVGDFSSSSVSDAASFVATKKTL----- 81

Query: 76  XXXPNLSCKDHINLFKRRKMIKEL-LVEDEALEDTASSPVNSPKV-SDATFFSKNPRHNE 135
               N+S ++  NL  +R   +E+       LEDTASSP  SP V S       N RH  
Sbjct: 82  ----NVSKQEGSNLDIKRTRNREIPFGRHHDLEDTASSPSGSPNVYSMMNLQDNNTRHGG 141

Query: 136 NRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYL 174
             +  +E+R   +   G    +LKK+GLCLVPL MV N+L
Sbjct: 142 GIVGDDEKRVSAVPNQGGLPIDLKKKGLCLVPLSMVTNFL 164

[Close]

BLAST of Carg05642 vs. TAIR10
Match: AT3G21710.2 (unknown protein)

HSP 1 Score: 55.5 bits (132), Expect = 3.9e-08
Identity = 53/187 (28.34%), Postives = 70/187 (37.43%), Query Frame = 0


Query: 13  HGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSXXXXXXXXXXXXXXXXXXXXXXXXXX 72
           HGGD   EESGWT Y  DF N     H+  +                             
Sbjct: 30  HGGDHQ-EESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATHAFSGK 89

Query: 73  XXXXXXPNLSCKDHINLFKRRKMIKELLVEDEALEDTASSPVNSPKVSDATFFSKNPRHN 132
                  N   K      + +K     + ED++LEDTASSPVNSPKVS        PR  
Sbjct: 90  SFPV---NFPAKLKFGRGRTKK-----ICEDDSLEDTASSPVNSPKVSHFEHIQTPPRKI 149

Query: 133 ENRIK----VNERREMG----LVGIGNEYK-------------------ELKKRGLCLVP 173
           E+ +     +   R MG     +  G E K                   +L+ RGLC+VP
Sbjct: 150 EDYVSSSFVMGNIRGMGDHQIQIQEGGEQKVTLMRNLIDGXXXXXXXXXDLRSRGLCVVP 207

[Close]

BLAST of Carg05642 vs. Swiss-Prot
Match: sp|Q5BPG5|VUP4_ARATH (Vascular-related unknown protein 4 OS=Arabidopsis thaliana OX=3702 GN=VUP4 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.4e-09
Identity = 54/160 (33.75%), Postives = 71/160 (44.38%), Query Frame = 0


Query: 16  DQSPEESGWTIYFQDFLNTNHPAHYPASSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 75
           DQ+PEES WT+YF+DF        + ASSS                              
Sbjct: 22  DQNPEESSWTMYFEDF--------FEASSSIVDVGDFSSSSVSDAASFVATKKTL----- 81

Query: 76  XXXPNLSCKDHINLFKRRKMIKEL-LVEDEALEDTASSPVNSPKV-SDATFFSKNPRHNE 135
               N+S ++  NL  +R   +E+       LEDTASSP  SP V S       N RH  
Sbjct: 82  ----NVSKQEGSNLDIKRTRNREIPFGRHHDLEDTASSPSGSPNVYSMMNLQDNNTRHGG 141

Query: 136 NRIKVNERREMGLVGIGNEYKELKKRGLCLVPLCMVMNYL 174
             +  +E+R   +   G    +LKK+GLCLVPL MV N+L
Sbjct: 142 GIVGDDEKRVSAVPNQGGLPIDLKKKGLCLVPLSMVTNFL 164

[Close]

BLAST of Carg05642 vs. Swiss-Prot
Match: sp|Q9LSZ3|VUP1_ARATH (Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 7.1e-07
Identity = 53/187 (28.34%), Postives = 70/187 (37.43%), Query Frame = 0


Query: 13  HGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSXXXXXXXXXXXXXXXXXXXXXXXXXX 72
           HGGD   EESGWT Y  DF N     H+  +                             
Sbjct: 30  HGGDHQ-EESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATHAFSGK 89

Query: 73  XXXXXXPNLSCKDHINLFKRRKMIKELLVEDEALEDTASSPVNSPKVSDATFFSKNPRHN 132
                  N   K      + +K     + ED++LEDTASSPVNSPKVS        PR  
Sbjct: 90  SFPV---NFPAKLKFGRGRTKK-----ICEDDSLEDTASSPVNSPKVSHFEHIQTPPRKI 149

Query: 133 ENRIK----VNERREMG----LVGIGNEYK-------------------ELKKRGLCLVP 173
           E+ +     +   R MG     +  G E K                   +L+ RGLC+VP
Sbjct: 150 EDYVSSSFVMGNIRGMGDHQIQIQEGGEQKVTLMRNLIDGXXXXXXXXXDLRSRGLCVVP 207

[Close]

BLAST of Carg05642 vs. TrEMBL
Match: tr|A0A1S3BZL3|A0A1S3BZL3_CUCME (uncharacterized protein LOC103494923 OS=Cucumis melo OX=3656 GN=LOC103494923 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 9.2e-36
Identity = 97/182 (53.30%), Postives = 120/182 (65.93%), Query Frame = 0


Query: 1   MAKENST-SNSVCHGGDQSPEESGWTIYFQDFLNTNHP-AHYPASSSSXXXXXXXXXXXX 60
           MA ENST +NS+ + GD+SPE+SGWTIYF+DFLN+N+  +H  + +S             
Sbjct: 1   MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFSSSHFSLDVNDA 60

Query: 61  XXXXXXXXXXXXXXXXXXXXPNLSCK--DHINLFKRRKMIKELLVEDEALEDTASSPVNS 120
                               P    K  DHIN+FK+RKMIKEL V+DEALEDTASSPVNS
Sbjct: 61  ASSIAHHKLPHDHNDQVAVQPEFGYKDDDHINVFKKRKMIKELFVKDEALEDTASSPVNS 120

Query: 121 PKVSDATFFSKNPRHNENRI--KVNERREMG-LVGIGNEYKELKKRGLCLVPLCMVMNYL 176
           PKVS +T+FSKN +  +N I  +V ER+EMG L+ IGN+Y ELKKRGLCLVPL MV+NYL
Sbjct: 121 PKVSCSTYFSKN-QDKDNLIVPEVEERKEMGDLIEIGNKYTELKKRGLCLVPLSMVLNYL 180

[Close]

BLAST of Carg05642 vs. TrEMBL
Match: tr|A0A200R0D2|A0A200R0D2_9MAGN (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_8519g17 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.0e-14
Identity = 67/179 (37.43%), Postives = 82/179 (45.81%), Query Frame = 0


Query: 14  GGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSXXXXXXXXXXXXXXXXXXXXXXXXXXX 73
           G D  PEESGWT YF+DFL+ +H     +S+SS                           
Sbjct: 25  GDDDFPEESGWTDYFEDFLSEDHLNREYSSNSSGFGMSSNSMVSDAASCAAWNNKFSSND 84

Query: 74  XXXXXPNL--SCKDHINLFKRRKMIKELLVEDEALEDTASSPVNSPKVSDATFFSKNPR- 133
                  L   CK+     KRR  +      D++LEDTASSPVNSPKVSD      NPR 
Sbjct: 85  QHNVNVRLENGCKNLSFSKKRRSRVVVHDHHDDSLEDTASSPVNSPKVSDLRQLDMNPRK 144

Query: 134 -----------HNENRIKVNERRE-----MGLVGIGNEYKELKKRGLCLVPLCMVMNYL 174
                         N I++  R E     +  +G  NE  ELKKRGLCLVPL M++NYL
Sbjct: 145 KFYENIEISQEKRRNCIELQNRDEERNEILSSMGRENECTELKKRGLCLVPLSMLVNYL 203

[Close]

BLAST of Carg05642 vs. TrEMBL
Match: tr|F6H9B3|F6H9B3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_19s0177g00230 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.9e-13
Identity = 60/168 (35.71%), Postives = 82/168 (48.81%), Query Frame = 0


Query: 16  DQSPEESGWTIYFQDFLNTNHPAHYPASSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 75
           ++SPEESGWT+YF+DFL     +  P++ +                              
Sbjct: 19  NESPEESGWTMYFEDFLANKEHSSSPSAGNYGRASYGYGSSSLVSDAASSAGKKLVDNDH 78

Query: 76  XXXPNLSCKDHINLFKRRKMIKELLVEDEALEDTASSPVNSPKVSDATFFSKNPRHNENR 135
               +L  +     FK+RK   +  V D+ALEDTASSPV SPKV D      NP+     
Sbjct: 79  VAVLSLEKRCKKLSFKKRK--TKGAVVDDALEDTASSPVTSPKVFDLRQLDMNPKEKAID 138

Query: 136 I---------KVNER-REMGLVGIGNEYKELKKRGLCLVPLCMVMNYL 174
           I         + NER  E+G +G  ++  ELKKRGLCLVPL M+++YL
Sbjct: 139 ISKEKGSSYRQTNERGDEVGFIGRDSDCTELKKRGLCLVPLSMIVDYL 184

[Close]

BLAST of Carg05642 vs. TrEMBL
Match: tr|A0A2R6QWY3|A0A2R6QWY3_ACTCH (Lysine-specific demethylase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc13763 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 3.2e-12
Identity = 63/181 (34.81%), Postives = 84/181 (46.41%), Query Frame = 0


Query: 7   TSNSVCHGGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSXXXXXXXXXXXXXXXXXXXX 66
           T+NS  H      EES WT YF+DFL  N  + +P+   S                    
Sbjct: 17  TANSDDH------EESSWTFYFEDFLCENEQSCFPSGYESPSLVSDAASMVAKKLMDDDD 76

Query: 67  XXXXXXXXXXXXPNLSCKDHINL-FKRRKMIKELLVEDEALEDTASSPVNSPKVSDATFF 126
                            K   NL FK+RK    L+  D ALEDTASSPVNSPKV      
Sbjct: 77  EVAVISL---------AKTRNNLSFKKRKTKGALVDLDHALEDTASSPVNSPKVCYLNQL 136

Query: 127 SKNPRHNENRIKVNERR-------------EMGLVGIGNEYKELKKRGLCLVPLCMVMNY 174
           + N +  +N + ++E +             E+G+VG  +++ ELKKRGLCLVP+ M+ NY
Sbjct: 137 AMNRKEKDN-MDISEEKGNTSGQTFERSSSELGMVGRDSDHTELKKRGLCLVPISMLANY 181

[Close]

BLAST of Carg05642 vs. TrEMBL
Match: tr|A0A061F6J6|A0A061F6J6_THECC (CTD small phosphatase-like protein 2, putative OS=Theobroma cacao OX=3641 GN=TCM_030992 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 7.1e-12
Identity = 68/183 (37.16%), Postives = 84/183 (45.90%), Query Frame = 0


Query: 5   NSTSNS-VCHG-GDQSPEESGWTIYFQDFLNTNHPAHYPASSSSXXXXXXXXXXXXXXXX 64
           NS S S V HG  D+ PEES WT+YF+   N N       SS S                
Sbjct: 6   NSMSRSPVSHGEADEYPEESSWTMYFESLSNKNSDMDVENSSFSSDINYQSSSLVSDAAC 65

Query: 65  XXXXXXXXXXXXXXXXPNLSCKDHINLFKRRKMIKELLVEDEALEDTASSPVNSPKVSD- 124
                             LS       FK+RK  K  LV+D+ LEDTASSP NSPKV + 
Sbjct: 66  SAAGRHDFGAPLGKSCNRLS-------FKKRKCNKGRLVDDD-LEDTASSPANSPKVCNL 125

Query: 125 ATFFSKNPRHNENRIKVNER-----------REMGLVGIGNEYKELKKRGLCLVPLCMVM 174
              F KN +  +   K  E+            E+GL+G  ++  ELKK GLCLVPL MV+
Sbjct: 126 INHFDKNLKQKDVMDKSQEKGSASGQIDERNDELGLIGREDDGTELKKMGLCLVPLSMVV 180

The following BLAST results are available for this feature:

BLAST of Carg05642 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941072.1	3.9e-70	98.29	vascular-related unknown protein 4-like [Cucurbita moschata]	[more]
XP_023525426.1	1.8e-67	95.43	vascular-related unknown protein 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022981625.1	2.2e-65	75.28	vascular-related unknown protein 4-like [Cucurbita maxima]	[more]
XP_022937320.1	1.6e-44	56.11	vascular-related unknown protein 4-like isoform X1 [Cucurbita moschata]	[more]
XP_022976591.1	3.1e-43	55.56	vascular-related unknown protein 4-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg05642 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G54790.1	1.9e-10	33.75	unknown protein	[more]
AT3G21710.2	3.9e-08	28.34	unknown protein	[more]

BLAST of Carg05642 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q5BPG5\|VUP4_ARATH	3.4e-09	33.75	Vascular-related unknown protein 4 OS=Arabidopsis thaliana OX=3702 GN=VUP4 PE=2 ...	[more]
sp\|Q9LSZ3\|VUP1_ARATH	7.1e-07	28.34	Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 ...	[more]

BLAST of Carg05642 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BZL3\|A0A1S3BZL3_CUCME	9.2e-36	53.30	uncharacterized protein LOC103494923 OS=Cucumis melo OX=3656 GN=LOC103494923 PE=...	[more]
tr\|A0A200R0D2\|A0A200R0D2_9MAGN	2.0e-14	37.43	Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_8519g17 PE=4 SV=1	[more]
tr\|F6H9B3\|F6H9B3_VITVI	2.9e-13	35.71	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_19s0177g00230 PE=4 SV=...	[more]
tr\|A0A2R6QWY3\|A0A2R6QWY3_ACTCH	3.2e-12	34.81	Lysine-specific demethylase OS=Actinidia chinensis var. chinensis OX=1590841 GN=...	[more]
tr\|A0A061F6J6\|A0A061F6J6_THECC	7.1e-12	37.16	CTD small phosphatase-like protein 2, putative OS=Theobroma cacao OX=3641 GN=TCM...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0010089	xylem development

Vocabulary: **INTERPRO**
Term	Definition
IPR039280	VUP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010089	xylem development
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05642-RA	Carg05642-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..58
None	No IPR available	PANTHER	PTHR33974:SF1	SUBFAMILY NOT NAMED	coord: 8..173
IPR039280	VASCULAR-RELATED UNKNOWN PROTEIN	PANTHER	PTHR33974	FAMILY NOT NAMED	coord: 8..173

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05642	Cla004194	Watermelon (97103) v1	carwmB1020
Carg05642	MELO3C018090	Melon (DHL92) v3.5.1	carmeB0990
Carg05642	ClCG05G014610	Watermelon (Charleston Gray)	carwcgB0998
Carg05642	CSPI03G23440	Wild cucumber (PI 183967)	carcpiB1053
Carg05642	CmaCh01G011450	Cucurbita maxima (Rimu)	carcmaB1410
Carg05642	CmaCh09G009360	Cucurbita maxima (Rimu)	carcmaB1407
Carg05642	CmoCh09G009330	Cucurbita moschata (Rifu)	carcmoB1364
Carg05642	CmoCh01G011980	Cucurbita moschata (Rifu)	carcmoB1367
Carg05642	Lsi04G012280	Bottle gourd (USVL1VR-Ls)	carlsiB933
Carg05642	Cp4.1LG06g09040	Cucurbita pepo (Zucchini)	carcpeB1422
Carg05642	Cp4.1LG02g01160	Cucurbita pepo (Zucchini)	carcpeB1420
Carg05642	CsGy3G022450	Cucumber (Gy14) v2	carcgybB1001
Carg05642	MELO3C018090.2	Melon (DHL92) v3.6.1	carmedB1001
Carg05642	CsaV3_3G023230	Cucumber (Chinese Long) v3	carcucB1059
Carg05642	Cla97C05G095870	Watermelon (97103) v2	carwmbB1083
Carg05642	Bhi09G001621	Wax gourd	carwgoB1199

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg05642	Carg12803	Silver-seed gourd	carcarB641

The following block(s) are covering this gene:


Gene	Organism	Block
Carg05642	Cucumber (Chinese Long) v2	carcuB1029
Carg05642	Melon (DHL92) v3.6.1	carmedB1000
Carg05642	Watermelon (97103) v2	carwmbB1075
Carg05642	Watermelon (97103) v2	carwmbB1082
Carg05642	Cucumber (Gy14) v1	carcgyB1137