CsGy3G022120 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G022120
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X2
Location	Chr3 : 20524647 .. 20539169 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTTCCAAACTAAGCTCACTAGTCCGCTCCGCCATCATATCTTCAAAATCTTCACAGAATGCCCAAGATGCCGCTCTTCAAAACTACGTTTCCACTATTGATCCTTTATCTCCCAGCACCTCTCTCTCTAACGCCATCAACTCCCCGACCTCCAAGAAGCTTCCTCAGAACCCCAATTCTGACGTTCAATTTCCTGCTCTCATTCTAGAAGAGTCTTCGGATTCTGGTACGTGTATTGCATTTTATTACTTTGGTTATGTTTACATCATGTTTTTGTTATTTTGGTTAATGTGTCTATAGTTAATCTTCAATCCAGCTTAATTTTGCCGTAGGCTTCGTGGTTTAGTGTTTTGTTGAAGCTGAAAAGAAGTTTTATTTTAATTATATTTCATTTGCATTGAAGGGCATGTGAATGACATTTGATTTGTCTTGTTTTACTTATCCCAAAAGTTCATGTTTTAATGCAGGGGATCCTACGAAGCATCTAGCCAAGGCCATATCTTCCGTTCTGTGCGGTACGTGTCATTGAATGTTTGTTGTAGGAATTCAATCTCAATTTGTTTTAGATTTATTATAACTCATTAGTTACAATTTCCTTCTTTAAGTTGTTAATAACCTAATAAGCATATGGTAAATATTGAAGGTCAACGGCTAAAATATCTAATGAGTTTCTTTGGCTACTAAACGTAGGGTCAGGCAATTGTCCAATCCTCGAAGGTTTGGTCCAGCTCACGTATTAAAAAAAACATGTAGTGCCTTAGAAATTTTAGAGTGTATTCCTCTTGATGTATCTTTCAGCATTAGTCTCTTTTCATTTTACTAGTTTTCTTTAAAAAAAATAGCCACCTTTTGGATCTTACGTTTCAGATTTTTATGTTGTCTATTTCATCATACTGAGAATGAAGGGATGTGAGTAATCGAATTAATTTCCTGTCCAGTTATACAAGCTGATTAAATAAATTCTTATGTAGTAATACGTTCTATAAATTATAATAATTTTGATGATCAAACTGTAAACTAAAAATTTGGTTTCTTACATGGGCAGGTTTCACCATCCTAAACAGGTTTTAAAGTTGCATTTACTATTTATAATTATTTGATTTGTAATTTTCATAGACATTATTTCATATGTTATCGTCTTGTTTTGCCTCCAATTATGAATCTATCTTAATGCAGTTCTCAGTTTTTCTGTTTTCTCCAAGTGAACTGCTTTAGTAACGTATTATTTCCTTTTGCAGAAGGCTCATCTGTTATGTCTCCTGAAGCACAAGGAAATTGTGTTGAAGAATCTTTGGAAAAATTATTAGATATACCATGGTTTTCCATCAAAACAAATCATAGCTTAACATTACATCGCAAAGAAATATCCCGGGAAAGAAAGCATAACTGGGTATTAAAAAATACCCAGAGCGATAGATTTAGACGATTAGTTAGAAGTTGCGCAAACAGGCTGGGGAGTGATGTTACTCTAGAAGTCTTTGGTAAATTGGGACGAGAAACTGGTGTGAAAGAATACAATGCACTAGTAGGCATATGTTTAGAGAAGGCTAAGGCAAGTAAGGACGTGGAGGTTGTATTGGAACAGATTGGGAAGGTTTATCAGCTATTTAAACTAATGAAAGAACAGGGTTTCTCATTAGAAGATGAAACTTATGGCCCAGTGCTTGCGTGTTTAATTGACATGGACATGATGGAAGAATTTAATTTTTTCTGTGAGGCTATAAAAGATGGAAATCCAGGCTCAATATCAAGGTTGGGTTACTATAAGATGTTGTTCTATATTAAAATCAATGATGAAGAAAAAGTTCAGGAGCTTTGTTACCGTGCTACAGTTGATGATGGAGTGGACAAGTTCAGTTTACAAGGTACGGCCAACTGTTTATGGATACACAAACCTCAGCTGCACCTTTTGTCTTCTTGCTCTGAAATAAACAATGGGGAAGTTTTGCTTATCGGGAAACTCTATTTTTGTTTAAGATAATTGTTAAATTGGCGCCAAACCTAGAAGTTTAAGCTGATGGGTTTGGGTAAAGTTAATTATAATTTATACAAATACTTTTAACCATAAGAAATAACCTGTTGATAAAAGCATGAATAACAAGGGATCTTTTTTTGGCTGAGAAATTAGTAGAAAGCTCTCAATCAGCTATAGTAAATAACAACAAGAAATAACTAAATGTCTTGGTTGCAGCCTAAAAGAAATGCATATAGTCAGGTGGCGAGTCTTTGATGTAACATGTACTATGTTTGAGACTTAAGGCTGACGAGTATTATGTATTTTAAGCTTCTCTGATTTGTAGGTCCCGTTTGGTAAGCATTTCATTTTTGTTTTTGGTTTTTGAAAGTTAAGCCTATTTCCTTTCATTTTATTACCATGACATTAATACGTAAGAGTTGCATTTATAGTTAGACTCTAAAAACAAAAATGAGGTTTTTAAAAACTGTTTTATTATTATTATTTTTAATTTTCAAACTTCGATTTTGTTTTTAAAAAAAGGGTAAAAAGTAGATATATCAAAACAACAAATTTAGAGGTGGAAGAGGTGTTTATAGGCTTAATTTGCAAAAATCAAAACAAAAAATGAAATGGTTACCAAAAGGGACCTTAGTATTTATTGTTTTTACGACAAGTTATTTTTTCAAGTTGTTTTTGCAGCAAGTTAAATTTTCAAGTTTGGTTTAGTTACTCCTTAGTTCATTATTTTAAGTTATTCTTTTAAATCTCTCAAAGGCTGGTTTGTAGCCTTGAAATAGGGATCCCCAGGCTGTAAGAGGCATTAGTTCTAAGCGAGTTCTTCAAGAATTCTCTAGATTTTGTTCAAGAAATTAGTTCTACACCAGACTCTCTCCCACCTCTTTCTATACCCTGGAATATTTTAGCTTTCCTTTTGAGAATAGGGTCAGCAATGATATAGGACAATTCTTGGAAATTATATTGAGGTTTAGAGTTCAATTTTGAAGTTGTGATAATTTTAAGGCTTTAGGGACAATCAAACTTGAAGTTGAATTCTTATTTAGCGTTTGCAATGAAAAATAACAAGCTATGTGAAAGAAATTTATAATAGAAGGAACCTATAATAAATAACACCTTTGGCATCCTCCTTGGGCAGCCCATAAAAATTCTTTGAAGTGATTAGAACAGTGTTTTCTCTGTTTAACTATTTCTGGAAAAAGGTTGTAGCTATTGTTTTAAAGATAATGCAGAGTTTAGCACATTTATCAACTGGGTACATACCAAAGGGAATATGACCGAGTTTCCCACTTTCCCACCCTTCGTTACCTGTACGGATAAAATGATAATCTCTCTAGATACTTTTACATATTATATAGTAGCACACACTACTTCTATCCACTCCTTCATCAGGTCAGTTAGTCTTACCAGTCATGATGGATATGATCTTCTACAGGAGTTCAGTAGGTTGTCATGGTTGTTTCATATGATTTCAGTACTTTCTTACACATTAAATAAGAACACACCCACACCCACACCTACACCCACACCCACACACAACTTCTATCTAATCCACTCATTCATCAGATCGGTTAGTCTTATTGGTCATGATGGATATGACCTTCTACATGAGTTCAGTAGGTTATGGATGTCCCATATGGCATAAGCAATTATAAAATTGAAATTTACATTCACAAACTTTTTTTATCAGCTATGTTCATGTTTTTGGTGAGGCATATATCTTACGATGAAATGGATACATTTCAGAGATAAACCTGTTTGGTTAAAAATTTGGAACCTTTGGTTACAGAAAATTATTTGTTGGCACTCTGTGGAAGTGAGCAGAAGAAGGAACTTTTACAGATGCTGGAAGTTATAGACATCACAAAACTTTCGACAACTGTAGTTGCACCTAACATCTTCAAATCCTTAGGGAGGCTATCACTTCACACTTTTGCAGAGAAGTCACTTTTGGCGTTTAAAACTTCTGGTACGTTGATGATTGCCTTAAAATTTTATTGACAATGAATTTGAAGCAGTCATTTCTTTGTTTTGGAGTGTATATTGAATAAAGTCAGATGCATTGATATAGAAATGTTTAGAATTAGTGGACTTGACCCTTAGGGTATTTATGGAAAGATTATGGAAATATTTACCCTAATTCCTAAATCTTTTCATTTTTTATTCCCTTATGTATTACATTTATTCTCCCTCATTATAACTATCGTATAATTCAATTTAGAAAATAATAAAAGAACAACAATATCGTGGTTTTTCTCCCGGTACTCGGGTTTCCACGTAAGTCTTGGTTTCATGTTTATTGCTTTCAATATGGTATTAGAGCAAAGCAACAACAAAACCTTAGAAAACATTTTAGGAGGAGCCTAGACCAAACCAGCCGCTGCCGCCGCCACCATGGACGCCGTCATGAAAAAATTAGTCCTACAACTTCAGGAATCGTCGATCTACACAGTGGGACCACCCTCGTCGCCGTCCGTGCAACCCTCCGGCCAGAATCTCTTTCACTCGCTGCCATCTGTTTGCCTCACCGCCAACCCAATCTCTTCTACTCACTATCGGTTGTCCAACAGTCATACCCTTCTGGACAGTCGCAGCCCCACACACTGCCCATGCTCTCCGATTATGGACAGCCACCACAAAAACTGTCAGATTTGTTCGTTTGCGCGCTGCTATCCGTCGACCCTTATTTATAGTAACGAGATTGATGGTAGATCAAGGGTTGAAGCGGGTGAGTCTTCGGCACATTCCAAACCAACCGAGTTGTCGATGTATTCCAAGAACCCAGTAATTTCGCTCCTCAATTTGCCTTTGAATTATATAACTGACTTTGCTGCTGCCTTTAGTGCTCGATCCTTGACCCATGATAATGAAAAGAATAGTGGAAAACCAATCCTTGTAGCTAGCACTGCAAGAAACAATGGCACACCAAGGATCAGTGTTGGAAACTCCACGATTGTTCCCCACGATGGAAGAAACGTTCCTACAATGACAAACTGAACTTAGAACGTGCCTATGTTAGTGAGATTGCTAACACCTCTTAGTTAATTGGCCCCACTGCAAGCTAAACCAGCTTTCCTACTCTGGGCGCCATTGCTCAGTCAGGTATGCTTCAGTTCCTTGGCCTTATTAGTGTTGATGGGAAGAATCCTGGATTTTAGACTCGTGGGCTACAAATCCTTTAATAGGTTCTTCGGAGCACTTTGTCTCTTATACCCCTTGTGCTGGTAATGAGAAAATCCAGATAGTCGATGACTCTTTAGTCCCGATTGTTGGCAAAGGACAAATAGTTCTCTTCAACGGTCTCTCTCTCCATAATGTTTTGCATATGCTTAAGCTTTCTTACAATTTGTTATCTATCAATAAGATCACTCGTGAGTCGCATTGTAAAGTTATTTTCTTACCTGAATCTGTTTGTTTCAGGACTTGAGCTCAGGGAAGACGATTGAGATTGTCATACATAGCAAGGAACTTTACATCCTTGATGATGATACCTCTGGTAGTAGTATCTCTAGGACTAGTTTACTGCCTTCCTATTTTAGCACTTCTAAACATGACTTTATGTTGTGGCATTTTCGGTTGGATCACCCGAACTTTACTTATTTGAAATATTTGTTTTCCCATCTATTTTCTAAAATTGATGTCTCCTTACTATCTTGTGATGTGTGTATTCGGGCAAAACAACATCGAATTTCATTTTCCTCACAACCATATTACCCTTATCCATAGTGACGTTTGTGGTCCTTCCAAGGTCACCACCTCATCTGGGAAATGATGGTTTGTGACTTTCATTGATGATCATAACTGTCTTACCTGGGTCTACCTTATCGCCAATAAATCTGAGGTTTCATCTATTTTCCAAAGCATCTATCACACCATTGAAACACAATTTCATACAAAAATTTCCATTTTTGAAGTGATAATGATCGGGAATTCCTAAACCATAACCTTAGTGAATTCCTAGCCTCCAAGGGGATTGTTCACCAAAACTTGCGTGCCTACACTCCTCAACAAAATGGGGTGGCTGAGCAAAAATACCGTCATCTTCTAGAAGTAGCCCGTTCCCTTATGCTATATACTTCCCTTTCTTCATACTTGTGGGGAGATGCTGTTCTTACAGTAGCTTATTTAATCGATAGAATGCCTTCTCGTATCCTCCACCTTCAAACTCCCTTAGATTGGCTTAAGGAGTCCTATCCTTCTACTCACCTAATTTATGAGGTTCCCCTTCGTGTGTTGGGGTGTACCGCTTATGTCTATAATTTCAGCCCTAATTATACCAAATTTACCTCGGGCTCAAGCATGTGTGTTTGTTGGGTATCCCTTTCATCAGCTCAGTTATAAATGTTTCATCTACCGTCCAGGAAATACTTCGTCACTATGAATGTTACTTTTTGTGAGGTCCGACCCTACTTTTCTGTTAGCCATCTTCAGGAGAAGAGTATGAGTGAAGAGTCCAACTGTACCTTAGAGTTTACTAAACCTAGTCCTAGTACCGTGTCTGACTTCGATCCTCATCTCATTATACTACCCACAAACCAAGTTCTTTGAAAAACGTATTATAGAAGGAATCTTAGAAGGAAGTTGGGTAGACCTAAACATGTGATAGAACACCAAGTAGTGTGTTCTACTAATTTATTAAACAACCAAACTTTTACAGAAAACAGTACTAACACAGTCTTGAAAACAAAGTACAACACAAGAACTAATACAAAGATAAATCAAGTTCAACATAAAACATCAAAACAGTAAAGTACTTCACGATAATGGAAATAACTTGCTACAGACTACAGAAACTGAACACTTTCTGCATTCCCTGCTCTCCAGGAAATTACAGCCCTCCACTTCCAGAAACTGATTAACCACCCCCTCTCTTCCCTTCCTTCTTTCCCTTTTAACTCCCTCCCGTGTAACTAATCGTGGTCCCACCAAGGTGGTCTCCATTTCTTTCTCCATTTCTCTTCTCTTGTTCAGGTGCAACTGCTCCCTTTTTCCTCCTACTAAATTGTAAAATAATTGGTGGTCTATCAACATGTTGAGATTGATTGACATTTCATCAAAGAAAGACTTGACAGTGGAGCATATGCATTCCGTACATCCCTTTGAGCCAACAGGTTGTTGATGTTCTCACCAAGGGGCTTCTCAAACCAAACTTCGACTTTTGTGTTAGCAAGTTGAGCCTCATTGATATTTACGTTCCAACTTGAAGAGGAGTTAGAATTAGTGGGCTTGGCCCTTAGGGGATTTATGGAAAAATTATAGAAATATTTACCCTAATTCCTAAATCTTTTCCTTTTTTATTTCCATGTGTATTCTATTTATTCTCCCTCATTTTACCTATTGTATAATTCAATTTAGAAAATAATAAAAGAACAATAATATTGTAGTTTTTCTCCTGGTACTCGGATTTCCACGTAAGCCTTGGTTTTGTGTCAATAGAAACTAAAATCAATATCTTTTTATCCTTAATTTTTGAAATGGAGAAAGATTGATCAGAAGCTACTTCATTGATGCAAGCTCACTATTCACTATACTTACTATTGACTTTGATCACGTATGATTTCTGTTGGAATTAGTGGGCTTGGCCCTTAGGGTATTTATGGAAAGATTATGGAAATATTTACCCTAATTCCTAAATCTTTTCCTTTTTTTTATTCTTTTGTGTATTCTATTTTTTCTCCTCATTGTACCTATTGTAAAATTGATAAGAAAATAACAAGAAGAAAAATATTGTGGTTTTTCTCCCGGTACTTGGGTTTCCACATTAGTTTGTGTGTTTTTTGTCTTTACTTTCAACATGTTTTCAGAGCAGGACATTAAACAAACTTTAAACAACCCAAGTTGTGATGGAAATTAAACAGATGAGATAGCTGCCGGTTCTAATGTCTCCGTTGTCGATGCTCGGATCAATGCTGCCATGGACGAATGGCTACGCTGCCTTCAGAAAACGTTGGAAAACATAATTCAACAGATTTTCTTGTCGTCCGCGTCGCCAGAAACCACCCACGTGACTCCATGCTTTGGCCCATTCTGTTTAGATGCAGTGGACCAACCTAACTGTGCCACCCTCGTCATCATTTGTGGCTTGTAGTGTTCCCCAAGTGTCGATTCATGTTCTGCCACCTAATTCCGACCGGCCACCATTGCTTCTATAGTCAAATCGATATGCCCTGCCACCCATTAATCTTAGTTATTATCCCGATGTTAAGAATCCTCAAATTCACTTGACATTTGAGGTTGGTGAATTTTCGGCACATTCCAACCTTAACGTGCAGGCTTCCTCTTCGGGAATAACTCAAGAACAACTGGAAGGGCTTCAACAACAAATTGTTTCTTCCTTATCTTGTGATGTGTACGTACAAGCTAAACAACACCGAGTTTCGTTTCCCTCGCACCCTAAGCCAACCTGACCTTTTACTCTTGTCCATAGTGATGTATGGGGACCATCCAAGGTCACTACCTTCTCTGGAAAATGATGGTTTATGACCTTTATTGATGACTATACTCGTCTTACTTGGGTTTTTCTGATCTCCGACAAATCCGACGTTACCTCTACATTCTAGGACTTTTATCACACCATAGAAACACAATTCAATACAAAGATTGCAATCCTGCGAAATGATAATGGTCATGAGTTTCAAAACCACTTTGTCAACGAGTTCTTATCCTCTAAAGGAATTGTTCACCGAAGTTCCTGTACTTACATCCCCAACATAATGGGGTTGCCGAACGAAAAAATCGTCACATTTTGGAAGTTGCTCGATCCCTTATGTTGTCCACTTCTCTTCCTATCTTTGGGGTGATGCCATTCTCACTGCCACTCATCTCATCAACCACATGCCTTCCTCGCACAAGAAGATGTCGTACCCGAGAACTCAAAAGTCAAAGAAAGGTCTAAACTGTTGTTCTTCAGTTTTAGACACCATTAGATTGCCTCAAAGAATCGTATCCCTCCACTCGTCTCATACCTAATGTTTCCCTTCGGCTGTTCGGATGCTCTGCCTATGTCCTAGCCATGGTCCTAACCAAACTAAATTTGTCCCTAGGGCTCAAGCTTGTGTGTTTGTTGGGTATCCTCTACACCAACGAGACTATAAATGCTTCCATCCATCTTCACGTAAGTACTTTGTTACCATGAATGTCACCTTTATTGAAGATCGCCCTTTTTTTCCCGTTAGTCTACTTCAGGAGGAGAGTATGAGTGAAGAGTCTAACTATATGCTTCCCTTAGAGTCTACTTGTTCTACTGTGGTTACCTTAATTGATCCTAGCCTTCACAGTACAGTGCTACCAACAAATCAAGTTCATTGGAAAACCTATAATAGGAATCTCAGAGAAGGAGTTAAGTCTCCTGTTGTTTAGACGACTTCAGTTCAGGATTATCAACCAATAAGAGATCAAGGTATGGCTGATTCCATTAACTCACATAGTAATAACATAATGGGTGAGAATGACAGATCTAAGACGAATTCAATTGATTCACATATCAACAGTAAGGCAGGTGAGAACGACGTGTTTGAGACAGTTGTTCTGGAAGATATGTGTGAGCAGGGCAGTATTGATGGAGTCATTATAGACGGAGAGGACAAGATTGATGAGAACGAGATTGTTGCTGAACATACTGAAAACAAAACTAAGTCAAACCATTATGGAAATACTAGTAAGTACGATCCATCTCTTAATCTTCCTATTGCACTGAGGAAAGGTACTAGGTCCTGTACAAAGCACTCCATATCTAATTTTGTGTTATACGAGAATCTCTCACCACAGTTCAGAGTTTTTACTACCCCTATTGACTCTACCACAATTCCCAAGAGTATCCACCTTGCCTTAGAGTGTCCGAAATGGAAAGCTGCTGTCATGGAAGAAATGGGAGTCTTGGAAAAGAACAAGGCTTGGGATCTCTACACACTCCCTAAGGGACACAAGATTGTTGGATGCAAATCGGTGTTTACACTTATTGAAAAGAGAGACAACGAGTTCACACCAATTTACGTGGAAACCCGAGTACCGGGAGTAAAACCACGATTGTTTGTTGTTATTATTTTCTAATGAATAAAACAATAGGTATAGGGGAGAATAAATAGAGTACACAATGGAATAAAAAAGGAAAAGATTTAGGAAAATAAGGAATACATTCCCATAATCTTTCCATAATTATTCTAGGATTCTAACAAGGAAAAAGCCTAGAAAAAGGAAAGAATTCCAACACTCCCCCTCAAGTTGGGACGTAAATATCAATGAGGCCCAACTTGCTAACGCAAAAGTCGAAGTTTGGTCTGAGAAGCCCTTTGGTAAGAACATCAGCAACCTGTTGACTCGACGAGATGTACGGAATGCATATGCTCCCATTGTCAAGTTTTTCTTTGATAAAATGTCGATCAATCTCAACATGTTTAGTTCTATCATGTTGAACAGGGTTGTTAGCAATACTAATAGCGGCTTTATTATCACAGAAAAGCTTCAATGGTGTCTCACATTCCTGATGAAGATCTGTCAAAACTTTCTGAAGCCAAATTTCCTCACATATTTCTAAACTCATAGCTTTGTATTCAGCCTCAGTGCTGCTCCTGGCCACAACACTTTGCTTCTTACTCCTCCAAGTTACAAGATTGCCCCAAACAAAGGTACAATAACCAGAGGTAGATTTTCTGTCAACAACAGATCCTGCCCAATCCGAGTCAGTGTATGCCTCAATGGTCTTTCTGTTTGTTTTTCTAAACATCAGCCCTTTACTAGGTGTTGATTTTAAGTATCTCAAGATTCTGTTGACAGCTTTCATGTGTTCCTCATTAGGGGTCTGCATAAACTGGCTGACAACACTCACAGCAAAGGAAATATCAGGACGAGTGAGATAAGTAAATTAATTTACCCACGAGGCGTTGATACTGTTCTTTATCAACTGGAACTTGATCATCAGAGTTTCCTAGTTTGCAGTTGAATTCAATAGGAGTGTCAGTGGGACGACATCCTAACATACCTGTCTCGGTTAACAGATCAAGGATGTATTTTCTTTGAGATACGGAGATACCTTCTTTAGATCTGGCCACCTCCATTCCAAGGAAATATTTCAAATTTCCCAAATCCTTGATTTCAAACTCATCGCCCATTCTCTGCTTTAGTTGACTGATTAAGCTATGTCCCAAGTACAGAGCATATGGTACAATTGACAGACATAAGGCCAGACTAATTGCAAAAGGGTTCACTCAGATCTATGAGATTGACTATTCTGAGACTTTTTCTCCTATTGCAAACTTGAAAACTATTAGAGTTTTGTTGTCTGTGGCAGTGAATAAAGATTGACCCCTATATCAACTTGATGTTAAGAATGAATTCTTGAATGGAGATCTTAAAGCAGAAGTGTATATGAGCCCGTCTCTAGGATTTAAAACTCAATTTAATAATCAGGTTTGCAAGCTTCGAAAGTCCTTATACTGGTTGAAACAATCATCAAGAGCGTGGTTTGACAGATTTTCCACTTTCATCAAGTCTCGGGGGTACAATCGGGGGCACTTGCCACCTTGTTCATCAAAGTATCAAGGTAGGGAAAATTGCAGTATTGATTGTCTATGTCGATGACATTGTACTATCTGGGGATGATACTGATGAGATTGTTCAACTAAAGAAAAAGATGAGGTTTGAGTTTGAAATCAAGGATTTGGGAAATCTGAATTATTTCCTTGGAATGGAGGTGGCCAGATCTAAAGAAGGCATCTTCGTGTCTCAAAGAAAATACATCCTTGATTTGCTAACTGAGACTGGTATGTTGGAATGTCGTCTGACTGACACTCCTATTGAATTCAACTGTAAACTAGGAAATTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAACGCCTTATAGGTAAATTAATTTGCTTATTCCATACTCGTCTTGATATTTTCTTTGCTGAGTGTTGTCAGCCAGTTTATGCATGCTTCGTATGAGGAACACATAAAAGATGAATTACTATAAAGCTGGCCCATTGGGAAACAAAGAAGAAAAACTACCCTTTTTAAAGGGGTGTTTAAATTTACAACAATTCAAAGCATGAAACAAAATTATGTCTACAAAATTATAGAAGTTTGAGAAAAAATGTCCCTTTTTTATATCTGGGAGTGTTCATGCCAACTTTTTTATATCTGGGAGTGTTAATGCCAACTTACACGCACCTCGAAAAATCGTAGGAAATTAATTTCTAAGTAGGTGACCGTCATGGATCAAGTCCATGACCGCTTAGTCATATTTTTTGAGACCATGTCTTCTTTTTTACCACTAGGCTAATAATACCCATTGTGTTTGAGAAAATGTCCTTGAAATTCCTTCCATTCCTATCACACTTCAGAATCTGGAATCTGAAGGAAAACTTGATTAAGAACTAACCAAGAGGACTTTTTTCGATACCATGGAAGTGACCCACAAATTCTGAATCAAGAATAGCAAAGATACTGTTTGTCAACACTACATTCCATTCTAAAGCATTCAACACTCTTGACCTAATTCAACAACGTGACCCAATTCCTTTTCTCTCTCTCTCTCTCGTGAATATTCTCAAATCTTATATTGTGTGCAATGAGGAACACAAAATTTTAAAAACCAAAAGCCCCAAAACCACATAAAACCCATAGAAAGGGATCCTCCATACCACAAGGAGTCAAACGAATGTTTCCCAGTGTAGGCTGATGACGAAAGCAGAGTAGTTAGAACCTAACTGTTGGAAGGTAAGTTCTCTCTCATCTGTCTCCTTTCTCTCTCTTTTCTCTTTCTACCTGTTTGCTATTCCCCTTCCGTCGATTTCAACTTTTTGATGCCCTCCCTGACATTCTCTTTGTTACTCCATCCGCTCGGCATTCGCTCTCACGAGCAGTCTTCATCAACACTCCCACAAGTAGAGCAATTTTCCGAGTTTGGGTTGTAGTCACAATGGAAGTAGAAAGCTGCAAGCTGCTAAGTTCTTTTTATTGTATTTGGTCAGAGAACGGTTTTTTTCATAGAGAGGATGTGGAAGCTCAAAGGGATGCAGTCTCAGAAGCTCAGCTGAAATGGTTTTTGGTTGCTATAGCAGAGCTAACAAGTGGCTGAAAGGATCACTTCTTCCTTAAAAATGGGGGTGGACCGTGGAAGAACAAAACTTTCAAAGTTTAGAACTGAAGAGGGATGGATTTTAAGTTGTGATTTAGGGTGGGGTGATTGGATTGGTTGTGAGATAGGGAGTCTCCCCTCTTTTTATCTATGCCTCCCTCTTGGTAATAATCCAAAGAGCGTTTCTTTATGGGATCCAGTGGTGGATAAAGTCCGCAGGAGGTTGGCTTCGTGGAAAAAAGCTTCTTTTTTAAGGCGGGTCGTCTCATTTTGATTAAGTTTGTGCTAAGCGGTTTTTCAAACTATTCTTTTCCTTTTTAAAGCTCCGGAGGAGGTGTGCATGTGTTTGGCGGGGTTAATGCGGGATTTGAAGGGCTGTGTGAAGGAAAAGCTCTTATCTCATAAGGTGGGAGTTGATTGAGAAACCATTGTCTTTAGGAGGTCTAGAAACTGGAAACCCAAGAATCCCTATCAAAGCCTTTTAAGTGTTTGGGGTGTCAACCTAGTTGAGATGCTTAGGTGTGCCTCTTGGTCCTTAGGTTTCCTTGTTTTGGTGCTCTTTCTATAACTCTTTTGTACATTGAGCATTAATCTCGTTTTATTTTTTTATTAATATATAATATAGTGGTTGTTCTCCTTTTCAAAAAAAAAGAAAAAAAAAACACTGTGACCCAATTCTGTGAACTAAATGAACAAGAAGCTTACATGGAAAGGAGAAATGATTTTGAGAAACAGTCCCATGAATGGAATGGTTGGAGTGTCAGGTAGCTGAATGAACTTAAAAAGTACACATAGGTTAAGCTATGTCCCAAACTTTCAAGTTTGTATCTATTTGGTCTCCAAAATTTAAAATGTGTCTAATACATCCCAGATTTTCAATTGTGTCCAGTAGGGCCCTCAACTTTTAGTTTAGTGTCAGGTAGGTCCTTTCAAAAGTTTTAAAAATTAACTGAACTAATAAAACTCTAAACTCTCAATATTTTGTCTAGTGCATGTACGTCCATCAATTTTTAAAAAGAATGCTGATTAGGTAAAATTGAAAATTCAGGGACTGTTTGGGCATAAAGTTGAAAGTTCAATAATTGACACTTTTTGATGTTTAGGTACTAAGCTGAAAGTTCGAAGAATGAACTTATAGTTTAACTTTTCAATAAATAGGCATCTTAAAGCAAATTCTTTTCTTATATAAGGTGGAGAAATGTCTTAGGCTTTTGGATATTCGTTAGTTGTTTCCTAAAAGAACCAGATATTAGCACGTCACTAAAACATTTTAATATGCATATGTACTATTTTTAATTGACTTTCTTCAGCCGTATGATCTATTGTCTTTTATTGTTCTCTGTTCAAATCACTTTCTTCCAGCAAGAATTGTGTTTTTGGCTCAGTAGTCATTGATAAGCACATCGTCATCTGAAGGCCCATATTGTATTACTTAATTAAAATTGCAGGGAATGGAGCAGATGA

mRNA sequence

ATGCGTTCCAAACTAAGCTCACTAGTCCGCTCCGCCATCATATCTTCAAAATCTTCACAGAATGCCCAAGATGCCGCTCTTCAAAACTACGTTTCCACTATTGATCCTTTATCTCCCAGCACCTCTCTCTCTAACGCCATCAACTCCCCGACCTCCAAGAAGCTTCCTCAGAACCCCAATTCTGACGTTCAATTTCCTGCTCTCATTCTAGAAGAGTCTTCGGATTCTGGGGATCCTACGAAGCATCTAGCCAAGGCCATATCTTCCGTTCTGTGCGAGAACGGTTTTTTTCATAGAGAGGATGTGGAAGCTCAAAGGGATGCAGTCTCAGAAGCTCAGCTGAAATGGGAATGGAGCAGATGA

Coding sequence (CDS)

ATGCGTTCCAAACTAAGCTCACTAGTCCGCTCCGCCATCATATCTTCAAAATCTTCACAGAATGCCCAAGATGCCGCTCTTCAAAACTACGTTTCCACTATTGATCCTTTATCTCCCAGCACCTCTCTCTCTAACGCCATCAACTCCCCGACCTCCAAGAAGCTTCCTCAGAACCCCAATTCTGACGTTCAATTTCCTGCTCTCATTCTAGAAGAGTCTTCGGATTCTGGGGATCCTACGAAGCATCTAGCCAAGGCCATATCTTCCGTTCTGTGCGAGAACGGTTTTTTTCATAGAGAGGATGTGGAAGCTCAAAGGGATGCAGTCTCAGAAGCTCAGCTGAAATGGGAATGGAGCAGATGA

Protein sequence

MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCENGFFHREDVEAQRDAVSEAQLKWEWSR

Homology

[Close]

BLAST of CsGy3G022120 vs. NCBI nr
Match: KGN57963.1 (hypothetical protein Csa_3G415080 [Cucumis sativus])

HSP 1 Score: 172.2 bits (435), Expect = 1.1e-39
Identity = 98/112 (87.50%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 1   MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPN 60
           MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPN
Sbjct: 1   MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPN 60

Query: 61  SDVQFPALILEESSDSGDPTKHLAKAISSVLCENGFFHREDVEAQRDAVSEA 113
           SDVQFPALILEESSDSGDPTKHLAKAISSVLCE         EAQ + V E+
Sbjct: 61  SDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSV--MSPEAQGNCVEES 110

[Close]

BLAST of CsGy3G022120 vs. NCBI nr
Match: XP_011651464.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial [Cucumis sativus])

HSP 1 Score: 172.2 bits (435), Expect = 1.1e-39
Identity = 98/112 (87.50%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 1   MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPN 60
           MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPN
Sbjct: 1   MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPN 60

Query: 61  SDVQFPALILEESSDSGDPTKHLAKAISSVLCENGFFHREDVEAQRDAVSEA 113
           SDVQFPALILEESSDSGDPTKHLAKAISSVLCE         EAQ + V E+
Sbjct: 61  SDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSV--MSPEAQGNCVEES 110

[Close]

BLAST of CsGy3G022120 vs. NCBI nr
Match: XP_008454564.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1 [Cucumis melo])

HSP 1 Score: 127.9 bits (320), Expect = 2.4e-26
Identity = 82/120 (68.33%), Postives = 90/120 (75.00%), Query Frame = 0


Query: 1   MRSK---LSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAI-----NSPTS 60
           MRSK   LSSL RSAI ++KSS+N QDAALQN VS+IDPLS STSL NAI     NSPT 
Sbjct: 1   MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF 60

Query: 61  KKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCENGFFHREDVEAQRDAVSEA 113
           KKLPQNPNSDVQFPALILEESSDSGD  KHL +AISSVLCE         EAQ + V ++
Sbjct: 61  KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSV--RSPEAQGNCVEKS 118

[Close]

BLAST of CsGy3G022120 vs. NCBI nr
Match: XP_008454565.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X2 [Cucumis melo])

HSP 1 Score: 127.9 bits (320), Expect = 2.4e-26
Identity = 82/120 (68.33%), Postives = 90/120 (75.00%), Query Frame = 0


Query: 1   MRSK---LSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAI-----NSPTS 60
           MRSK   LSSL RSAI ++KSS+N QDAALQN VS+IDPLS STSL NAI     NSPT 
Sbjct: 1   MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF 60

Query: 61  KKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCENGFFHREDVEAQRDAVSEA 113
           KKLPQNPNSDVQFPALILEESSDSGD  KHL +AISSVLCE         EAQ + V ++
Sbjct: 61  KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSV--RSPEAQGNCVEKS 118

[Close]

BLAST of CsGy3G022120 vs. NCBI nr
Match: XP_022981387.1 (pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 123.2 bits (308), Expect = 5.8e-25
Identity = 75/115 (65.22%), Postives = 80/115 (69.57%), Query Frame = 0


Query: 5   LSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAIN-----SPTSKKLPQNP 64
           LSSL RSAII+SK SQN QDAAL+NYVS IDP SPSTSLS AI+     S  SKKLPQ  
Sbjct: 8   LSSLFRSAIIASKPSQNPQDAALKNYVSAIDPFSPSTSLSKAIDKRSIKSANSKKLPQKL 67

Query: 65  NSDVQFPALILEESSDSGDPTKHLAKAISSVLCENGFFHREDVEAQRDAVSEAQL 115
           NSDVQFPALILEE S SGD  KHL KAISS+LCE       D +   D  S  QL
Sbjct: 68  NSDVQFPALILEEPSGSGDSMKHLTKAISSILCEGSSVRSPDAQENGDENSLKQL 122

[Close]

BLAST of CsGy3G022120 vs. TrEMBL
Match: tr|A0A0A0L854|A0A0A0L854_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G415080 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 7.2e-40
Identity = 98/112 (87.50%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 1   MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPN 60
           MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPN
Sbjct: 1   MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPN 60

Query: 61  SDVQFPALILEESSDSGDPTKHLAKAISSVLCENGFFHREDVEAQRDAVSEA 113
           SDVQFPALILEESSDSGDPTKHLAKAISSVLCE         EAQ + V E+
Sbjct: 61  SDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSV--MSPEAQGNCVEES 110

[Close]

BLAST of CsGy3G022120 vs. TrEMBL
Match: tr|A0A1S3BYG2|A0A1S3BYG2_CUCME (pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494956 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.6e-26
Identity = 82/120 (68.33%), Postives = 90/120 (75.00%), Query Frame = 0


Query: 1   MRSK---LSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAI-----NSPTS 60
           MRSK   LSSL RSAI ++KSS+N QDAALQN VS+IDPLS STSL NAI     NSPT 
Sbjct: 1   MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF 60

Query: 61  KKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCENGFFHREDVEAQRDAVSEA 113
           KKLPQNPNSDVQFPALILEESSDSGD  KHL +AISSVLCE         EAQ + V ++
Sbjct: 61  KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSV--RSPEAQGNCVEKS 118

[Close]

BLAST of CsGy3G022120 vs. TrEMBL
Match: tr|A0A1S3C047|A0A1S3C047_CUCME (pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494956 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.6e-26
Identity = 82/120 (68.33%), Postives = 90/120 (75.00%), Query Frame = 0


Query: 1   MRSK---LSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAI-----NSPTS 60
           MRSK   LSSL RSAI ++KSS+N QDAALQN VS+IDPLS STSL NAI     NSPT 
Sbjct: 1   MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF 60

Query: 61  KKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCENGFFHREDVEAQRDAVSEA 113
           KKLPQNPNSDVQFPALILEESSDSGD  KHL +AISSVLCE         EAQ + V ++
Sbjct: 61  KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSV--RSPEAQGNCVEKS 118

[Close]

BLAST of CsGy3G022120 vs. TrEMBL
Match: tr|A0A2R6PT78|A0A2R6PT78_ACTCH (Pentatricopeptide repeat-containing protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc26353 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.7e-04
Identity = 38/97 (39.18%), Postives = 57/97 (58.76%), Query Frame = 0


Query: 5   LSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPN---- 64
           LSSL RSAI ++  +   +DA L+ +VS++D  SPSTS ++      S KLP++P+    
Sbjct: 6   LSSLFRSAIRTTAKTVPGEDATLKQFVSSLDVSSPSTSTASETTRKRSVKLPKSPSRSKN 65

Query: 65  ------SDVQFPALILEESSDSGDPTKHLAKAISSVL 92
                  D+    L L  +S+SG+ TK L+K ISS+L
Sbjct: 66  PCSTSLRDLAIDRLKLNSASNSGNSTKDLSKEISSIL 102

The following BLAST results are available for this feature:

BLAST of CsGy3G022120 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN57963.1	1.1e-39	87.50	hypothetical protein Csa_3G415080 [Cucumis sativus]	[more]
XP_011651464.1	1.1e-39	87.50	PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial ...	[more]
XP_008454564.1	2.4e-26	68.33	PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial-...	[more]
XP_008454565.1	2.4e-26	68.33	PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial-...	[more]
XP_022981387.1	5.8e-25	65.22	pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isofor...	[more]

BLAST of CsGy3G022120 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsGy3G022120 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy3G022120 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L854\|A0A0A0L854_CUCSA	7.2e-40	87.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G415080 PE=4 SV=1	[more]
tr\|A0A1S3BYG2\|A0A1S3BYG2_CUCME	1.6e-26	68.33	pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isofor...	[more]
tr\|A0A1S3C047\|A0A1S3C047_CUCME	1.6e-26	68.33	pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isofor...	[more]
tr\|A0A2R6PT78\|A0A2R6PT78_ACTCH	1.7e-04	39.18	Pentatricopeptide repeat-containing protein OS=Actinidia chinensis var. chinensi...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G022120.1	CsGy3G022120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..60

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G022120	Csa3G415080	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G022120	MELO3C018129	Melon (DHL92) v3.5.1	cgybmeB175
CsGy3G022120	CSPI03G23130	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G022120	MELO3C018128.2	Melon (DHL92) v3.6.1	cgybmedB175
CsGy3G022120	CsaV3_3G022860	Cucumber (Chinese Long) v3	cgybcucB117

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G022120	Cucurbita maxima (Rimu)	cgybcmaB286
CsGy3G022120	Cucurbita maxima (Rimu)	cgybcmaB370
CsGy3G022120	Cucurbita moschata (Rifu)	cgybcmoB259
CsGy3G022120	Cucurbita moschata (Rifu)	cgybcmoB341
CsGy3G022120	Cucurbita pepo (Zucchini)	cgybcpeB382
CsGy3G022120	Cucurbita pepo (Zucchini)	cgybcpeB437
CsGy3G022120	Bottle gourd (USVL1VR-Ls)	cgyblsiB180
CsGy3G022120	Watermelon (Charleston Gray)	cgybwcgB218
CsGy3G022120	Watermelon (97103) v1	cgybwmB234
CsGy3G022120	Silver-seed gourd	carcgybB0891
CsGy3G022120	Silver-seed gourd	carcgybB1001
CsGy3G022120	Watermelon (97103) v2	cgybwmbB210
CsGy3G022120	Wax gourd	cgybwgoB336