CSPI03G23130 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G23130
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Pentatricopeptide repeat-containing protein, putative
Location	Chr3 : 19948178 .. 19952273 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACCAGCCAAAATCGGAAAGTTGCCCTGGCCGATAAACCCCGAAAACCCAGCTGAGAGCGGTGCAGCTCAATTCGCCGGAGACCGGGAAGTTGCGGACCTCTTGGAATCTGATTCTCCAATGCGTTCCAAACTAAGCTCACTAGTCCGCTCCGCCATCATATCTTCAAAATCTTCACAGAATGCCCAAGATGCCGCTCTTCAAAACTACGTTTCCACTATTGATCCTTTATCTCCCAGCACCTCTCTCTCTAACGCCATCAACTCCCCGACCTCCAAGAAGCTTCCTCAGAACCCCAATTCTGACGTTCAATTTCCTGCTCTCATTCTAGAAGAGTCTTCGGATTCTGGTACGTGTATTGCATTTTATTACTTTGGTTATGTTTACATCGTGTTTTTGTCATTTTGGTTAATGTGTCTATAGTTAATCTTCAATCCAGCTTAATTTTGCCGTAGGCTTCGTGGTTTAGTGTTTTGTTGAAGCTGAAAAGAAGTTTTATTTTAATTATATTTCATTTGCATTGAAGGGCATGTGAATGACATTTGATTTGTCTTGTTTTACTTATCCCAAAAGTTCATGTTTTAATGCAGGGGATCCTACGAAGCATCTAGCCAAGGCCATATCTTCCGTTCTGTGCGGTACGTGTCATTGAATGTTTGTTGTAGGAATTCAATCTCAATTTGTTTTAGATTTGTTATAACTCATTAGTTACAATTTCCTTCTTTAAGTTGTTAATAACCTAATAAGCATATGGTAAATATTGAAGGTCAACGGCTAAAATATCTAATGAGTTTCTTTGGCTACTAAACGTAGGGTCAGGCAATTGTCCAATCCTCGAAGGTTTGGTCCAGCTCACGTATTAAAAAAAACATGTAGTGCCTTAGAAATTTTAGAGTGTATTCCTCTTGATGTATCTTTCAGCATTAGTCTCTTTTCATTTTACTAGTTTTCTTTAAAAAAAATAGCCACCTTTTGGATCTTACGTTTCAGATTTTTATGTTGTCTATTTCATCATACTGAGAATGAAGGGATGTGAGTAATCGAATTAATTTCCTGTCCAGTTATACAAGCTGATTAAATAAATTCTTATGTAGTAATACGTTCTATAAATTATAATAATTTTGATGATCAAACTGTAAACTAAAAATTTGGTTTCTTACATGGGCAGGTTTCACCATCCTAAACAGGTTTTAAAGTTGCATTTACTATTTATAATTATTTGATTTGTAATTTTCATAGACATTATTTCATATGTTATCGTCTTGTTTTGCCTCCAATTATGAATCTATCTTAATGCAGTTCTCAGTTTTTCTGTTTTCTCCAAGTGAACTGCTTTAGTAACGTATTATTTCCTTTTGCAGAAGGCTCATCTGTTATGTCTCCTGAAGCACAAGGAAATTGTGTTGAAGAATCTTTGGAAAAATTATTAGATATACCATGGTTTTCCATCAAAACAAATCATAGCTTAACATTACATCGCAAAGAAATATCCCGGGAAAGAAAGCATAACTGGGTATTAAAAAATACCCAGAGCGATAGATTTAGACGATTAGTTAGAAGTTGCGCAAACAGGCTGGGGAGTGATGTTACTCTAGAAGTCTTTGGTAAATTGGGACGAGAAACTGGTGTGAAAGAATACAATGCACTAGTAGGCATATGTTTAGAGAAGGCTAAGGCAAGTAAGGACGTGGAGGTTGTATTGGAACAGATTGGGAAGGTTTATCAGCTATTTAAACTAATGAAAGAACAGGGTTTCTCATTAGAAGATGAAACTTATGGCCCAGTGCTTGCGTGTTTAATTGACATGGACATGATGGAAGAATTTAATTTTTTCTGTGAGGCTATAAAAGATGGAAATCCAGGCTCAATATCAAGGTTGGGTTACTATAAGATGTTGTTCTATATTAAAATCAATGATGAAGAAAAAGTTCAGGAGCTTTGTTACCGTGCTACAGTTGATGATGGAGTGGACAAGTTCAGTTTACAAGGTACGGCCAACTGTTTATGGATACACAAACCTCAGCTGCACCTTTTGTCTTCTTGCTCTGAAATAAACAATGGGGAAGTTTTGCTTATCGGGAAACTCTATTTTTGTTTAAGATAATTGTTAAATTGGCGCCAAACCTAGAAGTTTAAGCTGATGGGTTTGGGTAAAGTTAATTATAATTTATACAAATACTTTTAACCATAAGAAATAACCTGTTGATAAAAGCATGAATAACAAGGGATCTTTTTTTGGCTGAGAAATTAGTAGAAAGCTCTCAATCAGCTATAGTAAATAACAACAAGAAATAACTAAATGTCTTGGTTGCAGCCTAAAAGAAATGCATATAGTCAGGTGGCGAGTCTTTGATGTAACATGTACTATGTTTGAGACTTAAGGCTGACGAGTATTATGTATTTTAAGCTTCTCTGATTTGTAGGTCCCGTTTGGTAAGCATTTCATTTTTGTTTTTGGTTTTTGAAAGTTAAGCCTATTTCCTTTCATTTTATTACCATGACATTAATACGTAAGAGTTGCATTTATAGTTAGACTCTAAAAACAAAAATGAGGTTTTTAAAAACTATTTTATTATTATTATTTTTAATTTTCAAACTTCGATTTTGTTTTTAAAAAAAGGGTAAAAAGTAGATATATCAAAACAACAAATTTAGAGGTGGAAGAGGTGTTTATAGGCTTAATTTGCAAAAATCAAAACAAAAAATGAAATGGTTACCAAAAGGGACCTTAGTATTTATTGTTTTTACGACAAGTTATTTTTTCAAGTTGTTTTTGCAGCAAGTTAAATTTTCAAGTTTGGTTTAGTTACTTCTTAGTTCATTATTTTAAGTTATTCTTTTAAATCTCTCAAAGGCTGGTTTGTAGCCTTGAAATAGGGATCCCCAGGCTGTAAGAGGCATTAGTTCTAAGCGAGTTCTTCAAGAATTCTCTAGATTTTGTTCAAGAAATTAGTTCTACACCAGACTCTCTCCCACCTCTTTCTATACCCTGGAATATTTTAGCTTTCCTTTTGAGAATAGGGTCAGCAATGATATTGGACAATTCTTGGAAATTATATTGAGGTTTAGAGTTCAATTTTGAAGTTGTGATAATTTTAAGGCTTTAGGGACAATCAAACTTGAAGTTGAATTCTTATTTAGCGTTTGCAATGAAAAATAACAAGCTATGTGAAAGAAATTTATAATAGAAGGAACCTATAATAAATAACACCTTTGGCATCCTCCTTGGGCAGCCCATAAAAATTCTTTGAAGTGATTAGAACAGTGTTTTCTCTGTTTAACTATTTCTGGAAAAAGGTTGTAGCTATTGTTTTAAAGATAATGCAGAGTTTAGCACATTTATCAACTGGGTACATACCAAAGGGAATATGACCGAGTTTCCCACTTTCCCACCCTTCGTTACCTGTACGGATAAAATGATAATCTCTCTAGATGCTTTTACATATTATATAGTAGCACACACTACTTCTATCCACTCCTTCATCAGGTCAGTTAGTCTTACCAGTCATGATGGATATGATCTTCTACAGGAGTTCAGTAGGTTGTCATGGTTGTTTCATATGATTTCAGTACTTTCTTACACATTAAATAAGAACACACCCACACCCACACCTACACCCACGCCCACACACAACTTCTATCTAATCCACTCATTCATCAGATCGGTTAGTCTTATTGGTCATGATGGATATGACCTTCTACATGAGTTCAGTAGGTTATGGATGTCCCATATGGCATAAGCAATTATAAAATTGAAATTTACATTCACAAACTTTTTTTATCAGCTATGTTCATGTTTTTGGTGAGGCATATATCTTACGATGAAATGGATACATTTCAGAGATAAACCTGTTTGGTTAAAAATTTGGAACCTTTGGTTACAGAAAATTATTTGTTGGCACTCTGTGGAAGTGAGCAGAAGAAGGAACTTTTACAGATGCTGGAAGTTATAGACATCACAAAACTTTCGACAACTGTAGTTGCACCTAACATCTTCAAATCCTTAGGGAGGCTATCACTTCACACTTTTGCAGAGAAGTCACTTTTGGCGTTTAAAACTTCTGGTATGTTGATGATTGCCTTAAAATTTTATTGA

mRNA sequence

ATGCGTTCCAAACTAAGCTCACTAGTCCGCTCCGCCATCATATCTTCAAAATCTTCACAGAATGCCCAAGATGCCGCTCTTCAAAACTACGTTTCCACTATTGATCCTTTATCTCCCAGCACCTCTCTCTCTAACGCCATCAACTCCCCGACCTCCAAGAAGCTTCCTCAGAACCCCAATTCTGACGTTCAATTTCCTGCTCTCATTCTAGAAGAGTCTTCGGATTCTGGGGATCCTACGAAGCATCTAGCCAAGGCCATATCTTCCGTTCTGTGCGAAGGCTCATCTGTTATGTCTCCTGAAGCACAAGGAAATTGTGTTGAAGAATCTTTGGAAAAATTATTAGATATACCATGGTTTTCCATCAAAACAAATCATAGCTTAACATTACATCGCAAAGAAATATCCCGGGAAAGAAAGCATAACTGGGTATTAAAAAATACCCAGAGCGATAGATTTAGACGATTAGTTAGAAGTTGCGCAAACAGGCTGGGGAGTGATGTTACTCTAGAAGTCTTTGGTAAATTGGGACGAGAAACTGGTGTGAAAGAATACAATGCACTAGTAGGCATATGTTTAGAGAAGGCTAAGGCAAGTAAGGACGTGGAGGTTGTATTGGAACAGATTGGGAAGGTTTATCAGCTATTTAAACTAATGAAAGAACAGGGTTTCTCATTAGAAGATGAAACTTATGGCCCAGTGCTTGCGTGTTTAATTGACATGGACATGATGGAAGAATTTAATTTTTTCTGTGAGGCTATAAAAGATGGAAATCCAGGCTCAATATCAAGGTTGGGTTACTATAAGATGTTGTTCTATATTAAAATCAATGATGAAGAAAAAGTTCAGGAGCTTTGTTACCGTGCTACAGTTGATGATGGAGTGGACAAGTTCAGTTTACAAGAAAATTATTTGTTGGCACTCTGTGGAAGTGAGCAGAAGAAGGAACTTTTACAGATGCTGGAAGTTATAGACATCACAAAACTTTCGACAACTGTAGTTGCACCTAACATCTTCAAATCCTTAGGGAGGCTATCACTTCACACTTTTGCAGAGAAGTCACTTTTGGCGTTTAAAACTTCTGGTATGTTGATGATTGCCTTAAAATTTTATTGA

Coding sequence (CDS)

ATGCGTTCCAAACTAAGCTCACTAGTCCGCTCCGCCATCATATCTTCAAAATCTTCACAGAATGCCCAAGATGCCGCTCTTCAAAACTACGTTTCCACTATTGATCCTTTATCTCCCAGCACCTCTCTCTCTAACGCCATCAACTCCCCGACCTCCAAGAAGCTTCCTCAGAACCCCAATTCTGACGTTCAATTTCCTGCTCTCATTCTAGAAGAGTCTTCGGATTCTGGGGATCCTACGAAGCATCTAGCCAAGGCCATATCTTCCGTTCTGTGCGAAGGCTCATCTGTTATGTCTCCTGAAGCACAAGGAAATTGTGTTGAAGAATCTTTGGAAAAATTATTAGATATACCATGGTTTTCCATCAAAACAAATCATAGCTTAACATTACATCGCAAAGAAATATCCCGGGAAAGAAAGCATAACTGGGTATTAAAAAATACCCAGAGCGATAGATTTAGACGATTAGTTAGAAGTTGCGCAAACAGGCTGGGGAGTGATGTTACTCTAGAAGTCTTTGGTAAATTGGGACGAGAAACTGGTGTGAAAGAATACAATGCACTAGTAGGCATATGTTTAGAGAAGGCTAAGGCAAGTAAGGACGTGGAGGTTGTATTGGAACAGATTGGGAAGGTTTATCAGCTATTTAAACTAATGAAAGAACAGGGTTTCTCATTAGAAGATGAAACTTATGGCCCAGTGCTTGCGTGTTTAATTGACATGGACATGATGGAAGAATTTAATTTTTTCTGTGAGGCTATAAAAGATGGAAATCCAGGCTCAATATCAAGGTTGGGTTACTATAAGATGTTGTTCTATATTAAAATCAATGATGAAGAAAAAGTTCAGGAGCTTTGTTACCGTGCTACAGTTGATGATGGAGTGGACAAGTTCAGTTTACAAGAAAATTATTTGTTGGCACTCTGTGGAAGTGAGCAGAAGAAGGAACTTTTACAGATGCTGGAAGTTATAGACATCACAAAACTTTCGACAACTGTAGTTGCACCTAACATCTTCAAATCCTTAGGGAGGCTATCACTTCACACTTTTGCAGAGAAGTCACTTTTGGCGTTTAAAACTTCTGGTATGTTGATGATTGCCTTAAAATTTTATTGA

Homology

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BLAST of CSPI03G23130 vs. Swiss-Prot
Match: PP304_ARATH (Pentatricopeptide repeat-containing protein At4g04790, mitochondrial OS=Arabidopsis thaliana GN=At4g04790 PE=2 SV=2)

HSP 1 Score: 212.2 bits (539), Expect = 9.5e-54
Identity = 111/257 (43.19%), Postives = 166/257 (64.59%), Query Frame = 1


Query: 108 EESLEK--LLDIPWFSIKTNHSLTLHRKEISRERKHNWVLK-NTQSDRFRRLVRSCANRL 167
           + SLEK   L IP F+ K  + ++L  KE+SRERK   V K N  S RF ++ R  A +L
Sbjct: 74  KSSLEKNLFLKIPSFTTKIPYDISLRTKELSRERKERRVYKQNGLSRRFAKIFRDSAQKL 133

Query: 168 GSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASKDVEVVLEQIGKVYQLFKLMKEQGF 227
           G++     F ++ +E  V EYNA++G+ LE A+ S D++  L  I K ++L K M+++GF
Sbjct: 134 GTEAMFGAFDRVAKEMSVTEYNAMIGVYLEHAEKSNDLDYALGHIEKAFELLKSMRDRGF 193

Query: 228 SLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQE 287
            +E+  YGP+L  LI MDM++EF+ F + I++ +PGS+ RLGYY+ML +I + D EK++E
Sbjct: 194 LIEERVYGPLLGYLIGMDMVDEFHSFKDVIREASPGSVERLGYYEMLLWIHLGDGEKIEE 253

Query: 288 LCYRATVDDGVDKFSLQENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGR 347
           LC     D+G     LQENYLLALC  +QK  L ++LE++DITK+ ++ +  NIF+ LGR
Sbjct: 254 LCSTIDGDNGESLSVLQENYLLALCKKDQKYHLERLLEIVDITKVRSSDLLANIFEYLGR 313

Query: 348 LSLHTFAEKSLLAFKTS 362
            SL + A + L   + S
Sbjct: 314 FSLDSVASRFLWELRES 330

[Close]

BLAST of CSPI03G23130 vs. Swiss-Prot
Match: PP335_ARATH (Pentatricopeptide repeat-containing protein At4g21880, mitochondrial OS=Arabidopsis thaliana GN=At4g21880 PE=3 SV=2)

HSP 1 Score: 174.5 bits (441), Expect = 2.2e-42
Identity = 89/223 (39.91%), Postives = 136/223 (60.99%), Query Frame = 1


Query: 133 KEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGIC 192
           K+ SR R      +N QS+   +L + C  +LG++   EV  K+G+E G KEYNA+  +C
Sbjct: 122 KQASRGRMLTENYQNKQSEIMEKLAKGCVRKLGTETMFEVLTKMGKEAGEKEYNAMTKLC 181

Query: 193 LEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCE 252
           +++A+ S D E  L+QIGK  +  K M++ GFS+ +  YGP    L+DM+M+ EF    +
Sbjct: 182 IQRARRSNDAEYALDQIGKAIEHLKEMRQLGFSIGEGAYGPFFKYLVDMEMVAEFQILKD 241

Query: 253 AIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCGSE 312
            IK+  P S  RL YY+ML +I++NDEEK+ +LC +   D G+    LQE YL+ALC  +
Sbjct: 242 FIKEACPESCGRLVYYEMLLWIQVNDEEKIHKLCNKVD-DSGLSLSILQEYYLVALCEKD 301

Query: 313 QKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSL 356
            K+   ++LE++DIT +S+     +IF  LG+  L + A K L
Sbjct: 302 SKENFQKLLEIVDITTVSSPDALKSIFGYLGKSLLESVAMKLL 343

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BLAST of CSPI03G23130 vs. TrEMBL
Match: A0A0A0L854_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G415080 PE=4 SV=1)

HSP 1 Score: 713.4 bits (1840), Expect = 1.5e-202
Identity = 370/371 (99.73%), Postives = 370/371 (99.73%), Query Frame = 1


Query: 1   MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPN 60
           MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPN
Sbjct: 1   MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPN 60

Query: 61  SDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSPEAQGNCVEESLEKLLDIPWF 120
           SDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSPEAQGNCVEESLEKLLDIPWF
Sbjct: 61  SDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSPEAQGNCVEESLEKLLDIPWF 120

Query: 121 SIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRET 180
           SIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRET
Sbjct: 121 SIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRET 180

Query: 181 GVKEYNALVGICLEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLID 240
           GVKEYNALVGICLEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLID
Sbjct: 181 GVKEYNALVGICLEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLID 240

Query: 241 MDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSL 300
           MDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSL
Sbjct: 241 MDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSL 300

Query: 301 QENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKT 360
           QENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKT
Sbjct: 301 QENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKT 360

Query: 361 SGMLMIALKFY 372
           SG LMIALKFY
Sbjct: 361 SGTLMIALKFY 371

[Close]

BLAST of CSPI03G23130 vs. TrEMBL
Match: A0A061F5D3_THECC (Tetratricopeptide repeat-like superfamily protein, putative isoform 2 OS=Theobroma cacao GN=TCM_031088 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 6.4e-81
Identity = 169/346 (48.84%), Postives = 234/346 (67.63%), Query Frame = 1


Query: 15  SSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPNSDVQFPALILEESS 74
           SS SS +A+D +L+ +VS++D  S S+  S +  SP + K P    +D     L+ + +S
Sbjct: 29  SSSSSLDARDKSLKEFVSSLDTSSLSSPASFSKRSPIAIKKP----TDGSLFNLLRDSAS 88

Query: 75  DSGDPTKHLAKAISSVLCEGSSVMSPEAQGNCVEESLEKLLDIPWFSIKTNHSLTLHRKE 134
            S D    L   +SS+LC+GS V S +  G        + L IPW S+ +N+  +L +KE
Sbjct: 89  LSEDSMNELTHEVSSLLCDGS-VNSSKDSG--------RALTIPWLSM-SNNKTSLMQKE 148

Query: 135 ISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGICLE 194
           +SRERK  WV K +Q  RF RL++ C ++LG+  T+EVF KLGRETG+KEYNAL+ +CLE
Sbjct: 149 VSRERKQKWVFKTSQVIRFNRLIKMCGDKLGTKATMEVFDKLGRETGLKEYNALIELCLE 208

Query: 195 KAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAI 254
            A+ S D +V LE I + ++ FK M+E+GF +E+ET GP L   ID  M+EEF FFC  I
Sbjct: 209 NARTSDDEDVALEHISEAFRTFKKMRERGFQVEEETIGPFLMYFIDRGMVEEFFFFCGPI 268

Query: 255 KDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCGSEQK 314
           KDGNP  + RLGYY+ML +I +N+E+K+QELC      DG+D F L+ENYLLALC S +K
Sbjct: 269 KDGNPSLLPRLGYYEMLLWIGVNNEKKIQELCNYIAATDGIDDFELKENYLLALCESGRK 328

Query: 315 KELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKT 361
           ++L+Q+LE+IDI ++S+     NIFKSLGRLSL +FAEK LLAFK+
Sbjct: 329 EDLMQLLEIIDIKRISSVNKVANIFKSLGRLSLESFAEKFLLAFKS 360

[Close]

BLAST of CSPI03G23130 vs. TrEMBL
Match: A0A061F6A5_THECC (Tetratricopeptide repeat-like superfamily protein, putative isoform 4 OS=Theobroma cacao GN=TCM_031088 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 6.4e-81
Identity = 169/346 (48.84%), Postives = 234/346 (67.63%), Query Frame = 1


Query: 15  SSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPNSDVQFPALILEESS 74
           SS SS +A+D +L+ +VS++D  S S+  S +  SP + K P    +D     L+ + +S
Sbjct: 29  SSSSSLDARDKSLKEFVSSLDTSSLSSPASFSKRSPIAIKKP----TDGSLFNLLRDSAS 88

Query: 75  DSGDPTKHLAKAISSVLCEGSSVMSPEAQGNCVEESLEKLLDIPWFSIKTNHSLTLHRKE 134
            S D    L   +SS+LC+GS V S +  G        + L IPW S+ +N+  +L +KE
Sbjct: 89  LSEDSMNELTHEVSSLLCDGS-VNSSKDSG--------RALTIPWLSM-SNNKTSLMQKE 148

Query: 135 ISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGICLE 194
           +SRERK  WV K +Q  RF RL++ C ++LG+  T+EVF KLGRETG+KEYNAL+ +CLE
Sbjct: 149 VSRERKQKWVFKTSQVIRFNRLIKMCGDKLGTKATMEVFDKLGRETGLKEYNALIELCLE 208

Query: 195 KAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAI 254
            A+ S D +V LE I + ++ FK M+E+GF +E+ET GP L   ID  M+EEF FFC  I
Sbjct: 209 NARTSDDEDVALEHISEAFRTFKKMRERGFQVEEETIGPFLMYFIDRGMVEEFFFFCGPI 268

Query: 255 KDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCGSEQK 314
           KDGNP  + RLGYY+ML +I +N+E+K+QELC      DG+D F L+ENYLLALC S +K
Sbjct: 269 KDGNPSLLPRLGYYEMLLWIGVNNEKKIQELCNYIAATDGIDDFELKENYLLALCESGRK 328

Query: 315 KELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKT 361
           ++L+Q+LE+IDI ++S+     NIFKSLGRLSL +FAEK LLAFK+
Sbjct: 329 EDLMQLLEIIDIKRISSVNKVANIFKSLGRLSLESFAEKFLLAFKS 360

[Close]

BLAST of CSPI03G23130 vs. TrEMBL
Match: A0A0D2Q9M0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G082600 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 6.6e-78
Identity = 174/377 (46.15%), Postives = 243/377 (64.46%), Query Frame = 1


Query: 5   LSSLVRSAIISS---KSSQNAQDAALQNYVSTIDPLS-----PSTSLSNA---INSPTSK 64
           LSSL ++A+ ++    SS  + D  L+ +VS++D  S     PS S S+A   I SP   
Sbjct: 9   LSSLFKTAVKNATKESSSLPSGDKPLKQFVSSLDTSSAPSPSPSPSPSSASFRIRSPQPT 68

Query: 65  KLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSPEAQGNCVE----- 124
           K P N  S     + +L+ +S S +        + S+LC G     PE+  +  E     
Sbjct: 69  KKPANDGS---LHSWLLQPASTSENSIGGFTDELHSILCTGH----PESSKDIEEMMDNG 128

Query: 125 ESLEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDV 184
            SL ++L+IPW S  +N++++L RKE+SRERK  WV K TQS RF RL++ C ++LG+  
Sbjct: 129 SSLGRVLNIPWLSNVSNNNISLRRKELSRERKQKWVFKKTQSGRFNRLIKMCGDKLGTKA 188

Query: 185 TLEVFGKLGRETGVKEYNALVGICLEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLED 244
           T+EVF KLGR+TG+KEYNAL+ ICLEKA+ S D +  LE + + ++  K M+E+GF +E+
Sbjct: 189 TIEVFDKLGRDTGLKEYNALIAICLEKARTSNDEDDALEHMSEAFKTLKKMRERGFQVEE 248

Query: 245 ETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYR 304
            TYGP L   IDM M+EEF FFC  IK+GNP S++RLGYY+ML +I +N+EEK+QELC  
Sbjct: 249 GTYGPFLMYFIDMGMVEEFFFFCGPIKEGNPSSVTRLGYYEMLLWIGVNNEEKIQELCNC 308

Query: 305 ATVDDGVDKFSLQENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLH 364
               D  D F L+ENYLLALC S  +K+++Q+LEVIDIT++S+  V  NIF+SLGRLS  
Sbjct: 309 IVAADEEDDFKLKENYLLALCES-GRKDIMQLLEVIDITRISSVNVVANIFESLGRLSFD 368

Query: 365 TFAEKSLLAFKTSGMLM 366
           +FAEK L   K +   M
Sbjct: 369 SFAEKFLWTLKNNDYKM 377

[Close]

BLAST of CSPI03G23130 vs. TrEMBL
Match: A0A0D2M8B9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G082600 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 6.6e-78
Identity = 174/377 (46.15%), Postives = 243/377 (64.46%), Query Frame = 1


Query: 5   LSSLVRSAIISS---KSSQNAQDAALQNYVSTIDPLS-----PSTSLSNA---INSPTSK 64
           LSSL ++A+ ++    SS  + D  L+ +VS++D  S     PS S S+A   I SP   
Sbjct: 9   LSSLFKTAVKNATKESSSLPSGDKPLKQFVSSLDTSSAPSPSPSPSPSSASFRIRSPQPT 68

Query: 65  KLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSPEAQGNCVE----- 124
           K P N  S     + +L+ +S S +        + S+LC G     PE+  +  E     
Sbjct: 69  KKPANDGS---LHSWLLQPASTSENSIGGFTDELHSILCTGH----PESSKDIEEMMDNG 128

Query: 125 ESLEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDV 184
            SL ++L+IPW S  +N++++L RKE+SRERK  WV K TQS RF RL++ C ++LG+  
Sbjct: 129 SSLGRVLNIPWLSNVSNNNISLRRKELSRERKQKWVFKKTQSGRFNRLIKMCGDKLGTKA 188

Query: 185 TLEVFGKLGRETGVKEYNALVGICLEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLED 244
           T+EVF KLGR+TG+KEYNAL+ ICLEKA+ S D +  LE + + ++  K M+E+GF +E+
Sbjct: 189 TIEVFDKLGRDTGLKEYNALIAICLEKARTSNDEDDALEHMSEAFKTLKKMRERGFQVEE 248

Query: 245 ETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYR 304
            TYGP L   IDM M+EEF FFC  IK+GNP S++RLGYY+ML +I +N+EEK+QELC  
Sbjct: 249 GTYGPFLMYFIDMGMVEEFFFFCGPIKEGNPSSVTRLGYYEMLLWIGVNNEEKIQELCNC 308

Query: 305 ATVDDGVDKFSLQENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLH 364
               D  D F L+ENYLLALC S  +K+++Q+LEVIDIT++S+  V  NIF+SLGRLS  
Sbjct: 309 IVAADEEDDFKLKENYLLALCES-GRKDIMQLLEVIDITRISSVNVVANIFESLGRLSFD 368

Query: 365 TFAEKSLLAFKTSGMLM 366
           +FAEK L   K +   M
Sbjct: 369 SFAEKFLWTLKNNDYKM 377

[Close]

BLAST of CSPI03G23130 vs. TAIR10
Match: AT4G04790.1 (AT4G04790.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 212.2 bits (539), Expect = 5.3e-55
Identity = 111/257 (43.19%), Postives = 166/257 (64.59%), Query Frame = 1


Query: 108 EESLEK--LLDIPWFSIKTNHSLTLHRKEISRERKHNWVLK-NTQSDRFRRLVRSCANRL 167
           + SLEK   L IP F+ K  + ++L  KE+SRERK   V K N  S RF ++ R  A +L
Sbjct: 74  KSSLEKNLFLKIPSFTTKIPYDISLRTKELSRERKERRVYKQNGLSRRFAKIFRDSAQKL 133

Query: 168 GSDVTLEVFGKLGRETGVKEYNALVGICLEKAKASKDVEVVLEQIGKVYQLFKLMKEQGF 227
           G++     F ++ +E  V EYNA++G+ LE A+ S D++  L  I K ++L K M+++GF
Sbjct: 134 GTEAMFGAFDRVAKEMSVTEYNAMIGVYLEHAEKSNDLDYALGHIEKAFELLKSMRDRGF 193

Query: 228 SLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQE 287
            +E+  YGP+L  LI MDM++EF+ F + I++ +PGS+ RLGYY+ML +I + D EK++E
Sbjct: 194 LIEERVYGPLLGYLIGMDMVDEFHSFKDVIREASPGSVERLGYYEMLLWIHLGDGEKIEE 253

Query: 288 LCYRATVDDGVDKFSLQENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGR 347
           LC     D+G     LQENYLLALC  +QK  L ++LE++DITK+ ++ +  NIF+ LGR
Sbjct: 254 LCSTIDGDNGESLSVLQENYLLALCKKDQKYHLERLLEIVDITKVRSSDLLANIFEYLGR 313

Query: 348 LSLHTFAEKSLLAFKTS 362
            SL + A + L   + S
Sbjct: 314 FSLDSVASRFLWELRES 330

[Close]

BLAST of CSPI03G23130 vs. TAIR10
Match: AT4G21880.1 (AT4G21880.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 174.5 bits (441), Expect = 1.2e-43
Identity = 89/223 (39.91%), Postives = 136/223 (60.99%), Query Frame = 1


Query: 133 KEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGIC 192
           K+ SR R      +N QS+   +L + C  +LG++   EV  K+G+E G KEYNA+  +C
Sbjct: 122 KQASRGRMLTENYQNKQSEIMEKLAKGCVRKLGTETMFEVLTKMGKEAGEKEYNAMTKLC 181

Query: 193 LEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCE 252
           +++A+ S D E  L+QIGK  +  K M++ GFS+ +  YGP    L+DM+M+ EF    +
Sbjct: 182 IQRARRSNDAEYALDQIGKAIEHLKEMRQLGFSIGEGAYGPFFKYLVDMEMVAEFQILKD 241

Query: 253 AIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSLQENYLLALCGSE 312
            IK+  P S  RL YY+ML +I++NDEEK+ +LC +   D G+    LQE YL+ALC  +
Sbjct: 242 FIKEACPESCGRLVYYEMLLWIQVNDEEKIHKLCNKVD-DSGLSLSILQEYYLVALCEKD 301

Query: 313 QKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSL 356
            K+   ++LE++DIT +S+     +IF  LG+  L + A K L
Sbjct: 302 SKENFQKLLEIVDITTVSSPDALKSIFGYLGKSLLESVAMKLL 343

[Close]

BLAST of CSPI03G23130 vs. NCBI nr
Match: gi|700202830|gb|KGN57963.1| (hypothetical protein Csa_3G415080 [Cucumis sativus])

HSP 1 Score: 713.4 bits (1840), Expect = 2.1e-202
Identity = 370/371 (99.73%), Postives = 370/371 (99.73%), Query Frame = 1


Query: 1   MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPN 60
           MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPN
Sbjct: 1   MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPN 60

Query: 61  SDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSPEAQGNCVEESLEKLLDIPWF 120
           SDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSPEAQGNCVEESLEKLLDIPWF
Sbjct: 61  SDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSPEAQGNCVEESLEKLLDIPWF 120

Query: 121 SIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRET 180
           SIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRET
Sbjct: 121 SIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRET 180

Query: 181 GVKEYNALVGICLEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLID 240
           GVKEYNALVGICLEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLID
Sbjct: 181 GVKEYNALVGICLEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLID 240

Query: 241 MDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSL 300
           MDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSL
Sbjct: 241 MDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSL 300

Query: 301 QENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKT 360
           QENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKT
Sbjct: 301 QENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKT 360

Query: 361 SGMLMIALKFY 372
           SG LMIALKFY
Sbjct: 361 SGTLMIALKFY 371

[Close]

BLAST of CSPI03G23130 vs. NCBI nr
Match: gi|778681163|ref|XP_011651464.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial [Cucumis sativus])

HSP 1 Score: 699.9 bits (1805), Expect = 2.4e-198
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 1


Query: 1   MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPN 60
           MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPN
Sbjct: 1   MRSKLSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPN 60

Query: 61  SDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSPEAQGNCVEESLEKLLDIPWF 120
           SDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSPEAQGNCVEESLEKLLDIPWF
Sbjct: 61  SDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSPEAQGNCVEESLEKLLDIPWF 120

Query: 121 SIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRET 180
           SIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRET
Sbjct: 121 SIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRET 180

Query: 181 GVKEYNALVGICLEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLID 240
           GVKEYNALVGICLEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLID
Sbjct: 181 GVKEYNALVGICLEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLID 240

Query: 241 MDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSL 300
           MDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSL
Sbjct: 241 MDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFSL 300

Query: 301 QENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKT 360
           QENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKT
Sbjct: 301 QENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFKT 360

Query: 361 SG 363
           SG
Sbjct: 361 SG 362

[Close]

BLAST of CSPI03G23130 vs. NCBI nr
Match: gi|659109137|ref|XP_008454564.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1 [Cucumis melo])

HSP 1 Score: 613.6 bits (1581), Expect = 2.3e-172
Identity = 328/370 (88.65%), Postives = 338/370 (91.35%), Query Frame = 1


Query: 1   MRSK---LSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAI-----NSPTS 60
           MRSK   LSSL RSAI ++KSS+N QDAALQN VS+IDPLS STSL NAI     NSPT 
Sbjct: 1   MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF 60

Query: 61  KKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSPEAQGNCVEESLE 120
           KKLPQNPNSDVQFPALILEESSDSGD  KHL +AISSVLCEGSSV SPEAQGNCVE+SLE
Sbjct: 61  KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSVRSPEAQGNCVEKSLE 120

Query: 121 KLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEV 180
           KLLDIPWFSIKTNHSLTLH KEIS ERK  WVLKNTQSDRFRRLVRSCA+RLGSDVTLEV
Sbjct: 121 KLLDIPWFSIKTNHSLTLHHKEISWERKQKWVLKNTQSDRFRRLVRSCADRLGSDVTLEV 180

Query: 181 FGKLGRETGVKEYNALVGICLEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYG 240
           FGKLGRETGVKEY+ALVGICLEKAKAS DVEVVL QIGKVYQ+FK MKEQGFSLED TYG
Sbjct: 181 FGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYG 240

Query: 241 PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD 300
           PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
Sbjct: 241 PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD 300

Query: 301 DGVDKFSLQENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAE 360
           DGVDKFSLQENYLLALC SEQ K+LLQMLEVIDITKLSTTVVAP IFK LGRLSLHTFAE
Sbjct: 301 DGVDKFSLQENYLLALCESEQTKQLLQMLEVIDITKLSTTVVAPIIFKCLGRLSLHTFAE 360

Query: 361 KSLLAFKTSG 363
           K LLAFKTSG
Sbjct: 361 KLLLAFKTSG 370

[Close]

BLAST of CSPI03G23130 vs. NCBI nr
Match: gi|659109139|ref|XP_008454565.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X2 [Cucumis melo])

HSP 1 Score: 516.5 bits (1329), Expect = 3.8e-143
Identity = 274/311 (88.10%), Postives = 283/311 (91.00%), Query Frame = 1


Query: 1   MRSK---LSSLVRSAIISSKSSQNAQDAALQNYVSTIDPLSPSTSLSNAI-----NSPTS 60
           MRSK   LSSL RSAI ++KSS+N QDAALQN VS+IDPLS STSL NAI     NSPT 
Sbjct: 1   MRSKSKQLSSLFRSAIKAAKSSKNPQDAALQNNVSSIDPLSLSTSLYNAIYKRSVNSPTF 60

Query: 61  KKLPQNPNSDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSPEAQGNCVEESLE 120
           KKLPQNPNSDVQFPALILEESSDSGD  KHL +AISSVLCEGSSV SPEAQGNCVE+SLE
Sbjct: 61  KKLPQNPNSDVQFPALILEESSDSGDSVKHLTEAISSVLCEGSSVRSPEAQGNCVEKSLE 120

Query: 121 KLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEV 180
           KLLDIPWFSIKTNHSLTLH KEIS ERK  WVLKNTQSDRFRRLVRSCA+RLGSDVTLEV
Sbjct: 121 KLLDIPWFSIKTNHSLTLHHKEISWERKQKWVLKNTQSDRFRRLVRSCADRLGSDVTLEV 180

Query: 181 FGKLGRETGVKEYNALVGICLEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYG 240
           FGKLGRETGVKEY+ALVGICLEKAKAS DVEVVL QIGKVYQ+FK MKEQGFSLED TYG
Sbjct: 181 FGKLGRETGVKEYDALVGICLEKAKASNDVEVVLGQIGKVYQIFKSMKEQGFSLEDGTYG 240

Query: 241 PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD 300
           PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD
Sbjct: 241 PVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVD 300

Query: 301 DGVDKFSLQEN 304
           DGVDKFSLQ N
Sbjct: 301 DGVDKFSLQGN 311

[Close]

BLAST of CSPI03G23130 vs. NCBI nr
Match: gi|731432614|ref|XP_010644336.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like [Vitis vinifera])

HSP 1 Score: 336.7 bits (862), Expect = 5.3e-89
Identity = 186/360 (51.67%), Postives = 248/360 (68.89%), Query Frame = 1


Query: 5   LSSLVRSAII--SSKSSQNAQDAALQNYVSTIDPLS---PSTSLSNAINSPTSKKLPQNP 64
           LSSL RSA+   S  SS  A DA L+++VS++D  S   P  S   +I+S T  +   +P
Sbjct: 9   LSSLFRSAVKARSKPSSSPADDATLKHFVSSLDTSSSEFPKISPKTSISSGTGSETTSHP 68

Query: 65  NSDVQFPALILEESSDSGDPTKHLAKAISSVLCEGSSVMSPEAQGNCVEESLEKLLDIPW 124
                             D TK L++ +SS+LC G    SP++Q    E+ LEK+LD+PW
Sbjct: 69  E-----------------DSTKQLSQTLSSILCGG----SPDSQLTNDEKPLEKVLDVPW 128

Query: 125 FSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRE 184
           F   ++++++L RKE+SRERK  WV KNTQ  R  RLV++CA +LG++ T++VFGKLGRE
Sbjct: 129 FPTLSHNNISLRRKEVSRERKQKWVFKNTQGGRLDRLVKTCAQKLGTEATIQVFGKLGRE 188

Query: 185 TGVKEYNALVGICLEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLI 244
           TGVKEY AL+GIC+EKA+ S D E  LEQI K +QLF+ MKEQGF +E+ETYGP    LI
Sbjct: 189 TGVKEYKALLGICIEKARTSDDEEASLEQIYKAFQLFEEMKEQGFHIEEETYGPFFMYLI 248

Query: 245 DMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKINDEEKVQELCYRATVDDGVDKFS 304
           DM M+EEF+FF   I D N  S+SRLGYY+ML ++++N+EEK+QELC     DDG DK +
Sbjct: 249 DMGMIEEFHFFHGVITDENSRSLSRLGYYEMLLWVRVNNEEKIQELCNGIAADDGADKPN 308

Query: 305 LQENYLLALCGSEQKKELLQMLEVIDITKLSTTVVAPNIFKSLGRLSLHTFAEKSLLAFK 360
           L ENY+LALC S +K+ELL++LE+IDITK+S+     +IFKSLGRLSL +F EK + AFK
Sbjct: 309 LTENYVLALCESGRKEELLKVLEIIDITKVSSVDYVASIFKSLGRLSLASFMEKFVSAFK 347

The following BLAST results are available for this feature:

BLAST of CSPI03G23130 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP304_ARATH	9.5e-54	43.19	Pentatricopeptide repeat-containing protein At4g04790, mitochondrial OS=Arabidop...	[more]
PP335_ARATH	2.2e-42	39.91	Pentatricopeptide repeat-containing protein At4g21880, mitochondrial OS=Arabidop...	[more]

BLAST of CSPI03G23130 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L854_CUCSA	1.5e-202	99.73	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G415080 PE=4 SV=1	[more]
A0A061F5D3_THECC	6.4e-81	48.84	Tetratricopeptide repeat-like superfamily protein, putative isoform 2 OS=Theobro...	[more]
A0A061F6A5_THECC	6.4e-81	48.84	Tetratricopeptide repeat-like superfamily protein, putative isoform 4 OS=Theobro...	[more]
A0A0D2Q9M0_GOSRA	6.6e-78	46.15	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G082600 PE=4 SV=1	[more]
A0A0D2M8B9_GOSRA	6.6e-78	46.15	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G082600 PE=4 SV=1	[more]

BLAST of CSPI03G23130 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G04790.1	5.3e-55	43.19	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21880.1	1.2e-43	39.91	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of CSPI03G23130 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700202830\|gb\|KGN57963.1\|	2.1e-202	99.73	hypothetical protein Csa_3G415080 [Cucumis sativus]	[more]
gi\|778681163\|ref\|XP_011651464.1\|	2.4e-198	100.00	PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial ...	[more]
gi\|659109137\|ref\|XP_008454564.1\|	2.3e-172	88.65	PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial-...	[more]
gi\|659109139\|ref\|XP_008454565.1\|	3.8e-143	88.10	PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial-...	[more]
gi\|731432614\|ref\|XP_010644336.1\|	5.3e-89	51.67	PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial-...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G23130.1	CSPI03G23130.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 296..325 score: 4.6E-35coord: 151..260 score: 4.6
None	No IPR available	PANTHER	PTHR24015:SF623	SUBFAMILY NOT NAMED	coord: 151..260 score: 4.6E-35coord: 296..325 score: 4.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G23130	Csa3G415080	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G23130	MELO3C018129	Melon (DHL92) v3.5.1	cpimeB201
CSPI03G23130	MELO3C018128.2	Melon (DHL92) v3.6.1	cpimedB195
CSPI03G23130	CsaV3_3G022860	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G23130	Cucsa.267220	Cucumber (Gy14) v1	cgycpiB404
CSPI03G23130	CsGy3G022120	Cucumber (Gy14) v2	cgybcpiB110

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G23130	Cucurbita maxima (Rimu)	cmacpiB015
CSPI03G23130	Cucurbita maxima (Rimu)	cmacpiB460
CSPI03G23130	Cucurbita moschata (Rifu)	cmocpiB006
CSPI03G23130	Cucurbita moschata (Rifu)	cmocpiB448
CSPI03G23130	Watermelon (Charleston Gray)	cpiwcgB242
CSPI03G23130	Watermelon (97103) v1	cpiwmB247
CSPI03G23130	Cucurbita pepo (Zucchini)	cpecpiB549
CSPI03G23130	Cucurbita pepo (Zucchini)	cpecpiB779
CSPI03G23130	Bottle gourd (USVL1VR-Ls)	cpilsiB194
CSPI03G23130	Silver-seed gourd	carcpiB0939
CSPI03G23130	Silver-seed gourd	carcpiB1053
CSPI03G23130	Watermelon (97103) v2	cpiwmbB225
CSPI03G23130	Wax gourd	cpiwgoB351