CsGy3G022010 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G022010
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr3 : 20343412 .. 20343851 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAATAGAACAAATACCCTGAAAGTGGTTGAAATTCGTCAATTACTTTCTCTTCTTCTTCATCTTTCTCAAGCAAATCCTATTTCAATAGAGGTTCTCACCCAGCCAGACCTTCAACTTTTCGACTCTGAGGACGCCCAAACGACCGAAATTCTAATCCCAAAACTTGACAAAGAGTTAGAAATTTCAAATTCTGAGTGTAAAACTACAACCCCATATGAGAAAACAGAAGAAAAACAGAGGGTCTTTTGTTTCTGAAAAAGGTATCCAATGTGCCAAAAATCCCTAGAAAGATGATTATGCAGTGCAAATCTCCAACCCCATATGAGAAAACAGAGGAAAAAGAAAGGATTTTGGTCCTAAAAAATGACTCAATGAATCGATCCAAGGTGCTGAAAAGCCCTGCAAAGATGAATTTGGAGTGTAAAACTCCGATATAA

mRNA sequence

GAAAATAGAACAAATACCCTGAAAGTGGTTGAAATTCGTCAATTACTTTCTCTTCTTCTTCATCTTTCTCAAGCAAATCCTATTTCAATAGAGGTTCTCACCCAGCCAGACCTTCAACTTTTCGACTCTGAGGACGCCCAAACGACCGAAATTCTAATCCCAAAACTTGACAAAGAGTTAGAAATTTCAAATTCTGAGTGTAAAACTACAACCCCATATGAGAAAACAGAAGAAAAACAGAGGGTATCCAATGTGCCAAAAATCCCTAGAAAGATGATTATGCAGTGCAAATCTCCAACCCCATATGAGAAAACAGAGGAAAAAGAAAGGATTTTGGTCCTAAAAAATGACTCAATGAATCGATCCAAGGTGCTGAAAAGCCCTGCAAAGATGAATTTGGAGTGTAAAACTCCGATATAA

Coding sequence (CDS)

GAAAATAGAACAAATACCCTGAAAGTGGTTGAAATTCGTCAATTACTTTCTCTTCTTCTTCATCTTTCTCAAGCAAATCCTATTTCAATAGAGGTTCTCACCCAGCCAGACCTTCAACTTTTCGACTCTGAGGACGCCCAAACGACCGAAATTCTAATCCCAAAACTTGACAAAGAGTTAGAAATTTCAAATTCTGAGTGTAAAACTACAACCCCATATGAGAAAACAGAAGAAAAACAGAGGGTATCCAATGTGCCAAAAATCCCTAGAAAGATGATTATGCAGTGCAAATCTCCAACCCCATATGAGAAAACAGAGGAAAAAGAAAGGATTTTGGTCCTAAAAAATGACTCAATGAATCGATCCAAGGTGCTGAAAAGCCCTGCAAAGATGAATTTGGAGTGTAAAACTCCGATATAA

Protein sequence

ENRTNTLKVVEIRQLLSLLLHLSQANPISIEVLTQPDLQLFDSEDAQTTEILIPKLDKELEISNSECKTTTPYEKTEEKQRVSNVPKIPRKMIMQCKSPTPYEKTEEKERILVLKNDSMNRSKVLKSPAKMNLECKTPI
Homology
[Close]
BLAST of CsGy3G022010 vs. NCBI nr
Match: XP_011653365.1 (PREDICTED: uncharacterized protein LOC105435203 [Cucumis sativus] >KGN53676.1 hypothetical protein Csa_4G101270 [Cucumis sativus])

HSP 1 Score: 90.5 bits (223), Expect = 4.8e-15
Identity = 51/70 (72.86%), Postives = 58/70 (82.86%), Query Frame = 0 

Query: 30 IEVLTQPDLQLFDSEDAQTTEILIPKLDKELEISNSECKTTTPYEKTEEKQR------VS 89
          +E+LTQP LQL DSEDAQTT ILIP+LDKEL+ISNSE KTTTP+EKTEEKQR      VS
Sbjct: 1  MELLTQPHLQLSDSEDAQTTAILIPELDKELKISNSESKTTTPHEKTEEKQRIFVSEKVS 60

Query: 90 NVPKIPRKMI 94
           VPK PR++I
Sbjct: 61 KVPKSPRELI 70

[Close]
BLAST of CsGy3G022010 vs. NCBI nr
Match: KGN57958.1 (hypothetical protein Csa_3G409050 [Cucumis sativus])

HSP 1 Score: 84.7 bits (208), Expect = 2.7e-13
Identity = 57/115 (49.57%), Postives = 66/115 (57.39%), Query Frame = 0 

Query: 30  IEVLTQPDLQLFDSEDAQTTEILIPKLDKELEISNSE-----CKTTTPYEKTEEKQRVSN 89
           +EVL QP LQL DS+DAQTT ILI KLDKELEISNSE     CK+ TP EKTE+K+++  
Sbjct: 1   MEVLIQPHLQLSDSKDAQTTAILIQKLDKELEISNSEKMIMQCKSPTPEEKTEKKEKI-- 60

Query: 90  VPKIPRKMIXXXXXXXXXXXXXXXXXXXVLKNDSMNRSKVXXXXAKMNLECKTPI 140
                                       V KN+SM RSKV    AK+NLECKT I
Sbjct: 61  ---------------------------LVPKNESMKRSKVLKSLAKVNLECKTLI 86

[Close]
BLAST of CsGy3G022010 vs. NCBI nr
Match: XP_008462927.1 (PREDICTED: uncharacterized protein LOC103501189 [Cucumis melo])

HSP 1 Score: 80.5 bits (197), Expect = 5.0e-12
Identity = 46/68 (67.65%), Postives = 53/68 (77.94%), Query Frame = 0 

Query: 30 IEVLTQPDLQLFDSEDAQTTEILIPKLDKELEISNSECKTTTPYEKTEEKQRV------S 89
          +EVLT+  +QL DS+D+QT  ILIP+LDK+LEISNSECKTTTP EKTEEKQRV      S
Sbjct: 1  MEVLTRSHVQLSDSDDSQTAAILIPELDKKLEISNSECKTTTPDEKTEEKQRVFVPGKES 60

Query: 90 NVPKIPRK 92
           VPK P K
Sbjct: 61 KVPKSPTK 68

[Close]
BLAST of CsGy3G022010 vs. TrEMBL
Match: tr|A0A0A0L0M1|A0A0A0L0M1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G101270 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.2e-15
Identity = 51/70 (72.86%), Postives = 58/70 (82.86%), Query Frame = 0 

Query: 30 IEVLTQPDLQLFDSEDAQTTEILIPKLDKELEISNSECKTTTPYEKTEEKQR------VS 89
          +E+LTQP LQL DSEDAQTT ILIP+LDKEL+ISNSE KTTTP+EKTEEKQR      VS
Sbjct: 1  MELLTQPHLQLSDSEDAQTTAILIPELDKELKISNSESKTTTPHEKTEEKQRIFVSEKVS 60

Query: 90 NVPKIPRKMI 94
           VPK PR++I
Sbjct: 61 KVPKSPRELI 70

[Close]
BLAST of CsGy3G022010 vs. TrEMBL
Match: tr|A0A0A0L848|A0A0A0L848_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G409050 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.8e-13
Identity = 57/115 (49.57%), Postives = 66/115 (57.39%), Query Frame = 0 

Query: 30  IEVLTQPDLQLFDSEDAQTTEILIPKLDKELEISNSE-----CKTTTPYEKTEEKQRVSN 89
           +EVL QP LQL DS+DAQTT ILI KLDKELEISNSE     CK+ TP EKTE+K+++  
Sbjct: 1   MEVLIQPHLQLSDSKDAQTTAILIQKLDKELEISNSEKMIMQCKSPTPEEKTEKKEKI-- 60

Query: 90  VPKIPRKMIXXXXXXXXXXXXXXXXXXXVLKNDSMNRSKVXXXXAKMNLECKTPI 140
                                       V KN+SM RSKV    AK+NLECKT I
Sbjct: 61  ---------------------------LVPKNESMKRSKVLKSLAKVNLECKTLI 86

[Close]
BLAST of CsGy3G022010 vs. TrEMBL
Match: tr|A0A1S3CI15|A0A1S3CI15_CUCME (uncharacterized protein LOC103501189 OS=Cucumis melo OX=3656 GN=LOC103501189 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.3e-12
Identity = 46/68 (67.65%), Postives = 53/68 (77.94%), Query Frame = 0 

Query: 30 IEVLTQPDLQLFDSEDAQTTEILIPKLDKELEISNSECKTTTPYEKTEEKQRV------S 89
          +EVLT+  +QL DS+D+QT  ILIP+LDK+LEISNSECKTTTP EKTEEKQRV      S
Sbjct: 1  MEVLTRSHVQLSDSDDSQTAAILIPELDKKLEISNSECKTTTPDEKTEEKQRVFVPGKES 60

Query: 90 NVPKIPRK 92
           VPK P K
Sbjct: 61 KVPKSPTK 68

The following BLAST results are available for this feature:
BLAST of CsGy3G022010 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011653365.14.8e-1572.86PREDICTED: uncharacterized protein LOC105435203 [Cucumis sativus] >KGN53676.1 hy... [more]
KGN57958.12.7e-1349.57hypothetical protein Csa_3G409050 [Cucumis sativus][more]
XP_008462927.15.0e-1267.65PREDICTED: uncharacterized protein LOC103501189 [Cucumis melo][more]
BLAST of CsGy3G022010 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy3G022010 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy3G022010 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L0M1|A0A0A0L0M1_CUCSA3.2e-1572.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G101270 PE=4 SV=1[more]
tr|A0A0A0L848|A0A0A0L848_CUCSA1.8e-1349.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G409050 PE=4 SV=1[more]
tr|A0A1S3CI15|A0A1S3CI15_CUCME3.3e-1267.65uncharacterized protein LOC103501189 OS=Cucumis melo OX=3656 GN=LOC103501189 PE=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G022010.1CsGy3G022010.1mRNA