CsGy3G020540 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCGAACATATCTGCTACACTCGAACGGCTACGGACGAATGACTCCACGCAAATGTCAGGATATGGGTATAGAACCTACAATACTCATCAGCACGAAATTGGGTGATTTTAATAACGTATGTCGAAGAATCACATCAGCTATAGAGCATCCTCATTTAAGCATCCCTGAAAATGAGGCAGGCAGAAGCCGCAAGCATTATCACAAGCTCAAAAACCACTCTCTTATGTTTGTTTCAGGTATGTTGATTTATATAGTTTTCCCCTCATTCATATCAACATGAAAAACCTACTTGGTAATAAACATTAACATGTACTGCTATGTATGACAGTTTTTGCTTCATTGGATGGTTGCATAAATGAGTCTGTCATCCCACCGATTACTTGTTTTTCAGAAAGGATGTTTTTAAGTATAAAGAGGTAG ATGAAGCGAACATATCTGCTACACTCGAACGGCTACGGACGAATGACTCCACGCAAATGTCAGGATATGGGTATAGAACCTACAATACTCATCAGCACGAAATTGGGTGATTTTAATAACGTATGTCGAAGAATCACATCAGCTATAGAGCATCCTCATTTAAGCATCCCTGAAAATGAGGCAGGCAGAAGCCGCAAGCATTATCACAAGCTCAAAAACCACTCTCTTATGTTTGTTTCAGTTTTTGCTTCATTGGATGGTTGCATAAATGAGTCTGTCATCCCACCGATTACTTGTTTTTCAGAAAGGATGTTTTTAAGTATAAAGAGGTAG ATGAAGCGAACATATCTGCTACACTCGAACGGCTACGGACGAATGACTCCACGCAAATGTCAGGATATGGGTATAGAACCTACAATACTCATCAGCACGAAATTGGGTGATTTTAATAACGTATGTCGAAGAATCACATCAGCTATAGAGCATCCTCATTTAAGCATCCCTGAAAATGAGGCAGGCAGAAGCCGCAAGCATTATCACAAGCTCAAAAACCACTCTCTTATGTTTGTTTCAGTTTTTGCTTCATTGGATGGTTGCATAAATGAGTCTGTCATCCCACCGATTACTTGTTTTTCAGAAAGGATGTTTTTAAGTATAAAGAGGTAG MKRTYLLHSNGYGRMTPRKCQDMGIEPTILISTKLGDFNNVCRRITSAIEHPHLSIPENEAGRSRKHYHKLKNHSLMFVSVFASLDGCINESVIPPITCFSERMFLSIKR
BLAST of CsGy3G020540 vs. NCBI nr
Match: KGN57777.1 (hypothetical protein Csa_3G298060 [Cucumis sativus]) HSP 1 Score: 202.6 bits (514), Expect = 6.9e-49 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of CsGy3G020540 vs. NCBI nr
Match: XP_004139182.2 (PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis sativus] >KGN60899.1 hypothetical protein Csa_2G021700 [Cucumis sativus]) HSP 1 Score: 111.7 bits (278), Expect = 1.6e-21 Identity = 56/68 (82.35%), Postives = 58/68 (85.29%), Query Frame = 0
BLAST of CsGy3G020540 vs. NCBI nr
Match: XP_008454749.1 (PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis melo] >ABR67417.1 ATP/GTP/Ca++ binding protein [Cucumis melo subsp. melo]) HSP 1 Score: 111.7 bits (278), Expect = 1.6e-21 Identity = 56/68 (82.35%), Postives = 58/68 (85.29%), Query Frame = 0
BLAST of CsGy3G020540 vs. NCBI nr
Match: XP_022946756.1 (mitochondrial Rho GTPase 1-like [Cucurbita moschata]) HSP 1 Score: 105.5 bits (262), Expect = 1.1e-19 Identity = 53/67 (79.10%), Postives = 55/67 (82.09%), Query Frame = 0
BLAST of CsGy3G020540 vs. NCBI nr
Match: XP_022999265.1 (mitochondrial Rho GTPase 1-like [Cucurbita maxima]) HSP 1 Score: 105.5 bits (262), Expect = 1.1e-19 Identity = 53/67 (79.10%), Postives = 55/67 (82.09%), Query Frame = 0
BLAST of CsGy3G020540 vs. TAIR10
Match: AT5G27540.1 (MIRO-related GTP-ase 1) HSP 1 Score: 95.1 bits (235), Expect = 2.8e-20 Identity = 44/67 (65.67%), Postives = 55/67 (82.09%), Query Frame = 0
BLAST of CsGy3G020540 vs. TAIR10
Match: AT3G63150.1 (MIRO-related GTP-ase 2) HSP 1 Score: 65.9 bits (159), Expect = 1.8e-11 Identity = 30/64 (46.88%), Postives = 45/64 (70.31%), Query Frame = 0
BLAST of CsGy3G020540 vs. TAIR10
Match: AT3G05310.1 (MIRO-related GTP-ase 3) HSP 1 Score: 61.6 bits (148), Expect = 3.5e-10 Identity = 33/64 (51.56%), Postives = 45/64 (70.31%), Query Frame = 0
BLAST of CsGy3G020540 vs. Swiss-Prot
Match: sp|Q8RXF8|MIRO1_ARATH (Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana OX=3702 GN=MIRO1 PE=1 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 5.1e-19 Identity = 44/67 (65.67%), Postives = 55/67 (82.09%), Query Frame = 0
BLAST of CsGy3G020540 vs. Swiss-Prot
Match: sp|F4J0W4|MIRO2_ARATH (Mitochondrial Rho GTPase 2 OS=Arabidopsis thaliana OX=3702 GN=MIRO2 PE=2 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 3.3e-10 Identity = 30/64 (46.88%), Postives = 45/64 (70.31%), Query Frame = 0
BLAST of CsGy3G020540 vs. Swiss-Prot
Match: sp|Q9MA88|MIRO3_ARATH (Mitochondrial Rho GTPase 3 OS=Arabidopsis thaliana OX=3702 GN=MIRO3 PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 6.2e-09 Identity = 33/64 (51.56%), Postives = 45/64 (70.31%), Query Frame = 0
BLAST of CsGy3G020540 vs. TrEMBL
Match: tr|A0A0A0LAS5|A0A0A0LAS5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298060 PE=4 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 4.6e-49 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of CsGy3G020540 vs. TrEMBL
Match: tr|A0A1S3BYW1|A0A1S3BYW1_CUCME (Mitochondrial Rho GTPase OS=Cucumis melo OX=3656 GN=LOC103495076 PE=3 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.1e-21 Identity = 56/68 (82.35%), Postives = 58/68 (85.29%), Query Frame = 0
BLAST of CsGy3G020540 vs. TrEMBL
Match: tr|A6YTD0|A6YTD0_CUCME (Mitochondrial Rho GTPase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.1e-21 Identity = 56/68 (82.35%), Postives = 58/68 (85.29%), Query Frame = 0
BLAST of CsGy3G020540 vs. TrEMBL
Match: tr|A0A0A0LIM9|A0A0A0LIM9_CUCSA (Mitochondrial Rho GTPase OS=Cucumis sativus OX=3659 GN=Csa_2G021700 PE=3 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.1e-21 Identity = 56/68 (82.35%), Postives = 58/68 (85.29%), Query Frame = 0
BLAST of CsGy3G020540 vs. TrEMBL
Match: tr|A0A1Q3B5G5|A0A1Q3B5G5_CEPFO (Mitochondrial Rho GTPase OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_06689 PE=3 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 8.4e-19 Identity = 52/68 (76.47%), Postives = 55/68 (80.88%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |