CsGy3G019330 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGGGGCTCAAGGTTTAGATAATAAAAATGAATGGTTGCCAGTGAGTTGACTTGCACCCTACTTAATTGGGAAGCTTAAGATTTGAGGTTTTAGTTTTTCATTCTTTTCTTTCTTTTCCCTTTGAGGTATGCCACTTTTTATCTGGGCTAAGGGATTTTGTTTATAGTTTGAGCTATACCGATTTGTGGTTCATTTTTCATTTATATTTTGGATGCAGCGTTGCATAGTTCTTGATATTGAAGGGACTACTACTCCAATCTCTTTTGTTACCGATGTCCTCTTTCCATATGCTCGTGATAATGTTGAAAAGCATTTGATTTTAACATATGAAACTGGAGAAACTCAAGATGACATCAAGTTGTTGCGTTCACAAGTAAGATTGTTTTATTATGTTGCAATCAGTAGAATGTTTATTCTGTCTGTACTTTACACTACTTACCTGTGCCTTGCAAGTCTTAATTAAACCAGAAAACAGCCTGCCTGCCATGGTAGTTGAGAGGCTATCTGGGAGTTGTCTCTTGAATTTTATGTTTATCAACAAAAATCTTTTTAGGTTGAAGAAGACTTGGAAAAAGGAGTTGCTGGAGCTGTGCCTATTCCTCCTGATAATGCTGGGAAAGAGGAAGTCATTGCAGCAGTGGTTGGTAATGTTGAAGGAATGATAAAAGCTGACCGCAAGATAACTGCCTTGAAACAATTGCAGGTAAGCAAGTAAAAATAATTCTCTAATTATCTTACTGCAATTCATTTGGCAGATTTTCTGAGTGAGCTGACTTCTAGCTATGCAGGGTCACATATGGAGAACAGGATTTTCAGTCAATGAATTGGAGGGAGTAGTTTTTGACGATGTGCCAGAGGCTCTTGAGAGATGGCATGCTTCGGGCATTAAGGTAATTCTCTCTCCCCTCTTGATTCTTGTTAAAACCTGTACAAGTTGCTATTTGAGATTAACTAGGGAAAGATCCTCCAATGCTCTTATTCCCACACTAGATTAGTTGTTACTAGATTAGACCTAACTATCACTAGAGGGCCGTTCGGAGCACCAACTAGAAGTTGGTTAAACGGGTTATTGTAGTTCACTCCATGTTTGAGGTACCAACTATAATATCGGTTTGTACAACTATTTATAATTTACAATTAAATATAGTAAATACTATTTCAAAACCCTTATTGCTAAAGTATTTACTATTGTCTCATCTTCTATTTTCTTCTTTGCTATAGTGTTTACTATTTCCTATCCAAATAAAAATAGTTTATATCCAAACACAAACTATTATAATCTAGACTAAAATAGTATTGCACCCCAAAAGACTAACTATTATAACCTATGGATTATTAGAACTTAATGACTATAATAACTATTCACTATAACAACTAAACATCCTAAACGCCCCTAGATGTTTAGATCCCGACCCAAATCTTGCTTTAATAGAAAAAAATCCCAACTTTTTTCAACAAATTATTGGCCCAGGTGGGGAAGAGATGATGTAATTACCAATAAGATCAAAATTATTTGAATCTTTCTTGATTTCTTCCAATTCAGTGATTCAAGATTTGAATCCAGTCCTTTAAATCACATTGGTATGTAGAGAAGACTAAACACAAGCTTACTTAAATCACTTTGAGGCGGAATTTTTGCAGATGTGCTTCAATTTTCCTCACAATGGAATCTATTTAGGGAAAACTACATTAGTTTATTAGACGAGAGTCTGAGACGGATGATTTTATAAATGAGTTAGAAGATGACAGCCCTGTCTCATAAAAGATGACTTGTGATTGATTTGCCTTCATTAAGAGGATCTCCCAACTAGAATTAAGAATGCAAGGCCCCTAGTTAGGAAAATAGTAGAATTATTAGTAGAATAATTGAATCGATTTGAGGAGGGCATATTAGCAATTAGCTAGTAAGTTGGTTAGGCTATTTTGCTATAAGTAGGAGAGGGGTCGGGTGGAAAATTTTGAGTTGAAGAAGCTGTTTGGGAGAAGGAGATGCTCTAGAATGTGCCGATGTCTTTTCCTTTTGTTTATCCTTCTGCTCTTGTTCTTTTCTCTATGAACTTGTTGCTTAGGGAAGTCTTAAGAGCTTGTTTGTTCTGTGCTTGACTCATCTGAGGTTATCTGGAAATATATTGCCATTGTGGCTTGTTGTTCTTGTCTCTTGTTGCCTATTTTCTGAGTGCAGGGATTAGATGCCTAACAAACATCTGGAATATATTGAAAAATAAAGAAACAACTACGAGATCACTCCACAAATTCTCCCCATACTAACTAGTCACTCACCCTCCTATTTATAACAAGATTCACCAACTTCCAATCTAATTACCCTTGTAACCCATACTAATATTCTTATCTAGTACCTTACAGAAGTCTAGTGATATTTGAACAAAATTTCTCCAACAGATATAATAAACAAAGAATAACTTCTAGTATTTCTGACATGAACAGGTGTACATATACTCGAGCGGCAGCAGGTTGGCACAAAGGCTCATATTTGGAAAGACTAATTATGGTGATCTAAGAAAATACCTATCAGGATTCTTTGACACTGCTGTGGGGTAAGCAATTGCTGCTATTTTGTTTTCCATTTTTTAATCATACTCAATATCACAAACATGATGGTGGAACTGCTCTTGTATCTCAGGAACAAAAGAGAAACAAGCAGTTATGTTGAGATCTCAGAATCTGTTGGAGTTGATTCACCATCAGAGATATTGTTCATCACAGATGTCTGTCAGGAAGCTAAAGCAGCAAAAGCAGCAGGTAATGAGTCTACTTTAAGCTATTCTTTGTTCCTTAAATGTAAAGAAAACGAATAAAATCCATTCCTGCTGTAACCGAACTGCATTTGGCTGAAGTTCTTTCTAAAACGATCATATAAAATTCCAAAAGAATTGCAAAATTACTAATTTTATACTTATTCGAATGCGAACTACAACGACGTTTCAGGGCTGCAGGTGGCAATCTCAATCCGACCAGGAAATGGTCCATTGTCTGACAATCACGGATTCCAGACAATCACTTCCTTCTCAGAAATCTGAAATGAGAAACTACATTTTGTAATTACATCCAAAGAATCCTGAAAATGATCAATAACATCACAGCTTGACAATTTTACCCTGAGAGACTGTTCCATTCAGCAAGTTTCCCCTATTTACTCCCTCTCTCGGCGATTGTTGTTCAAAGTTTAAACTGA ATGCTGGGGCTCAAGCGTTGCATAGTTCTTGATATTGAAGGGACTACTACTCCAATCTCTTTTGTTACCGATGTCCTCTTTCCATATGCTCGTGATAATGTTGAAAAGCATTTGATTTTAACATATGAAACTGGAGAAACTCAAGATGACATCAAGTTGTTGCGTTCACAAGTTGAAGAAGACTTGGAAAAAGGAGTTGCTGGAGCTGTGCCTATTCCTCCTGATAATGCTGGGAAAGAGGAAGTCATTGCAGCAGTGGTTGGTAATGTTGAAGGAATGATAAAAGCTGACCGCAAGATAACTGCCTTGAAACAATTGCAGGTAAGCAAGTGGGGAAGAGATGATGTGTACATATACTCGAGCGGCAGCAGGTTGGCACAAAGGCTCATATTTGGAAAGACTAATTATGGTGATCTAAGAAAATACCTATCAGGATTCTTTGACACTGCTGTGGGGAACAAAAGAGAAACAAGCAGTTATGTTGAGATCTCAGAATCTGTTGGAGTTGATTCACCATCAGAGATATTGTTCATCACAGATGTCTGTCAGGAAGCTAAAGCAGCAAAAGCAGCAGCAAGTTTCCCCTATTTACTCCCTCTCTCGGCGATTGTTGTTCAAAGTTTAAACTGA ATGCTGGGGCTCAAGCGTTGCATAGTTCTTGATATTGAAGGGACTACTACTCCAATCTCTTTTGTTACCGATGTCCTCTTTCCATATGCTCGTGATAATGTTGAAAAGCATTTGATTTTAACATATGAAACTGGAGAAACTCAAGATGACATCAAGTTGTTGCGTTCACAAGTTGAAGAAGACTTGGAAAAAGGAGTTGCTGGAGCTGTGCCTATTCCTCCTGATAATGCTGGGAAAGAGGAAGTCATTGCAGCAGTGGTTGGTAATGTTGAAGGAATGATAAAAGCTGACCGCAAGATAACTGCCTTGAAACAATTGCAGGTAAGCAAGTGGGGAAGAGATGATGTGTACATATACTCGAGCGGCAGCAGGTTGGCACAAAGGCTCATATTTGGAAAGACTAATTATGGTGATCTAAGAAAATACCTATCAGGATTCTTTGACACTGCTGTGGGGAACAAAAGAGAAACAAGCAGTTATGTTGAGATCTCAGAATCTGTTGGAGTTGATTCACCATCAGAGATATTGTTCATCACAGATGTCTGTCAGGAAGCTAAAGCAGCAAAAGCAGCAGCAAGTTTCCCCTATTTACTCCCTCTCTCGGCGATTGTTGTTCAAAGTTTAAACTGA MLGLKRCIVLDIEGTTTPISFVTDVLFPYARDNVEKHLILTYETGETQDDIKLLRSQVEEDLEKGVAGAVPIPPDNAGKEEVIAAVVGNVEGMIKADRKITALKQLQVSKWGRDDVYIYSSGSRLAQRLIFGKTNYGDLRKYLSGFFDTAVGNKRETSSYVEISESVGVDSPSEILFITDVCQEAKAAKAAASFPYLLPLSAIVVQSLN
BLAST of CsGy3G019330 vs. NCBI nr
Match: XP_011651293.1 (PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 [Cucumis sativus] >KGN57627.1 hypothetical protein Csa_3G233480 [Cucumis sativus]) HSP 1 Score: 333.2 bits (853), Expect = 6.4e-88 Identity = 182/214 (85.05%), Postives = 182/214 (85.05%), Query Frame = 0
BLAST of CsGy3G019330 vs. NCBI nr
Match: XP_008456025.1 (PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 isoform X1 [Cucumis melo]) HSP 1 Score: 326.2 bits (835), Expect = 7.9e-86 Identity = 179/212 (84.43%), Postives = 179/212 (84.43%), Query Frame = 0
BLAST of CsGy3G019330 vs. NCBI nr
Match: XP_008456026.1 (PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 isoform X2 [Cucumis melo]) HSP 1 Score: 326.2 bits (835), Expect = 7.9e-86 Identity = 179/212 (84.43%), Postives = 179/212 (84.43%), Query Frame = 0
BLAST of CsGy3G019330 vs. NCBI nr
Match: XP_022923004.1 (probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 isoform X1 [Cucurbita moschata] >XP_022923005.1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 isoform X1 [Cucurbita moschata] >XP_022923006.1 probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 isoform X1 [Cucurbita moschata]) HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80 Identity = 171/214 (79.91%), Postives = 174/214 (81.31%), Query Frame = 0
BLAST of CsGy3G019330 vs. NCBI nr
Match: XP_022923008.1 (probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 isoform X3 [Cucurbita moschata]) HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80 Identity = 171/214 (79.91%), Postives = 174/214 (81.31%), Query Frame = 0
BLAST of CsGy3G019330 vs. TAIR10
Match: AT5G53850.2 (haloacid dehalogenase-like hydrolase family protein) HSP 1 Score: 258.5 bits (659), Expect = 3.7e-69 Identity = 138/213 (64.79%), Postives = 162/213 (76.06%), Query Frame = 0
BLAST of CsGy3G019330 vs. Swiss-Prot
Match: sp|E0CSI1|MTBC1_VITVI (Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 OS=Vitis vinifera OX=29760 GN=VIT_19s0014g02480 PE=3 SV=2) HSP 1 Score: 285.8 bits (730), Expect = 3.9e-76 Identity = 153/213 (71.83%), Postives = 167/213 (78.40%), Query Frame = 0
BLAST of CsGy3G019330 vs. Swiss-Prot
Match: sp|B9SQI7|MTBC_RICCO (Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Ricinus communis OX=3988 GN=RCOM_0591060 PE=3 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 4.3e-75 Identity = 156/217 (71.89%), Postives = 165/217 (76.04%), Query Frame = 0
BLAST of CsGy3G019330 vs. Swiss-Prot
Match: sp|B9N1F9|MTBC_POPTR (Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Populus trichocarpa OX=3694 GN=POPTR_0001s40980g PE=3 SV=2) HSP 1 Score: 277.3 bits (708), Expect = 1.4e-73 Identity = 150/214 (70.09%), Postives = 165/214 (77.10%), Query Frame = 0
BLAST of CsGy3G019330 vs. Swiss-Prot
Match: sp|B8BKI7|MTBC_ORYSI (Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_36120 PE=2 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 1.0e-68 Identity = 141/213 (66.20%), Postives = 159/213 (74.65%), Query Frame = 0
BLAST of CsGy3G019330 vs. Swiss-Prot
Match: sp|Q2R483|MTBC_ORYSJ (Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0484000 PE=2 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 1.0e-68 Identity = 141/213 (66.20%), Postives = 159/213 (74.65%), Query Frame = 0
BLAST of CsGy3G019330 vs. TrEMBL
Match: tr|A0A0A0LAF4|A0A0A0LAF4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G233480 PE=4 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 4.3e-88 Identity = 182/214 (85.05%), Postives = 182/214 (85.05%), Query Frame = 0
BLAST of CsGy3G019330 vs. TrEMBL
Match: tr|A0A1S3C2D2|A0A1S3C2D2_CUCME (probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496078 PE=4 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 5.2e-86 Identity = 179/212 (84.43%), Postives = 179/212 (84.43%), Query Frame = 0
BLAST of CsGy3G019330 vs. TrEMBL
Match: tr|A0A1S3C1U6|A0A1S3C1U6_CUCME (probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496078 PE=4 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 5.2e-86 Identity = 179/212 (84.43%), Postives = 179/212 (84.43%), Query Frame = 0
BLAST of CsGy3G019330 vs. TrEMBL
Match: tr|A0A2C9UE23|A0A2C9UE23_MANES (Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Manihot esculenta OX=3983 GN=MANES_15G087800 PE=3 SV=1) HSP 1 Score: 289.7 bits (740), Expect = 5.4e-75 Identity = 158/214 (73.83%), Postives = 168/214 (78.50%), Query Frame = 0
BLAST of CsGy3G019330 vs. TrEMBL
Match: tr|A0A2I4H3G3|A0A2I4H3G3_9ROSI (Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Juglans regia OX=51240 GN=LOC109013151 PE=3 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 9.2e-75 Identity = 156/214 (72.90%), Postives = 169/214 (78.97%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|