CmaCh16G003990 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGGGCAGTGAAGGTATATCCGTTCTCTATCCTTCTTCTCTGATCTCTGTTGAATCACTCAAATGGCGATGGCTTCACCTCTGGCCGTCAATGGAGTCAAGTTGGCTACGACTTCTCTAGCTTATGTGGACACCAAGGCTGCAAACAATACGAAGGCTCTGATGGCGGAGCTTTCCCGCCAATTCTACGGCCTCCGATTGGTTTCCAGCCCCGCCGGTAGCATTGCCATCAAGGTTCACGACCACTCCATTCCCAAGGGACAACACACAATCTCTTTGTCACATTCCGGTGAGAATTTCTCCATCTTTCTCTTTCTAATTCAGTTCCTTGGGAATGTGATTTTCCTTTAGTCTTTTTGGTGTAGAATTTTTTTTTATTATGGTAATTCCTTCTGCTTCAGTCTTTTTGGCTGTTTGTAACTGCCGTATGAATATGGCTAGGCGTCGTTGTAATTCAAACTAGTTCTTGTTGGGAGGATATCCAATTTACCCTTCTCTTTGCAGAAGAAGATGATCTTAATGGTTCACGCCATCAAGAACTATAGCATAAGATCACCTGTTTTTTTGTTTGGCAAGAGTATAAAGGGCTTTGAATTCACGGATTTAGATGAATTTTCTTTTGCTTTTGTTTGATTATACACAGGTGTTAAGAAGGAGAGAATGCTCGCGGAGGACACCTGCATGTTATCTTATGGTGGGTCAATCTTATATTCACCACCTCCAAAGCCATTTTCTCACAAGCTCCCGAACTGTTTGGATGGTAGACCTCTTTTTATGAAGGTATAGTTCCCTGCATAAGAGTATAATCAACTTGTGATGAATAGAAAATACATAGTTATGCTATAAATGAGCTAATGTTCATATAAGCAATGTCTCCTATACCTCGAGACATTAACTTCACTGATCTTTGCATGATCGACCAACCTTTTTCGTTCTTATTTGATTGCCAAATCCATCCACCACAACCAAATTTGTGTTTCTTATTAAAAACAGCAACAATAACTATTGTTGTGGCATTACTTTAAGTTAGGAGAAGGTTTTGTTTTGTTATTTTGGGTAAATCTCAAACTTATTCAGCATTGTATGTGCCTTTTCTTATCGTCCCGTTTTATTTGATAGAAACCTTCGAATGAGAAGTTCCTTTGAGCTTTGTAGATGATGAAACCTCTGATTTTAAACAGTTTCAAGAAATTGATTTTGGGTCTGTCTTGCTTTCATTCGGTCTCAGTAATCAATAACTTAATTTTACAGGCTGATTGTTGTCACTATCTCTTTGATGCTGCTATTAAGCTTCGTCAACTAGGCATTGATTAGTCTTCTCCAACTCAGGATCCTTTCGGGAGCATCAAAGGAATTTCAAGCAAAATTTCTGTGAAGGCTGGGGCTCAAGGTTTAAATAATGAAAACAAACCATTGCCAGTGAGTTGAAGTGCATTTTGTTTAATTGGGAAGCTTAAAGTTTTAGCCTTTGATTTTTCATTCTTTTCTTTTACCTTTGAGGTATATCATTTTTGTATCTGGGTTAGGAATCTTCTTTTCAATTGTGGTTCATTTCTCATTTATATTTTCGATGCAGCGTTGCATAGTTCTTGATATCGAAGGGACTACTACTCCAATATCTTTTGTTACTGACATACTCTTTCCATATGCTCGTGATAACGTTGGAAAGCATTTGATTTTAACGTATGAAACTGCAGAAACCCAAGATGACATTATGTTATTGCGTTCACAAGTAAGATATTTTGGTTCAACAGTATTTTGATTATGTTGCAGTCTGTAGAATGTCTACGATCTATTTACGGTATTTATTTGAGCATTGTTAGTTAAACAGGAATAGCGTGTGCGTTCATGAGTTAATATGTGATACAGAAATCTCCTCCTACCAGTAAATTCAATTTGTTTGAGATCTCACATCGGTTGGAGAGGAGAACGAAACACCCTTTACAAGGGTGTGGAAATTTCTCCTAGCAGACGTGTTTTAAAAACCTTGAGGGTAAGCCCGAAAGGAAAAGCCCAAAGAGAACAATATCTGCTAGCGGTGGGCTTGGGTTGTTAGAAATGATATTAGAGTCAGACACCAAGCAATGTGACAGCAAGGAGGCTGAGCCCCGAAGGGGGTGGACATGAGGCAATGTGCCAACAAAGATGTTGGGCCCCAAAGGGGTGGATTTAGTGGGGGTCCCACATCGATTGGAGAAAGGAACGAGTGCCAGCGAGGATGCTGGGCTCGGAAGGGGGGTGGATTGTGAGATCTCACATCGGTTGAGGAGGAGAACGAAACGCCTTTTATAAGGGTGTGGAAACTTCTCCTTAGAAGACGCGTTTTAAAAACCTTGAAAGGAAGTCCGAAAGGGAAAGCTCAAAAAGGATAATATCTACTAGCGGTGAGCTTGAACGGTTAGAATTTGGTACTTGAGAGGCTATTTGGGATTTGTTTTCACAATTTTCTGTTCCAGATTCAGAGAAAATATGTTTGGATAACCAAATTCTAAAAGTTCTAAATTTTCTGATGAATCACTACGTCGTTGATGTGAGCATTTATCAATAAAACTGTGTTTCAGGTTGAAGAAGATTTGAAAAAAGGTGTCGCTGAAGCTGTGCCCGTCCCTCCTGATAATGCTGGGAAAGAGGAAGTCATTGCAGCATTGGTTGCTAATGTTGAAGCAATGATAAAAGCTGACCGCAAGATAGCTGCCTTGAAACAATTGCAAGTATGCAAGTAAAATGATTCTCAATTTATCTTACTACAATTCATTTGGCAGATTTTCTGAGTGAGCTGACTTCTAGCTATGCAGGGTCACATATGGAGAACAGGATTTTCAGGGAATGAATTGGAGGGAATAGTTTTTGATGATGTGCCAGAGGCTCTTGAGAGATGGCATGCTTTGGGCATTAAGGTTGTTCCCTTCCACCTCTTGATTCTTGCTAAAATCAGTACAAGTTTCTATTTGAGATTAAGTAGGAAAAGGTCTTCTCAATGTTCTAACTCCCGCGCTGGACCAGATGTAGACTGAACTATCTTGGGATGTTCAAAATCCAACTCGCCTCTTGCTTTAAAGGAAGAATGATCACGTACAGTTTCCTGAGAAGGGAGTGGCTACCTATTGGAGCTTCGACTGACTACCATCAGTCAATTCGACTTTGGGGCCACAACCTTTTTCTAACCCAAGTGACGAAGAAATGATGTGATTACTACTAAAATAAAAACGATATTTATTGATCTCTCTTAATTCAACAATCTAAGATTTGAATGGATGTCCTTTGAGTCCTCCAAAATTGCATTGATGCGTGGAGAAAGACTAAACTTAAGCATACTTGAGTCACTTTGAAGAAAAATTTTTGCAGATGTGTTCGAAGTGTTCCTCACAACATATTTAGAAAAGTGTAACGGCCCAAGCCTACCGCTAGCAAATATTGTCCTCTTTGAGCTTTCCCTTTTGAGCTTCCCCTCAAAATTTTTAAAACGCGTCTATTAGGAAGAGATTTCCACATTCTTATAAAGAATGTTTTATTCTCCTCTCCAACCGATGTGAGCTATGACAGAAAGATTAAACTCAGTTACTAAACTCAGTTATTAGATGAGACATATGATTTCATATTTGAGTTAGTAGTGACAGACCTGTCTAATAATAGATGTCGTGTGATTGATTTCCCTTCATTCTCATTTGGAATCCTGGTGATAATTGACCAAAAGTTCTCTGAGTCTCCGACAGACATTACGAACCAGTAATAACTTATATCGTTTCTGGCATGAACAGGTCTACATATACTCGAGCGGAAGCAGGTTGGCACAAAGGCTTATATTCGGAAAGACTAATTATGGTGATCTAAGAAAATACTTATCAGGATTCTTTGACACTGCTGTGGGGTAACCAATTTCTGTTCTTTTCATGTTATAATCATACTCGATATCACGAACATGATGGTGGAACTGCTCTTGTATCTCAGGAACAAAAGAGAAATAAGGAGTTATGTTGAGATTTCAGAGTCTCTTGGAGTTGATACACCATCAGAGATCCTGTTCATCACAGATGTCTATCAGGAAGCTGTAGCAGCAAAAGCAGCAGGTAGAGTCTCTCTACTTTTAGCTATTCTTTGCTGTTAGTTTTGGACGAAAAATTAGTAGAACCCGTTCGTGCTATATCGGAACTGCATTTGGCCAAAACGAAGTTCTTGTGACAAACTATCATATGGAGCTTCAAAAGAATTGCAGATTTACTTGTTTCATACTTGTTCAAATGCAATCCACGACGTTTCAGGGCTGCAGGTGGCCATCTCAATCCGACCAGGAAATGGTCCACTGCCTGATGATCATGGGTTCCAGACTGCCACTTCCTTCTCAGACATCACAGCTTGAGAGACTGTTCCAAGTAAGTTTAGCCTATTTTCTCCCATCTCTGCTAGTGATTGCTTAAAGTTTAAACTGAAGAAATATATATATATATAGCTGTACTTAATCTTGTCCTGGTCAAGCCTATGCAATAAAACTGAGTTCCAAATGAGTTTTTTGCTTCTGAA AGGGCAGTGAAGGTATATCCGTTCTCTATCCTTCTTCTCTGATCTCTGTTGAATCACTCAAATGGCGATGGCTTCACCTCTGGCCGTCAATGGAGTCAAGTTGGCTACGACTTCTCTAGCTTATGTGGACACCAAGGCTGCAAACAATACGAAGGCTCTGATGGCGGAGCTTTCCCGCCAATTCTACGGCCTCCGATTGGTTTCCAGCCCCGCCGGTAGCATTGCCATCAAGGTTCACGACCACTCCATTCCCAAGGGACAACACACAATCTCTTTGTCACATTCCGGTGTTAAGAAGGAGAGAATGCTCGCGGAGGACACCTGCATGTTATCTTATGGTGGGTCAATCTTATATTCACCACCTCCAAAGCCATTTTCTCACAAGCTCCCGAACTGTTTGGATGGTAGACCTCTTTTTATGAAGGATCCTTTCGGGAGCATCAAAGGAATTTCAAGCAAAATTTCTGTGAAGGCTGGGGCTCAAGGTTTAAATAATGAAAACAAACCATTGCCACGTTGCATAGTTCTTGATATCGAAGGGACTACTACTCCAATATCTTTTGTTACTGACATACTCTTTCCATATGCTCGTGATAACGTTGGAAAGCATTTGATTTTAACGTATGAAACTGCAGAAACCCAAGATGACATTATGTTATTGCGTTCACAAGTTGAAGAAGATTTGAAAAAAGGTGTCGCTGAAGCTGTGCCCGTCCCTCCTGATAATGCTGGGAAAGAGGAAGTCATTGCAGCATTGGTTGCTAATGTTGAAGCAATGATAAAAGCTGACCGCAAGATAGCTGCCTTGAAACAATTGCAAGGTCACATATGGAGAACAGGATTTTCAGGGAATGAATTGGAGGGAATAGTTTTTGATGATGTGCCAGAGGCTCTTGAGAGATGGCATGCTTTGGGCATTAAGGTCTACATATACTCGAGCGGAAGCAGGTTGGCACAAAGGCTTATATTCGGAAAGACTAATTATGGTGATCTAAGAAAATACTTATCAGGATTCTTTGACACTGCTGTGGGGAACAAAAGAGAAATAAGGAGTTATGTTGAGATTTCAGAGTCTCTTGGAGTTGATACACCATCAGAGATCCTGTTCATCACAGATGTCTATCAGGAAGCTGTAGCAGCAAAAGCAGCAGGGCTGCAGGTGGCCATCTCAATCCGACCAGGAAATGGTCCACTGCCTGATGATCATGGGTTCCAGACTGCCACTTCCTTCTCAGACATCACAGCTTGAGAGACTGTTCCAAGTAAGTTTAGCCTATTTTCTCCCATCTCTGCTAGTGATTGCTTAAAGTTTAAACTGAAGAAATATATATATATATAGCTGTACTTAATCTTGTCCTGGTCAAGCCTATGCAATAAAACTGAGTTCCAAATGAGTTTTTTGCTTCTGAA ATGGCGATGGCTTCACCTCTGGCCGTCAATGGAGTCAAGTTGGCTACGACTTCTCTAGCTTATGTGGACACCAAGGCTGCAAACAATACGAAGGCTCTGATGGCGGAGCTTTCCCGCCAATTCTACGGCCTCCGATTGGTTTCCAGCCCCGCCGGTAGCATTGCCATCAAGGTTCACGACCACTCCATTCCCAAGGGACAACACACAATCTCTTTGTCACATTCCGGTGTTAAGAAGGAGAGAATGCTCGCGGAGGACACCTGCATGTTATCTTATGGTGGGTCAATCTTATATTCACCACCTCCAAAGCCATTTTCTCACAAGCTCCCGAACTGTTTGGATGGTAGACCTCTTTTTATGAAGGATCCTTTCGGGAGCATCAAAGGAATTTCAAGCAAAATTTCTGTGAAGGCTGGGGCTCAAGGTTTAAATAATGAAAACAAACCATTGCCACGTTGCATAGTTCTTGATATCGAAGGGACTACTACTCCAATATCTTTTGTTACTGACATACTCTTTCCATATGCTCGTGATAACGTTGGAAAGCATTTGATTTTAACGTATGAAACTGCAGAAACCCAAGATGACATTATGTTATTGCGTTCACAAGTTGAAGAAGATTTGAAAAAAGGTGTCGCTGAAGCTGTGCCCGTCCCTCCTGATAATGCTGGGAAAGAGGAAGTCATTGCAGCATTGGTTGCTAATGTTGAAGCAATGATAAAAGCTGACCGCAAGATAGCTGCCTTGAAACAATTGCAAGGTCACATATGGAGAACAGGATTTTCAGGGAATGAATTGGAGGGAATAGTTTTTGATGATGTGCCAGAGGCTCTTGAGAGATGGCATGCTTTGGGCATTAAGGTCTACATATACTCGAGCGGAAGCAGGTTGGCACAAAGGCTTATATTCGGAAAGACTAATTATGGTGATCTAAGAAAATACTTATCAGGATTCTTTGACACTGCTGTGGGGAACAAAAGAGAAATAAGGAGTTATGTTGAGATTTCAGAGTCTCTTGGAGTTGATACACCATCAGAGATCCTGTTCATCACAGATGTCTATCAGGAAGCTGTAGCAGCAAAAGCAGCAGGGCTGCAGGTGGCCATCTCAATCCGACCAGGAAATGGTCCACTGCCTGATGATCATGGGTTCCAGACTGCCACTTCCTTCTCAGACATCACAGCTTGA MAMASPLAVNGVKLATTSLAYVDTKAANNTKALMAELSRQFYGLRLVSSPAGSIAIKVHDHSIPKGQHTISLSHSGVKKERMLAEDTCMLSYGGSILYSPPPKPFSHKLPNCLDGRPLFMKDPFGSIKGISSKISVKAGAQGLNNENKPLPRCIVLDIEGTTTPISFVTDILFPYARDNVGKHLILTYETAETQDDIMLLRSQVEEDLKKGVAEAVPVPPDNAGKEEVIAALVANVEAMIKADRKIAALKQLQGHIWRTGFSGNELEGIVFDDVPEALERWHALGIKVYIYSSGSRLAQRLIFGKTNYGDLRKYLSGFFDTAVGNKREIRSYVEISESLGVDTPSEILFITDVYQEAVAAKAAGLQVAISIRPGNGPLPDDHGFQTATSFSDITA
BLAST of CmaCh16G003990 vs. Swiss-Prot
Match: MTBC1_VITVI (Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 OS=Vitis vinifera GN=VIT_19s0014g02480 PE=3 SV=2) HSP 1 Score: 428.7 bits (1101), Expect = 6.9e-119 Identity = 212/271 (78.23%), Postives = 239/271 (88.19%), Query Frame = 1
BLAST of CmaCh16G003990 vs. Swiss-Prot
Match: MTBC_POPTR (Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Populus trichocarpa GN=POPTR_0001s40980g PE=3 SV=2) HSP 1 Score: 427.6 bits (1098), Expect = 1.5e-118 Identity = 207/265 (78.11%), Postives = 234/265 (88.30%), Query Frame = 1
BLAST of CmaCh16G003990 vs. Swiss-Prot
Match: MTBC_RICCO (Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Ricinus communis GN=RCOM_0591060 PE=3 SV=1) HSP 1 Score: 423.3 bits (1087), Expect = 2.9e-117 Identity = 212/274 (77.37%), Postives = 238/274 (86.86%), Query Frame = 1
BLAST of CmaCh16G003990 vs. Swiss-Prot
Match: MTBC_ORYSJ (Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Oryza sativa subsp. japonica GN=Os11g0484000 PE=2 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 1.1e-103 Identity = 182/248 (73.39%), Postives = 213/248 (85.89%), Query Frame = 1
BLAST of CmaCh16G003990 vs. Swiss-Prot
Match: MTBC_ORYSI (Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 OS=Oryza sativa subsp. indica GN=OsI_36120 PE=2 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 1.1e-103 Identity = 182/248 (73.39%), Postives = 213/248 (85.89%), Query Frame = 1
BLAST of CmaCh16G003990 vs. TrEMBL
Match: A0A0A0LAF4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G233480 PE=4 SV=1) HSP 1 Score: 627.1 bits (1616), Expect = 1.5e-176 Identity = 327/418 (78.23%), Postives = 352/418 (84.21%), Query Frame = 1
BLAST of CmaCh16G003990 vs. TrEMBL
Match: A0A059BMC0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01149 PE=4 SV=1) HSP 1 Score: 471.1 bits (1211), Expect = 1.3e-129 Identity = 245/395 (62.03%), Postives = 295/395 (74.68%), Query Frame = 1
BLAST of CmaCh16G003990 vs. TrEMBL
Match: A0A059BMP2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01149 PE=4 SV=1) HSP 1 Score: 462.2 bits (1188), Expect = 6.2e-127 Identity = 246/424 (58.02%), Postives = 297/424 (70.05%), Query Frame = 1
BLAST of CmaCh16G003990 vs. TrEMBL
Match: A0A059BNB1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01149 PE=4 SV=1) HSP 1 Score: 440.7 bits (1132), Expect = 1.9e-120 Identity = 233/393 (59.29%), Postives = 278/393 (70.74%), Query Frame = 1
BLAST of CmaCh16G003990 vs. TrEMBL
Match: A0A0D2SFC4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G170700 PE=4 SV=1) HSP 1 Score: 430.6 bits (1106), Expect = 2.0e-117 Identity = 212/280 (75.71%), Postives = 241/280 (86.07%), Query Frame = 1
BLAST of CmaCh16G003990 vs. TAIR10
Match: AT5G53850.2 (AT5G53850.2 haloacid dehalogenase-like hydrolase family protein) HSP 1 Score: 377.9 bits (969), Expect = 7.8e-105 Identity = 182/242 (75.21%), Postives = 216/242 (89.26%), Query Frame = 1
BLAST of CmaCh16G003990 vs. NCBI nr
Match: gi|659112020|ref|XP_008456026.1| (PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 isoform X2 [Cucumis melo]) HSP 1 Score: 647.5 bits (1669), Expect = 1.5e-182 Identity = 329/393 (83.72%), Postives = 355/393 (90.33%), Query Frame = 1
BLAST of CmaCh16G003990 vs. NCBI nr
Match: gi|659112018|ref|XP_008456025.1| (PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 isoform X1 [Cucumis melo]) HSP 1 Score: 633.6 bits (1633), Expect = 2.2e-178 Identity = 329/418 (78.71%), Postives = 355/418 (84.93%), Query Frame = 1
BLAST of CmaCh16G003990 vs. NCBI nr
Match: gi|778680342|ref|XP_011651293.1| (PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 [Cucumis sativus]) HSP 1 Score: 627.1 bits (1616), Expect = 2.1e-176 Identity = 327/418 (78.23%), Postives = 352/418 (84.21%), Query Frame = 1
BLAST of CmaCh16G003990 vs. NCBI nr
Match: gi|747100405|ref|XP_011098291.1| (PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 isoform X1 [Sesamum indicum]) HSP 1 Score: 496.9 bits (1278), Expect = 3.3e-137 Identity = 262/423 (61.94%), Postives = 307/423 (72.58%), Query Frame = 1
BLAST of CmaCh16G003990 vs. NCBI nr
Match: gi|720031130|ref|XP_010265717.1| (PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 [Nelumbo nucifera]) HSP 1 Score: 490.7 bits (1262), Expect = 2.3e-135 Identity = 259/406 (63.79%), Postives = 302/406 (74.38%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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