CsGy3G019130 (gene) Cucumber (Gy14) v2

NameCsGy3G019130
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr3 : 15322358 .. 15323507 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCTCCCTCAGTGTGAGGAAGAATGAGAATGGAGATAAGTTGATGGATGAAGACCTATTCAGAAATTTCATCCTCAAGCTTGCTTCTAAAATTCAGAACCCAAGACGTGTCAATCAAATATTTTTGGAATTTTAGATGCAAGTTATATGCTTGTTTTATCTCGACTTTATGACATTTTCATATCCTAATCATTGAAATATCTTGTTTCCCACGATAAATAGTTGTGATTTATATTATTTTGTTTTGTTTTCTTGCTAAACTAAATGATTCATACTCTTTATAATGAAGATCTCATTTGATGGCACCTTGTTCATTCTCTGTTTGCCTACTTTTGGCTCTTCTGTTTCTTTTTTCTTCTTTTACTGAACATTATACTCTAGACTTATCATTTTATGCATTGATAACACGCGTCCAGGATTCCTTTTCATAGGTGAAGTTCGAAATTGCTGCTTATGAGAAGTTAGTATTTGGAAAAATTAGAGGTTTGTTCCTCATTTATCATTGTGATGGAAAATTGATTTTACCTTCCTTCGTTTTTTTTTTCTTTTCTTTTTTTTAATTGAATATTTAAATAACTGAAAACTGTTTTGAATTTTTTTATGCAGATGGTATTCTTGTTGTTGCATCACATCTACTAATCAGTCCTATTCAGTTCAATCCAGTCGTGGCCGTAATCTCCAATCTGTCGCATTCTCTTGAATATTCAATCTGCATCTGTGACCTCCTCTATCGGTAAGTCGTCTCTTCCTTTTCTATTTCTCTATTTCTTTGTAATCTTTCCCTCAACTCCATGTCAAAATGTATGTAATGTGTGCAATTTTAAATTTTGGACAAACAATATATCAGACTTATAGCCGAAATAGATCACTATTTGAGAATGGGTGAATGAATTCTTAGTTTTTTCTTGTTTTGTTTAGGGTTTGGAATGATAAAGAGTGAAATGTACATCTAATTTCAATATATTTTGTAAATCATTTTAAATAGGAGAAAAAATATTTAGACGATTTTGCTTTCTTTTTAGTAATATTAAATTGCTAAAAATTATTTGCAACTATTTCTTTGTAGCTTAGCCACTCGAAATATGAGAAATTTTGTGAGCATATTCATGTCTGGAGTAAAGATGAATGCATGTGATTCTAGCTCATAG

mRNA sequence

ATGTCCTCCCTCAGTGTGAGGAAGAATGAGAATGGAGATAAGTTGATGGATGAAGACCTATTCAGAAATTTCATCCTCAAGCTTGCTTCTAAAATTCAGAACCCAAGACGTGTGAAGTTCGAAATTGCTGCTTATGAGAAGTTAGTATTTGGAAAAATTAGAGGGTTTGGAATGATAAAGAGTGAAATCTTAGCCACTCGAAATATGAGAAATTTTGTGAGCATATTCATGTCTGGAGTAAAGATGAATGCATGTGATTCTAGCTCATAG

Coding sequence (CDS)

ATGTCCTCCCTCAGTGTGAGGAAGAATGAGAATGGAGATAAGTTGATGGATGAAGACCTATTCAGAAATTTCATCCTCAAGCTTGCTTCTAAAATTCAGAACCCAAGACGTGTGAAGTTCGAAATTGCTGCTTATGAGAAGTTAGTATTTGGAAAAATTAGAGGGTTTGGAATGATAAAGAGTGAAATCTTAGCCACTCGAAATATGAGAAATTTTGTGAGCATATTCATGTCTGGAGTAAAGATGAATGCATGTGATTCTAGCTCATAG

Protein sequence

MSSLSVRKNENGDKLMDEDLFRNFILKLASKIQNPRRVKFEIAAYEKLVFGKIRGFGMIKSEILATRNMRNFVSIFMSGVKMNACDSSS
BLAST of CsGy3G019130 vs. NCBI nr
Match: KGN46560.1 (hypothetical protein Csa_6G108580 [Cucumis sativus])

HSP 1 Score: 65.9 bits (159), Expect = 8.2e-08
Identity = 37/54 (68.52%), Postives = 40/54 (74.07%), Query Frame = 0

Query: 1  MSSLSVRKNENGDKLMDEDLFRNFILKLASKIQNPRRVKFEIAAYEKLVFGKIR 55
          MSSLSVRKNENGD+LMD DLF NFILK      +    K E+AAYE LVFGKIR
Sbjct: 1  MSSLSVRKNENGDELMDGDLFGNFILK-----DSFWEAKSELAAYENLVFGKIR 49

BLAST of CsGy3G019130 vs. TrEMBL
Match: tr|A0A0A0KA31|A0A0A0KA31_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G108580 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.4e-08
Identity = 37/54 (68.52%), Postives = 40/54 (74.07%), Query Frame = 0

Query: 1  MSSLSVRKNENGDKLMDEDLFRNFILKLASKIQNPRRVKFEIAAYEKLVFGKIR 55
          MSSLSVRKNENGD+LMD DLF NFILK      +    K E+AAYE LVFGKIR
Sbjct: 1  MSSLSVRKNENGDELMDGDLFGNFILK-----DSFWEAKSELAAYENLVFGKIR 49

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN46560.18.2e-0868.52hypothetical protein Csa_6G108580 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KA31|A0A0A0KA31_CUCSA5.4e-0868.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G108580 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G019130.1CsGy3G019130.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None