CsGy3G018200 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G018200
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Uncharacterized protein
Location	Chr3 : 14362675 .. 14366540 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGAATCTCCATACCTGACCTCGTTTCATCCTACTCGGATTCCCTCTCTTTTGAGCTCTCTCGTTCCCTGTTTAAGCCGGAGCCGGAAGTCCTTTCTTTCACTGGAAGGTTACCCTGTAGTTATCGCCTCTCTTGATCGGAGGCCCATGATGTTTCCTGACTTCACATTAGCAGTGATGGCCATCTCTCTGTTTTTCATTCAGTCTTCACCTCTCTATGCTTGATCAAACTCTCCATTGAAGGTCTGTTTGCCGGTTGCTTCTGGTATCGTTGTGTTTGTTTATTGGAGAGATTTTTTGTAGTGTCTTATTTGAAATGAAACGAATCTGTCTTTAATTTCGTGCTTTTAAGTTTTTATTGGTGATTTGGATTTGGAGGTGTGCCCTAAAGAACTTCACGGGCTGCCTCATGAAGCAAGCGAAACAGTTCATCTTCTTCTCGTTTTTCCATTTATTTTTCGTAGTTGAAATTCCTACAACTCCACTTTCTTTGTAATTGACGGTATATAGGTCATTTTTTAAGGCCTCCTCATCTTAGGTGCTCAAGTGCTTAAGAGACTTTTTGTTAGTGATTCTTTTTGGAACGAGTATTGATTGAGTATCAATTCTTCACTCTCATTCTAGCATTTTTTGCTCAGCGAAACGAGGTTAATTTTTCCAAAGGATATAGATGATGTATTAAATATATACTTTATGCGTATGTTTTTGCAGAGTTGATCTTAATTATGGAGGTAAAGCCAAAAAGGAGAAATGCTGCAGAGAATGGGGAAACTACTGAAGATTTGGTGTTTGCAACATTCAGTGGGAATTGGGAGGATCTTGCTCCAATTGTGAGATATGCATTTCAAACGGGGCGGCCAGAAACTCTTCTTCATCAGTTGAAGAGCATTGTGAAGAAGAAAGAAGTTGAAATTGAGGAGTTGTGCAAGACTCACTATGAAGAATTTATTTGTGCTGTTGATGAACTTCGTGGTGTATTGATTGATGCTGAAGAATTGAAGGGCAAATTATCTACTGATAATTTTAAATTGCAAGAGGTAGGTAGTGCTCTCTTGGTCAGACTCGAAGAACTTCTTGGATCTTATTCTATTAAAAAAAATGTGACTGAAGCCATCAAAATGTCTGAGACTTGTGTTCAGATGTTGGAACTTTGTGCCAAATGCAATGATCATATCTCGGAAGGTCAGTTCTACCCTGCATTGAAAACTATAGATCTGATCGAGAAAAATTATTTGCAGAAAATTTCTGTTAAGGCACTAAGAATTGTCATTGAGACAAGAATTCCTATGATTAAATCTCACATTGAGAAAAAAGTTTCAAATGAATTTAATGAATGGCTTGTTCACATCAGAAGTTGTGCCAAGGTTATTGGGCAAACGGCTATCGGTCATGCAGCAACTGGTCGCCAAAGAGATGAGGAGATGTTAGAACGTCAGAGAAAAGCCGAGGAACAAAGCATTTCAGGTCTTGGAGATTTTGCATATACTTTAGATGTTGAAGATATTGATGAGGACTCTGTTCTAAAGTTTGACCTAGCACCTCTTTATCGTGCATTTCACATTCATACAAGCCTTGGAATCCAAGAGCAGTTTCGTGAGTATTACTATAGGAATCGAATGCTGCAGCTTAAGGCAGACTTGCAGATCTCCTCCACTCAGCCTTTTGTCGAATCATATCAGACACTTTTTTCTCAAATTGCAGGATATTTTATCGTGGAGGATCGTGTCATGAGAACTGCTAAAGGGTTATTATCAGCTGAACGTGTTGATGCAATGTTAGAAACTGCTGTTAGCAAGTTGACATCCTTGCTGGAAGAACAATTTTCCCTCATGGACTCTGCAACCCACCTTCTCCTGGTGAAGGATTATGTCACACTTTTGGCATCTGCTCTTAGACTGTATGGGTATGAAATTGCCCCGGTTCTTGAGGCTATAAGTAAAAACCAAAACAAATACCATGAACTTCTTTTGGAAGAGTGTCGGCAGCAGATTGTGGATGTTCTTGCTAATGACTTACATGAGCCGATGGTTGTAAAAAAAGATAGTGATTATGAAAACAACGTTATCTCCTTTAATCTCCAGCCATCGGATATAATGCCTGCATTTCCGTATATAGCAACATTTTCTTCTGCAGTTCCTGACGTCTGCCGCATTGTGAGGTCCTTCATTAAAGGGTCTGTTGATTATTTGTCTTACAGTGCACATTCTAATCCTTTTGATATTGTGAAGAAATATCTGGACAAGCTCCTAACTAATGTTTTAAATGAAGCAATACTCAATACTGTTCATAGCAGCTCCGTTGATGTTTCTCAAGCCATGCAAATTGCTGCAAATATAACTGTCCTGGAAAGAGCCTGCGACTTTTTGCTTGGCTATGCAGCTCAACTATCCGGGACGCCTGGTTTTTCAGTTGAAAGGCCACAAGCTAATCTTGCTTCTAGTATTGTTCTCAAAACTTCAAGAGATGCAGCTTATCTTGCATTGTTGAATTTGGTGAATACCAAAATAGATGAGTTTATGGCTCTTACAGAGAATATTGGTTGGACTTCTGAGGAGGTTTCTGCTAATGCAAATGACTACATAAATGAAGTGCTTATTTATCTTGACACTATAATGTCCACCGTACAACAGATTTTACCTATAGAAGCCTTGTATAAGGTTGGAAATGGAGTGTTTGAACACATATCAGACTCTATTTTTGCAGCTTTTCTTAGTGATAGCGTCAAAAGGTTCAATGCTAACGCAGTCATGGCTATTGACAATGATCTAAAGGTGCTGGAAACATTTGCAGATGAGAGGTTCCACAGCATTGGATTGAGTGAAGTGTATGAAGGGGGTAGTTTTCGGAACTCTCTAGTCGAAGCCAGACAACTTATTAACCTTTTGCTGAGCAATCAACCTGAAAACTTCACGAATCCTGAGATAAGAGAGAAGAACTATAACATGTTGGATTACAAGAAGGTGGCTAGTATATGTGAGAAATTCAAAGATACTCCTGATGGGATCTTCGGGAGCCTTTCAAGCAGAAATGCGAAACAAAGCAGTCGAAAGAAGTCAATGGACATGCTGAAGAAAAGACTGAAAGATTTCACCTAACAAGGCTTGAAGAGTGGGTGCAATAGCAGTAAGAACTCAACTCTCCTCGCCCTATTTGATTCAATGCCTGTACAATTTTTCTCCTCTGCTGCATTTTATTTGGATGTTTTGTGTTATATTATTTCTTGGTCATTGCAACATTTTATTTTTGCTCGTCTTTTCTTTTGCCACTTTTGGTATTAGGGGTGAGCATGATGGACCGAAAAATTGAATCAACCGAACAAACCGAAGACTCTCATTGGAAAATGAGAGGGGGGTCGGTTTCAGAAAGTTTCAGATCAAGAATCTTCAAAAAGTATTTAAGTGTTAAACCAACCGACCCGACAAAAAATCGACTGACCCTTACTCATCAATGTCAAAATCGATTTAAACATTTATTAAATTGAATATGATCGGTTTGTGATCGATTTTGTAAAATAAAAAAGAACTCTTATCAACCGATGATTACCCCTACCTAGTATTATAAGAACAGATAAAAGGTAGTACACAAGTCTGATATATCTTAACCTTAAGGGGAACCTTTCTTTATTGGACAAAGGTGCACATTACACTTGAGGGTTAGGGTTTCGTTTAACACGGGAATGGTTGAGTACAAATTAGATCAACTTACCATTACTTTCACTTTGCATAAATCCTTGAAATCCAAACTCACCCTAAGATCATGGGAGCCAGAATATTCTTCCTAACCCAATATTTAATATCCTTAAGATGAGGAAAAGTTCAAAGAGTGGTGTCACGAATTAATGGAATGAAGTTTATTTTAAAGTATTT

mRNA sequence

GTTGAATCTCCATACCTGACCTCGTTTCATCCTACTCGGATTCCCTCTCTTTTGAGCTCTCTCGTTCCCTGTTTAAGCCGGAGCCGGAAGTCCTTTCTTTCACTGGAAGGTTACCCTGTAGTTATCGCCTCTCTTGATCGGAGGCCCATGATGTTTCCTGACTTCACATTAGCAAGTTGATCTTAATTATGGAGGTAAAGCCAAAAAGGAGAAATGCTGCAGAGAATGGGGAAACTACTGAAGATTTGGTGTTTGCAACATTCAGTGGGAATTGGGAGGATCTTGCTCCAATTGTGAGATATGCATTTCAAACGGGGCGGCCAGAAACTCTTCTTCATCAGTTGAAGAGCATTGTGAAGAAGAAAGAAGTTGAAATTGAGGAGTTGTGCAAGACTCACTATGAAGAATTTATTTGTGCTGTTGATGAACTTCGTGGTGTATTGATTGATGCTGAAGAATTGAAGGGCAAATTATCTACTGATAATTTTAAATTGCAAGAGGTAGGTAGTGCTCTCTTGGTCAGACTCGAAGAACTTCTTGGATCTTATTCTATTAAAAAAAATGTGACTGAAGCCATCAAAATGTCTGAGACTTGTGTTCAGATGTTGGAACTTTGTGCCAAATGCAATGATCATATCTCGGAAGGTCAGTTCTACCCTGCATTGAAAACTATAGATCTGATCGAGAAAAATTATTTGCAGAAAATTTCTGTTAAGGCACTAAGAATTGTCATTGAGACAAGAATTCCTATGATTAAATCTCACATTGAGAAAAAAGTTTCAAATGAATTTAATGAATGGCTTGTTCACATCAGAAGTTGTGCCAAGGTTATTGGGCAAACGGCTATCGGTCATGCAGCAACTGGTCGCCAAAGAGATGAGGAGATGTTAGAACGTCAGAGAAAAGCCGAGGAACAAAGCATTTCAGGTCTTGGAGATTTTGCATATACTTTAGATGTTGAAGATATTGATGAGGACTCTGTTCTAAAGTTTGACCTAGCACCTCTTTATCGTGCATTTCACATTCATACAAGCCTTGGAATCCAAGAGCAGTTTCGTGAGTATTACTATAGGAATCGAATGCTGCAGCTTAAGGCAGACTTGCAGATCTCCTCCACTCAGCCTTTTGTCGAATCATATCAGACACTTTTTTCTCAAATTGCAGGATATTTTATCGTGGAGGATCGTGTCATGAGAACTGCTAAAGGGTTATTATCAGCTGAACGTGTTGATGCAATGTTAGAAACTGCTGTTAGCAAGTTGACATCCTTGCTGGAAGAACAATTTTCCCTCATGGACTCTGCAACCCACCTTCTCCTGGTGAAGGATTATGTCACACTTTTGGCATCTGCTCTTAGACTGTATGGGTATGAAATTGCCCCGGTTCTTGAGGCTATAAGTAAAAACCAAAACAAATACCATGAACTTCTTTTGGAAGAGTGTCGGCAGCAGATTGTGGATGTTCTTGCTAATGACTTACATGAGCCGATGGTTGTAAAAAAAGATAGTGATTATGAAAACAACGTTATCTCCTTTAATCTCCAGCCATCGGATATAATGCCTGCATTTCCGTATATAGCAACATTTTCTTCTGCAGTTCCTGACGTCTGCCGCATTGTGAGGTCCTTCATTAAAGGGTCTGTTGATTATTTGTCTTACAGTGCACATTCTAATCCTTTTGATATTGTGAAGAAATATCTGGACAAGCTCCTAACTAATGTTTTAAATGAAGCAATACTCAATACTGTTCATAGCAGCTCCGTTGATGTTTCTCAAGCCATGCAAATTGCTGCAAATATAACTGTCCTGGAAAGAGCCTGCGACTTTTTGCTTGGCTATGCAGCTCAACTATCCGGGACGCCTGGTTTTTCAGTTGAAAGGCCACAAGCTAATCTTGCTTCTAGTATTGTTCTCAAAACTTCAAGAGATGCAGCTTATCTTGCATTGTTGAATTTGGTGAATACCAAAATAGATGAGTTTATGGCTCTTACAGAGAATATTGGTTGGACTTCTGAGGAGGTTTCTGCTAATGCAAATGACTACATAAATGAAGTGCTTATTTATCTTGACACTATAATGTCCACCGTACAACAGATTTTACCTATAGAAGCCTTGTATAAGGTTGGAAATGGAGTGTTTGAACACATATCAGACTCTATTTTTGCAGCTTTTCTTAGTGATAGCGTCAAAAGGTTCAATGCTAACGCAGTCATGGCTATTGACAATGATCTAAAGGTGCTGGAAACATTTGCAGATGAGAGGTTCCACAGCATTGGATTGAGTGAAGTGTATGAAGGGGGTAGTTTTCGGAACTCTCTAGTCGAAGCCAGACAACTTATTAACCTTTTGCTGAGCAATCAACCTGAAAACTTCACGAATCCTGAGATAAGAGAGAAGAACTATAACATGTTGGATTACAAGAAGGTGGCTAGTATATGTGAGAAATTCAAAGATACTCCTGATGGGATCTTCGGGAGCCTTTCAAGCAGAAATGCGAAACAAAGCAGTCGAAAGAAGTCAATGGACATGCTGAAGAAAAGACTGAAAGATTTCACCTAACAAGGCTTGAAGAGTGGGTGCAATAGCAGTAAGAACTCAACTCTCCTCGCCCTATTTGATTCAATGCCTGTACAATTTTTCTCCTCTGCTGCATTTTATTTGGATGTTTTGTGTTATATTATTTCTTGGTCATTGCAACATTTTATTTTTGCTCGTCTTTTCTTTTGCCACTTTTGGTATTAGGGGTGAGCATGATGGACCGAAAAATTGAATCAACCGAACAAACCGAAGACTCTCATTGGAAAATGAGAGGGGGGTCGGTTTCAGAAAGTTTCAGATCAAGAATCTTCAAAAAGTATTTAAGTGTTAAACCAACCGACCCGACAAAAAATCGACTGACCCTTACTCATCAATGTCAAAATCGATTTAAACATTTATTAAATTGAATATGATCGGTTTGTGATCGATTTTGTAAAATAAAAAAGAACTCTTATCAACCGATGATTACCCCTACCTAGTATTATAAGAACAGATAAAAGGTAGTACACAAGTCTGATATATCTTAACCTTAAGGGGAACCTTTCTTTATTGGACAAAGGTGCACATTACACTTGAGGGTTAGGGTTTCGTTTAACACGGGAATGGTTGAGTACAAATTAGATCAACTTACCATTACTTTCACTTTGCATAAATCCTTGAAATCCAAACTCACCCTAAGATCATGGGAGCCAGAATATTCTTCCTAACCCAATATTTAATATCCTTAAGATGAGGAAAAGTTCAAAGAGTGGTGTCACGAATTAATGGAATGAAGTTTATTTTAAAGTATTT

Coding sequence (CDS)

GTTGAATCTCCATACCTGACCTCGTTTCATCCTACTCGGATTCCCTCTCTTTTGAGCTCTCTCGTTCCCTGTTTAAGCCGGAGCCGGAAGTCCTTTCTTTCACTGGAAGGTTACCCTGTAGTTATCGCCTCTCTTGATCGGAGGCCCATGATGTTTCCTGACTTCACATTAGCAAGTTGA

Protein sequence

VESPYLTSFHPTRIPSLLSSLVPCLSRSRKSFLSLEGYPVVIASLDRRPMMFPDFTLAS

Homology

[Close]

BLAST of CsGy3G018200 vs. NCBI nr
Match: KGN57518.1 (hypothetical protein Csa_3G203250 [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 1.6e-23
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 1  VESPYLTSFHPTRIPSLLSSLVPCLSRSRKSFLSLEGYPVVIASLDRRPMMFPDFTLA 59
          VESPYLTSFHPTRIPSLLSSLVPCLSRSRKSFLSLEGYPVVIASLDRRPMMFPDFTLA
Sbjct: 5  VESPYLTSFHPTRIPSLLSSLVPCLSRSRKSFLSLEGYPVVIASLDRRPMMFPDFTLA 62

[Close]

BLAST of CsGy3G018200 vs. TrEMBL
Match: tr|A0A0A0L719|A0A0A0L719_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G203250 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.0e-23
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 1  VESPYLTSFHPTRIPSLLSSLVPCLSRSRKSFLSLEGYPVVIASLDRRPMMFPDFTLA 59
          VESPYLTSFHPTRIPSLLSSLVPCLSRSRKSFLSLEGYPVVIASLDRRPMMFPDFTLA
Sbjct: 5  VESPYLTSFHPTRIPSLLSSLVPCLSRSRKSFLSLEGYPVVIASLDRRPMMFPDFTLA 62

The following BLAST results are available for this feature:

BLAST of CsGy3G018200 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN57518.1	1.6e-23	100.00	hypothetical protein Csa_3G203250 [Cucumis sativus]	[more]

BLAST of CsGy3G018200 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsGy3G018200 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy3G018200 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L719\|A0A0A0L719_CUCSA	1.0e-23	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G203250 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G018200.1	CsGy3G018200.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G018200	Csa3G203250	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G018200	CsaV3_3G018410	Cucumber (Chinese Long) v3	cgybcucB117

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G018200	Cucumber (Gy14) v2	cgybcgybB115
CsGy3G018200	Cucurbita maxima (Rimu)	cgybcmaB295
CsGy3G018200	Cucurbita maxima (Rimu)	cgybcmaB332
CsGy3G018200	Cucurbita maxima (Rimu)	cgybcmaB379
CsGy3G018200	Cucurbita maxima (Rimu)	cgybcmaB410
CsGy3G018200	Cucurbita moschata (Rifu)	cgybcmoB270
CsGy3G018200	Cucurbita moschata (Rifu)	cgybcmoB301
CsGy3G018200	Cucurbita moschata (Rifu)	cgybcmoB352
CsGy3G018200	Cucurbita moschata (Rifu)	cgybcmoB386
CsGy3G018200	Cucurbita pepo (Zucchini)	cgybcpeB317
CsGy3G018200	Cucurbita pepo (Zucchini)	cgybcpeB336
CsGy3G018200	Cucurbita pepo (Zucchini)	cgybcpeB362
CsGy3G018200	Cucumber (Chinese Long) v2	cgybcuB151
CsGy3G018200	Bottle gourd (USVL1VR-Ls)	cgyblsiB173
CsGy3G018200	Bottle gourd (USVL1VR-Ls)	cgyblsiB198
CsGy3G018200	Melon (DHL92) v3.5.1	cgybmeB160
CsGy3G018200	Melon (DHL92) v3.5.1	cgybmeB210
CsGy3G018200	Melon (DHL92) v3.6.1	cgybmedB160
CsGy3G018200	Melon (DHL92) v3.6.1	cgybmedB215
CsGy3G018200	Watermelon (Charleston Gray)	cgybwcgB197
CsGy3G018200	Watermelon (Charleston Gray)	cgybwcgB214
CsGy3G018200	Watermelon (97103) v1	cgybwmB229
CsGy3G018200	Watermelon (97103) v1	cgybwmB253
CsGy3G018200	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G018200	Wild cucumber (PI 183967)	cgybcpiB153
CsGy3G018200	Silver-seed gourd	carcgybB0221
CsGy3G018200	Silver-seed gourd	carcgybB0380
CsGy3G018200	Cucumber (Chinese Long) v3	cgybcucB156
CsGy3G018200	Watermelon (97103) v2	cgybwmbB190
CsGy3G018200	Watermelon (97103) v2	cgybwmbB206
CsGy3G018200	Wax gourd	cgybwgoB271
CsGy3G018200	Wax gourd	cgybwgoB298