CsGy3G018090 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G018090
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr3 : 14232061 .. 14232437 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGAAATTTCGATCAAATCGCCGACAAATTTCAGTAGAGCTGATGTGGGAAATGGGATTGCAAAAAATGGCTTAATCTCGAATTTCACAGTAAGATTGGGGTGTGAAATCAGCTTGAATCTATGTCGCTTCGCCAGCTTCTATCAGGCTATGGACCAAGTATTATCTCCTGAAACAAAAAGGATTTATTGGGTTTGTTTCTCGAAATTTTCTATGCACATAAAAGGGATTTTTCCAATGGTGGTTCACAATTTCAGGACAGTGAGAAGAGAACCGGCAAAAACACGAACCCTTCAATCAGAAAGAGGTTGGGAACTGGGAATTTTTTGAGGAAGCGGCCATTTGCAGCAGAAGGTGAAGCTTTCAGGTTTTGA

mRNA sequence

ATGAAAGAAATTTCGATCAAATCGCCGACAAATTTCAGTAGAGCTGATGTGGGAAATGGGATTGCAAAAAATGGCTTAATCTCGAATTTCACAGTAAGATTGGGGTGTGAAATCAGCTTGAATCTATGTCGCTTCGCCAGCTTCTATCAGGCTATGGACCAAGACAGTGAGAAGAGAACCGGCAAAAACACGAACCCTTCAATCAGAAAGAGGTTGGGAACTGGGAATTTTTTGAGGAAGCGGCCATTTGCAGCAGAAGGTGAAGCTTTCAGGTTTTGA

Coding sequence (CDS)

ATGAAAGAAATTTCGATCAAATCGCCGACAAATTTCAGTAGAGCTGATGTGGGAAATGGGATTGCAAAAAATGGCTTAATCTCGAATTTCACAGTAAGATTGGGGTGTGAAATCAGCTTGAATCTATGTCGCTTCGCCAGCTTCTATCAGGCTATGGACCAAGACAGTGAGAAGAGAACCGGCAAAAACACGAACCCTTCAATCAGAAAGAGGTTGGGAACTGGGAATTTTTTGAGGAAGCGGCCATTTGCAGCAGAAGGTGAAGCTTTCAGGTTTTGA

Protein sequence

MKEISIKSPTNFSRADVGNGIAKNGLISNFTVRLGCEISLNLCRFASFYQAMDQDSEKRTGKNTNPSIRKRLGTGNFLRKRPFAAEGEAFRF
Homology
[Close]
BLAST of CsGy3G018090 vs. NCBI nr
Match: KGN57503.1 (hypothetical protein Csa_3G199650 [Cucumis sativus])

HSP 1 Score: 187.2 bits (474), Expect = 2.5e-44
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MKEISIKSPTNFSRADVGNGIAKNGLISNFTVRLGCEISLNLCRFASFYQAMDQDSEKRT 60
          MKEISIKSPTNFSRADVGNGIAKNGLISNFTVRLGCEISLNLCRFASFYQAMDQDSEKRT
Sbjct: 1  MKEISIKSPTNFSRADVGNGIAKNGLISNFTVRLGCEISLNLCRFASFYQAMDQDSEKRT 60

Query: 61 GKNTNPSIRKRLGTGNFLRKRPFAAEGEAFRF 93
          GKNTNPSIRKRLGTGNFLRKRPFAAEGEAFRF
Sbjct: 61 GKNTNPSIRKRLGTGNFLRKRPFAAEGEAFRF 92

[Close]
BLAST of CsGy3G018090 vs. TrEMBL
Match: tr|A0A0A0L710|A0A0A0L710_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G199650 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.7e-44
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MKEISIKSPTNFSRADVGNGIAKNGLISNFTVRLGCEISLNLCRFASFYQAMDQDSEKRT 60
          MKEISIKSPTNFSRADVGNGIAKNGLISNFTVRLGCEISLNLCRFASFYQAMDQDSEKRT
Sbjct: 1  MKEISIKSPTNFSRADVGNGIAKNGLISNFTVRLGCEISLNLCRFASFYQAMDQDSEKRT 60

Query: 61 GKNTNPSIRKRLGTGNFLRKRPFAAEGEAFRF 93
          GKNTNPSIRKRLGTGNFLRKRPFAAEGEAFRF
Sbjct: 61 GKNTNPSIRKRLGTGNFLRKRPFAAEGEAFRF 92

The following BLAST results are available for this feature:
BLAST of CsGy3G018090 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57503.12.5e-44100.00hypothetical protein Csa_3G199650 [Cucumis sativus][more]
BLAST of CsGy3G018090 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy3G018090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy3G018090 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L710|A0A0A0L710_CUCSA1.7e-44100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G199650 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G018090.1CsGy3G018090.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy3G018090Csa3G199650Cucumber (Chinese Long) v2cgybcuB109
CsGy3G018090CSPI03G18200Wild cucumber (PI 183967)cgybcpiB110
CsGy3G018090CsaV3_3G018260Cucumber (Chinese Long) v3cgybcucB117
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G018090Cucumber (Gy14) v2cgybcgybB115
CsGy3G018090Cucurbita maxima (Rimu)cgybcmaB295
CsGy3G018090Cucurbita maxima (Rimu)cgybcmaB332
CsGy3G018090Cucurbita maxima (Rimu)cgybcmaB379
CsGy3G018090Cucurbita maxima (Rimu)cgybcmaB410
CsGy3G018090Cucurbita moschata (Rifu)cgybcmoB270
CsGy3G018090Cucurbita moschata (Rifu)cgybcmoB301
CsGy3G018090Cucurbita moschata (Rifu)cgybcmoB352
CsGy3G018090Cucurbita moschata (Rifu)cgybcmoB386
CsGy3G018090Cucurbita pepo (Zucchini)cgybcpeB317
CsGy3G018090Cucurbita pepo (Zucchini)cgybcpeB362
CsGy3G018090Cucurbita pepo (Zucchini)cgybcpeB423
CsGy3G018090Cucumber (Chinese Long) v2cgybcuB151
CsGy3G018090Bottle gourd (USVL1VR-Ls)cgyblsiB173
CsGy3G018090Bottle gourd (USVL1VR-Ls)cgyblsiB198
CsGy3G018090Melon (DHL92) v3.5.1cgybmeB160
CsGy3G018090Melon (DHL92) v3.5.1cgybmeB210
CsGy3G018090Melon (DHL92) v3.6.1cgybmedB160
CsGy3G018090Melon (DHL92) v3.6.1cgybmedB215
CsGy3G018090Watermelon (Charleston Gray)cgybwcgB197
CsGy3G018090Watermelon (Charleston Gray)cgybwcgB214
CsGy3G018090Watermelon (97103) v1cgybwmB229
CsGy3G018090Watermelon (97103) v1cgybwmB253
CsGy3G018090Wild cucumber (PI 183967)cgybcpiB153
CsGy3G018090Silver-seed gourdcarcgybB0307
CsGy3G018090Silver-seed gourdcarcgybB0380
CsGy3G018090Cucumber (Chinese Long) v3cgybcucB156
CsGy3G018090Watermelon (97103) v2cgybwmbB190
CsGy3G018090Watermelon (97103) v2cgybwmbB206
CsGy3G018090Wax gourdcgybwgoB271
CsGy3G018090Wax gourdcgybwgoB298