CsGy3G017550 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G017550
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionMethionyl-tRNA formyltransferase, putative
LocationChr3 : 13503682 .. 13510121 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTCCTTCTCGTTTACTAGTTCAGCAATGGATAAAAACGAGGCGGAAGGAGCCCGAATCCACCACTGAAGAACACTAAACAATATCAATGACTTCCTCGCTCATGTTTCGTCGCTTTTCCTGTTTTCACTCTCCATCTTCTCCTTCTTCAGTTTTCTCCAAGAAGAAGCCCCTCGTTTTCCTGGGTTCTCCTCAGGTTCTCCATTTTTCTTTACACTTTTTGGTAGTTGGTTTTCTCATTCCATTGCTTAATAGAAGAAATGCCTTTTTCTTAGGTCTCAACCGTAGTTCTTGATGCTCTTCTTAATGCATCTTCTCCCGCAGATGCAGCTTTTGAGGTATCTATTAAGCTCTTACCTCTTCACTTCACTCTTGTGTATGATTGATGTGAGTTTGGTTTTGCCCGATTGCCGCTCCCCAGTTTCTTACTATGTTCGTGTTTAGTATAATTGTTAATATGAATTTAGAGAAGAAGAATGGGGGCTGGAGGAAGTTGTATAGGAAATGATTGTAACTTGTTTCATTTAGAACTATGTCAAAAATCACAACAACCTATTTCATGTTTTGAACTATTTCTAACTATAAAATCTCCGATCAGTATTTGAACACGGGACAAAGCCAATTAAGAACTATAACTCAATACCTGGATTGGTGGGTGCTCTTTTCAGTCTTCTTTTAGAATCAATGCCGAGGGATTTCCATTAAGCTCCCATAGGCTATACGTGAATCTATTACATTGGTTATGTGAAGGTTATCTGCGGTGATAATCGACATCAGTCAAATTGCCGTTCTGTTTTGACATTAATCACTGTTCTTATTAACTGTTGAAAGCTTATCATTGAACTTGAAGGTATGGATTCGGTAGAATTTATGAGTATTACTGTCCTTTGAGCGAAAATTTTAGAATTTCTAGCGTAAGCCACTTATAGGAAGAATAGCCTTCCACTGTGTTTCTAATTTCTATATAAAGACCCTATCCTCTTCTACTCACCTAGAAGGGGAATTTTGTGATCTAATACCAAATTTTCAATCTTATCATTACCTTATTAACATTTCTAAGAAAACAACCATACCTTATTAACAATGGTTTCTTGTGACATGGAATAAGTTGTGATACGATGTTAGATTGCAGAAATGTGTTTATACGATGACTAATGTTAAATTGTTTAGGTTGCAGCTATTGTTACTCAACCACCTTCTAGAAGGGATAGGGGGAGAAAGCTGATGCCTTCTCCAGTTGCGCAATATGCCCTTGATAAAGGCTTCTCTTCTGACCTTATTCTTACGCCTGAAAAAGCTGGAGAGGTAGTGTTACCTTTTTTTTTGAGATGAGGGCTTAAGGATTTGATTCTGCTTGCTATGGTGATAGAAACAACTGAATTTTAAGAATGTGGAAATTTCTAAATTATAAGCATGCTGTGAGAGTGTATGAGGCGTACTTCTACAACATTGGGCATCAAGTTTATTTCTTCCAATGAAGAACCTTCTATGTTTATTTTGTAAGTGCATGATAAATCTGTGGTATTTGTGGAGTCTAAAAGTTGTGATGGATGGTAATTAATTTTGCACTGGTTATTGCTTGTTTCTATTCTTTCTATTTGTGGTAGAGAGATTTACTTTCTACTTTTTTATTGAACTTGTCTTAGTGATCACTTTGTGCAAACCGTAATACTCACAAATGAGCCTAATTCTTATTCACAAGACATTTTTGAGATATTCTTACTTTTTTTTTAATGATCATTGGTGTTAAGTTCTTAAACTTAGTTACAATAATATTGATGTGGGACTTTTCAAACTTCTGTAATACTCTCTTTGATGGAAAATTCTTTATGTTACAGTAGAAATTATATCTTTTTAACTGGAGACAACTTTTATTGATTAAATGAAAAGAGAGACTAATGCTCAAAAGATACAAAGCTCCACAAAGGAGAAAAAGTAAATGCAATACAATTTCAATAATTGAAGCATAATCATAAAAGATAATAAGTCTTGTAGAAATTATAATGCTTGTTTCTTCTTATTTTCCTTCAGGACATGTTCTTGAGCACCTTGAAGGCTTTGGAACCTGAACTATGTATTACAGCAGCATATGGAAATATCTTACCGACCAAATTTCTGAACATTCCAGCATTGGGTAAGCCATTTATTTTTGTTGATATTCAAAGTAAAAAACAATTGTTGGAAACATAGCCAGAACTAGAAGGAAGCAGAAAAATCTTTCATGAGGTGGACAGAAAACCTGGTCAAATTTGGGAGGGTTTCGTTTTCCCTCTTGGAGTTATTCAATTAATTTCTCTTGTAATTATGATCCCTCAGGGACGGTCAATATTCACCCAAGTCTATTGCCATTATATCGCGGTGCTGCCCCTGTTCAGAGGGCATTGCAGGTTGCTTATGCTTATAAGCTATTGATATCAACTGTTCAATTTTTTCCATACCTTCAAATAGTAATATGATTTTTTCCCCTGCCTTTAGGACGGTGTTAAGGAGACTGGCGTATCACTAGCATTCACAGTTCGTGCATTGGATGCTGGACCCATCATTGCTTCTGAAAAATTGGAAGTCGATGAGCATATCAAGGTGCGCCTGTAACTATTAGTTTACAGTTTATGCAACATGACATGCATTTCTTGATTATTGATTCCTGTAAAGCACTAGTGGTTGGTATCTGAAAAATCCATCACACGGTTCACTAGTAAATTATAATCAGAATACAATTGAGATGGAGTCAACTATTAGAAGTGCATTTTTTTTTCCACTTTATTCCCAATACAGAGGTTTTTATGAATTCAACTACTTGTTTCATGTCTTATTCTGCTCAGTTAGACATCATCTGAAAACTTGCATTTTGTTCATTTTACCTTTGAACTCTTGAAGGTGGAGGGTTCATTCGTCCTTTCTTCACTAACCTCCTATTCAATTTGCTAGCAGGCACCCGATTTACTTGCATTGCTATTTTTAGAAGGTGGGGCATTCTGTGTCTGTCGAACTTCCCTTGACCTTGATGCTTTCTTTAATTCTGTCTTTTCTCGTTATTTTTTTAGCGTATCGGAACTTCTTAGTTTCATCTGTCTTGTGAAGAGTGGCACTGATTTCTAATTCTTCATTTTATTAGATAACTTAAATCACAATACCATAAATTTGTAGCTTTTGAAGTCGTCAACTTAAATATATATGTGCGCTTCTGTTACAATCTAAAATGACCTAGTTTTTTTTCTCTTTTTAACAAATAAAAGGTACAAGAGAAGGACCACGGATAAGGGGAATAAAGAGCACTGAAAATTTACTAAAAGGAGCTCGAAGTGATGGTAATTAAAAAACGGGTAAAAGGAAGCATTAAAACATCAGACCCCACTAACCAAACCTATCATTTTTTTAATTATTTTTTAAAAGCAACAAAGATTTTCATTGATAAAATAAATAGTCTAATGCTAAACATACAAGATACTGTAACAGAGAAGATACCAAAAAATGAAAAAAAATTACAATAACTAAACTGCGTAGATAATTAACAAAAGCTTCGGAAAGAGAACACCATAATGGGGTGACAAGTCAAGCTGAACCCAACCGATCTAACTGAACTAATGATTTGTCATGGAATACCCTTTGATTACGTCAAACCATAACTCTGATAGAAGAGTTTTAAATGCGTTGGTCCATAAAATTTGAGATTTGGATGATAATGAAGGACCGGCCAGTACTTGAAGAATGTTCTCATAAAGGAGCTTCAAAGACCCATTGTAATGTAATAGGATTTGTGTAATTTAGTAAATTCAAAATTAGTTAACCTATCCCCATTTAATTATCTATAAATAGAGAGCCCCTCCCTTGTATTCACTAGATTTGATCATTTGAATAAAAGTCTATCGCTTGGTTCTACATTACATTGCAAACCAAAATATGAAAGTAAACTCCACCAACAGGAATGAGCGAATGAGCACTCGGAAAATAAATGCTGCAAGTGGGCAAATAGAACAAGGGGGTTAGTGTGTGGAAGTTGGGGTGGCAAAGCAACCTCCTTTTCCAAGAGGCCAGGAGGCAATCAAGTATTTTGATAGAGCTATAGCTAACTGAAAACATACCAAGAAGGTCTGTTTGGATTGATAAAATTTAGTTAAAATACACTTCAAATCTATTTTACGTGGTTTCCGAACACTTCAATTTTTCATAAAATGACTTATTTTCAAAATTGTACAGTTGAAAAGTTAATCTAAACATATCTAATGATCATCTCCTATAAGAAGAATGGGATAGTGCTTGTCTGCCAATAAATTAGAGTTGAGAAATAATTATCAAAAGAAAGTTATACTTTTAGACCTTTAATATTACATGGATGGTTTTAGTTGTAGTATCTTGACACGGCTTAAGTAGCACTCTAGAGGACCAAAGTGTAAAACTGGAAACTGTGAGACAAATGAAGCTTCTAATCTGCTTACTGTCCACTCTCTTCCAGGCTCTAAACTCTTGATTCGGGAACTTCCTTCTATACTTGATGGATCTGCCGAAAAGAAGGCGCAGCCTCAAGATGAATCTAAAGCTACCAAAGCTCCAAAGGTACCCTTGGTTGAGGTCTTCTATGATAAATGTACATTCAAATAAAGGGAAAGTAATTTTGGTTGGTATGCTTTAGACTGGAAGAACAACAAAATAATTAGTCATCTAATCATTCATATTGACGTAAATAAAATTTCTAACTCATTCTCTTATAATTAGTTAACATTATTTCGTTGTACAATAAAGTGAAGCAAGAAGTAGACATCCATGAACTGTGAGTATTGACTTCTGCAGATTGCTCCCGATGAGGCATGGCTATCATTTGATCAAGAGGCATGTGTCCTACACAACAAGGTAATTTTACTCTTCTTTTTGTTCAATTTTGCAGTTAAAACATGCATCCCTTCTAGGTTCGTGCATTTGCAGGATGGCCTGGAACACGAGCTAAGATTGTTGTTGTTGATGAGAAAAGTGGTCATGACGATATCCTAGAATTTAAAATCATTACTACAAGGCTAAACGTCAATTGTAGTAGTCAGGAGACTCAAGCAGACGAGATCCGCTTTGTCAAGGACGCTTTGGTGTTCCCATGTGGAGGGCACACGTCACTTGAGGTTGGTTCCATATTGTTGCCTATTTATATTATGCTGAAGTTGGTGTTGCATACAATAGAAGTATAGCATTATCCATATTGATTAACCTAACCGTCTTTAAGAGTCAAGAGTCATGTAAATAATAAAGGGTTTAGAGAGATTGGGTTCAAGGCTTCAAGCCAAGATATCCATTTTACTTAAAAATTTAATACCATAGTAGTTTCTTTATGAGTATAGTCGAGGTTGGAAACGTGTCCGACATTCTTAGATGTGTTTGAAAAAAATATTTTTTTTCCCTTAATTTTGGACACGGTTGGATACAATTTGGACATATCTTTGGAAAGTTTTTAACCAATTTGGGTTTCTCTTATGGTTTGTACCTTATATATATTGTTCGTGTTTGTGCTTCAAATCTTATTTAGATTTTGTTTTAGATCAGTTGCATTTTCTTATGTCAACTAGATAGAACTTTCAAAATGTTAGGAAGTTGCTAGAAATTCACAAAAATTCACATCAAGCCCTTACAAACCGCCTAAGATACAAGTTTCACAACCTACCCACAGTTCCTTAATTACAAAAGAGCTTCTCAATTTGAAGAAATCATTGAAAATGAATAAAGTATAAATTTTTTATCTAAAGACATCCACCCAAGACTAATCAAAATTTAAACACATTACCAAGAAGACATACTTTAGCAGCATCCTCAAAATCTTATTATTTGTTTAATTTCCAACCATTAATTGCATAAGGTTGCCTTTATGGCATAAATCTTCACAATTTCTTTGCTTTTTCTTGAAAGTTCCACCAAATGTTGTACATTTTCTTGCACCCGAAGATCACCTCCATTTGTCACTTTGTTAACAATATTACATCTTTTCACTTGTTCTTTAAAACATATACCATCACATATTTTTGACCTAGCATAAAGTTGAATTACTACCACTGTGCACAAACATGGTTAGGCTGCATTTTCATTATGGTTCTTTGGTAATTTGACCAGGTATTGGAAGTTCAATTACCTGGAAAGAAGGTCATTAGCGCAAGCGCCTTTTGGAATGGCATGCAAGGTAAAAAGTTGAAGAAATTTGATGCAAGCAAACATTTCTTGCGCGTGTTGTCATGATATTTAGATGTTGAGTCTAGGTGAAGGGATTTGTTCATCCATTGCACATGTTGTGGTATTTAGATGTAATCCGATGCAATTTTCTGCATCATACATAGAATTATTTTGTTTTCTCATTTGTTAACATTTTCAGAATGTTGATTGATCTAAAAGTGATCTCTTTTGAGTTATTTCTCTCTTTTAAAATAGAATACGAAAATATCAAACTTTCCGTATTCTAATGACTACTA

mRNA sequence

ATTTCCTTCTCGTTTACTAGTTCAGCAATGGATAAAAACGAGGCGGAAGGAGCCCGAATCCACCACTGAAGAACACTAAACAATATCAATGACTTCCTCGCTCATGTTTCGTCGCTTTTCCTGTTTTCACTCTCCATCTTCTCCTTCTTCAGTTTTCTCCAAGAAGAAGCCCCTCGTTTTCCTGGGTTCTCCTCAGGTCTCAACCGTAGTTCTTGATGCTCTTCTTAATGCATCTTCTCCCGCAGATGCAGCTTTTGAGGTTGCAGCTATTGTTACTCAACCACCTTCTAGAAGGGATAGGGGGAGAAAGCTGATGCCTTCTCCAGTTGCGCAATATGCCCTTGATAAAGGCTTCTCTTCTGACCTTATTCTTACGCCTGAAAAAGCTGGAGAGGTAGTGTTACCTTTTTTTTTGAGATGAGGGCTTAAGGATTTGATTCTGCTTGCTATGGTGATAGAAACAACTGAATTTTAAGAATGTGGAAATTTCTAAATTATAAGCATGCTGTGAGAGTGTATGAGGCGTACTTCTACAACATTGGGCATCAAGTTTATTTCTTCCAATGAAGAACCTTCTATGTTTATTTTGACATGTTCTTGAGCACCTTGAAGGCTTTGGAACCTGAACTATGTATTACAGCAGCATATGGAAATATCTTACCGACCAAATTTCTGAACATTCCAGCATTGGGGACGGTCAATATTCACCCAAGTCTATTGCCATTATATCGCGGTGCTGCCCCTGTTCAGAGGGCATTGCAGGACGGTGTTAAGGAGACTGGCGTATCACTAGCATTCACAGTTCGTGCATTGGATGCTGGACCCATCATTGCTTCTGAAAAATTGGAAGTCGATGAGCATATCAAGGCACCCGATTTACTTGCATTGCTATTTTTAGAAGGCTCTAAACTCTTGATTCGGGAACTTCCTTCTATACTTGATGGATCTGCCGAAAAGAAGGCGCAGCCTCAAGATGAATCTAAAGCTACCAAAGCTCCAAAGATTGCTCCCGATGAGGCATGGCTATCATTTGATCAAGAGGCATGTGTCCTACACAACAAGGTAATTTTACTCTTCTTTTTGTTCAATTTTGCAGTTAAAACATGCATCCCTTCTAGGTTCGTGCATTTGCAGGATGGCCTGGAACACGAGCTAAGATTGTTGTTGTTGATGAGAAAAGTGGTCATGACGATATCCTAGAATTTAAAATCATTACTACAAGGCTAAACGTCAATTGTAGTAGTCAGGAGACTCAAGCAGACGAGATCCGCTTTGTCAAGGACGCTTTGGTGTTCCCATGTGGAGGGCACACGTCACTTGAGGTATTGGAAGTTCAATTACCTGGAAAGAAGGTCATTAGCGCAAGCGCCTTTTGGAATGGCATGCAAGGTAAAAAGTTGAAGAAATTTGATGCAAGCAAACATTTCTTGCGCGTGTTGTCATGATATTTAGATGTTGAGTCTAGGTGAAGGGATTTGTTCATCCATTGCACATGTTGTGGTATTTAGATGTAATCCGATGCAATTTTCTGCATCATACATAGAATTATTTTGTTTTCTCATTTGTTAACATTTTCAGAATGTTGATTGATCTAAAAGTGATCTCTTTTGAGTTATTTCTCTCTTTTAAAATAGAATACGAAAATATCAAACTTTCCGTATTCTAATGACTACTA

Coding sequence (CDS)

ATGACTTCCTCGCTCATGTTTCGTCGCTTTTCCTGTTTTCACTCTCCATCTTCTCCTTCTTCAGTTTTCTCCAAGAAGAAGCCCCTCGTTTTCCTGGGTTCTCCTCAGGTCTCAACCGTAGTTCTTGATGCTCTTCTTAATGCATCTTCTCCCGCAGATGCAGCTTTTGAGGTTGCAGCTATTGTTACTCAACCACCTTCTAGAAGGGATAGGGGGAGAAAGCTGATGCCTTCTCCAGTTGCGCAATATGCCCTTGATAAAGGCTTCTCTTCTGACCTTATTCTTACGCCTGAAAAAGCTGGAGAGGTAGTGTTACCTTTTTTTTTGAGATGA

Protein sequence

MTSSLMFRRFSCFHSPSSPSSVFSKKKPLVFLGSPQVSTVVLDALLNASSPADAAFEVAAIVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPEKAGEVVLPFFLR
Homology
[Close]
BLAST of CsGy3G017550 vs. NCBI nr
Match: XP_004140739.1 (PREDICTED: mitochondrial 10-formyltetrahydrofolate dehydrogenase isoform X1 [Cucumis sativus])

HSP 1 Score: 192.6 bits (488), Expect = 7.1e-46
Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MTSSLMFRRFSCFHSPSSPSSVFSKKKPLVFLGSPQVSTVVLDALLNASSPADAAFEVAA 60
           MTSSLMFRRFSCFHSPSSPSSVFSKKKPLVFLGSPQVSTVVLDALLNASS ADAAFE+AA
Sbjct: 1   MTSSLMFRRFSCFHSPSSPSSVFSKKKPLVFLGSPQVSTVVLDALLNASSLADAAFEIAA 60

Query: 61  IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPEKAGE 103
           IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPEKAGE
Sbjct: 61  IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPEKAGE 102

[Close]
BLAST of CsGy3G017550 vs. NCBI nr
Match: KGN57436.1 (hypothetical protein Csa_3G185160 [Cucumis sativus])

HSP 1 Score: 192.6 bits (488), Expect = 7.1e-46
Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MTSSLMFRRFSCFHSPSSPSSVFSKKKPLVFLGSPQVSTVVLDALLNASSPADAAFEVAA 60
           MTSSLMFRRFSCFHSPSSPSSVFSKKKPLVFLGSPQVSTVVLDALLNASS ADAAFE+AA
Sbjct: 1   MTSSLMFRRFSCFHSPSSPSSVFSKKKPLVFLGSPQVSTVVLDALLNASSLADAAFEIAA 60

Query: 61  IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPEKAGE 103
           IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPEKAGE
Sbjct: 61  IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPEKAGE 102

[Close]
BLAST of CsGy3G017550 vs. NCBI nr
Match: XP_008457091.1 (PREDICTED: methionyl-tRNA formyltransferase isoform X1 [Cucumis melo])

HSP 1 Score: 189.9 bits (481), Expect = 4.6e-45
Identity = 98/102 (96.08%), Postives = 100/102 (98.04%), Query Frame = 0 

Query: 1   MTSSLMFRRFSCFHSPSSPSSVFSKKKPLVFLGSPQVSTVVLDALLNASSPADAAFEVAA 60
           MTSSLMFRRFSCFHSPSSPSS+FSKKKPLVFLGSPQVST VLDALLNASS ADAAFEVAA
Sbjct: 1   MTSSLMFRRFSCFHSPSSPSSLFSKKKPLVFLGSPQVSTAVLDALLNASSSADAAFEVAA 60

Query: 61  IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPEKAGE 103
           IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPE+AGE
Sbjct: 61  IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPERAGE 102

[Close]
BLAST of CsGy3G017550 vs. NCBI nr
Match: XP_008457092.1 (PREDICTED: methionyl-tRNA formyltransferase isoform X2 [Cucumis melo])

HSP 1 Score: 189.9 bits (481), Expect = 4.6e-45
Identity = 98/102 (96.08%), Postives = 100/102 (98.04%), Query Frame = 0 

Query: 1   MTSSLMFRRFSCFHSPSSPSSVFSKKKPLVFLGSPQVSTVVLDALLNASSPADAAFEVAA 60
           MTSSLMFRRFSCFHSPSSPSS+FSKKKPLVFLGSPQVST VLDALLNASS ADAAFEVAA
Sbjct: 1   MTSSLMFRRFSCFHSPSSPSSLFSKKKPLVFLGSPQVSTAVLDALLNASSSADAAFEVAA 60

Query: 61  IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPEKAGE 103
           IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPE+AGE
Sbjct: 61  IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPERAGE 102

[Close]
BLAST of CsGy3G017550 vs. NCBI nr
Match: XP_008457094.1 (PREDICTED: methionyl-tRNA formyltransferase isoform X4 [Cucumis melo])

HSP 1 Score: 189.9 bits (481), Expect = 4.6e-45
Identity = 98/102 (96.08%), Postives = 100/102 (98.04%), Query Frame = 0 

Query: 1   MTSSLMFRRFSCFHSPSSPSSVFSKKKPLVFLGSPQVSTVVLDALLNASSPADAAFEVAA 60
           MTSSLMFRRFSCFHSPSSPSS+FSKKKPLVFLGSPQVST VLDALLNASS ADAAFEVAA
Sbjct: 1   MTSSLMFRRFSCFHSPSSPSSLFSKKKPLVFLGSPQVSTAVLDALLNASSSADAAFEVAA 60

Query: 61  IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPEKAGE 103
           IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPE+AGE
Sbjct: 61  IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPERAGE 102

[Close]
BLAST of CsGy3G017550 vs. TAIR10
Match: AT1G66520.1 (formyltransferase, putative)

HSP 1 Score: 129.0 bits (323), Expect = 1.8e-30
Identity = 65/100 (65.00%), Postives = 83/100 (83.00%), Query Frame = 0 

Query: 5   LMFRRFSCFHSPSSPSSV--FSKKKPLVFLGSPQVSTVVLDALLNASSPADAAFEVAAIV 64
           ++ RRF C+++ S+ SS+    KKKPL+FLGSPQVS  VL+AL NAS+  +++FEVA IV
Sbjct: 1   MILRRFICYNASSTVSSIAPSPKKKPLIFLGSPQVSVSVLEALFNASNAPNSSFEVAGIV 60

Query: 65  TQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPEKAGE 103
           TQPPSRRDRG+K++PSPVAQYALDKG  SDLI +PEKAG+
Sbjct: 61  TQPPSRRDRGKKVLPSPVAQYALDKGLPSDLIFSPEKAGD 100

[Close]
BLAST of CsGy3G017550 vs. Swiss-Prot
Match: sp|A1TWN0|FMT_MARHV (Methionyl-tRNA formyltransferase OS=Marinobacter hydrocarbonoclasticus (strain ATCC 700491 / DSM 11845 / VT8) OX=351348 GN=fmt PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.9e-06
Identity = 31/74 (41.89%), Postives = 40/74 (54.05%), Query Frame = 0 

Query: 29  LVFLGSPQVSTVVLDALLNASSPADAAFEVAAIVTQPPSRRDRGRKLMPSPVAQYALDKG 88
           +VF G+P  +   L  LLN      A +++  + TQP     RGRKLMPSPV Q ALD G
Sbjct: 3   IVFAGTPDFAATALKTLLN------AGYDIVGVYTQPDRPAGRGRKLMPSPVKQVALDTG 62

Query: 89  FS--SDLILTPEKA 101
                 + L PE+A
Sbjct: 63  IPVYQPVSLKPEEA 70

[Close]
BLAST of CsGy3G017550 vs. Swiss-Prot
Match: sp|Q827P7|FMT_STRAW (Methionyl-tRNA formyltransferase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=fmt PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.1e-05
Identity = 32/71 (45.07%), Postives = 43/71 (60.56%), Query Frame = 0 

Query: 29  LVFLGSPQVSTVVLDALLNASSPADAAFEVAAIVTQPPSRRDRGRKLMPSPVAQYALDKG 88
           LVF G+P+V+   LDAL+     A    EVAA+VT+P +   RGR+L+ SPVAQ A + G
Sbjct: 3   LVFAGTPEVAVPALDALI-----ASGRHEVAAVVTRPDAPAGRGRRLVASPVAQRAEEAG 62

Query: 89  FSSDLILTPEK 100
                +L P K
Sbjct: 63  IE---VLKPVK 65

[Close]
BLAST of CsGy3G017550 vs. Swiss-Prot
Match: sp|Q9L0Y6|FMT_STRCO (Methionyl-tRNA formyltransferase OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) OX=100226 GN=fmt PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.9e-05
Identity = 31/71 (43.66%), Postives = 43/71 (60.56%), Query Frame = 0 

Query: 29  LVFLGSPQVSTVVLDALLNASSPADAAFEVAAIVTQPPSRRDRGRKLMPSPVAQYALDKG 88
           LVF G+P+V+   LDAL+     A    EVAA+VT+P +   RGR+L+ SPVA+ A + G
Sbjct: 3   LVFAGTPEVAVPALDALI-----ASGRHEVAAVVTRPDAPAGRGRRLVASPVAERAEEAG 62

Query: 89  FSSDLILTPEK 100
                +L P K
Sbjct: 63  IE---VLKPAK 65

[Close]
BLAST of CsGy3G017550 vs. Swiss-Prot
Match: sp|Q6NH23|FMT_CORDI (Methionyl-tRNA formyltransferase OS=Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis) OX=257309 GN=fmt PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.4e-05
Identity = 29/69 (42.03%), Postives = 42/69 (60.87%), Query Frame = 0 

Query: 29 LVFLGSPQVSTVVLDALLNASSPADAAFEVAAIVTQPPSRRDRGRKLMPSPVAQYALDKG 88
          L+F G+P+ + VVL  LL      ++  EV A++T+P +RR RGR L PSPV++ A   G
Sbjct: 3  LIFAGTPEPAVVVLSRLL------ESEHEVVAVLTRPDARRGRGRTLHPSPVSELAQQHG 62

Query: 89 FSSDLILTP 98
               +LTP
Sbjct: 63 IE---VLTP 62

[Close]
BLAST of CsGy3G017550 vs. Swiss-Prot
Match: sp|A9BAJ3|FMT_PROM4 (Methionyl-tRNA formyltransferase OS=Prochlorococcus marinus (strain MIT 9211) OX=93059 GN=fmt PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.4e-05
Identity = 28/70 (40.00%), Postives = 41/70 (58.57%), Query Frame = 0 

Query: 29 LVFLGSPQVSTVVLDALLNASSPADAAFEVAAIVTQPPSRRDRGRKLMPSPVAQYALDKG 88
          +VF G+P+ S  +L+AL+N+        +V  +VTQP  RR RG KL+ SPV   AL+  
Sbjct: 3  IVFWGTPEFSVPILEALINSD------HDVVGVVTQPDRRRSRGNKLIHSPVKTVALENN 62

Query: 89 FSSDLILTPE 99
               +LTP+
Sbjct: 63 IP---VLTPQ 63

[Close]
BLAST of CsGy3G017550 vs. TrEMBL
Match: tr|A0A0A0LBL3|A0A0A0LBL3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G185160 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 4.7e-46
Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 0 

Query: 1   MTSSLMFRRFSCFHSPSSPSSVFSKKKPLVFLGSPQVSTVVLDALLNASSPADAAFEVAA 60
           MTSSLMFRRFSCFHSPSSPSSVFSKKKPLVFLGSPQVSTVVLDALLNASS ADAAFE+AA
Sbjct: 1   MTSSLMFRRFSCFHSPSSPSSVFSKKKPLVFLGSPQVSTVVLDALLNASSLADAAFEIAA 60

Query: 61  IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPEKAGE 103
           IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPEKAGE
Sbjct: 61  IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPEKAGE 102

[Close]
BLAST of CsGy3G017550 vs. TrEMBL
Match: tr|A0A1S3C4Q1|A0A1S3C4Q1_CUCME (methionyl-tRNA formyltransferase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496854 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 3.1e-45
Identity = 98/102 (96.08%), Postives = 100/102 (98.04%), Query Frame = 0 

Query: 1   MTSSLMFRRFSCFHSPSSPSSVFSKKKPLVFLGSPQVSTVVLDALLNASSPADAAFEVAA 60
           MTSSLMFRRFSCFHSPSSPSS+FSKKKPLVFLGSPQVST VLDALLNASS ADAAFEVAA
Sbjct: 1   MTSSLMFRRFSCFHSPSSPSSLFSKKKPLVFLGSPQVSTAVLDALLNASSSADAAFEVAA 60

Query: 61  IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPEKAGE 103
           IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPE+AGE
Sbjct: 61  IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPERAGE 102

[Close]
BLAST of CsGy3G017550 vs. TrEMBL
Match: tr|A0A1S3C4B3|A0A1S3C4B3_CUCME (methionyl-tRNA formyltransferase isoform X4 OS=Cucumis melo OX=3656 GN=LOC103496854 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 3.1e-45
Identity = 98/102 (96.08%), Postives = 100/102 (98.04%), Query Frame = 0 

Query: 1   MTSSLMFRRFSCFHSPSSPSSVFSKKKPLVFLGSPQVSTVVLDALLNASSPADAAFEVAA 60
           MTSSLMFRRFSCFHSPSSPSS+FSKKKPLVFLGSPQVST VLDALLNASS ADAAFEVAA
Sbjct: 1   MTSSLMFRRFSCFHSPSSPSSLFSKKKPLVFLGSPQVSTAVLDALLNASSSADAAFEVAA 60

Query: 61  IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPEKAGE 103
           IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPE+AGE
Sbjct: 61  IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPERAGE 102

[Close]
BLAST of CsGy3G017550 vs. TrEMBL
Match: tr|A0A1S3C5E7|A0A1S3C5E7_CUCME (methionyl-tRNA formyltransferase isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496854 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 3.1e-45
Identity = 98/102 (96.08%), Postives = 100/102 (98.04%), Query Frame = 0 

Query: 1   MTSSLMFRRFSCFHSPSSPSSVFSKKKPLVFLGSPQVSTVVLDALLNASSPADAAFEVAA 60
           MTSSLMFRRFSCFHSPSSPSS+FSKKKPLVFLGSPQVST VLDALLNASS ADAAFEVAA
Sbjct: 1   MTSSLMFRRFSCFHSPSSPSSLFSKKKPLVFLGSPQVSTAVLDALLNASSSADAAFEVAA 60

Query: 61  IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPEKAGE 103
           IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPE+AGE
Sbjct: 61  IVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPERAGE 102

[Close]
BLAST of CsGy3G017550 vs. TrEMBL
Match: tr|A0A2N9IEX8|A0A2N9IEX8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52259 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.7e-32
Identity = 79/103 (76.70%), Postives = 88/103 (85.44%), Query Frame = 0 

Query: 1   MTSSLMFRRFSCFHSPSSPS-SVFSKKKPLVFLGSPQVSTVVLDALLNASSPADAAFEVA 60
           M SSLM RRF CF++ +S S S  SKKK LVFLGSPQVST VLDAL NAS+  D+ FEVA
Sbjct: 1   MNSSLMLRRFCCFNTATSSSLSSCSKKKSLVFLGSPQVSTTVLDALFNASTVPDSLFEVA 60

Query: 61  AIVTQPPSRRDRGRKLMPSPVAQYALDKGFSSDLILTPEKAGE 103
           AIVTQPPSRRDRG+K+MPSPVAQYALD+GFSSDLI TP+KAGE
Sbjct: 61  AIVTQPPSRRDRGKKVMPSPVAQYALDRGFSSDLIFTPQKAGE 103

The following BLAST results are available for this feature:
BLAST of CsGy3G017550 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004140739.17.1e-4698.04PREDICTED: mitochondrial 10-formyltetrahydrofolate dehydrogenase isoform X1 [Cuc... [more]
KGN57436.17.1e-4698.04hypothetical protein Csa_3G185160 [Cucumis sativus][more]
XP_008457091.14.6e-4596.08PREDICTED: methionyl-tRNA formyltransferase isoform X1 [Cucumis melo][more]
XP_008457092.14.6e-4596.08PREDICTED: methionyl-tRNA formyltransferase isoform X2 [Cucumis melo][more]
XP_008457094.14.6e-4596.08PREDICTED: methionyl-tRNA formyltransferase isoform X4 [Cucumis melo][more]
BLAST of CsGy3G017550 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G66520.11.8e-3065.00formyltransferase, putative[more]
BLAST of CsGy3G017550 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|A1TWN0|FMT_MARHV2.9e-0641.89Methionyl-tRNA formyltransferase OS=Marinobacter hydrocarbonoclasticus (strain A... [more]
sp|Q827P7|FMT_STRAW1.1e-0545.07Methionyl-tRNA formyltransferase OS=Streptomyces avermitilis (strain ATCC 31267 ... [more]
sp|Q9L0Y6|FMT_STRCO1.9e-0543.66Methionyl-tRNA formyltransferase OS=Streptomyces coelicolor (strain ATCC BAA-471... [more]
sp|Q6NH23|FMT_CORDI2.4e-0542.03Methionyl-tRNA formyltransferase OS=Corynebacterium diphtheriae (strain ATCC 700... [more]
sp|A9BAJ3|FMT_PROM42.4e-0540.00Methionyl-tRNA formyltransferase OS=Prochlorococcus marinus (strain MIT 9211) OX... [more]
BLAST of CsGy3G017550 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LBL3|A0A0A0LBL3_CUCSA4.7e-4698.04Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G185160 PE=4 SV=1[more]
tr|A0A1S3C4Q1|A0A1S3C4Q1_CUCME3.1e-4596.08methionyl-tRNA formyltransferase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496... [more]
tr|A0A1S3C4B3|A0A1S3C4B3_CUCME3.1e-4596.08methionyl-tRNA formyltransferase isoform X4 OS=Cucumis melo OX=3656 GN=LOC103496... [more]
tr|A0A1S3C5E7|A0A1S3C5E7_CUCME3.1e-4596.08methionyl-tRNA formyltransferase isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496... [more]
tr|A0A2N9IEX8|A0A2N9IEX8_FAGSY1.7e-3276.70Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52259 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016742hydroxymethyl-, formyl- and related transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR036477Formyl_transf_N_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071951 conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
biological_process GO:0006413 translational initiation
biological_process GO:0009058 biosynthetic process
biological_process GO:0006555 methionine metabolic process
biological_process GO:0046653 tetrahydrofolate metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004479 methionyl-tRNA formyltransferase activity
molecular_function GO:0016742 hydroxymethyl-, formyl- and related transferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G017550.1CsGy3G017550.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.40.50.170coord: 21..104
e-value: 8.1E-11
score: 43.8
NoneNo IPR availablePANTHERPTHR11138:SF4TRANSFERASE, PUTATIVE-RELATEDcoord: 28..101
NoneNo IPR availablePANTHERPTHR11138METHIONYL-TRNA FORMYLTRANSFERASEcoord: 28..101
IPR036477Formyl transferase, N-terminal domain superfamilySUPERFAMILYSSF53328Formyltransferasecoord: 28..89