CsGy3G015960 (gene) Cucumber (Gy14) v2

NameCsGy3G015960
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr3 : 11846550 .. 11846929 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTACAGCAACAATAGCTTCGGTTGCTTGGAAGAAAGTTATTATCTTCTTTACTTTGCTTCTTCTTGCTTACAACATTTCGGCGAGAGAACTTGTTGCTCGCACCACCTGTAAGTCTTTTTCTCTTTCCATAATACCCTTATGATAATATTAGTATCTCAGCTTAAACTTTTGAGTTTGATTGGTGATTTAACTGATTCCGCCAGAAACTCTTTTACGTCTCTTGTTTTTGGTTAATAGGTGAGCCATCGTTGACGACAGAGATGAATGATGTAATAGACCGGAGATTATTTGTTCGGCAATTGGATACCTCTTGGAGAGGAAATTATTTTCCTCCTCCTAAACCGCCAAGGTCTTGATTTGAACATGAGATGTTAA

mRNA sequence

ATGGCTACAGCAACAATAGCTTCGGTTGCTTGGAAGAAAGTTATTATCTTCTTTACTTTGCTTCTTCTTGCTTACAACATTTCGGCGAGAGAACTTACCGGAGATTATTTGTTCGGCAATTGGATACCTCTTGGAGAGGAAATTATTTTCCTCCTCCTAAACCGCCAAGGTCTTGATTTGAACATGAGATGTTAA

Coding sequence (CDS)

ATGGCTACAGCAACAATAGCTTCGGTTGCTTGGAAGAAAGTTATTATCTTCTTTACTTTGCTTCTTCTTGCTTACAACATTTCGGCGAGAGAACTTACCGGAGATTATTTGTTCGGCAATTGGATACCTCTTGGAGAGGAAATTATTTTCCTCCTCCTAAACCGCCAAGGTCTTGATTTGAACATGAGATGTTAA

Protein sequence

MATATIASVAWKKVIIFFTLLLLAYNISARELTGDYLFGNWIPLGEEIIFLLLNRQGLDLNMRC
BLAST of CsGy3G015960 vs. NCBI nr
Match: KGN57260.1 (hypothetical protein Csa_3G175610 [Cucumis sativus])

HSP 1 Score: 60.1 bits (144), Expect = 3.2e-06
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0

Query: 1  MATATIASVAWKKVIIFFTLLLLAYNISAREL 33
          MATATIASVAWKKVIIFFTLLLLAYNISAREL
Sbjct: 1  MATATIASVAWKKVIIFFTLLLLAYNISAREL 32

BLAST of CsGy3G015960 vs. TrEMBL
Match: tr|A0A0A0L5K7|A0A0A0L5K7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175610 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.1e-06
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0

Query: 1  MATATIASVAWKKVIIFFTLLLLAYNISAREL 33
          MATATIASVAWKKVIIFFTLLLLAYNISAREL
Sbjct: 1  MATATIASVAWKKVIIFFTLLLLAYNISAREL 32

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN57260.13.2e-06100.00hypothetical protein Csa_3G175610 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0L5K7|A0A0A0L5K7_CUCSA2.1e-06100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175610 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G015960.1CsGy3G015960.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy3G015960Csa3G175610Cucumber (Chinese Long) v2cgybcuB109
CsGy3G015960CSPI03G15870Wild cucumber (PI 183967)cgybcpiB110
CsGy3G015960CsaV3_3G016080Cucumber (Chinese Long) v3cgybcucB117
The following gene(s) are paralogous to this gene:

None