CsGy2G009710 (gene) Cucumber (Gy14) v2

Overview
NameCsGy2G009710
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr2 : 9226838 .. 9227362 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACATGATTGTTTTGTTTGACGATCTATGGTTGTCAGATGGACGGATTTGCACTCGCTTTGGTGATAGGATAGTGTGGAAAGCTGCGAGTGGGGGATTCTCGCTTGTTGAATTTTTTGGAGGTTGCGTCTTGGTGTTGGCCTCGTGGTTCTTCACCGTTGATGGACTGGGAGTCCCTGTGTGTGGTAGGTGGATAGGTGGATTTGAGTGTCGTCGTGTCGATAGGTGTTGTCTGTGAGAGAGCAAAATTTCAAATTTAAAAATGATAAAATATAAAATTCTACTATATCTTGTAAATAATTTCTAACAGTTTTACTATTTATAGTCAATCTTTCCTCTAACGTCAAAACCTAAATTAAACAATGGTTACTATTCAAATGATTACAAACGTAAACAAAATAATTATTAATGAAGTCCTCAATCAATTTATTGAAGTCATAAATGTAGGAAAAAAGTGGGTATTGATGCAGTGAAGAGAATTTTTTTTCAAATTCATGGTTTTAAAAGAGAAGCTATTTCGTAA

mRNA sequence

ATGGACATGATTGTTTTGTTTGACGATCTATGGTTGTCAGATGGACGGATTTGCACTCGCTTTGGTGATAGGATAGTGTGGAAAGCTGCGAGTGGGGGATTCTCGCTTGTTGAATTTTTTGGAGGTTGCGTCTTGGTGTTGGCCTCGTGGTTCTTCACCGTTGATGGACTGGGAGTCCCTGTGTGTGGTAGAGAAGCTATTTCGTAA

Coding sequence (CDS)

ATGGACATGATTGTTTTGTTTGACGATCTATGGTTGTCAGATGGACGGATTTGCACTCGCTTTGGTGATAGGATAGTGTGGAAAGCTGCGAGTGGGGGATTCTCGCTTGTTGAATTTTTTGGAGGTTGCGTCTTGGTGTTGGCCTCGTGGTTCTTCACCGTTGATGGACTGGGAGTCCCTGTGTGTGGTAGAGAAGCTATTTCGTAA

Protein sequence

MDMIVLFDDLWLSDGRICTRFGDRIVWKAASGGFSLVEFFGGCVLVLASWFFTVDGLGVPVCGREAIS
Homology
[Close]
BLAST of CsGy2G009710 vs. NCBI nr
Match: KGN61519.1 (hypothetical protein Csa_2G153080 [Cucumis sativus])

HSP 1 Score: 139.0 bits (349), Expect = 5.8e-30
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MDMIVLFDDLWLSDGRICTRFGDRIVWKAASGGFSLVEFFGGCVLVLASWFFTVDGLGVP 60
          MDMIVLFDDLWLSDGRICTRFGDRIVWKAASGGFSLVEFFGGCVLVLASWFFTVDGLGVP
Sbjct: 1  MDMIVLFDDLWLSDGRICTRFGDRIVWKAASGGFSLVEFFGGCVLVLASWFFTVDGLGVP 60

Query: 61 VCGR 65
          VCGR
Sbjct: 61 VCGR 64

[Close]
BLAST of CsGy2G009710 vs. TrEMBL
Match: tr|A0A0A0LKH2|A0A0A0LKH2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G153080 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.8e-30
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MDMIVLFDDLWLSDGRICTRFGDRIVWKAASGGFSLVEFFGGCVLVLASWFFTVDGLGVP 60
          MDMIVLFDDLWLSDGRICTRFGDRIVWKAASGGFSLVEFFGGCVLVLASWFFTVDGLGVP
Sbjct: 1  MDMIVLFDDLWLSDGRICTRFGDRIVWKAASGGFSLVEFFGGCVLVLASWFFTVDGLGVP 60

Query: 61 VCGR 65
          VCGR
Sbjct: 61 VCGR 64

The following BLAST results are available for this feature:
BLAST of CsGy2G009710 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61519.15.8e-30100.00hypothetical protein Csa_2G153080 [Cucumis sativus][more]
BLAST of CsGy2G009710 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy2G009710 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy2G009710 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LKH2|A0A0A0LKH2_CUCSA3.8e-30100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G153080 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G009710.1CsGy2G009710.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy2G009710Csa2G153080Cucumber (Chinese Long) v2cgybcuB056
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy2G009710Cucurbita moschata (Rifu)cgybcmoB186
CsGy2G009710Cucurbita pepo (Zucchini)cgybcpeB175
CsGy2G009710Melon (DHL92) v3.5.1cgybmeB115
CsGy2G009710Melon (DHL92) v3.6.1cgybmedB114
CsGy2G009710Wild cucumber (PI 183967)cgybcpiB056
CsGy2G009710Cucumber (Chinese Long) v3cgybcucB064