CsGy2G007860 (gene) Cucumber (Gy14) v2

Overview
NameCsGy2G007860
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr2 : 6526818 .. 6534330 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAGGTCAGGTGCCTCCTGAGATGAGCCAAGAGAAGGCCAAGTAAAGTTAGTTAGGTGACAAGCGAGTCAAGGACATGCGACAAGGCATTGTTGGGAGGTTTTGTGATGTGATTAAGGAGACCTAGGTGACCATCATGGAAGACACTAAGGGGTGCTTGGCATGTAGGTCCAGGATCAAATTCCTAAAAGTTAAATGCTTGTAGGCTTTGATAACTCGTAGAAATACAAGTTATTATGGCCTTCTAGGTAGAACAATGGAACCAAAACACATAATAATGTGTAAAAACGCGTAACTTCTATCACAAATTTGTAAATATTAGAGAATACAACTTACATAAGTCTCCACGTCTGTTTTATCTTGTTTTTGAATGTTTTATTACAGGATTTTAGAGAAAAGAAGAGACAATAAATTGCAGAGGAGCACATACAAAAGCTACGCAAAAGGAACCCTGTCTGGCGAATAAAACCCCTAGGCGAGAAGTTACTTCGTAACGTGAGGAAGATTCACTAGCAGATAAGAATGGTAGATAGAGTTGATGTGACATGACAAAACTGCAAACTGTGATGACATGATCAGAATAATAATAATTTCTCGTTGAAAGTATTCTATGTAAAGTCTCCTTCTACACCAATTAGCTTTGCTTGGCTTGAATGGACAAAAACTATAGAGCTTTATTAGAGTCCAAAAGGCCGCAAAAAAGACTAGCCTTTCCACCCTCTTCAAAAGTTCATCTTCTTATCTGGTCAATCTTGTAAGTTAGCTTAGAGAGAAAACTAAAGAAAGATCCACCATCTTCTTACCCCTAACTTGTAACATCTTTCATCTCTTTACTTTATATTTTTATATTTCATTGTAATGTATGATGTTCATATTGTACAGTGGTATAAGGTCTACATTCTTTAATACATTGCATATTTATTCCCTTTCAATCTTTCATTCCTTTATTGTTTATTTATCAAAGTGTTATTAATAGTTTAGGCTTGCGATAAATTCTTGATAAGGAGTCTAGCTTATAAGGTTTATTGCGTTAGTTGAGCTACTTTACTCCATCGCTTGGCTAGCGTATATCGCCAACTACTCGAAAGAGCAAGTAGTAAGGATATTGCTAGCGCGCACAAGGAGAAGTTTGGAGACAAACTCTAACTTGGTGATTAAACCTCCATCACTTGTATCCCGAAAGGAGAATAATTGTGGTGACTTGGCGCCGAGAGGTTGTCACCCTTAAAAGAGGGGTAATATAAGTCTTATAAGTAATGACCTCTAGATAGATATTGCTTAGCTAAACTTTATTATTTGCATCTTGAGAGGCGAGCAAGTGTGGCGTTTAAGGCACTGAGAGGTGCTCGCCTTATTTAAAAGCTAGTTACTTGATCTTTATCGCATGGCTTAATCGCCTAACAATGCAAAGACGTTTCTTTACTTTTCCTTAATACAAGTTAGTTCATTTTCCATTGTCTCACCATTCTTACCATCTTTTATATATAGAATCTCTAGCGTAGATATTAGGATTAACACTTAGCCACACATTTACTTTATACTGTATAGATATTGTATACAACCTAGATGAAGAAGTAAGCTCTATAACTAAGATTTGATATAAATTTCCTGTGTTCGATCTAGGCTTGCCTAGAAAACCTATTGTTTCGCTATCCTTGGACAAGTGATAGGAAAACTAATTATACGCAACGAGGATTTGGTAACTACACGAGGGCATGAGCTTGTACCTTTTATTGCATAGCTATGACATAGAGACACAGTGAGCATCTTGCATGCAGTGGCCACGACTCGCTGAGTAGAGAGGTTTGTGATATGAATTTAATTTATACATCTCACTCGTGCAAAAAATGTAATAAAATTATAAATAAAACACAACACTAAATCCTCTGAACCAAACTCTAAATTCAATTTCAAAAAGTGTGCTTATCTGATAGGGCTTTGATGCCTAGGAAGTACAAATGTCTGTGTTTAGGGTGCATGATTTGGAAATCTAAGTTTCTAATGCCTGTGTTTAGATTGTTGGTTTTGAATTCCTATGTTTAGCTAATCTCTATTTAGTTTTTTTTTTTTTATTTTTTTTGAATTGTACATTCTAAATTATCATGTATGTGGATGAGGATTACACTCTCAAGTTCATTGATGATTATGTATGTAAACCAATGAACAATGGATTTAAAGATGTAATCCAATGCTAGAGCAACCTACAAGAAATGCATTTGCGAAGTCAGAAAAAATTATGCGACTTGGAATTGAAACTTGACAAAGAACATGCTCATAATCTGGCTCAGATAGAAGGACTCAAGACTGATTTACAAAAGCTCCAAAGTACATAGTCAAGAGCTCTAAAAGCAAAATACATAGTCAAGAGCTCTAAAAGCAAAATAAATAGCTCAATTTGCAGAATCTAGAGCTCAAGGCATAACATTAGGTAATCATGGGAATGATAGAGCAATCTGCCAGGTAGAATGATGTTCAGTTTAGATCCACATTGAGATATCTTCACGTAAAAATTTGTAGCATCATTCCTATATCTGAAGTCCCAACAAAAATATCAAGGCCTCTCACGCGAAATGATCCGAAAGTGTGTGGTGCGCAAGAACCTTCTCAACCGCCCCCTCAACCATAAATTTGGAGGTGTAGTTAATTTGGTTATCTTCTTTTGTAATTTTAACTTTTCACTTGTGTAACTTGTATTTCTTTTGTAATTATGATTTTTGCAATACAAGTACAACTTTTGATGCAATTATTACGTGTTTAGTTTTTCTTGTTGCAAGTTTGACTCCCTGTGTTTAAGTACTTTATTTTTCCTTTGTGCTTCAATGATAACTTCAATGATATGAATTATGTAAAATAAAGTTTCATTTATTATTTAGGCGTTTAACTTGTTAAGAAAACTTACTTAGGAAACATTTCTAGATAGTTCACTAGGGGAGCAAACTTTACCTCAAACCTCTTTTGTAATATTTTTCTGTGATAAATCTTATCATTCATTTTTAGCAATGTGGACATTGTCACATTCTAAATTTGGGGGTGTGCGAGGTCCCAGCTAAAGCTTTTGAAACTTTTTAAAAATCCCTATAATGCGTTTAAAAATAATACATTTCAACATAAGTTGAAACAAAGCCAAAATTGTGAAAATTTAAAAAATTATTTGATTATTTAATTAAATGAAATAACCAGTCTAATGTTGCTTCCTCTCGCCAAAAATAAGAAGCAAAGCTTCAAAACAAAAAATTTATAGTTGAGTAATAAGTAGCGATAAGAGTTACAGTTGAGGAGAGGAACAAACTCATAGAGTGGTAATAACTTGTAGCCTTTTATGTAAAATAATGAAGTTTAATTGCATAGGAATAGAAGAAAACAAAGAAAGTAGGCGATTTGATTATTTTGAGAATAACATGTTACAGAAGAACTCCATCCCTATTTTATTGTGTTTTAGTGCTCTAATAAGAAGATTTTAGGCAACAAAGTGAAGCCCGATGATATAATACTTATGCGAGAAAATGTACTATTCAACTTACGCAGCGACAAGCAAGCAAGCTAGGTGATATGAATCACTAGTAGACAAAATTAGTTAGCGCGAAAGTTAGAAAAAAGACGAAAAGACATCTGCGTGGTGTCAATGCAACTTTTCAGAAGCATTAATGATGCATGACATCCTGTCAACATTAATCTTTACCTATAATTGGACCCTCTCACTTCAGAACAAGGTATACAAAAATTGGCCGAAGAGCAAGTTTCTTATATCGTTCATCTTCTCTCTTCCCTTGAGTTAGACGTGAGAGCTTCAAATAAGAAAGGGAGATTTCATCTCTTTCCATCTTCCCCCTCACCACTAGGCAAAAATTAGATCCAAGAAGGACTAGAAATCATACTATGAGGTGTAGCTCTTTCTGATGTAATTCATTTTATATTGTTTTTAATGTATTGTTTTGTAAGATTGACATGGTCGTAAGGCCTAAAGTTATTTTTATGAATACAATGCATTTCTTTTGTCATTCTCCCATTTTTATGTTACTTTCCCTTTTTAATCTGGTTAATTAACTTGTTAGCAATGAATTATGTTTTTAATACCTAGAGAATCATAATGTTTGTATTATAAGTTTTGTTGAGTTAAGTGCGATATCAAAGCATCGTTTATTCGAGAGAAGGACAATGAGATTGATGGTAATCACCAGACAAGTGATAACACACAATCAGCTAAGCGAGTAGCGAAAAGGATGTAGCAATACGATCTTATCATCAATTTTAACCTTCGTATACATTGTAGAAATGTCAATGTGTTTGGTGAAAGCATCAAGAGGTTGCTCACCTTAATTAAGGAGAAATACTTATAATGCTTACAAAATTATTAGGTATAAATCATAAATTAACTTTGTGTAGTTGGATCCTGAAAGGCGAGCAAGTATGGTGAAAGCTCCGAGAGGCCACTCGACTTAATTCAAAGTTAATAGATGCTTTATACTATCTTGAATTATTAAAGCATAAGTCCCTTCTTTTAGATAATCAAACTATTCCTTCATATTCATGCCTAGAAATGAGTTTAATGCTCATTCTCATCATTTCAACATGCTCGTCTTGCACCGCTAAACACCTTAGTATAAATAGTCAGAGTAAAAACATATTTGTGCATAATCTTTATTGTATAGCTATACTGCCTGCTTTAGTCACACATTAAGAGAATTAGGATCTTAAATTCTTTATGTTTGACCCTGGACTTACCAGAAAACCTCTCTTCGCCTACACTTGGGTGATAGGGAAGAAAACTTGCACGACATGTATATCTTTAGAAAGCAACAATGGATGAATAGAAATGCACTTTTTTATGCATAATCCCATTGAGTCATCTAATAGTCGCTCACTTAGAGCCTACCATTATAAAGTCAGGATAGAAATTTATGCATAGATATCATGCCCAACCAAGTACCTAGGATTTTCCACTCAACGCCAAACGCTAAGTCAATAAATAAGTAAATAAAAAGTATTCTTTACCAAGAATGATTCAAAACTCTTCGAAAATTTTAATCATTTCTAAAAATTAAAAATAAGATTTTTCAAGGAAATTAACAAATATATTTTGAGTATTAAGCTTGCCACATAGAAATATTTTCATAGTGGGGAAGTACACGGTGAGAGTAAACTCTAAATGGTGAATAAGACTAAATCGCATTATGAGAAGTTTAGGGCGATGCAAATAGGAAGATAAGTCTTTGAGGTGGAATTGTGCTTGGAAACAAGCAGTGATACGAAGTGATGCTCGAGGATAAGCATTGTTCTAAATTTAGGGGTGTATGTGATAATGGTTGGAGTGCAACAACAGTGTGTTGGTTGCGACTTGGTCTTAATAATCTAATATCTGTGTAATGCAATTGCAATACGTTTCTAAGTAGGTTTATTACGTGTAATGTGTTCACCATGTCTTTCTATATTGTGTGCTTAATTCTAGGCGATACGTCATGAGTCATGATCATAGCATACGACATGCTCACTATGTACCTCTTTATCGCGTGAAACCTAAGTCATAATTGAATCCAAGTTTTTCTACTGCTTGTCCAAGTGCAAGCGAAACAGTAAGTTTATCTGGGTGATCTAGGGTTGAACACAAGAAATTGTTTCAAGACATTAGTTCTAAGGTGTTACTCATCAGTTAGGCGAATTGAAAGAATTAAAGAATAATGAATGTAAGAATTGCTAAACTAAGCAGCGAGATTCTATAAAGAGAGAGGATAAGAAAATAGCGTGATAATTTGATCTAACTTGTGTAACAGAGAAATGAAGGTAGAAATGTCTACATGTTACCACGCAGATAGATGATGAGATGACCTTGATGTGATTTAACTCACTAACCATACTTATGATTAAGGCATGCTTCTCTCGAAGTCATTATAAGTCACACATGGTTGCTTTCAGAGATTCATATGACTAAATATGAATTGACGAGTTATATTTGGAAGGAACTACTTATATCTGGAAGGAAGGCACTACTATCTCTCGGTACCTATGTCCACATTTGTTTTACAACGACCTAACTTTTATACTAAGCTAAGGTCATTGTCACTAAAACAAATAAAGATTCTTTATTTAAAATAAAAGAAAATATTAAAATTTAAAAGAAATAGTTCAAATATTTATTTATAAAATATATGTAAAATATGTAAAAAATAATAATAAATAAAATGTTAGTGAGGGCCCTATTTAAAATAGATAGAAAATTTCTAAACGTACTTGAAAGTTCTGAAACAAAATAATGTGAATCAAATACTGAAAACATAAAATGTCCCTTATGGCGAACTTACAGTCACTTCTTGTCATTCGCCGGCTTGCCTCTACGTCTACCCTTGCTTGAAAAATTAAACGTAGAAAAGAGTGAGTATAAATTTATACTTAGTAAGGGCCCACTAATAGTCCCGCTACGTGTATGTTAACTTCTCGTTAGAGTCCTATAAGAAAGTACCGCATATCTATTGTGCTCCCGAATGCATGCTATCTAGTGATCCCGTAGGGACATATCTAGGCTTTCGGTGAATCCAAAGGAACCACAGTAAAGGAGAGTCAAACTGTAAGTAATCTCGTCGAATCACACATAAAAGCTAGCCACATAGGCATAAATAGCGGTGATTCCGAGGGACACGCCCATATGATATGACTCTAACAAATAAAGCTAACAAAACATCATAGCCTATACATATAAAGTATAACATAAATATTATATCTCAATCACAATTTATCTCAACCATAGTATATACTCATTCATAACATATCATTTGTCATCACATATCTCAGTCATACATAATAACTTTCTATGTAGCTATCATTATCTAACATCCCTAACAATCACACCACATATGCATCATAGCTACGATAATGCATAGTACGGGAAAACATAATGTAAGGGTCTAATAGTAAATCTCTTACCTGGAGGCTAGCTAAAATAATATAGTCCTTTCCTGACAATCAGTTTCTAATGGACTCACTCCTCATCAAAACAAAATTAAAATTAATACTTTTGTCAACCCATCAATCAAATATTTACTTAATTAAGCATCCTAAATCCAAAGACTAAGGTTGAAACCAAGACAACCTTGCATGGGAACAACTTCACAACACTACACTTTTTTTTTCTCTAAAATGTCAACGACCTTCAAAGAGCAAATCTATATTTAATAAAATGCAACTTAAATCCAAAATTAAATTACTTTAAAAGTAACAATGAACTTGATATTTGATGGGTAACCCAAAAACCCAACGAATACGTACCAAAAGTGGCTCAAAGGTACTCAAATGCAACTTGGCTTGGGGAGAGGATTGTGGTTCACCTTGGAGAAGCAATCAGCTCGGGCAGGGAACCAGCTTGCGCAGACGTCTACGACTCGACTCTGGTGAAGGACGACTTGCACGCGAATGGGCGGAGCTCAATGGAGGAAACACACAAACGAAGGTTAGGCACAACAAATGGATGGGAATGCATGAAGACCGAACGACTTGGCAAAACAGCTTGGATGTCAACTGA

mRNA sequence

ATGTCAAGGTCAGAATCTAGAGCTCAAGGCATAACATTAGGTAATCATGGGAATGATAGAGCAATCTGCCAGGGAACCAGCTTGCGCAGACGTCTACGACTCGACTCTGGTGAAGGACGACTTGCACGCGAATGGGCGGAGCTCAATGGAGGAAACACACAAACGAAGGTTAGGCACAACAAATGGATGGGAATGCATGAAGACCGAACGACTTGGCAAAACAGCTTGGATGTCAACTGA

Coding sequence (CDS)

ATGTCAAGGTCAGAATCTAGAGCTCAAGGCATAACATTAGGTAATCATGGGAATGATAGAGCAATCTGCCAGGGAACCAGCTTGCGCAGACGTCTACGACTCGACTCTGGTGAAGGACGACTTGCACGCGAATGGGCGGAGCTCAATGGAGGAAACACACAAACGAAGGTTAGGCACAACAAATGGATGGGAATGCATGAAGACCGAACGACTTGGCAAAACAGCTTGGATGTCAACTGA

Protein sequence

MSRSESRAQGITLGNHGNDRAICQGTSLRRRLRLDSGEGRLAREWAELNGGNTQTKVRHNKWMGMHEDRTTWQNSLDVN
Homology
[Close]
BLAST of CsGy2G007860 vs. NCBI nr
Match: KGN61306.1 (hypothetical protein Csa_2G079090 [Cucumis sativus])

HSP 1 Score: 121.3 bits (303), Expect = 1.5e-24
Identity = 59/72 (81.94%), Postives = 61/72 (84.72%), Query Frame = 0 

Query: 8  AQGITLGNHGNDRAICQGTSLRRRLRLDSGEGRLAREWAELNGGNTQTKVRHNKWMGMHE 67
          A G   G+      + QGTSLRRRLRLDSGEGRLAREWAELNGGNTQTKVRHNKWMGMHE
Sbjct: 23 AWGEDCGSPWRSNQLGQGTSLRRRLRLDSGEGRLAREWAELNGGNTQTKVRHNKWMGMHE 82

Query: 68 DRTTWQNSLDVN 80
          DRTTWQNSLDVN
Sbjct: 83 DRTTWQNSLDVN 94

[Close]
BLAST of CsGy2G007860 vs. TrEMBL
Match: tr|A0A0A0LMV3|A0A0A0LMV3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G079090 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 9.6e-25
Identity = 59/72 (81.94%), Postives = 61/72 (84.72%), Query Frame = 0 

Query: 8  AQGITLGNHGNDRAICQGTSLRRRLRLDSGEGRLAREWAELNGGNTQTKVRHNKWMGMHE 67
          A G   G+      + QGTSLRRRLRLDSGEGRLAREWAELNGGNTQTKVRHNKWMGMHE
Sbjct: 23 AWGEDCGSPWRSNQLGQGTSLRRRLRLDSGEGRLAREWAELNGGNTQTKVRHNKWMGMHE 82

Query: 68 DRTTWQNSLDVN 80
          DRTTWQNSLDVN
Sbjct: 83 DRTTWQNSLDVN 94

The following BLAST results are available for this feature:
BLAST of CsGy2G007860 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61306.11.5e-2481.94hypothetical protein Csa_2G079090 [Cucumis sativus][more]
BLAST of CsGy2G007860 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy2G007860 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy2G007860 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LMV3|A0A0A0LMV3_CUCSA9.6e-2581.94Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G079090 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G007860.1CsGy2G007860.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy2G007860Csa2G079090Cucumber (Chinese Long) v2cgybcuB056
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy2G007860Cucurbita maxima (Rimu)cgybcmaB169
CsGy2G007860Cucurbita maxima (Rimu)cgybcmaB252
CsGy2G007860Cucurbita moschata (Rifu)cgybcmoB161
CsGy2G007860Cucurbita moschata (Rifu)cgybcmoB240
CsGy2G007860Cucurbita moschata (Rifu)cgybcmoB246
CsGy2G007860Cucurbita pepo (Zucchini)cgybcpeB163
CsGy2G007860Cucurbita pepo (Zucchini)cgybcpeB261
CsGy2G007860Bottle gourd (USVL1VR-Ls)cgyblsiB089
CsGy2G007860Melon (DHL92) v3.6.1cgybmedB115
CsGy2G007860Melon (DHL92) v3.5.1cgybmeB117
CsGy2G007860Watermelon (Charleston Gray)cgybwcgB102
CsGy2G007860Watermelon (97103) v1cgybwmB148
CsGy2G007860Wild cucumber (PI 183967)cgybcpiB056
CsGy2G007860Silver-seed gourdcarcgybB0490
CsGy2G007860Cucumber (Chinese Long) v3cgybcucB064
CsGy2G007860Watermelon (97103) v2cgybwmbB104
CsGy2G007860Wax gourdcgybwgoB132