CsGy2G007220 (gene) Cucumber (Gy14) v2

NameCsGy2G007220
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr2 : 5752391 .. 5752878 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATGTCAATCCCGAACATGATGCATCTATATGTCAATGTGAGTAGGATGGGTTTGGCTATAAACCTGAATTCTAAATCATTTGGTCAGTTTGAAGACCAAACTCAGGTTATTGACTCTGACTCTGAACCAGCTGCATTGACAGTATACGACGATGAAGAAATGATGGCTAATAATGAATATAGGAACTTTCGAACAAAAACGGACGATGAATTTGACTTTGACGATCGTGAACATGAATTACCATCAAAGATATTCACGTAGATAGATATGAATGTAATAGATAGTATTTGTGAGTACATCCCAACTGTAGACCTTGTGGTTGCAGGGTTGTTGACAATTCCGAACTGTACAAGGGAATGATATGTCAAGATAAAGAAACACTTCAACATATGGTAAAATGTTTTACCATTAACAATCACGCACCATATGAGGTAGTGGAATCAACAATTCGATGTAAGATGTGGCAAAAGGTTACACGTTGA

mRNA sequence

ATGGCAATGTCAATCCCGAACATGATGCATCTATATGTCAATGTGAGTAGGATGGGTTTGGCTATAAACCTGAATTCTAAATCATTTGGTCAGTTTGAAGACCAAACTCAGGTTATTGACTCTGACTCTGAACCAGCTGCATTGACAGTATACGACGATGAAGAAATGATGGCTAATAATGAATATAGGAACTTTCGAACAAAAACGGACGATGAATTTGACTTTGACGATCGTGAACATGAATTACCATCAAAGATATTCACGGTTGTTGACAATTCCGAACTGTACAAGGGAATGATATGTCAAGATAAAGAAACACTTCAACATATGGTAAAATGTTTTACCATTAACAATCACGCACCATATGAGGTAGTGGAATCAACAATTCGATGTAAGATGTGGCAAAAGGTTACACGTTGA

Coding sequence (CDS)

ATGGCAATGTCAATCCCGAACATGATGCATCTATATGTCAATGTGAGTAGGATGGGTTTGGCTATAAACCTGAATTCTAAATCATTTGGTCAGTTTGAAGACCAAACTCAGGTTATTGACTCTGACTCTGAACCAGCTGCATTGACAGTATACGACGATGAAGAAATGATGGCTAATAATGAATATAGGAACTTTCGAACAAAAACGGACGATGAATTTGACTTTGACGATCGTGAACATGAATTACCATCAAAGATATTCACGGTTGTTGACAATTCCGAACTGTACAAGGGAATGATATGTCAAGATAAAGAAACACTTCAACATATGGTAAAATGTTTTACCATTAACAATCACGCACCATATGAGGTAGTGGAATCAACAATTCGATGTAAGATGTGGCAAAAGGTTACACGTTGA

Protein sequence

MAMSIPNMMHLYVNVSRMGLAINLNSKSFGQFEDQTQVIDSDSEPAALTVYDDEEMMANNEYRNFRTKTDDEFDFDDREHELPSKIFTVVDNSELYKGMICQDKETLQHMVKCFTINNHAPYEVVESTIRCKMWQKVTR
BLAST of CsGy2G007220 vs. NCBI nr
Match: XP_008456454.1 (PREDICTED: uncharacterized protein LOC103496397 [Cucumis melo])

HSP 1 Score: 111.7 bits (278), Expect = 2.0e-21
Identity = 70/147 (47.62%), Postives = 84/147 (57.14%), Query Frame = 0

Query: 18  MGLAINLNSKSFGQFEDQTQVIDSDSEPAALTVYDDEEMMANNEYRNFRTKTDDEF---D 77
           + L INLN +         + +D D E  A  V  +EEM+A NEY  FRTKTDDEF   D
Sbjct: 2   VNLTINLNVEP----RYVEEYVDVDPESDAPPVCHEEEMVATNEYTEFRTKTDDEFEEMD 61

Query: 78  FDDREHELPSKIFT--------------------VVDNSELYKGMICQDKETLQHMVKCF 137
           FD  E+E+PS  FT                    V+DN++LY GMIC++KE LQHMVKCF
Sbjct: 62  FDGCEYEVPSNTFTNLDMDAVDDIQEHDPIIVPMVIDNTKLYMGMICENKEMLQHMVKCF 121

BLAST of CsGy2G007220 vs. NCBI nr
Match: XP_022143566.1 (uncharacterized protein LOC111013435 [Momordica charantia])

HSP 1 Score: 90.5 bits (223), Expect = 4.8e-15
Identity = 57/165 (34.55%), Postives = 90/165 (54.55%), Query Frame = 0

Query: 1   MAMSIPNMMHLYVNVSRMGLAINLNSKSFGQFEDQTQVIDSDSE---PAALTVYDDEEMM 60
           +A+S P ++ L+VNV  M + ++L+ +   Q  + +Q +D + E   P    + +D +++
Sbjct: 67  IALSCPQLVELHVNVRNM-INVSLDHEEPSQCLEHSQCLDLEPELVVPPVTHLDEDMDLI 126

Query: 61  ANNEYRNFRTKTDDEFDFDD--REHELPSKIFTVV--------------------DNSEL 120
           A++ +   RT TDDEFD  D   EH++PS  F  +                    +N  L
Sbjct: 127 ADDRFIELRTITDDEFDELDLEGEHDIPSPTFNDIANDMVNCNAEHDSIIQPLPAENDML 186

Query: 121 YKGMICQDKETLQHMVKCFTINNHAPYEVVES-----TIRCKMWQ 136
           YK  +C DKET+QH+VKCF + +H PY++VES      IRCK WQ
Sbjct: 187 YKRFMCNDKETMQHIVKCFALRSHHPYKLVESAPSKWVIRCKKWQ 230

BLAST of CsGy2G007220 vs. NCBI nr
Match: XP_022156564.1 (uncharacterized protein LOC111023439 [Momordica charantia])

HSP 1 Score: 82.8 bits (203), Expect = 1.0e-12
Identity = 56/161 (34.78%), Postives = 83/161 (51.55%), Query Frame = 0

Query: 1   MAMSIPNMMHLYVNVSRMGLAINLNSKSFGQFEDQTQVIDSDSE---PAALTVYDDEEMM 60
           +A+  P +  L+VNV  M + ++LN +   +  D +Q +  + E   P    + +D ++ 
Sbjct: 40  IALPCPQLAELFVNVRNM-MNVSLNLEVPSKCLDHSQCLVPELELVVPPMTNLDEDMDLT 99

Query: 61  ANNEYRNFRTKTDDEFDFDD--REHELPSKIF----------------TVVDNSELYKGM 120
           A+N + + +T  DDEFD  D   EH++ S+ F                    N  LYKG 
Sbjct: 100 ADNRFIDLKTTIDDEFDELDLEGEHDIYSQTFNDMVNNIAEHDSIFQPVAAKNEMLYKGF 159

Query: 121 ICQDKETLQHMVKCFTINNHAPYEVVES-----TIRCKMWQ 136
            C DKET+QH+VK F +NNH  YEV+ES      IRCK WQ
Sbjct: 160 RCSDKETMQHIVKHFVVNNHHTYEVIESVPSKWVIRCKKWQ 199

BLAST of CsGy2G007220 vs. NCBI nr
Match: XP_022143642.1 (uncharacterized protein LOC111013502 [Momordica charantia])

HSP 1 Score: 66.2 bits (160), Expect = 9.8e-08
Identity = 29/51 (56.86%), Postives = 36/51 (70.59%), Query Frame = 0

Query: 90  VDNSELYKGMICQDKETLQHMVKCFTINNHAPYEVVEST-----IRCKMWQ 136
           V+N  LYKG +C DK T+QH+VK F + +H PYEVVEST     +RCK WQ
Sbjct: 7   VENDMLYKGFMCNDKRTMQHIVKRFAVKSHHPYEVVESTPSIWAVRCKKWQ 57

BLAST of CsGy2G007220 vs. NCBI nr
Match: XP_022151714.1 (uncharacterized protein LOC111019626 [Momordica charantia])

HSP 1 Score: 62.8 bits (151), Expect = 1.1e-06
Identity = 27/51 (52.94%), Postives = 36/51 (70.59%), Query Frame = 0

Query: 90  VDNSELYKGMICQDKETLQHMVKCFTINNHAPYEVVEST-----IRCKMWQ 136
           V+N  LYKG +C DK+T+QH+VK F + +H PY+VVE T     +RCK WQ
Sbjct: 3   VENDMLYKGFMCNDKKTMQHIVKRFAVKSHHPYKVVELTPSIWAVRCKKWQ 53

BLAST of CsGy2G007220 vs. TrEMBL
Match: tr|A0A1S3C4J7|A0A1S3C4J7_CUCME (uncharacterized protein LOC103496397 OS=Cucumis melo OX=3656 GN=LOC103496397 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.3e-21
Identity = 70/147 (47.62%), Postives = 84/147 (57.14%), Query Frame = 0

Query: 18  MGLAINLNSKSFGQFEDQTQVIDSDSEPAALTVYDDEEMMANNEYRNFRTKTDDEF---D 77
           + L INLN +         + +D D E  A  V  +EEM+A NEY  FRTKTDDEF   D
Sbjct: 2   VNLTINLNVEP----RYVEEYVDVDPESDAPPVCHEEEMVATNEYTEFRTKTDDEFEEMD 61

Query: 78  FDDREHELPSKIFT--------------------VVDNSELYKGMICQDKETLQHMVKCF 137
           FD  E+E+PS  FT                    V+DN++LY GMIC++KE LQHMVKCF
Sbjct: 62  FDGCEYEVPSNTFTNLDMDAVDDIQEHDPIIVPMVIDNTKLYMGMICENKEMLQHMVKCF 121

BLAST of CsGy2G007220 vs. TrEMBL
Match: tr|E5GCF3|E5GCF3_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.3e-04
Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 0

Query: 1   MAMSIPNMMHLYVNVSRMGLAINLNSKSFGQFEDQTQVIDSDSEPAALTVYDDEEMMANN 60
           +A+  PNM+HLYV VS +  AINLN +     +   + +D D +  A  V  +EEM+A N
Sbjct: 49  IALPFPNMVHLYVTVSMIDSAINLNVEP----KYVEEYVDVDPKSDAPPVCHEEEMVATN 108

Query: 61  EYRNFRTKTDDE 73
           EY  FRT+TDD+
Sbjct: 109 EYTEFRTETDDD 116

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008456454.12.0e-2147.62PREDICTED: uncharacterized protein LOC103496397 [Cucumis melo][more]
XP_022143566.14.8e-1534.55uncharacterized protein LOC111013435 [Momordica charantia][more]
XP_022156564.11.0e-1234.78uncharacterized protein LOC111023439 [Momordica charantia][more]
XP_022143642.19.8e-0856.86uncharacterized protein LOC111013502 [Momordica charantia][more]
XP_022151714.11.1e-0652.94uncharacterized protein LOC111019626 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3C4J7|A0A1S3C4J7_CUCME1.3e-2147.62uncharacterized protein LOC103496397 OS=Cucumis melo OX=3656 GN=LOC103496397 PE=... [more]
tr|E5GCF3|E5GCF3_CUCME4.3e-0444.44Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G007220.1CsGy2G007220.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None