CsGy2G006260 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGGCGTTATAGTGGCATCTAAGAGCGACAAATGTAGAAGATTTGAGAGGGGTTTACGACAGAAGATCGAAAATAGAAAAATGGACTAACTTTTCCAATTGGTAGAGACAACTTTGAGAGTAGAGTAGAGCAGAGCATAGAGGGACCAAGGCTAGTGGTGGATCTTAGTAGAGGAGTTCCTTTGGCAAGCAGCTTTAGAGGCACACCTGGTGTATCAGGTAAACGAGATTTCAAGGGCCATTCTGGTGGCCCACCCTCGAGGCAGTGTAGTTCAAGGAGTTCCTCCCAAAGGCCGAGTCAAAGGATTTCAAGTCAGCCACCAAGACAACGTAGTCTATCACGCACTATTATGCACGCATCCTTAAACTTACAATGCGACACGCAATGCGACTTGAGCAACTCTGACATCTCTAATGCAAAATGCGAGAATGCTCTACTTAAGTACTTGAATTTATCAATTAGACTTAAAACTATTATGCAATAGAGATAACATAACATAGCCAATGGGAAATAACAACACTTCTCTTTATTAACTTTAAACCTTGCATTCCAATATTACACTTTACAAGTTTCCTTAATACATGAATTAAGCAATTAACCTTAACGCCTTACTTAGCTCCCATAAAATTGAGATGCATCCCTTTTAGTAAAAGACCTTTATATACATAATAATTTCCTATTTACAAAAATTACAAAATAAAAGAACTTAGATCACATGCTCAGCTTCCACGTATAGCAACCCATTGTATCCTTCCTTACTCGGCCTTATTTTCTGATTACCTAGAAAGAAAAAACTTAAATCGTAAGTCAAAGACTTAGTGAGTGATACTTCCAAAAAACTTTTTTGGACATACAAAGCATTCAAATCATTTAATCAAATAGGCTTTAATGCCTCATTTTCAGTAGAATGTAAATACACATTAGCCTTTCATATTTCTTTCACCAAGAACATGAATCATTTCCACGCGTAGACTATTGTGATGTCTTTTTCATTCAACATCCTTTAGAGAATTTCTCAATTCATTTTCCTATTGCTCAGACCGCAAAGCTCCGCATTGGCTAGCTTCACCTCCACCACAAATTCCTTTTCTACGTGGCTATTTATACTCCTTATGTGCATATAATAGTTAGTTCATTAATAGGAATAAGACTAATGGTTTACAAAACAACATACCATTCAATAAAATCATCAAACGTAAGACAAGCTTACTTTTAAACTCAATCTTTTATAACATTCACGTATAAAATATCATTACAAATGAGGAGTTTAGAAAGAAGCTTTGAAAAACATTTAAACGTTTTGGAAATTCACTCATAAATCCAAAGTTTCCTTTTAGCCCCCAACGCCTTGTCTTCAAGCTCCTTCTTGCCTAATCTCTTCTTTTTTCAACAGAATAACACTAACGATTTTTGCATAATAATCATTTTACCGTCCCTTTTCCTATATTTATACTAATCTAAAAAATAGATTAGTCATCCTTAAGTCCTTATTAACTTGCCAACTCCTATTTGAAAATTTACACGTGTAAGCTCTATGTTTATCTTGGGCATGCTTAACTTAAATTCTTACATGTGCTCATTAAATATACTTAGAAAAATTTCCAAAAAAATCCTAATTTCTTTATTAGTCAACTTGTCTCGTAATGTAATGAACTCTAGAACGCCTAATGCATACTTGCTCACCTTTTCTTCTCGTCGCCTAAACTTATTGTCAAGCCTCAAACGCATCTTCCTTCCTCACATCGCCTAGCCTTTCATGACTCAACAAAAACATTTAGCTTCTCAAGCATTTGTTTTTCAAAGCCTTCTTAAAAAATTCATACTAAAATACTTATTTTGAAAATTGACCCTTCTGTCCAGGTACGAGTCTTACACAGTGTCTCAAGCAGGGCGAGAGTTTGTGGCTAACGTAGCAAAATCACGGATAAACATACCTTTGTGTCGATGTGAGTAAGTTTCAAATTCGAATTGCCTCTGTTTGATAAGAGCGATCCTCCAAATTCGTATCACCAAAACGATGTGAAATCACTAGCGTTCTCTGGCAGCATCCATACACGAACTGGGAATTCGACTCATCGAATTCAAGTCCGCTAGAACCACTAAGAATGGGAATTTTGACTCTCCTCGAATTCTCTTTCTATGTCAAACGAAATTTATTTTCTCGGATGTATAAAATAAAACGCCTAAGGCCTTATTTATAAGTTCCTTAGGGTTTTCTAATAACAACTCAAGGATTTCTAATAACTTACGGTTTCCTAATAAGCTTCCAATTACTTATTAATTACCTAGTTCAAAGATAAATTTGACTCAGTTCTTTTGTGTGTGACCCGTTAGGGTAATTTAATATGGAAATGAGCTCATAACTCGCATGGGTCTCTGGCAAGACATTATAACTACCCATATTAAATTAAGTCGGTGATCCAACATAACCTAATATAGTTATTGCTTTCATCTTTTTATCATGCGATATCCATAATTGAATATAAGGCATGGACAAAGTCACCTTATCTAATTCAATTTCTTTTTCGATCAATAAGAATATTAAAATAATAAATGACATTAATACCCTTATTAATTCATTTTTAGACGACCATGCATTTTCACAGTCACACTTAATCAAGGGGTCCAAAGATATCTCTCCGTAACAAGAGAGATAAATTCCATCTTGATTAATCATTGTCAACTACGTAATTCATAGTGTATTCGAGTACAACCTTTATAATTATCTAGTTAAAGATAATGTTTGATTGCATTAAAATAGATTAATTCCTAGGTTTGACACAATGATAACCTTAGGTCTAAGAATAAAAACAATCAATCATTTAAGATTATTTATGACACATGTCCATGTAATAATCTCAAAAAAGGGATCGATCTAATTCTTAATCTCTAATAAGAAAATATGATTATAATTTATGTCTTTACATATATAATCATCCAATGATTATCAATTAAAACTCATACTGATCTTAATTTATTATTGTTCCCACAATAATAATCAATTAGGGACATTTAGAATATAATAACATATTCATGGATATTATTATACAATAACATACAATTGAATAATAATGAGAACAATACATTTTATTAAATAATTAAGCAATAAATCAATTATCCATAAAATACTTATAGAGCACAATAAAAAAAAAACCAACAAGATCGACATTATGACTCAGCATGAGGGGGAGGATGTACCAAACATCATTACTAGTACAGTTCTTATTTGTAATACTCACGCTTATGTTTTATTAGACCCAAGTGCTACACATTCTTTTGTGTCTTGCTATTTTATAAGTGAGTAAGAGGGTAGAGTCGTTAGCAGAGATGTTAGTTATTTATAACCCTATTGGTAACAAAATGCTAGTTAGCAAGGTACTGCGAGGTTGTGAAGTCCTAGTGGAAATTGTCAATTTACCAGTAGACCTTTTGCCACTTGTGTTACAAGAGCTAGATGTGATTCTTGGAATGGACTTCCTGTATACACATTTTGCTTTTATGAACTACCATAGGAAGGAAGTAGTTTTTAGAAAACCAATATTTCTAGAGGTTGTGTTCAGAGGCTAG ATGTCGGCAGACAACTTTGAGAGTAGAGTAGAGCAGAGCATAGAGGGACCAAGGCTAGTGGTGGATCTTAGTAGAGGAGTTCCTTTGGCAAGCAGCTTTAGAGGCACACCTGGTGTATCAGTGAGTAAGAGGGTAGAGTCGTTAGCAGAGATGTTAGTTATTTATAACCCTATTGGTAACAAAATGCTAGTTAGCAAGGTACTGCGAGGTTGTGAAGTCCTAGTGGAAATTGTCAATTTACCAGTAGACCTTTTGCCACTTGTGTTACAAGAGCTAGATGTGATTCTTGGAATGGACTTCCTGTATACACATTTTGCTTTTATGAACTACCATAGGAAGGAAGTAGTTTTTAGAAAACCAATATTTCTAGAGGTTGTGTTCAGAGGCTAG ATGTCGGCAGACAACTTTGAGAGTAGAGTAGAGCAGAGCATAGAGGGACCAAGGCTAGTGGTGGATCTTAGTAGAGGAGTTCCTTTGGCAAGCAGCTTTAGAGGCACACCTGGTGTATCAGTGAGTAAGAGGGTAGAGTCGTTAGCAGAGATGTTAGTTATTTATAACCCTATTGGTAACAAAATGCTAGTTAGCAAGGTACTGCGAGGTTGTGAAGTCCTAGTGGAAATTGTCAATTTACCAGTAGACCTTTTGCCACTTGTGTTACAAGAGCTAGATGTGATTCTTGGAATGGACTTCCTGTATACACATTTTGCTTTTATGAACTACCATAGGAAGGAAGTAGTTTTTAGAAAACCAATATTTCTAGAGGTTGTGTTCAGAGGCTAG MSADNFESRVEQSIEGPRLVVDLSRGVPLASSFRGTPGVSVSKRVESLAEMLVIYNPIGNKMLVSKVLRGCEVLVEIVNLPVDLLPLVLQELDVILGMDFLYTHFAFMNYHRKEVVFRKPIFLEVVFRG
BLAST of CsGy2G006260 vs. NCBI nr
Match: XP_016901625.1 (PREDICTED: uncharacterized protein LOC107991320 [Cucumis melo]) HSP 1 Score: 102.8 bits (255), Expect = 8.7e-19 Identity = 53/89 (59.55%), Postives = 71/89 (79.78%), Query Frame = 0
BLAST of CsGy2G006260 vs. NCBI nr
Match: XP_020524782.1 (uncharacterized protein LOC110007560 [Amborella trichopoda]) HSP 1 Score: 75.1 bits (183), Expect = 2.0e-10 Identity = 37/78 (47.44%), Postives = 53/78 (67.95%), Query Frame = 0
BLAST of CsGy2G006260 vs. NCBI nr
Match: XP_022855167.1 (uncharacterized protein LOC111376436 [Olea europaea var. sylvestris]) HSP 1 Score: 72.4 bits (176), Expect = 1.3e-09 Identity = 38/84 (45.24%), Postives = 52/84 (61.90%), Query Frame = 0
BLAST of CsGy2G006260 vs. NCBI nr
Match: XP_011625197.1 (uncharacterized protein LOC105421034 [Amborella trichopoda]) HSP 1 Score: 70.9 bits (172), Expect = 3.7e-09 Identity = 33/78 (42.31%), Postives = 52/78 (66.67%), Query Frame = 0
BLAST of CsGy2G006260 vs. NCBI nr
Match: XP_008465228.1 (PREDICTED: uncharacterized protein LOC103502884 [Cucumis melo]) HSP 1 Score: 68.9 bits (167), Expect = 1.4e-08 Identity = 37/65 (56.92%), Postives = 50/65 (76.92%), Query Frame = 0
BLAST of CsGy2G006260 vs. TrEMBL
Match: tr|A0A1S4E0X6|A0A1S4E0X6_CUCME (uncharacterized protein LOC107991320 OS=Cucumis melo OX=3656 GN=LOC107991320 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 5.8e-19 Identity = 53/89 (59.55%), Postives = 71/89 (79.78%), Query Frame = 0
BLAST of CsGy2G006260 vs. TrEMBL
Match: tr|A0A1S3CNE9|A0A1S3CNE9_CUCME (uncharacterized protein LOC103502884 OS=Cucumis melo OX=3656 GN=LOC103502884 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 9.3e-09 Identity = 37/65 (56.92%), Postives = 50/65 (76.92%), Query Frame = 0
BLAST of CsGy2G006260 vs. TrEMBL
Match: tr|A0A2P6RYR8|A0A2P6RYR8_ROSCH (Putative nucleotidyltransferase, Ribonuclease H OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0145931 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 2.7e-08 Identity = 38/73 (52.05%), Postives = 49/73 (67.12%), Query Frame = 0
BLAST of CsGy2G006260 vs. TrEMBL
Match: tr|A0A1R3KCL6|A0A1R3KCL6_9ROSI (Retroviral aspartyl protease OS=Corchorus olitorius OX=93759 GN=COLO4_09262 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 6.0e-08 Identity = 37/85 (43.53%), Postives = 53/85 (62.35%), Query Frame = 0
BLAST of CsGy2G006260 vs. TrEMBL
Match: tr|A0A2P6RHV2|A0A2P6RHV2_ROSCH (Putative nucleotidyltransferase, Ribonuclease H OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0084311 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.0e-07 Identity = 37/73 (50.68%), Postives = 46/73 (63.01%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |