CsGy2G006240 (gene) Cucumber (Gy14) v2

Overview
NameCsGy2G006240
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Description50S ribosomal protein L2, chloroplastic
LocationChr2 : 4561546 .. 4562016 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTAAAATCCAATCCACGAAATAATTTGATCTATGGACAGCATCGTTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGACGGAATGAAAAAGACATATATGGTAGAAGCATAACGGCCCTATTGTTCCTATGGAGAGAAGAACCTATGATTAGCTTTTCGGGAAATTTCCAAACATAATTATCTTGAATATATTAACTATTTCTTTATTTTCCGATCGCCTGGAAGGGACAAAATGGAGATTCTTAATTATTCGTAATTAATTATTTCTTAATTTATTTTATAGAAATTCCCAAAAATCTCTTCATATACTCAGTCAAACTCGAACCCGGCGCCGGGTTCAAATTGAATTAA

mRNA sequence

ATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTAAAATCCAATCCACGAAATAATTTGATCTATGGACAGCATCGTTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGACGGAATGAAAAAGACATATATGAAATTCCCAAAAATCTCTTCATATACTCAGTCAAACTCGAACCCGGCGCCGGGTTCAAATTGAATTAA

Coding sequence (CDS)

ATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTAAAATCCAATCCACGAAATAATTTGATCTATGGACAGCATCGTTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGACGGAATGAAAAAGACATATATGAAATTCCCAAAAATCTCTTCATATACTCAGTCAAACTCGAACCCGGCGCCGGGTTCAAATTGAATTAA

Protein sequence

MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYEIPKNLFIYSVKLEPGAGFKLN
Homology
[Close]
BLAST of CsGy2G006240 vs. NCBI nr
Match: YP_009166935.1 (ribosomal protein L2 (chloroplast) [Osyris alba] >ALC75235.1 ribosomal protein L2 (chloroplast) [Osyris alba])

HSP 1 Score: 156.0 bits (393), Expect = 6.4e-35
Identity = 77/99 (77.78%), Postives = 85/99 (85.86%), Query Frame = 0 

Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPR NLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRTNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 RKIDFRRNEKDIY-----EIPKNLFIYSVKLEPGAGFKL 95
          RKIDFRRNEKDIY     ++P    I+++++  G G +L
Sbjct: 61 RKIDFRRNEKDIYGRIVTDMPLGTAIHNIEITLGKGGQL 99

[Close]
BLAST of CsGy2G006240 vs. NCBI nr
Match: YP_740517.1 (ribosomal protein L2 (chloroplast) [Citrus sinensis] >YP_740541.1 ribosomal protein L2 (chloroplast) [Citrus sinensis] >YP_009059390.1 ribosomal protein L2 (chloroplast) [Citrus aurantiifolia] >YP_009059418.1 ribosomal protein L2 (chloroplast) [Citrus aurantiifolia] >YP_009253688.1 ribosomal protein L2 (chloroplast) [Citrus platymamma] >YP_009253711.1 ribosomal protein L2 (chloroplast) [Citrus platymamma] >YP_009320138.1 ribosomal protein L2 (chloroplast) [Citrus depressa] >YP_009320160.1 ribosomal protein L2 (chloroplast) [Citrus depressa] >YP_009333813.1 ribosomal protein L2 (chloroplast) [Clausena excavata] >YP_009333984.1 ribosomal protein L2 (chloroplast) [Glycosmis pentaphylla] >YP_009353528.1 ribosomal protein L2 (plastid) [Citrus maxima] >YP_009353552.1 ribosomal protein L2 (plastid) [Citrus maxima] >YP_009364797.1 ribosomal protein L2 (plastid) [Citrus reticulata] >YP_009364821.1 ribosomal protein L2 (plastid) [Citrus reticulata] >YP_009365865.1 ribosomal protein L2 (plastid) [Citrus limon] >YP_009365893.1 ribosomal protein L2 (plastid) [Citrus limon] >Q09MB2.1 RecName: Full=50S ribosomal protein L2, chloroplastic >ABI49060.1 ribosomal protein L2 (chloroplast) [Citrus sinensis] >ABI49086.1 ribosomal protein L2 (chloroplast) [Citrus sinensis] >AIL50327.1 ribosomal protein L2 (chloroplast) [Citrus aurantiifolia] >AIL50355.1 ribosomal protein L2 (chloroplast) [Citrus aurantiifolia] >ALI86704.1 ribosomal protein L2 (chloroplast) [Citrus platymamma] >ALI86725.1 ribosomal protein L2 (chloroplast) [Citrus platymamma] >AOZ20767.1 ribosomal protein L2 (chloroplast) [Clausena excavata] >AOZ20938.1 ribosomal protein L2 (chloroplast) [Glycosmis pentaphylla] >BAV89982.1 ribosomal protein L2 (chloroplast) [Citrus depressa] >BAV90005.1 ribosomal protein L2 (chloroplast) [Citrus depressa] >AQX91160.1 ribosomal protein L2 (plastid) [Citrus maxima] >AQX91184.1 ribosomal protein L2 (plastid) [Citrus maxima] >ARI49972.1 ribosomal protein L2 (plastid) [Citrus reticulata] >ARI49996.1 ribosomal protein L2 (plastid) [Citrus reticulata] >ARJ61341.1 ribosomal protein L2 (plastid) [Citrus limon] >ARJ61342.1 ribosomal protein L2 (plastid) [Citrus limon] >BBD74123.1 ribosomal protein L2 (chloroplast) [Citrus depressa] >BBD74147.1 ribosomal protein L2 (chloroplast) [Citrus depressa])

HSP 1 Score: 152.9 bits (385), Expect = 5.4e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 RKIDFRRNEKDIY 74
          RKIDFRRNEKDIY
Sbjct: 61 RKIDFRRNEKDIY 73

[Close]
BLAST of CsGy2G006240 vs. NCBI nr
Match: YP_009107017.1 (ribosomal protein L2 (chloroplast) [Sapindus mukorossi] >YP_009262270.1 ribosomal protein L2 (chloroplast) [Spondias bahiensis] >YP_009262245.1 ribosomal protein L2 (chloroplast) [Spondias bahiensis] >YP_009262356.1 ribosomal protein L2 (chloroplast) [Spondias tuberosa] >YP_009262331.1 ribosomal protein L2 (chloroplast) [Spondias tuberosa] >YP_009383693.1 ribosomal protein L2 (plastid) [Pistacia vera] >YP_009383671.1 ribosomal protein L2 (plastid) [Pistacia vera] >YP_009431536.1 ribosomal protein L2 (chloroplast) [Spondias mombin] >YP_009431514.1 ribosomal protein L2 (chloroplast) [Spondias mombin] >YP_009477759.1 ribosomal protein L2 (chloroplast) [Pistacia weinmaniifolia] >ABV59097.2 ribosomal protein L2 (chloroplast) [Mangifera indica] >AIT96763.1 ribosomal protein L2 (chloroplast) [Sapindus mukorossi] >ANI86739.1 ribosomal protein L2 (chloroplast) [Spondias bahiensis] >ANI86740.1 ribosomal protein L2 (chloroplast) [Spondias bahiensis] >ANI86825.1 ribosomal protein L2 (chloroplast) [Spondias tuberosa] >ANI86826.1 ribosomal protein L2 (chloroplast) [Spondias tuberosa] >ARS43801.1 ribosomal protein L2 (plastid) [Pistacia vera] >ARS43802.1 ribosomal protein L2 (plastid) [Pistacia vera] >ASY95772.1 ribosomal protein L2 (chloroplast) [Spondias mombin] >ASY95773.1 ribosomal protein L2 (chloroplast) [Spondias mombin] >AVN66959.1 ribosomal protein L2 (chloroplast) [Pistacia weinmaniifolia])

HSP 1 Score: 152.9 bits (385), Expect = 5.4e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 RKIDFRRNEKDIY 74
          RKIDFRRNEKDIY
Sbjct: 61 RKIDFRRNEKDIY 73

[Close]
BLAST of CsGy2G006240 vs. NCBI nr
Match: ADM92727.1 (ribosomal protein L2, partial (chloroplast) [Davidia involucrata])

HSP 1 Score: 152.9 bits (385), Expect = 5.4e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 RKIDFRRNEKDIY 74
          RKIDFRRNEKDIY
Sbjct: 61 RKIDFRRNEKDIY 73

[Close]
BLAST of CsGy2G006240 vs. NCBI nr
Match: AEK71414.1 (ribosomal protein L2 (plastid) [Schinus terebinthifolia])

HSP 1 Score: 152.9 bits (385), Expect = 5.4e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 RKIDFRRNEKDIY 74
          RKIDFRRNEKDIY
Sbjct: 61 RKIDFRRNEKDIY 73

[Close]
BLAST of CsGy2G006240 vs. TAIR10
Match: ATCG00830.1 (ribosomal protein L2)

HSP 1 Score: 142.1 bits (357), Expect = 1.7e-34
Identity = 69/73 (94.52%), Postives = 69/73 (94.52%), Query Frame = 0 

Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLI GQH CGKGRNARGIITA HRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLICGQHHCGKGRNARGIITARHRGGGHKRLY 60

Query: 61 RKIDFRRNEKDIY 74
          RKIDFRRN KDIY
Sbjct: 61 RKIDFRRNAKDIY 73

[Close]
BLAST of CsGy2G006240 vs. TAIR10
Match: ATCG01310.1 (ribosomal protein L2)

HSP 1 Score: 142.1 bits (357), Expect = 1.7e-34
Identity = 69/73 (94.52%), Postives = 69/73 (94.52%), Query Frame = 0 

Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLI GQH CGKGRNARGIITA HRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLICGQHHCGKGRNARGIITARHRGGGHKRLY 60

Query: 61 RKIDFRRNEKDIY 74
          RKIDFRRN KDIY
Sbjct: 61 RKIDFRRNAKDIY 73

[Close]
BLAST of CsGy2G006240 vs. Swiss-Prot
Match: sp|Q09MB2|RK2_CITSI (50S ribosomal protein L2, chloroplastic OS=Citrus sinensis OX=2711 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.8e-36
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 RKIDFRRNEKDIY 74
          RKIDFRRNEKDIY
Sbjct: 61 RKIDFRRNEKDIY 73

[Close]
BLAST of CsGy2G006240 vs. Swiss-Prot
Match: sp|Q4VZK5|RK2_CUCSA (50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.8e-36
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 RKIDFRRNEKDIY 74
          RKIDFRRNEKDIY
Sbjct: 61 RKIDFRRNEKDIY 73

[Close]
BLAST of CsGy2G006240 vs. Swiss-Prot
Match: sp|Q0ZIX7|RK2_VITVI (50S ribosomal protein L2, chloroplastic OS=Vitis vinifera OX=29760 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.5e-35
Identity = 72/73 (98.63%), Postives = 72/73 (98.63%), Query Frame = 0 

Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRN AVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNRAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 RKIDFRRNEKDIY 74
          RKIDFRRNEKDIY
Sbjct: 61 RKIDFRRNEKDIY 73

[Close]
BLAST of CsGy2G006240 vs. Swiss-Prot
Match: sp|Q332R5|RK2_LACSA (50S ribosomal protein L2, chloroplastic OS=Lactuca sativa OX=4236 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.0e-35
Identity = 71/73 (97.26%), Postives = 72/73 (98.63%), Query Frame = 0 

Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDS+VKSNPRNNLIYGQH CGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSKVKSNPRNNLIYGQHHCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 RKIDFRRNEKDIY 74
          RKIDFRRNEKDIY
Sbjct: 61 RKIDFRRNEKDIY 73

[Close]
BLAST of CsGy2G006240 vs. Swiss-Prot
Match: sp|A9L9D7|RK2_LEMMI (50S ribosomal protein L2, chloroplastic OS=Lemna minor OX=4472 GN=rpl2 PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.0e-35
Identity = 71/73 (97.26%), Postives = 72/73 (98.63%), Query Frame = 0 

Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVD +VKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDRKVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 RKIDFRRNEKDIY 74
          RKIDFRRNEKDIY
Sbjct: 61 RKIDFRRNEKDIY 73

[Close]
BLAST of CsGy2G006240 vs. TrEMBL
Match: tr|A0A0M5JBQ9|A0A0M5JBQ9_9MAGN (Ribosomal protein L2 OS=Osyris alba OX=350585 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.2e-35
Identity = 77/99 (77.78%), Postives = 85/99 (85.86%), Query Frame = 0 

Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPR NLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRTNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 RKIDFRRNEKDIY-----EIPKNLFIYSVKLEPGAGFKL 95
          RKIDFRRNEKDIY     ++P    I+++++  G G +L
Sbjct: 61 RKIDFRRNEKDIYGRIVTDMPLGTAIHNIEITLGKGGQL 99

[Close]
BLAST of CsGy2G006240 vs. TrEMBL
Match: tr|A0A0S2XIM2|A0A0S2XIM2_9FABA (50S ribosomal protein L2, chloroplastic OS=Leucaena trichandra OX=190760 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.6e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 RKIDFRRNEKDIY 74
          RKIDFRRNEKDIY
Sbjct: 61 RKIDFRRNEKDIY 73

[Close]
BLAST of CsGy2G006240 vs. TrEMBL
Match: tr|A0A158V0P7|A0A158V0P7_9FABA (50S ribosomal protein L2, chloroplastic OS=Prosopis glandulosa OX=102697 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.6e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 RKIDFRRNEKDIY 74
          RKIDFRRNEKDIY
Sbjct: 61 RKIDFRRNEKDIY 73

[Close]
BLAST of CsGy2G006240 vs. TrEMBL
Match: tr|A0A223FXU4|A0A223FXU4_9ROSA (50S ribosomal protein L2, chloroplastic OS=Malus trilobata OX=106570 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.6e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 RKIDFRRNEKDIY 74
          RKIDFRRNEKDIY
Sbjct: 61 RKIDFRRNEKDIY 73

[Close]
BLAST of CsGy2G006240 vs. TrEMBL
Match: tr|A0A286KTY1|A0A286KTY1_9ROSI (50S ribosomal protein L2, chloroplastic OS=Gynostemma cardiospermum OX=1739658 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.6e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
          MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1  MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61 RKIDFRRNEKDIY 74
          RKIDFRRNEKDIY
Sbjct: 61 RKIDFRRNEKDIY 73

The following BLAST results are available for this feature:
BLAST of CsGy2G006240 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009166935.16.4e-3577.78ribosomal protein L2 (chloroplast) [Osyris alba] >ALC75235.1 ribosomal protein L... [more]
YP_740517.15.4e-34100.00ribosomal protein L2 (chloroplast) [Citrus sinensis] >YP_740541.1 ribosomal prot... [more]
YP_009107017.15.4e-34100.00ribosomal protein L2 (chloroplast) [Sapindus mukorossi] >YP_009262270.1 ribosoma... [more]
ADM92727.15.4e-34100.00ribosomal protein L2, partial (chloroplast) [Davidia involucrata][more]
AEK71414.15.4e-34100.00ribosomal protein L2 (plastid) [Schinus terebinthifolia][more]
BLAST of CsGy2G006240 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00830.11.7e-3494.52ribosomal protein L2[more]
ATCG01310.11.7e-3494.52ribosomal protein L2[more]
BLAST of CsGy2G006240 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q09MB2|RK2_CITSI1.8e-36100.0050S ribosomal protein L2, chloroplastic OS=Citrus sinensis OX=2711 GN=rpl2-A PE=... [more]
sp|Q4VZK5|RK2_CUCSA1.8e-36100.0050S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=... [more]
sp|Q0ZIX7|RK2_VITVI1.5e-3598.6350S ribosomal protein L2, chloroplastic OS=Vitis vinifera OX=29760 GN=rpl2-A PE=... [more]
sp|Q332R5|RK2_LACSA2.0e-3597.2650S ribosomal protein L2, chloroplastic OS=Lactuca sativa OX=4236 GN=rpl2-A PE=3... [more]
sp|A9L9D7|RK2_LEMMI2.0e-3597.2650S ribosomal protein L2, chloroplastic OS=Lemna minor OX=4472 GN=rpl2 PE=2 SV=1[more]
BLAST of CsGy2G006240 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0M5JBQ9|A0A0M5JBQ9_9MAGN4.2e-3577.78Ribosomal protein L2 OS=Osyris alba OX=350585 PE=4 SV=1[more]
tr|A0A0S2XIM2|A0A0S2XIM2_9FABA3.6e-34100.0050S ribosomal protein L2, chloroplastic OS=Leucaena trichandra OX=190760 GN=rpl2... [more]
tr|A0A158V0P7|A0A158V0P7_9FABA3.6e-34100.0050S ribosomal protein L2, chloroplastic OS=Prosopis glandulosa OX=102697 GN=rpl2... [more]
tr|A0A223FXU4|A0A223FXU4_9ROSA3.6e-34100.0050S ribosomal protein L2, chloroplastic OS=Malus trilobata OX=106570 GN=rpl2 PE=... [more]
tr|A0A286KTY1|A0A286KTY1_9ROSI3.6e-34100.0050S ribosomal protein L2, chloroplastic OS=Gynostemma cardiospermum OX=1739658 G... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR002171Ribosomal_L2
IPR022666Rbsml_prot_L2_RNA-bd_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0009507 chloroplast
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0016740 transferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G006240.1CsGy2G006240.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:2.40.50.140coord: 25..89
e-value: 2.8E-17
score: 64.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
NoneNo IPR availablePANTHERPTHR13691:SF539S RIBOSOMAL PROTEIN L2, MITOCHONDRIALcoord: 3..73
IPR022666Ribosomal Proteins L2, RNA binding domainPFAMPF00181Ribosomal_L2coord: 40..72
e-value: 3.3E-9
score: 36.5
IPR002171Ribosomal protein L2PANTHERPTHR13691RIBOSOMAL PROTEIN L2coord: 3..73
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILYSSF50249Nucleic acid-binding proteinscoord: 2..75

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy2G006240Cucumber (Gy14) v2cgybcgybB009
CsGy2G006240Cucurbita maxima (Rimu)cgybcmaB156
CsGy2G006240Cucurbita maxima (Rimu)cgybcmaB162
CsGy2G006240Cucurbita maxima (Rimu)cgybcmaB166
CsGy2G006240Cucurbita maxima (Rimu)cgybcmaB169
CsGy2G006240Cucurbita maxima (Rimu)cgybcmaB252
CsGy2G006240Cucurbita moschata (Rifu)cgybcmoB158
CsGy2G006240Cucurbita moschata (Rifu)cgybcmoB148
CsGy2G006240Cucurbita moschata (Rifu)cgybcmoB154
CsGy2G006240Cucurbita moschata (Rifu)cgybcmoB161
CsGy2G006240Cucurbita moschata (Rifu)cgybcmoB240
CsGy2G006240Cucurbita pepo (Zucchini)cgybcpeB164
CsGy2G006240Cucurbita pepo (Zucchini)cgybcpeB170
CsGy2G006240Cucurbita pepo (Zucchini)cgybcpeB207
CsGy2G006240Cucurbita pepo (Zucchini)cgybcpeB236
CsGy2G006240Cucurbita pepo (Zucchini)cgybcpeB261
CsGy2G006240Cucumber (Chinese Long) v2cgybcuB050
CsGy2G006240Cucumber (Chinese Long) v2cgybcuB056
CsGy2G006240Bottle gourd (USVL1VR-Ls)cgyblsiB089
CsGy2G006240Bottle gourd (USVL1VR-Ls)cgyblsiB121
CsGy2G006240Melon (DHL92) v3.5.1cgybmeB093
CsGy2G006240Melon (DHL92) v3.5.1cgybmeB120
CsGy2G006240Melon (DHL92) v3.6.1cgybmedB090
CsGy2G006240Melon (DHL92) v3.6.1cgybmedB118
CsGy2G006240Watermelon (Charleston Gray)cgybwcgB102
CsGy2G006240Watermelon (Charleston Gray)cgybwcgB139
CsGy2G006240Watermelon (97103) v1cgybwmB155
CsGy2G006240Watermelon (97103) v1cgybwmB160
CsGy2G006240Wild cucumber (PI 183967)cgybcpiB049
CsGy2G006240Wild cucumber (PI 183967)cgybcpiB056
CsGy2G006240Silver-seed gourdcarcgybB0061
CsGy2G006240Silver-seed gourdcarcgybB0597
CsGy2G006240Silver-seed gourdcarcgybB0782
CsGy2G006240Silver-seed gourdcarcgybB0982
CsGy2G006240Cucumber (Chinese Long) v3cgybcucB056
CsGy2G006240Cucumber (Chinese Long) v3cgybcucB064
CsGy2G006240Watermelon (97103) v2cgybwmbB104
CsGy2G006240Watermelon (97103) v2cgybwmbB137
CsGy2G006240Wax gourdcgybwgoB132
CsGy2G006240Wax gourdcgybwgoB206