CsGy2G002660 (gene) Cucumber (Gy14) v2

Overview
NameCsGy2G002660
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr2 : 1761107 .. 1761522 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGGGAATGAAGGGCTCCGAGACGTCCTACGTGGAAGAGAGGGATGGAGCGTCTCGGTTGCCGACAAGGAGTACATGGATCCACGTGGGATCACGAGGACCGTGGGGACCACATGGAAGCGCACGTGTCAACCACCGACGTCCCATCCAGTTGACCGTAGATTGCGGGATCTTTGTACGGACTCTTTTTTTCACCTTTTCCTTTTCTTCCCTTTTTATTATCTTTCTTTTCCCTCTCTTCTGTGTCCCCCCACCTCTTGCTCTTCCCCTCCATTTTCTTTCTTCTCTTTTATTTTATATCATTTTCTCTTCAACCTCACTTGAATTCAGTTCTTCTTTCCAAAATATTTCAAATTTGGTGTCTTACAGATGCTCCTCCTGCTTCTCAAAACGGGAGCACCATACATCTATAA

mRNA sequence

ATGGGAGGGAATGAAGGGCTCCGAGACGTCCTACGTGGAAGAGAGGGATGGAGCGTCTCGGTTGCCGACAAGGAGTACATGGATCCACGTGGGATCACGAGGACCGTGGGGACCACATGGAAGCGCACGTGTCAACCACCGACGTCCCATCCAGTTGACCGTAGATTGCGGGATCTTTATGCTCCTCCTGCTTCTCAAAACGGGAGCACCATACATCTATAA

Coding sequence (CDS)

ATGGGAGGGAATGAAGGGCTCCGAGACGTCCTACGTGGAAGAGAGGGATGGAGCGTCTCGGTTGCCGACAAGGAGTACATGGATCCACGTGGGATCACGAGGACCGTGGGGACCACATGGAAGCGCACGTGTCAACCACCGACGTCCCATCCAGTTGACCGTAGATTGCGGGATCTTTATGCTCCTCCTGCTTCTCAAAACGGGAGCACCATACATCTATAA

Protein sequence

MGGNEGLRDVLRGREGWSVSVADKEYMDPRGITRTVGTTWKRTCQPPTSHPVDRRLRDLYAPPASQNGSTIHL
Homology
[Close]
BLAST of CsGy2G002660 vs. NCBI nr
Match: KGN60767.1 (hypothetical protein Csa_2G009540 [Cucumis sativus])

HSP 1 Score: 157.9 bits (398), Expect = 1.3e-35
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MGGNEGLRDVLRGREGWSVSVADKEYMDPRGITRTVGTTWKRTCQPPTSHPVDRRLRDLY 60
          MGGNEGLRDVLRGREGWSVSVADKEYMDPRGITRTVGTTWKRTCQPPTSHPVDRRLRDLY
Sbjct: 1  MGGNEGLRDVLRGREGWSVSVADKEYMDPRGITRTVGTTWKRTCQPPTSHPVDRRLRDLY 60

Query: 61 APPASQNGSTIHL 74
          APPASQNGSTIHL
Sbjct: 61 APPASQNGSTIHL 73

[Close]
BLAST of CsGy2G002660 vs. TrEMBL
Match: tr|A0A0A0LJ66|A0A0A0LJ66_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009540 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 8.6e-36
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MGGNEGLRDVLRGREGWSVSVADKEYMDPRGITRTVGTTWKRTCQPPTSHPVDRRLRDLY 60
          MGGNEGLRDVLRGREGWSVSVADKEYMDPRGITRTVGTTWKRTCQPPTSHPVDRRLRDLY
Sbjct: 1  MGGNEGLRDVLRGREGWSVSVADKEYMDPRGITRTVGTTWKRTCQPPTSHPVDRRLRDLY 60

Query: 61 APPASQNGSTIHL 74
          APPASQNGSTIHL
Sbjct: 61 APPASQNGSTIHL 73

The following BLAST results are available for this feature:
BLAST of CsGy2G002660 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60767.11.3e-35100.00hypothetical protein Csa_2G009540 [Cucumis sativus][more]
BLAST of CsGy2G002660 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy2G002660 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy2G002660 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LJ66|A0A0A0LJ66_CUCSA8.6e-36100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009540 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G002660.1CsGy2G002660.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..73