CsGy2G002640 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCAGCCTCAGCAGCTTCCGCAGTCGCCAAACCTCCCTCCACTTCTCTGCCTCCTCGCACTTTCAACTACACCACCTCTCATTCTTCGCTCTCCTTTCGCCTACCCAACAAGCCCAAACTCCGAATCTTCACAAGGGTATGCGCCAATTCATCTTCTTCTTCTTTTTTTCTTCCACTTTTAACTAGATTCTTTCTATCTTATTTCTCCCAATTGTTGTCATTTTACGTGATGCGTTTCTGATTTACGATTCTCCTGCAATTTTTTCTTTTTCTGGGTTGGTTTTGAATTTCTCTGCGTGCTAATTGGTTTTGTGATTTGGAAAGAATCTGGAAGAGTGTGTTTGGAGGGTTCTTTTGAATGGAATTCTTGGACTGTTTTTGCTGTTATGTTGAAGTTCGAAAGCGATTTTAAAGAGTGAAAGAGACGTAGATTTGGTGTAAGTCGGGTACAGGTAGCATATAATTCAGGGGGCCATGTTTCTGGAAACGTATACAAAACAAACTCCTCCAACTTTTGTAATGGCATGTAGTTTGAGAGAGAAGCAAGGATATCGTCAGAAGCTCCCAAATGAATAAAGTCTTTAAAAGGGTAGTTATGTATGGAAAGGGAAAGTGTCCTTTTTGGTGGTTGCTATAGTTTGTAACTAGTGATGTAAGCATATATCACAGATATGTTTTTAAGTAGTTTTCGGAGTATTCTTTTTCACAAATGGTCATGGTTCAGGTTCAGTGAAGTCTATTTCATCTGTCTATTGTCTATCAGATTCAAAATCCATCTGTTATAGCATTTTAGGTGGAACAACTAATGAACTCTAACTTAATAACTATTAAATCTTTTGGTGATCTCAATACTCATTACTCAATTTACTTGAGATCCATTGTTATTTATTTGGAGTTTTGTCAATGCTAATGATTGCATTGATCTATACCACTTCAGCTGAAAATCTATTTTCCATGCCATGCTGTTACCCTCTCATGATTAGAGCATGTGATATACGTTAGCATTATGTTGCAGGGGGTGCAGCCTGTTCGTAAGCATTCAACTCTCATTCGAGCACAATTGAACGAGGTATGTATGCTTACTTCAAATTCTAATTGTAGAAGGATTTTATTTTGTTGAAGTATTCACTCCTTCCTAACGTCCTGTCCTTGAAGTTGTCTGTTTCATTGAAGGATCCCGTTGATGTACCTACTGTTGCAAAGATTACATCTGAATCTGATGATTTAGCATCAGATGGAAGTGCTAAGCCATCGAGTGATCAATCTTCTAAAATTTTGGCAACGGAAGAGTCCATCTCTGAGTTCATTACTCAAGTTTCAAGCCTTATCAAGTGAGCTAGCTCAATCTCTGAACTTTTTCTCTAAAGTAACCTACATATGGATGTGGTTATAACATGTTCCTTTACCTGCTCCCAGACTAGTTGATTCCAGAGATATTGTAGAGTTGCAATTGAAACAGCTCGACTGTGAAGTGGTGATTCGGAAAAAGGAGGCCTTACCACAGCCACCACCTCCTGCTGCCATTCCAATGATGTATGCACCCCCACCGTCAGTAGCACAGTCAGCTCCTCCCCCTATGCCTGCTGCACTACCAGCGCCTGCTTCTGCTTCAAGTCCTCCATCTTCACCTCCGCCTGCCAAGTCAGCTGCATCCTCCCTTCCACCTCTTAAATGTCCTATGGCTGGCACATTCTACCGTTGTCCAGGACCTGGACAACCACCATTTGTGAAGGTAAATTTTATGGCCAATGCTAAATAGTATTTCATAAATAAATTTATTTGAATGGTTCTGCTGCAACATCTATTTTGATGGTAAATCTGCTTTTGGGAATATTTGTGGAATTCTTCCCACAGGTTGGCGATCGAGTTAAGAAGGGGCAAGTTTTATGCATCATTGAGGCCATGAAATTAATGAACGAAATAGAAGTAAGATTTCCCATCTCCATCCACTTAAATCTTATGAATATGAGAAGTTATTTTGAATTTTACAGTTGATAGTCAATCCATATTCTACCACTGCTTGCTAACTCACTGTCTTCCTTCAGTTTTATGCCCCGTTCCCTGTTTTCCTTGCTAACAGTATATTCTATACCTACCATTTGGTATTGTCTATTGATGAGGGACTGTACTAGAATCACTATCGGATTCACATAGTTTCCGAATTTTACATTCACTGTTTATAATGGCTTCATTATGGATGAAACAATCACTAAATACAGGAAAGATGGAACAATAATCTACTAATTATGAGTTAACATTCATAACAACAATTTACGGGGAACAAAATTAGATCAGACCATTTTAGTTTGCTTCTTATTCTTCCATATGAACAATTTACCCCACAATATATATGTGAATCAGGGTAAATCTCCTATTACTCCTGCCCAATCCACAACCTATATTTGGTTCTTTGATAATTTCTAGTGATACAATTTATTGATCAACGAACTTTCATACAACAAATTATAAACAACCACAAAGGGAACTTACACAAAGGTGTTTGCACTGGCATTAATTACAAGAGGGGAAAAAAGGAGAGAATGAAGAGAGACATCAAGAAGAAACCTTAAAACTATAGGACACATTTGGACATATGTAACTCGATCCTATTAAAGAAAGATTGTAGCATCGAGATGAAACCCTGAAGTGAATAGCCTCCCGCACATGGTCCCAATCCTCTCTATTTTGAAAAAGTTGACAGTTCCTTTCCTTCCTAATATCCCAAAATGTAGCATTAATAGCTGGAATCCAAATAAATCTTAGCTTTATGATTCATATCCAAACCATAAAGCTTTTGGTTCAAGGACCTAACACCATCCGTATGGGAGCACCAAGAGACACCAAAAGGGTTAAGTAGATTAGTCCACAATTTTTAGCTAACCTAGAACCGCAAAAATATATCCTCATTCTTAAAGCATAAATAAGCAACAATAGTGGACATGCAAAAAAGTGAGCTTAAAAATACGAAAGAACACGAAGACATATGAAAAGGTGAACCTACAAAAGCTAGAGTTAACCTAATTGAGGAAACGATATCATTGGAGTTTCAATGTAAGACGATACCATGTTAAATCACTACTAAACCCAAAAATTTAAGTGGATGGGTTGTGGTGCATTTTATAGTATGGAAAATTTTAGGAAGTATGTTTACATGAGTTTAGAAGTTCAGTAAAATTGTAAAACATTTTAATTTTAGAAGTTACATTATCGTACGAAGTGTATATTGCAATATATTACATAAAAAGAGGTAATAATCTGCCCACAATGAAGACATACATTCGACCATGGACATCTGTTCGGTCAATTGAACTTGAGAATAATTTTATTGATTCTGATTTTGAATTCCTAGAATGCTGTTATCGAGCCACCCTTAAAGTTAATATAGAGTTGAATAATGTCTCGTTGTCAGCTACTACTCAGAACACTAGTTTGAGTCACAACATATGCTAATGTTTGCTCTTAAATAAACTAATCTTCAGGCTGATCAATCGGGCACCATAGTCGAGGTTATTGCAGAGGATGGGAAGCCTGTTAGTGTTGGCACGGTAAGTCATTCAAACGATTACAGTTAATTGTAATGAATAGCTTAACTCTACATACATTATTTGTTTTCCTGGATTCATGGACTTGTTGTGTCTTCTGGTTTCTTTGCAGCCTTTGTTTGCCATTCAACCTTAG ATGGCTTCAGCCTCAGCAGCTTCCGCAGTCGCCAAACCTCCCTCCACTTCTCTGCCTCCTCGCACTTTCAACTACACCACCTCTCATTCTTCGCTCTCCTTTCGCCTACCCAACAAGCCCAAACTCCGAATCTTCACAAGGGGGGTGCAGCCTGTTCGTAAGCATTCAACTCTCATTCGAGCACAATTGAACGAGTTGTCTGTTTCATTGAAGGATCCCGTTGATGTACCTACTGTTGCAAAGATTACATCTGAATCTGATGATTTAGCATCAGATGGAAGTGCTAAGCCATCGAGTGATCAATCTTCTAAAATTTTGGCAACGGAAGAGTCCATCTCTGAGTTCATTACTCAAGTTTCAAGCCTTATCAAACTAGTTGATTCCAGAGATATTGTAGAGTTGCAATTGAAACAGCTCGACTGTGAAGTGGTGATTCGGAAAAAGGAGGCCTTACCACAGCCACCACCTCCTGCTGCCATTCCAATGATGTATGCACCCCCACCGTCAGTAGCACAGTCAGCTCCTCCCCCTATGCCTGCTGCACTACCAGCGCCTGCTTCTGCTTCAAGTCCTCCATCTTCACCTCCGCCTGCCAAGTCAGCTGCATCCTCCCTTCCACCTCTTAAATGTCCTATGGCTGGCACATTCTACCGTTGTCCAGGACCTGGACAACCACCATTTGTGAAGGTTGGCGATCGAGTTAAGAAGGGGCAAGTTTTATGCATCATTGAGGCCATGAAATTAATGAACGAAATAGAAGCTGATCAATCGGGCACCATAGTCGAGGTTATTGCAGAGGATGGGAAGCCTGTTAGTGTTGGCACGCCTTTGTTTGCCATTCAACCTTAG ATGGCTTCAGCCTCAGCAGCTTCCGCAGTCGCCAAACCTCCCTCCACTTCTCTGCCTCCTCGCACTTTCAACTACACCACCTCTCATTCTTCGCTCTCCTTTCGCCTACCCAACAAGCCCAAACTCCGAATCTTCACAAGGGGGGTGCAGCCTGTTCGTAAGCATTCAACTCTCATTCGAGCACAATTGAACGAGTTGTCTGTTTCATTGAAGGATCCCGTTGATGTACCTACTGTTGCAAAGATTACATCTGAATCTGATGATTTAGCATCAGATGGAAGTGCTAAGCCATCGAGTGATCAATCTTCTAAAATTTTGGCAACGGAAGAGTCCATCTCTGAGTTCATTACTCAAGTTTCAAGCCTTATCAAACTAGTTGATTCCAGAGATATTGTAGAGTTGCAATTGAAACAGCTCGACTGTGAAGTGGTGATTCGGAAAAAGGAGGCCTTACCACAGCCACCACCTCCTGCTGCCATTCCAATGATGTATGCACCCCCACCGTCAGTAGCACAGTCAGCTCCTCCCCCTATGCCTGCTGCACTACCAGCGCCTGCTTCTGCTTCAAGTCCTCCATCTTCACCTCCGCCTGCCAAGTCAGCTGCATCCTCCCTTCCACCTCTTAAATGTCCTATGGCTGGCACATTCTACCGTTGTCCAGGACCTGGACAACCACCATTTGTGAAGGTTGGCGATCGAGTTAAGAAGGGGCAAGTTTTATGCATCATTGAGGCCATGAAATTAATGAACGAAATAGAAGCTGATCAATCGGGCACCATAGTCGAGGTTATTGCAGAGGATGGGAAGCCTGTTAGTGTTGGCACGCCTTTGTTTGCCATTCAACCTTAG MASASAASAVAKPPSTSLPPRTFNYTTSHSSLSFRLPNKPKLRIFTRGVQPVRKHSTLIRAQLNELSVSLKDPVDVPTVAKITSESDDLASDGSAKPSSDQSSKILATEESISEFITQVSSLIKLVDSRDIVELQLKQLDCEVVIRKKEALPQPPPPAAIPMMYAPPPSVAQSAPPPMPAALPAPASASSPPSSPPPAKSAASSLPPLKCPMAGTFYRCPGPGQPPFVKVGDRVKKGQVLCIIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGTPLFAIQP
BLAST of CsGy2G002640 vs. NCBI nr
Match: XP_011648731.1 (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic isoform X1 [Cucumis sativus] >KGN60765.1 hypothetical protein Csa_2G009520 [Cucumis sativus]) HSP 1 Score: 389.4 bits (999), Expect = 1.0e-104 Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0
BLAST of CsGy2G002640 vs. NCBI nr
Match: XP_004139256.1 (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic isoform X2 [Cucumis sativus]) HSP 1 Score: 373.2 bits (957), Expect = 7.6e-100 Identity = 276/282 (97.87%), Postives = 276/282 (97.87%), Query Frame = 0
BLAST of CsGy2G002640 vs. NCBI nr
Match: XP_008456465.1 (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic isoform X1 [Cucumis melo]) HSP 1 Score: 363.6 bits (932), Expect = 6.0e-97 Identity = 263/282 (93.26%), Postives = 272/282 (96.45%), Query Frame = 0
BLAST of CsGy2G002640 vs. NCBI nr
Match: XP_008456473.1 (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 347.4 bits (890), Expect = 4.5e-92 Identity = 257/282 (91.13%), Postives = 266/282 (94.33%), Query Frame = 0
BLAST of CsGy2G002640 vs. NCBI nr
Match: XP_022999091.1 (biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 324.3 bits (830), Expect = 4.0e-85 Identity = 219/282 (77.66%), Postives = 236/282 (83.69%), Query Frame = 0
BLAST of CsGy2G002640 vs. TAIR10
Match: AT5G16390.1 (chloroplastic acetylcoenzyme A carboxylase 1) HSP 1 Score: 176.8 bits (447), Expect = 1.9e-44 Identity = 159/284 (55.99%), Postives = 193/284 (67.96%), Query Frame = 0
BLAST of CsGy2G002640 vs. TAIR10
Match: AT5G15530.1 (biotin carboxyl carrier protein 2) HSP 1 Score: 147.1 bits (370), Expect = 1.6e-35 Identity = 129/171 (75.44%), Postives = 146/171 (85.38%), Query Frame = 0
BLAST of CsGy2G002640 vs. TAIR10
Match: AT1G52670.1 (Single hybrid motif superfamily protein) HSP 1 Score: 53.9 bits (128), Expect = 1.8e-07 Identity = 31/78 (39.74%), Postives = 41/78 (52.56%), Query Frame = 0
BLAST of CsGy2G002640 vs. TAIR10
Match: AT3G15690.2 (Single hybrid motif superfamily protein) HSP 1 Score: 53.5 bits (127), Expect = 2.4e-07 Identity = 30/78 (38.46%), Postives = 43/78 (55.13%), Query Frame = 0
BLAST of CsGy2G002640 vs. Swiss-Prot
Match: sp|Q42533|BCCP1_ARATH (Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BCCP1 PE=1 SV=2) HSP 1 Score: 176.8 bits (447), Expect = 3.4e-43 Identity = 159/284 (55.99%), Postives = 193/284 (67.96%), Query Frame = 0
BLAST of CsGy2G002640 vs. Swiss-Prot
Match: sp|Q42783|BCCP_SOYBN (Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic OS=Glycine max OX=3847 GN=ACCB-1 PE=1 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 9.3e-41 Identity = 171/268 (63.81%), Postives = 196/268 (73.13%), Query Frame = 0
BLAST of CsGy2G002640 vs. Swiss-Prot
Match: sp|Q9LLC1|BCCP2_ARATH (Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BCCP2 PE=1 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 2.9e-34 Identity = 129/171 (75.44%), Postives = 146/171 (85.38%), Query Frame = 0
BLAST of CsGy2G002640 vs. Swiss-Prot
Match: sp|Q06881|BCCP_NOSS1 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=accB PE=1 SV=2) HSP 1 Score: 100.5 bits (249), Expect = 3.1e-20 Identity = 43/72 (59.72%), Postives = 57/72 (79.17%), Query Frame = 0
BLAST of CsGy2G002640 vs. Swiss-Prot
Match: sp|P37799|BCCP_PSEAE (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=accB PE=3 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.1e-16 Identity = 40/73 (54.79%), Postives = 51/73 (69.86%), Query Frame = 0
BLAST of CsGy2G002640 vs. TrEMBL
Match: tr|A0A0A0LFE8|A0A0A0LFE8_CUCSA (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucumis sativus OX=3659 GN=Csa_2G009520 PE=4 SV=1) HSP 1 Score: 389.4 bits (999), Expect = 6.8e-105 Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0
BLAST of CsGy2G002640 vs. TrEMBL
Match: tr|A0A1S3C4K6|A0A1S3C4K6_CUCME (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucumis melo OX=3656 GN=LOC103496408 PE=4 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 4.0e-97 Identity = 263/282 (93.26%), Postives = 272/282 (96.45%), Query Frame = 0
BLAST of CsGy2G002640 vs. TrEMBL
Match: tr|A0A1S3C3B6|A0A1S3C3B6_CUCME (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucumis melo OX=3656 GN=LOC103496408 PE=4 SV=1) HSP 1 Score: 347.4 bits (890), Expect = 2.9e-92 Identity = 257/282 (91.13%), Postives = 266/282 (94.33%), Query Frame = 0
BLAST of CsGy2G002640 vs. TrEMBL
Match: tr|A0A2I4E8B2|A0A2I4E8B2_9ROSI (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Juglans regia OX=51240 GN=LOC108987217 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 8.4e-55 Identity = 155/260 (59.62%), Postives = 184/260 (70.77%), Query Frame = 0
BLAST of CsGy2G002640 vs. TrEMBL
Match: tr|A0A2P4KXD8|A0A2P4KXD8_QUESU (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Quercus suber OX=58331 GN=CFP56_06507 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 2.4e-54 Identity = 188/287 (65.51%), Postives = 213/287 (74.22%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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