Cp4.1LG07g10910 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG07g10910
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Biotin carboxyl carrier acetyl-CoA carboxylase
Location	Cp4.1LG07 : 10127663 .. 10128311 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTATCAAGNCACCCTCTTCCGCCCGCCCCCTGCAACTCCCTCCCATCTTTCCTTCATTCCCCCATTGACGGACCCTCCTANCACTGAACTTTTCCTCTACATATGGCTGTGGTTTAACATGTTTCTCCCTACTTGCAGGCTTGTCGATTCAAGAGACATTGTCGAGTTACAATTGAAACAGCTCGACTGCGAAGTGACGATCCGTAAAAAAGAGGCCTTACCTCAAGCACCACCTCCTGCTGCTGTTCCTATGATGTATGCGTCCCCGCCCTCGCCCTCGCCCTCGGTAGCACCACCAGCTCCTGGTCCTGCTGCACTACCAGCACCTGCTTCTCCAGTTTCAAGCCTACCATCTTCACCTCCTGCTGCCAAGTCAACCAGTTCGTCTCTTCCACCTCTCAAATGCCCTATGGCGGGCACGTTCTACCGTAGTCCCGGGCCTGGAGAACCACCGTTTGTTAAGGTAAATTTCTTTCGTATAGTAAATGGTATTTCGTAAATCTTTCGTTGGAGCTTTTTTTGAGGAGTTCTTCTTATAGGTTGGAGATAAAGTACAGAAGGGACAAATCTTATGCATCATTGAGGCTATGAAATTAATGAACGAAATAGAGGTAAGATTTTCTCTCTTTATACGTTTAGATCTTTGA

mRNA sequence

CCTTATCAAGNCACCCTCTTCCGCCCGCCCCCTGCAACTCCCTCCCATCTTTCCTTCATTCCCCCATTGACGGACCCTCCTANCACTGAACTTTTCCTCTACATATGGCTGTGGTTTAACATGTTTCTCCCTACTTGCAGGCTTGTCGATTCAAGAGACATTGTCGAGTTACAATTGAAACAGCTCGACTGCGAAGTGACGATCCGTAAAAAAGAGGCCTTACCTCAAGCACCACCTCCTGCTGCTGTTCCTATGATGTATGCGTCCCCGCCCTCGCCCTCGCCCTCGGTAGCACCACCAGCTCCTGGTCCTGCTGCACTACCAGCACCTGCTTCTCCAGTTTCAAGCCTACCATCTTCACCTCCTGCTGCCAAGTCAACCAGTTCGTCTCTTCCACCTCTCAAATGCCCTATGGCGGGCACGTTCTACCGTAGTCCCGGGCCTGGAGAACCACCGTTTGTTAAGGTTGGAGATAAAGTACAGAAGGGACAAATCTTATGCATCATTGAGGCTATGAAATTAATGAACGAAATAGAGGTAAGATTTTCTCTCTTTATACGTTTAGATCTTTGA

Coding sequence (CDS)

CCTTATCAAGNCACCCTCTTCCGCCCGCCCCCTGCAACTCCCTCCCATCTTTCCTTCATTCCCCCATTGACGGACCCTCCTANCACTGAACTTTTCCTCTACATATGGCTGTGGTTTAACATGTTTCTCCCTACTTGCAGGCTTGTCGATTCAAGAGACATTGTCGAGTTACAATTGAAACAGCTCGACTGCGAAGTGACGATCCGTAAAAAAGAGGCCTTACCTCAAGCACCACCTCCTGCTGCTGTTCCTATGATGTATGCGTCCCCGCCCTCGCCCTCGCCCTCGGTAGCACCACCAGCTCCTGGTCCTGCTGCACTACCAGCACCTGCTTCTCCAGTTTCAAGCCTACCATCTTCACCTCCTGCTGCCAAGTCAACCAGTTCGTCTCTTCCACCTCTCAAATGCCCTATGGCGGGCACGTTCTACCGTAGTCCCGGGCCTGGAGAACCACCGTTTGTTAAGGTTGGAGATAAAGTACAGAAGGGACAAATCTTATGCATCATTGAGGCTATGAAATTAATGAACGAAATAGAGGTAAGATTTTCTCTCTTTATACGTTTAGATCTTTGA

Protein sequence

PYQXTLFRPPPATPSHLSFIPPLTDPPXTELFLYIWLWFNMFLPTCRLVDSRDIVELQLKQLDCEVTIRKKEALPQAPPPAAVPMMYASPPSPSPSVAPPAPGPAALPAPASPVSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQILCIIEAMKLMNEIEVRFSLFIRLDL

Homology

[Close]

BLAST of Cp4.1LG07g10910 vs. Swiss-Prot
Match: BCCP_SOYBN (Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic OS=Glycine max GN=ACCB-1 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.5e-36
Identity = 93/134 (69.40%), Postives = 105/134 (78.36%), Query Frame = 1


Query: 47  RLVDSRDIVELQLKQLDCEVTIRKKEALPQAPPPAAVPMMYASPPSPSPSVAPPAPGPAA 106
           +LVDSRDIVEL+LKQ D EVTIRKKEA+PQ PPPA  P +  SPP P+    PP P PA+
Sbjct: 104 KLVDSRDIVELKLKQHDVEVTIRKKEAMPQ-PPPAPQPSVVYSPPPPA---LPPPPVPAS 163

Query: 107 LPAPA-SPVSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQI 166
            PAP  +  +  P+S PA KS  SSLPPLK PMAGTFYRSP PGEP FVKVGDKV+KGQ+
Sbjct: 164 TPAPTLARATPTPTSAPAVKSAKSSLPPLKSPMAGTFYRSPAPGEPSFVKVGDKVKKGQV 223

Query: 167 LCIIEAMKLMNEIE 180
           +CIIEAMKLMNEIE
Sbjct: 224 VCIIEAMKLMNEIE 233

[Close]

BLAST of Cp4.1LG07g10910 vs. Swiss-Prot
Match: BCCP1_ARATH (Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic OS=Arabidopsis thaliana GN=BCCP1 PE=1 SV=2)

HSP 1 Score: 152.5 bits (384), Expect = 4.6e-36
Identity = 92/134 (68.66%), Postives = 104/134 (77.61%), Query Frame = 1


Query: 47  RLVDSRDIVELQLKQLDCEVTIRKKEALPQAPPPAAVPMMYA-SPPSPSPSVAPPAPGPA 106
           +LVDSRDIVELQLKQLDCE+ IRKKEALPQ   PA+  MM   + PS +  +APPA   A
Sbjct: 120 KLVDSRDIVELQLKQLDCELVIRKKEALPQPQAPASYVMMQQPNQPSYAQQMAPPAAPAA 179

Query: 107 ALPAPASPVSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQI 166
           A PAP++P S  P SPP      SSLP +K PMAGTFYRSP PGEPPF+KVGDKVQKGQ+
Sbjct: 180 AAPAPSTPASLPPPSPPTP--AKSSLPTVKSPMAGTFYRSPAPGEPPFIKVGDKVQKGQV 239

Query: 167 LCIIEAMKLMNEIE 180
           LCI+EAMKLMNEIE
Sbjct: 240 LCIVEAMKLMNEIE 251

[Close]

BLAST of Cp4.1LG07g10910 vs. Swiss-Prot
Match: BCCP2_ARATH (Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic OS=Arabidopsis thaliana GN=BCCP2 PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.0e-35
Identity = 93/144 (64.58%), Postives = 105/144 (72.92%), Query Frame = 1


Query: 47  RLVDSRDIVELQLKQLDCEVTIRKKEALPQAPPPAAV-----PMM--YASPPSPSPSVAP 106
           +LVDS+DIVEL+LKQLDCE+ IRKKEAL QA PPA V     P+M  ++ PP+  P   P
Sbjct: 98  KLVDSKDIVELELKQLDCEIVIRKKEALQQAVPPAPVYHSMPPVMADFSMPPA-QPVALP 157

Query: 107 PAPGPAALPAPASPVSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDK 166
           P+P P + PA A P S          + SSS PPLK PMAGTFYRSPGPGEPPFVKVGDK
Sbjct: 158 PSPTPTSTPATAKPTS----------APSSSHPPLKSPMAGTFYRSPGPGEPPFVKVGDK 217

Query: 167 VQKGQILCIIEAMKLMNEIEVRFS 184
           VQKGQI+CIIEAMKLMNEIE   S
Sbjct: 218 VQKGQIVCIIEAMKLMNEIEAEKS 230

[Close]

BLAST of Cp4.1LG07g10910 vs. Swiss-Prot
Match: BCCP_NOSS1 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=accB PE=1 SV=2)

HSP 1 Score: 73.9 bits (180), Expect = 2.1e-12
Identity = 60/152 (39.47%), Postives = 79/152 (51.97%), Query Frame = 1


Query: 39  FNMFLPTCRLVDSRDIVELQLKQLDCEVTIRKKEALPQAPPPAAVP----MMYASPPSPS 98
           FN        +   DI E+ LK  D E+T+RK   +  +  P        ++ +  PS  
Sbjct: 5   FNEIRQLLTTIAQTDIAEVTLKSDDFELTVRKAVGVNNSVVPVVTAPLSGVVGSGLPSAI 64

Query: 99  PSVAPPAPGPAALPAP---ASPVSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEP 158
           P VA  AP P+  P     A    +   S P AK     L  +  PM GTFYR+P PGE 
Sbjct: 65  PIVAHAAPSPSPEPGTSRAADHAVTSSGSQPGAKIIDQKLAEVASPMVGTFYRAPAPGEA 124

Query: 159 PFVKVGDKVQKGQILCIIEAMKLMNEIEVRFS 184
            FV+VGD++++GQ +CIIEAMKLMNEIE   S
Sbjct: 125 VFVEVGDRIRQGQTVCIIEAMKLMNEIEADVS 156

[Close]

BLAST of Cp4.1LG07g10910 vs. Swiss-Prot
Match: BCCP_PYRYE (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Pyropia yezoensis GN=accB PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.6e-10
Identity = 31/43 (72.09%), Postives = 35/43 (81.40%), Query Frame = 1


Query: 137 PMAGTFYRSPGPGEPPFVKVGDKVQKGQILCIIEAMKLMNEIE 180
           PM GTFY SP PGE  FV+VGD+V+  Q +CIIEAMKLMNEIE
Sbjct: 87  PMVGTFYHSPAPGEKIFVQVGDEVKFNQTVCIIEAMKLMNEIE 129

[Close]

BLAST of Cp4.1LG07g10910 vs. TrEMBL
Match: A0A0A0LFE8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G009520 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.0e-46
Identity = 109/133 (81.95%), Postives = 117/133 (87.97%), Query Frame = 1


Query: 47  RLVDSRDIVELQLKQLDCEVTIRKKEALPQAPPPAAVPMMYASPPSPSPSVAPPAPGPAA 106
           +LVDSRDIVELQLKQLDCEV IRKKEALPQ PPPAA+PMMYA PPS + S  PP P  AA
Sbjct: 124 KLVDSRDIVELQLKQLDCEVVIRKKEALPQPPPPAAIPMMYAPPPSVAQSAPPPMP--AA 183

Query: 107 LPAPASPVSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQIL 166
           LPAPAS  SS PSSPP AKS +SSLPPLKCPMAGTFYR PGPG+PPFVKVGD+V+KGQ+L
Sbjct: 184 LPAPAS-ASSPPSSPPPAKSAASSLPPLKCPMAGTFYRCPGPGQPPFVKVGDRVKKGQVL 243

Query: 167 CIIEAMKLMNEIE 180
           CIIEAMKLMNEIE
Sbjct: 244 CIIEAMKLMNEIE 253

[Close]

BLAST of Cp4.1LG07g10910 vs. TrEMBL
Match: E6Y6Q7_ARAHY (Biotin carboxyl carrier protein 1-1 OS=Arachis hypogaea GN=BCCP1-1 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.4e-39
Identity = 100/133 (75.19%), Postives = 109/133 (81.95%), Query Frame = 1


Query: 47  RLVDSRDIVELQLKQLDCEVTIRKKEALPQAPPPAAVPMMYASPPSPSPSVAPPAPGPAA 106
           +LVDSRDIVELQLKQ DCEV IRK+EA+PQ  PPA  P MY  PPS +   A PA  PA 
Sbjct: 121 KLVDSRDIVELQLKQHDCEVMIRKREAMPQPQPPAQ-PAMYYPPPSLAAPPAAPASSPAP 180

Query: 107 LPAPASPVSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQIL 166
            P PA+  +S  +SPPAAKST SSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKV+KGQ+L
Sbjct: 181 APTPATRAAS--ASPPAAKSTKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVKKGQVL 240

Query: 167 CIIEAMKLMNEIE 180
           CIIEAMKLMNEIE
Sbjct: 241 CIIEAMKLMNEIE 250

[Close]

BLAST of Cp4.1LG07g10910 vs. TrEMBL
Match: C0LLW0_SUASA (Acetyl-coenzyme A carboxylase (Fragment) OS=Suaeda salsa PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.8e-39
Identity = 99/133 (74.44%), Postives = 108/133 (81.20%), Query Frame = 1


Query: 47  RLVDSRDIVELQLKQLDCEVTIRKKEALPQAPPPAAVPMMYASPPSPSPSVAPPAPGPAA 106
           +LVDSRDIVELQLKQ DCEV IRK+EA+PQ  PPA  P MY  PPS +     PA  PA 
Sbjct: 99  KLVDSRDIVELQLKQHDCEVMIRKREAMPQPQPPAQ-PAMYYPPPSLAAPPVAPASSPAP 158

Query: 107 LPAPASPVSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQIL 166
            P PA+  +S  +SPPAAKST SSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKV+KGQ+L
Sbjct: 159 APTPATRAAS--ASPPAAKSTKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVKKGQVL 218

Query: 167 CIIEAMKLMNEIE 180
           CIIEAMKLMNEIE
Sbjct: 219 CIIEAMKLMNEIE 228

[Close]

BLAST of Cp4.1LG07g10910 vs. TrEMBL
Match: E6Y6Q8_ARAHY (Biotin carboxyl carrier protein 1-2 OS=Arachis hypogaea GN=BCCP1-2 PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.8e-39
Identity = 99/133 (74.44%), Postives = 108/133 (81.20%), Query Frame = 1


Query: 47  RLVDSRDIVELQLKQLDCEVTIRKKEALPQAPPPAAVPMMYASPPSPSPSVAPPAPGPAA 106
           +LVDSRDIVELQLKQ DCEV IRK+EA+PQ  PPA  P MY  PPS +     PA  PA 
Sbjct: 121 KLVDSRDIVELQLKQHDCEVMIRKREAMPQPQPPAQ-PAMYYPPPSLAAPPVAPASSPAP 180

Query: 107 LPAPASPVSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQIL 166
            P PA+  +S  +SPPAAKST SSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKV+KGQ+L
Sbjct: 181 APTPATRAAS--ASPPAAKSTKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVKKGQVL 240

Query: 167 CIIEAMKLMNEIE 180
           CIIEAMKLMNEIE
Sbjct: 241 CIIEAMKLMNEIE 250

[Close]

BLAST of Cp4.1LG07g10910 vs. TrEMBL
Match: L0HTL0_PERAE (Biotin carboxyl carrier protein OS=Persea americana GN=BCCP PE=2 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 3.4e-38
Identity = 112/177 (63.28%), Postives = 124/177 (70.06%), Query Frame = 1


Query: 13  TPSHLSFIPPLTDPPXTELFL-------YIWLWFNMFLPTCRLVDSRDIVELQLKQLDCE 72
           +PS  S  P L D    E  L       YI  + N      +LVDSRDIVELQLKQ +CE
Sbjct: 77  SPSKNSEAPALEDKDANEPSLEAPVSEEYISEFINQVASLVKLVDSRDIVELQLKQHNCE 136

Query: 73  VTIRKKEALPQAPPPAAVPMMYA-SPPSPSPSVAPPAPGPAALPAPASPV--SSLPSSPP 132
           V IRKKEAL Q P PA V MM++ SPP+  PS  PP P PA  PAPASP   +S P++  
Sbjct: 137 VIIRKKEALAQPPGPAPVVMMHSPSPPAAMPSHYPP-PQPATAPAPASPAPSTSAPTALT 196

Query: 133 AAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQILCIIEAMKLMNEIE 180
           AAKS  SSLPPLKCPMAGTFYRS GPGEPPFVKVGDKV+KGQ+LCIIEAMKLMNEIE
Sbjct: 197 AAKSPKSSLPPLKCPMAGTFYRSTGPGEPPFVKVGDKVKKGQVLCIIEAMKLMNEIE 252

[Close]

BLAST of Cp4.1LG07g10910 vs. TAIR10
Match: AT5G16390.1 (AT5G16390.1 chloroplastic acetylcoenzyme A carboxylase 1)

HSP 1 Score: 152.5 bits (384), Expect = 2.6e-37
Identity = 92/134 (68.66%), Postives = 104/134 (77.61%), Query Frame = 1


Query: 47  RLVDSRDIVELQLKQLDCEVTIRKKEALPQAPPPAAVPMMYA-SPPSPSPSVAPPAPGPA 106
           +LVDSRDIVELQLKQLDCE+ IRKKEALPQ   PA+  MM   + PS +  +APPA   A
Sbjct: 120 KLVDSRDIVELQLKQLDCELVIRKKEALPQPQAPASYVMMQQPNQPSYAQQMAPPAAPAA 179

Query: 107 ALPAPASPVSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQI 166
           A PAP++P S  P SPP      SSLP +K PMAGTFYRSP PGEPPF+KVGDKVQKGQ+
Sbjct: 180 AAPAPSTPASLPPPSPPTP--AKSSLPTVKSPMAGTFYRSPAPGEPPFIKVGDKVQKGQV 239

Query: 167 LCIIEAMKLMNEIE 180
           LCI+EAMKLMNEIE
Sbjct: 240 LCIVEAMKLMNEIE 251

[Close]

BLAST of Cp4.1LG07g10910 vs. TAIR10
Match: AT5G15530.1 (AT5G15530.1 biotin carboxyl carrier protein 2)

HSP 1 Score: 149.1 bits (375), Expect = 2.8e-36
Identity = 93/144 (64.58%), Postives = 105/144 (72.92%), Query Frame = 1


Query: 47  RLVDSRDIVELQLKQLDCEVTIRKKEALPQAPPPAAV-----PMM--YASPPSPSPSVAP 106
           +LVDS+DIVEL+LKQLDCE+ IRKKEAL QA PPA V     P+M  ++ PP+  P   P
Sbjct: 98  KLVDSKDIVELELKQLDCEIVIRKKEALQQAVPPAPVYHSMPPVMADFSMPPA-QPVALP 157

Query: 107 PAPGPAALPAPASPVSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDK 166
           P+P P + PA A P S          + SSS PPLK PMAGTFYRSPGPGEPPFVKVGDK
Sbjct: 158 PSPTPTSTPATAKPTS----------APSSSHPPLKSPMAGTFYRSPGPGEPPFVKVGDK 217

Query: 167 VQKGQILCIIEAMKLMNEIEVRFS 184
           VQKGQI+CIIEAMKLMNEIE   S
Sbjct: 218 VQKGQIVCIIEAMKLMNEIEAEKS 230

[Close]

BLAST of Cp4.1LG07g10910 vs. NCBI nr
Match: gi|449442975|ref|XP_004139256.1| (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 193.7 bits (491), Expect = 2.9e-46
Identity = 109/133 (81.95%), Postives = 117/133 (87.97%), Query Frame = 1


Query: 47  RLVDSRDIVELQLKQLDCEVTIRKKEALPQAPPPAAVPMMYASPPSPSPSVAPPAPGPAA 106
           +LVDSRDIVELQLKQLDCEV IRKKEALPQ PPPAA+PMMYA PPS + S  PP P  AA
Sbjct: 118 KLVDSRDIVELQLKQLDCEVVIRKKEALPQPPPPAAIPMMYAPPPSVAQSAPPPMP--AA 177

Query: 107 LPAPASPVSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQIL 166
           LPAPAS  SS PSSPP AKS +SSLPPLKCPMAGTFYR PGPG+PPFVKVGD+V+KGQ+L
Sbjct: 178 LPAPAS-ASSPPSSPPPAKSAASSLPPLKCPMAGTFYRCPGPGQPPFVKVGDRVKKGQVL 237

Query: 167 CIIEAMKLMNEIE 180
           CIIEAMKLMNEIE
Sbjct: 238 CIIEAMKLMNEIE 247

[Close]

BLAST of Cp4.1LG07g10910 vs. NCBI nr
Match: gi|778666379|ref|XP_011648731.1| (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 193.7 bits (491), Expect = 2.9e-46
Identity = 109/133 (81.95%), Postives = 117/133 (87.97%), Query Frame = 1


Query: 47  RLVDSRDIVELQLKQLDCEVTIRKKEALPQAPPPAAVPMMYASPPSPSPSVAPPAPGPAA 106
           +LVDSRDIVELQLKQLDCEV IRKKEALPQ PPPAA+PMMYA PPS + S  PP P  AA
Sbjct: 124 KLVDSRDIVELQLKQLDCEVVIRKKEALPQPPPPAAIPMMYAPPPSVAQSAPPPMP--AA 183

Query: 107 LPAPASPVSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQIL 166
           LPAPAS  SS PSSPP AKS +SSLPPLKCPMAGTFYR PGPG+PPFVKVGD+V+KGQ+L
Sbjct: 184 LPAPAS-ASSPPSSPPPAKSAASSLPPLKCPMAGTFYRCPGPGQPPFVKVGDRVKKGQVL 243

Query: 167 CIIEAMKLMNEIE 180
           CIIEAMKLMNEIE
Sbjct: 244 CIIEAMKLMNEIE 253

[Close]

BLAST of Cp4.1LG07g10910 vs. NCBI nr
Match: gi|659070749|ref|XP_008456465.1| (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 193.4 bits (490), Expect = 3.7e-46
Identity = 111/133 (83.46%), Postives = 115/133 (86.47%), Query Frame = 1


Query: 47  RLVDSRDIVELQLKQLDCEVTIRKKEALPQAPPPAAVPMMYASPPSPSPSVAPPAPGPAA 106
           +LVDSRDIVELQLKQLDCEV IRKKEALPQ PPPA  PMMYA PPS + S  PP P  AA
Sbjct: 128 KLVDSRDIVELQLKQLDCEVVIRKKEALPQPPPPAVGPMMYAPPPSVAQSAPPPMP--AA 187

Query: 107 LPAPASPVSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQIL 166
           LPAPAS  SS PSSPP AKS +SSLP LKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQ+L
Sbjct: 188 LPAPAS-ASSAPSSPPPAKSATSSLPTLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQVL 247

Query: 167 CIIEAMKLMNEIE 180
           CIIEAMKLMNEIE
Sbjct: 248 CIIEAMKLMNEIE 257

[Close]

BLAST of Cp4.1LG07g10910 vs. NCBI nr
Match: gi|659070751|ref|XP_008456473.1| (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 193.4 bits (490), Expect = 3.7e-46
Identity = 111/133 (83.46%), Postives = 115/133 (86.47%), Query Frame = 1


Query: 47  RLVDSRDIVELQLKQLDCEVTIRKKEALPQAPPPAAVPMMYASPPSPSPSVAPPAPGPAA 106
           +LVDSRDIVELQLKQLDCEV IRKKEALPQ PPPA  PMMYA PPS + S  PP P  AA
Sbjct: 122 KLVDSRDIVELQLKQLDCEVVIRKKEALPQPPPPAVGPMMYAPPPSVAQSAPPPMP--AA 181

Query: 107 LPAPASPVSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQIL 166
           LPAPAS  SS PSSPP AKS +SSLP LKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQ+L
Sbjct: 182 LPAPAS-ASSAPSSPPPAKSATSSLPTLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQVL 241

Query: 167 CIIEAMKLMNEIE 180
           CIIEAMKLMNEIE
Sbjct: 242 CIIEAMKLMNEIE 251

[Close]

BLAST of Cp4.1LG07g10910 vs. NCBI nr
Match: gi|1009118243|ref|XP_015875754.1| (PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 171.0 bits (432), Expect = 2.0e-39
Identity = 103/144 (71.53%), Postives = 112/144 (77.78%), Query Frame = 1


Query: 38  WFNMFLPTCRLVDSRDIVELQLKQLDCEVTIRKKEALPQAPPPAAVPMMYASPPSPSPSV 97
           + N      +LVDSRDIVELQLKQLDCEVTIRKKEALPQ P PA V MM++  P  +P+ 
Sbjct: 113 FINQVASLVKLVDSRDIVELQLKQLDCEVTIRKKEALPQPPAPAPVAMMHSPYPPIAPTA 172

Query: 98  AP-PAPGPAALPAPASPVSSLPS-SPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVK 157
           +P PAP PA  PAPA   S  P+ SPPAA S  SSLP LK PMAGTFYRSP PGEPPFVK
Sbjct: 173 SPAPAPAPAPAPAPAPASSPAPAPSPPAASSPKSSLPTLKSPMAGTFYRSPAPGEPPFVK 232

Query: 158 VGDKVQKGQILCIIEAMKLMNEIE 180
           VGDKVQKGQ+LCIIEAMKLMNEIE
Sbjct: 233 VGDKVQKGQVLCIIEAMKLMNEIE 256

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g10910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BCCP_SOYBN	3.5e-36	69.40	Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic OS=Glyc...	[more]
BCCP1_ARATH	4.6e-36	68.66	Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic OS=Ar...	[more]
BCCP2_ARATH	5.0e-35	64.58	Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic OS=Ar...	[more]
BCCP_NOSS1	2.1e-12	39.47	Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Nostoc sp. (strain ...	[more]
BCCP_PYRYE	5.6e-10	72.09	Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Pyropia yezoensis G...	[more]

BLAST of Cp4.1LG07g10910 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFE8_CUCSA	2.0e-46	81.95	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G009520 PE=4 SV=1	[more]
E6Y6Q7_ARAHY	2.4e-39	75.19	Biotin carboxyl carrier protein 1-1 OS=Arachis hypogaea GN=BCCP1-1 PE=2 SV=1	[more]
C0LLW0_SUASA	6.8e-39	74.44	Acetyl-coenzyme A carboxylase (Fragment) OS=Suaeda salsa PE=2 SV=1	[more]
E6Y6Q8_ARAHY	6.8e-39	74.44	Biotin carboxyl carrier protein 1-2 OS=Arachis hypogaea GN=BCCP1-2 PE=2 SV=1	[more]
L0HTL0_PERAE	3.4e-38	63.28	Biotin carboxyl carrier protein OS=Persea americana GN=BCCP PE=2 SV=1	[more]

BLAST of Cp4.1LG07g10910 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16390.1	2.6e-37	68.66	chloroplastic acetylcoenzyme A carboxylase 1	[more]
AT5G15530.1	2.8e-36	64.58	biotin carboxyl carrier protein 2	[more]

BLAST of Cp4.1LG07g10910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442975\|ref\|XP_004139256.1\|	2.9e-46	81.95	PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplas...	[more]
gi\|778666379\|ref\|XP_011648731.1\|	2.9e-46	81.95	PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplas...	[more]
gi\|659070749\|ref\|XP_008456465.1\|	3.7e-46	83.46	PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplas...	[more]
gi\|659070751\|ref\|XP_008456473.1\|	3.7e-46	83.46	PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplas...	[more]
gi\|1009118243\|ref\|XP_015875754.1\|	2.0e-39	71.53	PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloropl...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0009317	acetyl-CoA carboxylase complex

Vocabulary: **Biological Process**
Term	Definition
GO:0006633	fatty acid biosynthetic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0003989	acetyl-CoA carboxylase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR011053	Single_hybrid_motif
IPR001249	AcCoA_biotinCC
IPR000089	Biotin_lipoyl

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0006090	pyruvate metabolic process
cellular_component	GO:0009317	acetyl-CoA carboxylase complex
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0003989	acetyl-CoA carboxylase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g10910.1	Cp4.1LG07g10910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000089	Biotin/lipoyl attachment	PFAM	PF00364	Biotin_lipoyl	coord: 134..181 score: 3.4
IPR001249	Acetyl-CoA biotin carboxyl carrier	PRINTS	PR01071	ACOABIOTINCC	coord: 136..149 score: 3.6E-19coord: 168..181 score: 3.6E-19coord: 153..167 score: 3.6
IPR011053	Single hybrid motif	unknown	SSF51230	Single hybrid motif	coord: 133..183 score: 1.57
None	No IPR available	GENE3D	G3DSA:2.40.50.100		coord: 132..183 score: 1.8
None	No IPR available	PANTHER	PTHR23151	DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED	coord: 47..179 score: 1.4
None	No IPR available	PANTHER	PTHR23151:SF66	BIOTIN CARBOXYL CARRIER PROTEIN OF ACETYL-COA CARBOXYLASE 1, CHLOROPLASTIC	coord: 47..179 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG07g10910	Cucsa.132870	Cucumber (Gy14) v1	cgycpeB0355
Cp4.1LG07g10910	CmaCh12G011510	Cucurbita maxima (Rimu)	cmacpeB206
Cp4.1LG07g10910	CmaCh05G012320	Cucurbita maxima (Rimu)	cmacpeB798
Cp4.1LG07g10910	CmoCh05G012580	Cucurbita moschata (Rifu)	cmocpeB751
Cp4.1LG07g10910	CmoCh12G011710	Cucurbita moschata (Rifu)	cmocpeB178
Cp4.1LG07g10910	Cla013616	Watermelon (97103) v1	cpewmB809
Cp4.1LG07g10910	Csa2G009520	Cucumber (Chinese Long) v2	cpecuB812
Cp4.1LG07g10910	MELO3C004424	Melon (DHL92) v3.5.1	cpemeB778
Cp4.1LG07g10910	ClCG02G017070	Watermelon (Charleston Gray)	cpewcgB736
Cp4.1LG07g10910	CSPI02G02540	Wild cucumber (PI 183967)	cpecpiB813
Cp4.1LG07g10910	Lsi11G004050	Bottle gourd (USVL1VR-Ls)	cpelsiB655
Cp4.1LG07g10910	MELO3C004424.2	Melon (DHL92) v3.6.1	cpemedB914
Cp4.1LG07g10910	CsaV3_2G003700	Cucumber (Chinese Long) v3	cpecucB1006
Cp4.1LG07g10910	Bhi06G001545	Wax gourd	cpewgoB1013
Cp4.1LG07g10910	CsGy2G002640	Cucumber (Gy14) v2	cgybcpeB262
Cp4.1LG07g10910	Carg23008	Silver-seed gourd	carcpeB1497
Cp4.1LG07g10910	Carg17442	Silver-seed gourd	carcpeB0362

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG07g10910	Cp4.1LG11g10210	Cucurbita pepo (Zucchini)	cpecpeB147
Cp4.1LG07g10910	Cp4.1LG07g09660	Cucurbita pepo (Zucchini)	cpecpeB514

The following block(s) are covering this gene:

None