CsGy2G002580 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGACTCACCAACTCTCTCCCGGACCTCCATACCCATCGCCGTAACCCTCCGCAGGAGACCGACGCCTCTCAACTCCACCACCACCACCACCAACTTCAAACCTCTCTCTTTCATCCTTCTACCTTCTCCTCCGACGATTTCCTCGACCAAATCCTCTCCACTGTCCCCTCTCCCTGGGAACTTCCCCCCGGTCTCCCTTCCCAACCATTGCCGCCATCTAATCCTGACAATGTTGAGTTTCACGTCGGCGATACAACTCCGGCGGCTAAAATGGCCATGTCCTTGCTTCAACAGCAGTTACTCATGTCGAGAGGAATCGTCCCTGCCTCCGCTGGCGATGATTGCGGTCTTCTTCCAATGCCTGGTAACAACGTCGTTGAAGTAGACGGCTCTTCTTCTTCGTCTTTCAAATGCCCTAATCCGGTACTCATAATTCAAACTGCTTATACGTTTCAATTCGAAAATTAGGTTACAAATTGGTAACGTTTGTCGATTCTATTCCTGAGATTTAATTCCGTAAATCCTGCAGACTGATCATGGTTCTGTCGTTCCTTCTCTTTTCAACGAATTCGCCGGGTTTCTGAACTCGACCGGTCCCGGCAGCCAGAATCAGAATCAATCTCAGGCAACAAATTAGTTCGATTCCATCGTTCAGTTGAAACAATAACTTCACCAAATTTTTAAAAACTTCAATTCACAAATCTGCAGGGGAACTCAAACTCTCAGATACCGAACTTCGGAGGTCCGGTATCAGCCAGTACACCACCTCCGGCTGGGCCTAGCTCCTGCGGCGGTGCTGCAGCAGCAGCAGCACCGGGTCAGCCCCGGCAGCGAGTCAGAGCTCGGAGAGGACAAGCCACAGATCCTCATAGTATAGCCGAAAGAGTAATTAATTAACCCTAATTACAAACCGCTAATTCATTAATTACAAAATCCATTTATAATTTTTGTAATGTTGAATTTTTAATATATATTTTTGTGACAGTTACGGAGAGAGCGAATTGCGGAGAGAATGAAAGCTCTACAAGAACTTGTTCCCAACGCTAACAAGGTCAGTTTTGTCTTTTCCATTTTATTAAGGACTTTTCCCGTAATTTGGATTGATGTCATCTCTTGATTACACGTGTCCACAATACGTTATGCCTTTTCTTCATCTCGCGGTTCCGCTTTTGCCACGTCTACTTAGCATTAGGTATTTCTTTTTGAATTCTTTCCATCTTCTTTTCTTGGCCGGACAATGTACTCTTAGTAGCCGGGATTTGCTGCCCTAAATTTTATATATTCGTCAGTTGAATTTTAAGATAAACTATTATAATGGATCCATTTTTTAAAATTAGCTTAAATTGTGCGTCTAATATATATATATATATATATATCATTTATATATAATAAATAGCTATTTTAGCCTTTGAAGTACAGGTTTTGGAAATATATACTTTGTATAAATCAAAGTTAAAAGTATATGTGAAATGAAATGTGTAGGTTGATTTATCATATTATCAATTATGAACAATAGCTCCAAATAATAATTGTAGAACACATTCTAATACTTCAATTTCTTTAAAATATAAAATATGTCAAGCATGTTTCTCTTTATGGAAATAATAATCATGTACACCATAAGAGTTTTTAAATAGCATACAAGCTTCTAACACCAACCCCTTTCTTTAATAATTTGATTTTTTTTTTTTTTTCTTTTTGGTTCTTTCAATTCTTGTTTGCACTTGTGCTCAAGAGTATGGAGTGGAGATTGATATTGGTTACCATCCTATGATGGTTGAACTAAAAAAGATAATATAAATAGTTCCTAGATGGGAGTGGAAATTTTGAATCTTTGATTTGTGGAACGAGTTGAGCTAATGATCTCATAATTAAGATGGGTCAACTTAAACTTATATATTATGTCTTTTTTGGGAATGACAGACAGACAAGGCTTCTATGCTGGATGAGATCATAGACTATGTAAAGTTCCTCCAGCTTCAAGTCAAAGTAAATGATCTCTCTAATTTTCTATTCTCTGTCTCTCACAATAATTCCAACGTAAAAACATGATAAATTAAATTAAAGAATTTGGATTGGGATATGAAATTTATTTAATGTATACATATATTAAGTGGGTTTTGCTTTTTGTTATTGTTGGGTTTGTGGTCTGCTGCAGGTTCTGAGTGTCAGCAGGTTGGGCGGTGCCACTGCTGCCATGCCTTCTCGTCTACCCGATCTTTCCACTGAGGTACCCTAA ATGAGACTCACCAACTCTCTCCCGGACCTCCATACCCATCGCCGTAACCCTCCGCAGGAGACCGACGCCTCTCAACTCCACCACCACCACCACCAACTTCAAACCTCTCTCTTTCATCCTTCTACCTTCTCCTCCGACGATTTCCTCGACCAAATCCTCTCCACTGTCCCCTCTCCCTGGGAACTTCCCCCCGGTCTCCCTTCCCAACCATTGCCGCCATCTAATCCTGACAATGTTGAGTTTCACGTCGGCGATACAACTCCGGCGGCTAAAATGGCCATGTCCTTGCTTCAACAGCAGTTACTCATGTCGAGAGGAATCGTCCCTGCCTCCGCTGGCGATGATTGCGGTCTTCTTCCAATGCCTGGTAACAACGTCGTTGAAGTAGACGGCTCTTCTTCTTCGTCTTTCAAATGCCCTAATCCGGGGAACTCAAACTCTCAGATACCGAACTTCGGAGGTCCGGTATCAGCCAGTACACCACCTCCGGCTGGGCCTAGCTCCTGCGGCGGTGCTGCAGCAGCAGCAGCACCGGGTCAGCCCCGGCAGCGAGTCAGAGCTCGGAGAGGACAAGCCACAGATCCTCATAGTATAGCCGAAAGATTACGGAGAGAGCGAATTGCGGAGAGAATGAAAGCTCTACAAGAACTTGTTCCCAACGCTAACAAGACAGACAAGGCTTCTATGCTGGATGAGATCATAGACTATGTAAAGTTCCTCCAGCTTCAAGTCAAAGTAAATGATCTCTCTAATTTTCTATTCTCTGTCTCTCACAATAATTCCAACGTTCTGAGTGTCAGCAGGTTGGGCGGTGCCACTGCTGCCATGCCTTCTCGTCTACCCGATCTTTCCACTGAGGTACCCTAA ATGAGACTCACCAACTCTCTCCCGGACCTCCATACCCATCGCCGTAACCCTCCGCAGGAGACCGACGCCTCTCAACTCCACCACCACCACCACCAACTTCAAACCTCTCTCTTTCATCCTTCTACCTTCTCCTCCGACGATTTCCTCGACCAAATCCTCTCCACTGTCCCCTCTCCCTGGGAACTTCCCCCCGGTCTCCCTTCCCAACCATTGCCGCCATCTAATCCTGACAATGTTGAGTTTCACGTCGGCGATACAACTCCGGCGGCTAAAATGGCCATGTCCTTGCTTCAACAGCAGTTACTCATGTCGAGAGGAATCGTCCCTGCCTCCGCTGGCGATGATTGCGGTCTTCTTCCAATGCCTGGTAACAACGTCGTTGAAGTAGACGGCTCTTCTTCTTCGTCTTTCAAATGCCCTAATCCGGGGAACTCAAACTCTCAGATACCGAACTTCGGAGGTCCGGTATCAGCCAGTACACCACCTCCGGCTGGGCCTAGCTCCTGCGGCGGTGCTGCAGCAGCAGCAGCACCGGGTCAGCCCCGGCAGCGAGTCAGAGCTCGGAGAGGACAAGCCACAGATCCTCATAGTATAGCCGAAAGATTACGGAGAGAGCGAATTGCGGAGAGAATGAAAGCTCTACAAGAACTTGTTCCCAACGCTAACAAGACAGACAAGGCTTCTATGCTGGATGAGATCATAGACTATGTAAAGTTCCTCCAGCTTCAAGTCAAAGTAAATGATCTCTCTAATTTTCTATTCTCTGTCTCTCACAATAATTCCAACGTTCTGAGTGTCAGCAGGTTGGGCGGTGCCACTGCTGCCATGCCTTCTCGTCTACCCGATCTTTCCACTGAGGTACCCTAA MRLTNSLPDLHTHRRNPPQETDASQLHHHHHQLQTSLFHPSTFSSDDFLDQILSTVPSPWELPPGLPSQPLPPSNPDNVEFHVGDTTPAAKMAMSLLQQQLLMSRGIVPASAGDDCGLLPMPGNNVVEVDGSSSSSFKCPNPGNSNSQIPNFGGPVSASTPPPAGPSSCGGAAAAAAPGQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVNDLSNFLFSVSHNNSNVLSVSRLGGATAAMPSRLPDLSTEVP
BLAST of CsGy2G002580 vs. NCBI nr
Match: XP_004139396.1 (PREDICTED: transcription factor bHLH66-like [Cucumis sativus] >KGN60760.1 hypothetical protein Csa_2G009480 [Cucumis sativus]) HSP 1 Score: 413.3 bits (1061), Expect = 6.7e-112 Identity = 265/318 (83.33%), Postives = 266/318 (83.65%), Query Frame = 0
BLAST of CsGy2G002580 vs. NCBI nr
Match: XP_008456521.1 (PREDICTED: transcription factor bHLH66-like [Cucumis melo]) HSP 1 Score: 311.2 bits (796), Expect = 3.6e-81 Identity = 227/324 (70.06%), Postives = 236/324 (72.84%), Query Frame = 0
BLAST of CsGy2G002580 vs. NCBI nr
Match: XP_023545593.1 (transcription factor bHLH66-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 282.0 bits (720), Expect = 2.3e-72 Identity = 202/322 (62.73%), Postives = 216/322 (67.08%), Query Frame = 0
BLAST of CsGy2G002580 vs. NCBI nr
Match: XP_022946667.1 (transcription factor bHLH69-like [Cucurbita moschata]) HSP 1 Score: 280.4 bits (716), Expect = 6.8e-72 Identity = 201/322 (62.42%), Postives = 215/322 (66.77%), Query Frame = 0
BLAST of CsGy2G002580 vs. NCBI nr
Match: XP_022999424.1 (transcription factor bHLH69-like [Cucurbita maxima]) HSP 1 Score: 276.9 bits (707), Expect = 7.5e-71 Identity = 201/322 (62.42%), Postives = 213/322 (66.15%), Query Frame = 0
BLAST of CsGy2G002580 vs. TAIR10
Match: AT5G58010.1 (LJRHL1-like 3) HSP 1 Score: 120.9 bits (302), Expect = 1.3e-27 Identity = 73/105 (69.52%), Postives = 79/105 (75.24%), Query Frame = 0
BLAST of CsGy2G002580 vs. TAIR10
Match: AT2G24260.1 (LJRHL1-like 1) HSP 1 Score: 119.0 bits (297), Expect = 4.8e-27 Identity = 68/97 (70.10%), Postives = 77/97 (79.38%), Query Frame = 0
BLAST of CsGy2G002580 vs. TAIR10
Match: AT1G03040.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 115.2 bits (287), Expect = 6.9e-26 Identity = 68/107 (63.55%), Postives = 78/107 (72.90%), Query Frame = 0
BLAST of CsGy2G002580 vs. TAIR10
Match: AT4G02590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 115.2 bits (287), Expect = 6.9e-26 Identity = 68/107 (63.55%), Postives = 78/107 (72.90%), Query Frame = 0
BLAST of CsGy2G002580 vs. TAIR10
Match: AT4G30980.1 (LJRHL1-like 2) HSP 1 Score: 113.6 bits (283), Expect = 2.0e-25 Identity = 65/87 (74.71%), Postives = 68/87 (78.16%), Query Frame = 0
BLAST of CsGy2G002580 vs. Swiss-Prot
Match: sp|Q9LSQ3|BH082_ARATH (Transcription factor bHLH82 OS=Arabidopsis thaliana OX=3702 GN=BHLH82 PE=2 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.3e-26 Identity = 73/105 (69.52%), Postives = 79/105 (75.24%), Query Frame = 0
BLAST of CsGy2G002580 vs. Swiss-Prot
Match: sp|Q9ZUG9|BH066_ARATH (Transcription factor bHLH66 OS=Arabidopsis thaliana OX=3702 GN=BHLH66 PE=1 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 8.6e-26 Identity = 68/97 (70.10%), Postives = 77/97 (79.38%), Query Frame = 0
BLAST of CsGy2G002580 vs. Swiss-Prot
Match: sp|Q93Y00|BH007_ARATH (Transcription factor bHLH7 OS=Arabidopsis thaliana OX=3702 GN=BHLH7 PE=1 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.2e-24 Identity = 68/107 (63.55%), Postives = 78/107 (72.90%), Query Frame = 0
BLAST of CsGy2G002580 vs. Swiss-Prot
Match: sp|O22768|UNE12_ARATH (Transcription factor UNE12 OS=Arabidopsis thaliana OX=3702 GN=UNE12 PE=2 SV=2) HSP 1 Score: 115.2 bits (287), Expect = 1.2e-24 Identity = 68/107 (63.55%), Postives = 78/107 (72.90%), Query Frame = 0
BLAST of CsGy2G002580 vs. Swiss-Prot
Match: sp|Q8S3D5|BH069_ARATH (Transcription factor bHLH69 OS=Arabidopsis thaliana OX=3702 GN=BHLH69 PE=2 SV=2) HSP 1 Score: 113.6 bits (283), Expect = 3.6e-24 Identity = 65/87 (74.71%), Postives = 68/87 (78.16%), Query Frame = 0
BLAST of CsGy2G002580 vs. TrEMBL
Match: tr|A0A0A0LFE4|A0A0A0LFE4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009480 PE=4 SV=1) HSP 1 Score: 413.3 bits (1061), Expect = 4.5e-112 Identity = 265/318 (83.33%), Postives = 266/318 (83.65%), Query Frame = 0
BLAST of CsGy2G002580 vs. TrEMBL
Match: tr|A0A1S3C449|A0A1S3C449_CUCME (transcription factor bHLH66-like OS=Cucumis melo OX=3656 GN=LOC103496446 PE=4 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 2.4e-81 Identity = 227/324 (70.06%), Postives = 236/324 (72.84%), Query Frame = 0
BLAST of CsGy2G002580 vs. TrEMBL
Match: tr|A0A1S3B943|A0A1S3B943_CUCME (transcription factor bHLH82 OS=Cucumis melo OX=3656 GN=LOC103487364 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 4.1e-41 Identity = 136/272 (50.00%), Postives = 164/272 (60.29%), Query Frame = 0
BLAST of CsGy2G002580 vs. TrEMBL
Match: tr|A0A0A0LWM2|A0A0A0LWM2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G269350 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 4.1e-41 Identity = 136/272 (50.00%), Postives = 164/272 (60.29%), Query Frame = 0
BLAST of CsGy2G002580 vs. TrEMBL
Match: tr|A0A2N9G1V1|A0A2N9G1V1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20946 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 2.7e-40 Identity = 138/307 (44.95%), Postives = 153/307 (49.84%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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