Bhi06G001563 (gene) Wax gourd

Overview
NameBhi06G001563
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr6 : 51288050 .. 51288292 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGACTCACCAACTCCCTCCCGGACCTCCATAGCCACCGTCGTGACCACCAGCCGGAGACTGACGCCTCTCAACTCCACCACCACCACCAACTTCAAACCTCCCTCTTCCATCCCTCTTCCTTCTCCTCCGACGATTTCCTCGACCAAATCCTCTCCAACCATCCCTCCTCCCTGGGAACTCCCCGCCGGCCTCCAAAATCCTCACTCCGACCTCCCTCCCCAACCACCGACGCCGTCTAA

mRNA sequence

ATGAGACTCACCAACTCCCTCCCGGACCTCCATAGCCACCGTCGTGACCACCAGCCGGAGACTGACGCCTCTCAACTCCACCACCACCACCAACTTCAAACCTCCCTCTTCCATCCCTCTTCCTTCTCCTCCGACGATTTCCTCGACCAAATCCTCTCCAACCATCCCTCCTCCCTGGGAACTCCCCGCCGGCCTCCAAAATCCTCACTCCGACCTCCCTCCCCAACCACCGACGCCGTCTAA

Coding sequence (CDS)

ATGAGACTCACCAACTCCCTCCCGGACCTCCATAGCCACCGTCGTGACCACCAGCCGGAGACTGACGCCTCTCAACTCCACCACCACCACCAACTTCAAACCTCCCTCTTCCATCCCTCTTCCTTCTCCTCCGACGATTTCCTCGACCAAATCCTCTCCAACCATCCCTCCTCCCTGGGAACTCCCCGCCGGCCTCCAAAATCCTCACTCCGACCTCCCTCCCCAACCACCGACGCCGTCTAA

Protein sequence

MRLTNSLPDLHSHRRDHQPETDASQLHHHHQLQTSLFHPSSFSSDDFLDQILSNHPSSLGTPRRPPKSSLRPPSPTTDAV
Homology
[Close]
BLAST of Bhi06G001563 vs. TrEMBL
Match: tr|A0A0A0LFE4|A0A0A0LFE4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009480 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.8e-08
Identity = 43/76 (56.58%), Postives = 47/76 (61.84%), Query Frame = 0 

Query: 1  MRLTNSLPDLHSHRRD-HQPETDASQLHHHHQLQTSLFHPSSFSSDDFLDQILSNHPSSL 60
          MRLTNSLPDLH+HRR+  Q             LQTSLFHPS+FSSDDFLDQILS  PS  
Sbjct: 1  MRLTNSLPDLHTHRRNPPQXXXXXXXXXXXXXLQTSLFHPSTFSSDDFLDQILSTVPSPW 60

Query: 61 GTPRRPPKSSLRPPSP 76
            P   P   L P +P
Sbjct: 61 ELPPGLPSQPLPPSNP 76

[Close]
BLAST of Bhi06G001563 vs. NCBI nr
Match: XP_022946667.1 (transcription factor bHLH69-like [Cucurbita moschata])

HSP 1 Score: 91.3 bits (225), Expect = 1.6e-15
Identity = 54/79 (68.35%), Postives = 58/79 (73.42%), Query Frame = 0 

Query: 1  MRLTNSLPDLHSHRRDHQPETDASQLHHHHQLQTSLFHPSSFSSDDFLDQILSNHPS--- 60
          MRLTNSLPDLHSHRR+H PETD SQLHHH  LQTS+FHP SFSSDDFLDQILS  P    
Sbjct: 1  MRLTNSLPDLHSHRRNHPPETDDSQLHHH--LQTSVFHPPSFSSDDFLDQILSTAPPPWE 60

Query: 61 -SLGTPRRPPKSSLRPPSP 76
            +G P   P S+L P  P
Sbjct: 61 LPVGLPN--PHSNLPPQPP 75

[Close]
BLAST of Bhi06G001563 vs. NCBI nr
Match: XP_023545593.1 (transcription factor bHLH66-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 90.5 bits (223), Expect = 2.8e-15
Identity = 54/79 (68.35%), Postives = 58/79 (73.42%), Query Frame = 0 

Query: 1  MRLTNSLPDLHSHRRDHQPETDASQLHHHHQLQTSLFHPSSFSSDDFLDQILSNHPS--- 60
          MRLTNSLPDLHSHRR+  PETD SQLHHH  LQTS+FHP SFSSDDFLDQILS  PS   
Sbjct: 1  MRLTNSLPDLHSHRRNQPPETDDSQLHHH--LQTSVFHPPSFSSDDFLDQILSTAPSPWE 60

Query: 61 -SLGTPRRPPKSSLRPPSP 76
            +G P   P S+L P  P
Sbjct: 61 LPIGLPN--PHSNLPPQPP 75

[Close]
BLAST of Bhi06G001563 vs. NCBI nr
Match: XP_022999424.1 (transcription factor bHLH69-like [Cucurbita maxima])

HSP 1 Score: 89.4 bits (220), Expect = 6.2e-15
Identity = 54/79 (68.35%), Postives = 57/79 (72.15%), Query Frame = 0 

Query: 1  MRLTNSLPDLHSHRRDHQPETDASQLHHHHQLQTSLFHPSSFSSDDFLDQILSNHPS--- 60
          MRLTNSLPDLHSHRR+  PETD SQLHHH  LQTSLFHP SFSSDDFLDQILS  P    
Sbjct: 1  MRLTNSLPDLHSHRRNQPPETDDSQLHHH--LQTSLFHPPSFSSDDFLDQILSTAPPPWE 60

Query: 61 -SLGTPRRPPKSSLRPPSP 76
            +G P   P S+L P  P
Sbjct: 61 LPVGLPN--PHSNLPPQPP 75

[Close]
BLAST of Bhi06G001563 vs. NCBI nr
Match: XP_022937836.1 (transcription factor bHLH69-like [Cucurbita moschata])

HSP 1 Score: 84.0 bits (206), Expect = 2.6e-13
Identity = 52/78 (66.67%), Postives = 57/78 (73.08%), Query Frame = 0 

Query: 1  MRLTNSLPDLHSHRRDHQPETDASQLHHH-HQLQTSLFHPSSFSSDDFLDQILSNHPS-- 60
          MRLTNSLPDLHS+RR+  PETDASQLHHH + LQ S  HPSSFSSDDFLDQILS+ P   
Sbjct: 1  MRLTNSLPDLHSNRRNRPPETDASQLHHHQNHLQASHLHPSSFSSDDFLDQILSSIPLPW 60

Query: 61 SLGTPRRPPKSSLRPPSP 76
           L T    P S+L P  P
Sbjct: 61 ELPTGLPNPHSNLPPQPP 78

[Close]
BLAST of Bhi06G001563 vs. NCBI nr
Match: XP_023538199.1 (transcription factor bHLH69-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 83.6 bits (205), Expect = 3.4e-13
Identity = 52/78 (66.67%), Postives = 57/78 (73.08%), Query Frame = 0 

Query: 1  MRLTNSLPDLHSHRRDHQPETDASQLHHH-HQLQTSLFHPSSFSSDDFLDQILSNHPS-- 60
          MRLTNSLPD HS+RR+  PETDASQLHHH + LQTS  HPSSFSSDDFLDQILS+ P   
Sbjct: 1  MRLTNSLPDRHSNRRNRPPETDASQLHHHQNHLQTSHLHPSSFSSDDFLDQILSSIPLPW 60

Query: 61 SLGTPRRPPKSSLRPPSP 76
           L T    P S+L P  P
Sbjct: 61 ELPTGLPNPHSNLPPQPP 78

The following BLAST results are available for this feature:
BLAST of Bhi06G001563 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi06G001563 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi06G001563 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LFE4|A0A0A0LFE4_CUCSA2.8e-0856.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009480 PE=4 SV=1[more]
BLAST of Bhi06G001563 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022946667.11.6e-1568.35transcription factor bHLH69-like [Cucurbita moschata][more]
XP_023545593.12.8e-1568.35transcription factor bHLH66-like [Cucurbita pepo subsp. pepo][more]
XP_022999424.16.2e-1568.35transcription factor bHLH69-like [Cucurbita maxima][more]
XP_022937836.12.6e-1366.67transcription factor bHLH69-like [Cucurbita moschata][more]
XP_023538199.13.4e-1366.67transcription factor bHLH69-like [Cucurbita pepo subsp. pepo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006366 transcription from RNA polymerase II promoter
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi06M001563Bhi06M001563mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..64