CsGy2G002290 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G002290
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	putative nuclease HARBI1
Location	Chr2 : 1506275 .. 1507618 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCAGAGGACTCGCCGGGGACAAGAGAACCACCAGAAGTTCCGCCATGAACGCTGCCGCCGCCGCCATTACCAGAAGCAAGGCCAAGAAACTCGATCAAGAGAACCATCTTAACCATCAACTGATAACCCTCATCGAAACCACCATTTCTTCTGCTCACTCCTTTCTCTCTCTCAACGATCTTCACCTTCTTCCCTCTCAAACCCTCGCCCTTGAATCCCTACTTTGTTCCACTTCATCTTCTCTTCACGCTCTTTCTCCTCGTCTCCCAAAACTTTCCCTACCTCCGCCACTACCTCCACCGCGCCAATGCTGGTTCCAGCGCTTCCTATCCGCGACATCGGACGTCGATTGCGATCCGAGATGGAATCTCTCTTTCCGTATGTCGAAATCCTCTTTCTCCCTCCTCCTTCGTCTCCTTTCTCCGATTCAAAGCTCCCCATCCTCTTCAGTTCCTCCCGATTGTGCTTTAGCTGCTGCGCTTTTCCGATTGGCGCATGGCGCGAGCTACAAGGCGGTTGGGAGACGGTTTGGGATCGATTCTGCTGATGCTTGTCGGTCGTTTTATGCTGTTTGTAAAGCTATTAATGAGAAATTGGGGCATTTGCTTGAGTTACGGTCTGACATTGATCGGATTGTTGTGGGATTTGGGTGGATTTCGCTTCCGAATTGTTGTGGGGTTTTAGGTCTAAGAAGATTTGGGTTTGAAGGTGAGCTGAAAAATGGATCGCTTCTGGTTCAAGCATTAGTCGATGCTGAAGGGAGGTTTCTGGATGTCTCTGCTGGTTGGCCGAGCTCCATGAAACCTGCAACAATCTTGCGGCAGAGCAAACTATATGCAGAAATTGAGAAATCTAGTGAATTACTGAAGGGTCCTGTTTATAATCTCGACAATGAAAAACCCATTCCCCAATACTTGATCGGTGATTCTTGCTTCCCCCTTTTGCCATGGCTTTTGACACCATATATGGAACTGAATGAAGAAGATAGTTCTGGCTTTTGTGGGAGAGCATTCAATTCCACACATGGCCGTGCAATGGCGTTGGTTAACACAGCATTTTGCAGACTCCGAGCTCGGTGGAAGCTCTTGTCAAAACCATGGAAGGAAGGATGTAGAGATTTTTTCCCATTTATTATATTGACTGGATGTCTGCTGCAGAATTTCCTGATTAAATGCAGTGAGAAACTAGATGAAGAGCAAGATCAAGAAGAAGGAGCAAGTTGCTCAAGTGAGGAGCAAAAGTTTCCTCTTTTCGATGGTGAGATAGGAGATGGTAGAGGAAAGGATATCAGAGATGCCCTTGCCTTGCACTTGAGTAGCCTGAACTACAGAAGATGA

mRNA sequence

ATGGCCACCAGAGGACTCGCCGGGGACAAGAGAACCACCAGAAGTTCCGCCATGAACGCTGCCGCCGCCGCCATTACCAGAAGCAAGGCCAAGAAACTCGATCAAGAGAACCATCTTAACCATCAACTGATAACCCTCATCGAAACCACCATTTCTTCTGCTCACTCCTTTCTCTCTCTCAACGATCTTCACCTTCTTCCCTCTCAAACCCTCGCCCTTGAATCCCTACTTTGTTCCACTTCATCTTCTCTTCACGCTCTTTCTCCTCGTCTCCCAAAACTTTCCCTACCTCCGCCACTACCTCCACCGCGCCAATGCTGGTTCCAGCGCTTCCTATCCGCGACATCGGACGTCGATTGCGATCCGAGATGGAATCTCTCTTTCCGTATGTCGAAATCCTCTTTCTCCCTCCTCCTTCGTCTCCTTTCTCCGATTCAAAGCTCCCCATCCTCTTCAGTTCCTCCCGATTGTGCTTTAGCTGCTGCGCTTTTCCGATTGGCGCATGGCGCGAGCTACAAGGCGGTTGGGAGACGGTTTGGGATCGATTCTGCTGATGCTTGTCGGTCGTTTTATGCTGTTTGTAAAGCTATTAATGAGAAATTGGGGCATTTGCTTGAGTTACGGTCTGACATTGATCGGATTGTTGTGGGATTTGGGTGGATTTCGCTTCCGAATTGTTGTGGGGTTTTAGGTCTAAGAAGATTTGGGTTTGAAGGTGAGCTGAAAAATGGATCGCTTCTGGTTCAAGCATTAGTCGATGCTGAAGGGAGGTTTCTGGATGTCTCTGCTGGTTGGCCGAGCTCCATGAAACCTGCAACAATCTTGCGGCAGAGCAAACTATATGCAGAAATTGAGAAATCTAGTGAATTACTGAAGGGTCCTGTTTATAATCTCGACAATGAAAAACCCATTCCCCAATACTTGATCGGTGATTCTTGCTTCCCCCTTTTGCCATGGCTTTTGACACCATATATGGAACTGAATGAAGAAGATAGTTCTGGCTTTTGTGGGAGAGCATTCAATTCCACACATGGCCGTGCAATGGCGTTGGTTAACACAGCATTTTGCAGACTCCGAGCTCGGTGGAAGCTCTTGTCAAAACCATGGAAGGAAGGATGTAGAGATTTTTTCCCATTTATTATATTGACTGGATGTCTGCTGCAGAATTTCCTGATTAAATGCAGTGAGAAACTAGATGAAGAGCAAGATCAAGAAGAAGGAGCAAGTTGCTCAAGTGAGGAGCAAAAGTTTCCTCTTTTCGATGGTGAGATAGGAGATGGTAGAGGAAAGGATATCAGAGATGCCCTTGCCTTGCACTTGAGTAGCCTGAACTACAGAAGATGA

Coding sequence (CDS)

ATGGCCACCAGAGGACTCGCCGGGGACAAGAGAACCACCAGAAGTTCCGCCATGAACGCTGCCGCCGCCGCCATTACCAGAAGCAAGGCCAAGAAACTCGATCAAGAGAACCATCTTAACCATCAACTGATAACCCTCATCGAAACCACCATTTCTTCTGCTCACTCCTTTCTCTCTCTCAACGATCTTCACCTTCTTCCCTCTCAAACCCTCGCCCTTGAATCCCTACTTTGTTCCACTTCATCTTCTCTTCACGCTCTTTCTCCTCGTCTCCCAAAACTTTCCCTACCTCCGCCACTACCTCCACCGCGCCAATGCTGGTTCCAGCGCTTCCTATCCGCGACATCGGACGTCGATTGCGATCCGAGATGGAATCTCTCTTTCCGTATGTCGAAATCCTCTTTCTCCCTCCTCCTTCGTCTCCTTTCTCCGATTCAAAGCTCCCCATCCTCTTCAGTTCCTCCCGATTGTGCTTTAGCTGCTGCGCTTTTCCGATTGGCGCATGGCGCGAGCTACAAGGCGGTTGGGAGACGGTTTGGGATCGATTCTGCTGATGCTTGTCGGTCGTTTTATGCTGTTTGTAAAGCTATTAATGAGAAATTGGGGCATTTGCTTGAGTTACGGTCTGACATTGATCGGATTGTTGTGGGATTTGGGTGGATTTCGCTTCCGAATTGTTGTGGGGTTTTAGGTCTAAGAAGATTTGGGTTTGAAGGTGAGCTGAAAAATGGATCGCTTCTGGTTCAAGCATTAGTCGATGCTGAAGGGAGGTTTCTGGATGTCTCTGCTGGTTGGCCGAGCTCCATGAAACCTGCAACAATCTTGCGGCAGAGCAAACTATATGCAGAAATTGAGAAATCTAGTGAATTACTGAAGGGTCCTGTTTATAATCTCGACAATGAAAAACCCATTCCCCAATACTTGATCGGTGATTCTTGCTTCCCCCTTTTGCCATGGCTTTTGACACCATATATGGAACTGAATGAAGAAGATAGTTCTGGCTTTTGTGGGAGAGCATTCAATTCCACACATGGCCGTGCAATGGCGTTGGTTAACACAGCATTTTGCAGACTCCGAGCTCGGTGGAAGCTCTTGTCAAAACCATGGAAGGAAGGATGTAGAGATTTTTTCCCATTTATTATATTGACTGGATGTCTGCTGCAGAATTTCCTGATTAAATGCAGTGAGAAACTAGATGAAGAGCAAGATCAAGAAGAAGGAGCAAGTTGCTCAAGTGAGGAGCAAAAGTTTCCTCTTTTCGATGGTGAGATAGGAGATGGTAGAGGAAAGGATATCAGAGATGCCCTTGCCTTGCACTTGAGTAGCCTGAACTACAGAAGATGA

Protein sequence

MATRGLAGDKRTTRSSAMNAAAAAITRSKAKKLDQENHLNHQLITLIETTISSAHSFLSLNDLHLLPSQTLALESLLCSTSSSLHALSPRLPKLSLPPPLPPPRQCWFQRFLSATSDVDCDPRWNLSFRMSKSSFSLLLRLLSPIQSSPSSSVPPDCALAAALFRLAHGASYKAVGRRFGIDSADACRSFYAVCKAINEKLGHLLELRSDIDRIVVGFGWISLPNCCGVLGLRRFGFEGELKNGSLLVQALVDAEGRFLDVSAGWPSSMKPATILRQSKLYAEIEKSSELLKGPVYNLDNEKPIPQYLIGDSCFPLLPWLLTPYMELNEEDSSGFCGRAFNSTHGRAMALVNTAFCRLRARWKLLSKPWKEGCRDFFPFIILTGCLLQNFLIKCSEKLDEEQDQEEGASCSSEEQKFPLFDGEIGDGRGKDIRDALALHLSSLNYRR

Homology

[Close]

BLAST of CsGy2G002290 vs. NCBI nr
Match: XP_004139403.1 (PREDICTED: putative nuclease HARBI1 [Cucumis sativus] >KGN60730.1 hypothetical protein Csa_2G008700 [Cucumis sativus])

HSP 1 Score: 896.0 bits (2314), Expect = 5.3e-257
Identity = 447/447 (100.00%), Postives = 447/447 (100.00%), Query Frame = 0


Query: 1   MATRGLAGDKRTTRSSAMNAAAAAITRSKAKKLDQENHLNHQLITLIETTISSAHSFLSL 60
           MATRGLAGDKRTTRSSAMNAAAAAITRSKAKKLDQENHLNHQLITLIETTISSAHSFLSL
Sbjct: 1   MATRGLAGDKRTTRSSAMNAAAAAITRSKAKKLDQENHLNHQLITLIETTISSAHSFLSL 60

Query: 61  NDLHLLPSQTLALESLLCSTSSSLHALSPRLPKLSLPPPLPPPRQCWFQRFLSATSDVDC 120
           NDLHLLPSQTLALESLLCSTSSSLHALSPRLPKLSLPPPLPPPRQCWFQRFLSATSDVDC
Sbjct: 61  NDLHLLPSQTLALESLLCSTSSSLHALSPRLPKLSLPPPLPPPRQCWFQRFLSATSDVDC 120

Query: 121 DPRWNLSFRMSKSSFSLLLRLLSPIQSSPSSSVPPDCALAAALFRLAHGASYKAVGRRFG 180
           DPRWNLSFRMSKSSFSLLLRLLSPIQSSPSSSVPPDCALAAALFRLAHGASYKAVGRRFG
Sbjct: 121 DPRWNLSFRMSKSSFSLLLRLLSPIQSSPSSSVPPDCALAAALFRLAHGASYKAVGRRFG 180

Query: 181 IDSADACRSFYAVCKAINEKLGHLLELRSDIDRIVVGFGWISLPNCCGVLGLRRFGFEGE 240
           IDSADACRSFYAVCKAINEKLGHLLELRSDIDRIVVGFGWISLPNCCGVLGLRRFGFEGE
Sbjct: 181 IDSADACRSFYAVCKAINEKLGHLLELRSDIDRIVVGFGWISLPNCCGVLGLRRFGFEGE 240

Query: 241 LKNGSLLVQALVDAEGRFLDVSAGWPSSMKPATILRQSKLYAEIEKSSELLKGPVYNLDN 300
           LKNGSLLVQALVDAEGRFLDVSAGWPSSMKPATILRQSKLYAEIEKSSELLKGPVYNLDN
Sbjct: 241 LKNGSLLVQALVDAEGRFLDVSAGWPSSMKPATILRQSKLYAEIEKSSELLKGPVYNLDN 300

Query: 301 EKPIPQYLIGDSCFPLLPWLLTPYMELNEEDSSGFCGRAFNSTHGRAMALVNTAFCRLRA 360
           EKPIPQYLIGDSCFPLLPWLLTPYMELNEEDSSGFCGRAFNSTHGRAMALVNTAFCRLRA
Sbjct: 301 EKPIPQYLIGDSCFPLLPWLLTPYMELNEEDSSGFCGRAFNSTHGRAMALVNTAFCRLRA 360

Query: 361 RWKLLSKPWKEGCRDFFPFIILTGCLLQNFLIKCSEKLDEEQDQEEGASCSSEEQKFPLF 420
           RWKLLSKPWKEGCRDFFPFIILTGCLLQNFLIKCSEKLDEEQDQEEGASCSSEEQKFPLF
Sbjct: 361 RWKLLSKPWKEGCRDFFPFIILTGCLLQNFLIKCSEKLDEEQDQEEGASCSSEEQKFPLF 420

Query: 421 DGEIGDGRGKDIRDALALHLSSLNYRR 448
           DGEIGDGRGKDIRDALALHLSSLNYRR
Sbjct: 421 DGEIGDGRGKDIRDALALHLSSLNYRR 447

[Close]

BLAST of CsGy2G002290 vs. NCBI nr
Match: XP_008457314.1 (PREDICTED: putative nuclease HARBI1 [Cucumis melo])

HSP 1 Score: 859.8 bits (2220), Expect = 4.2e-246
Identity = 434/447 (97.09%), Postives = 437/447 (97.76%), Query Frame = 0


Query: 1   MATRGLAGDKRTTRSSAMNAAAAAITRSKAKKLDQENHLNHQLITLIETTISSAHSFLSL 60
           MATRGLAGDKRTTRSSAMN AAAAITRSKAKKLDQENHLNHQLITLIETTISSA SFLSL
Sbjct: 1   MATRGLAGDKRTTRSSAMN-AAAAITRSKAKKLDQENHLNHQLITLIETTISSARSFLSL 60

Query: 61  NDLHLLPSQTLALESLLCSTSSSLHALSPRLPKLSLPPPLPPPRQCWFQRFLSATSDVDC 120
           NDLHLLPSQTLALESLLCSTSSSLHALSPRLPKLSLP PLPPPRQCWFQRFLSATSDVDC
Sbjct: 61  NDLHLLPSQTLALESLLCSTSSSLHALSPRLPKLSLPSPLPPPRQCWFQRFLSATSDVDC 120

Query: 121 DPRWNLSFRMSKSSFSLLLRLLSPIQSSPSSSVPPDCALAAALFRLAHGASYKAVGRRFG 180
           DPRWNLSFRMSKSSFSLLLRLLSPIQS  SSSVPPDCALAAALFRLAHGASYKAVGRRFG
Sbjct: 121 DPRWNLSFRMSKSSFSLLLRLLSPIQSPSSSSVPPDCALAAALFRLAHGASYKAVGRRFG 180

Query: 181 IDSADACRSFYAVCKAINEKLGHLLELRSDIDRIVVGFGWISLPNCCGVLGLRRFGFEGE 240
           IDSADACRSFYAVCKAINEKLGHLLELRSDIDRIVVGFGWISLPNCCGVLGLRRFGFEGE
Sbjct: 181 IDSADACRSFYAVCKAINEKLGHLLELRSDIDRIVVGFGWISLPNCCGVLGLRRFGFEGE 240

Query: 241 LKNGSLLVQALVDAEGRFLDVSAGWPSSMKPATILRQSKLYAEIEKSSELLKGPVYNLDN 300
           LKNGSLLVQALVDAEGRFLDVSAGWPSSMKPATILRQSKLY EIEKSSELLKGPVYNLD+
Sbjct: 241 LKNGSLLVQALVDAEGRFLDVSAGWPSSMKPATILRQSKLYEEIEKSSELLKGPVYNLDD 300

Query: 301 EKPIPQYLIGDSCFPLLPWLLTPYMELNEEDSSGFCGRAFNSTHGRAMALVNTAFCRLRA 360
           EKPIPQYLIGDSCFPL PWLLTPY+ELNEEDSSGF  RAFNSTHGRAMALVNTAFCRLRA
Sbjct: 301 EKPIPQYLIGDSCFPLFPWLLTPYIELNEEDSSGFRERAFNSTHGRAMALVNTAFCRLRA 360

Query: 361 RWKLLSKPWKEGCRDFFPFIILTGCLLQNFLIKCSEKLDEEQDQEEGASCSSEEQKFPLF 420
           RWKLLSKPWKEGCRDFFPFIILTGCLLQNFLIKCSEKLDEEQDQEEGASCSSEEQKFP F
Sbjct: 361 RWKLLSKPWKEGCRDFFPFIILTGCLLQNFLIKCSEKLDEEQDQEEGASCSSEEQKFPPF 420

Query: 421 DGEIGDGRGKDIRDALALHLSSLNYRR 448
           DGEIGDGRGKDIRDALALHLSSL+YRR
Sbjct: 421 DGEIGDGRGKDIRDALALHLSSLSYRR 446

[Close]

BLAST of CsGy2G002290 vs. NCBI nr
Match: XP_023536803.1 (protein ALP1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 767.3 bits (1980), Expect = 2.9e-218
Identity = 389/449 (86.64%), Postives = 412/449 (91.76%), Query Frame = 0


Query: 1   MATRGLAGDKRTTRSSAMNAAAAAITRSKAKKLDQENHLNHQLITLIETTISSAHSFLSL 60
           MA  G +GDKRTTRSSA+NA A   TRSKAKK D++NHL HQL+TLIETTISSAHSFLSL
Sbjct: 1   MAAGGFSGDKRTTRSSAINAGAVT-TRSKAKKSDRKNHLKHQLVTLIETTISSAHSFLSL 60

Query: 61  NDLHLLPSQTLALESLLCSTSSSLHALSPRLPKLSLPPPLPPPRQCWFQRFLSATSDVDC 120
           NDLHLLPSQTLALES + STSSSL ALSP LPKLSL    PPPRQCWFQRFLSAT++VDC
Sbjct: 61  NDLHLLPSQTLALESFIYSTSSSLQALSPCLPKLSLH---PPPRQCWFQRFLSATAEVDC 120

Query: 121 DPRWNLSFRMSKSSFSLLLRLLSPIQSSPSSSVPPDCALAAALFRLAHGASYKAVGRRFG 180
           DPRWNL FRMSKSSFSLLLRLLSPIQS  S+SVPPDCALAAALFRLAHGASYKAVGRRFG
Sbjct: 121 DPRWNLFFRMSKSSFSLLLRLLSPIQSCSSTSVPPDCALAAALFRLAHGASYKAVGRRFG 180

Query: 181 IDSADACRSFYAVCKAINEKLGHLLELRSDIDRIVVGFGWISLPNCCGVLGLRRFGFEGE 240
           IDSADACRSFYAVCKAIN+KLGHLLELRSDIDRIVVGFGWISLPNCCGVLGLRRFG EG+
Sbjct: 181 IDSADACRSFYAVCKAINDKLGHLLELRSDIDRIVVGFGWISLPNCCGVLGLRRFGVEGD 240

Query: 241 L--KNGSLLVQALVDAEGRFLDVSAGWPSSMKPATILRQSKLYAEIEKSSELLKGPVYNL 300
           L  K+GSLLVQALVDAEGRFLDVSAGWPSSMKP TILRQSKLYAEIEKS ELLKGPVYNL
Sbjct: 241 LLGKDGSLLVQALVDAEGRFLDVSAGWPSSMKPETILRQSKLYAEIEKSGELLKGPVYNL 300

Query: 301 DNEKPIPQYLIGDSCFPLLPWLLTPYMELNEEDSSGFCGRAFNSTHGRAMALVNTAFCRL 360
           D+ KPI QYLIGDSCFPLLPWLLTPYM+LNEEDSSGF  RAFNSTH RAM LVNTAFC++
Sbjct: 301 DDGKPISQYLIGDSCFPLLPWLLTPYMKLNEEDSSGFPERAFNSTHNRAMGLVNTAFCKV 360

Query: 361 RARWKLLSKPWKEGCRDFFPFIILTGCLLQNFLIKCSEKLDEEQDQEEGASCSSEEQKFP 420
           RARWKLLSKPWKE CRDFFPFI+LTGCLL NFLIKCSEKL EEQD+++GASCSSEEQKFP
Sbjct: 361 RARWKLLSKPWKEECRDFFPFIVLTGCLLHNFLIKCSEKLVEEQDEDDGASCSSEEQKFP 420

Query: 421 LFDGEIGDGRGKDIRDALALHLSSLNYRR 448
           L+DGE GD RGKDIRDALALHLS L++RR
Sbjct: 421 LYDGETGDDRGKDIRDALALHLSRLSFRR 445

[Close]

BLAST of CsGy2G002290 vs. NCBI nr
Match: XP_022938170.1 (protein ALP1-like [Cucurbita moschata] >XP_022938171.1 protein ALP1-like [Cucurbita moschata])

HSP 1 Score: 766.9 bits (1979), Expect = 3.7e-218
Identity = 389/449 (86.64%), Postives = 412/449 (91.76%), Query Frame = 0


Query: 1   MATRGLAGDKRTTRSSAMNAAAAAITRSKAKKLDQENHLNHQLITLIETTISSAHSFLSL 60
           MA  G +GDKRTTRSSA+NA A   TRSKAKK D++NHL HQL+TLIETTISSAHSFLSL
Sbjct: 1   MAAGGFSGDKRTTRSSAINAGAVT-TRSKAKKSDRKNHLKHQLVTLIETTISSAHSFLSL 60

Query: 61  NDLHLLPSQTLALESLLCSTSSSLHALSPRLPKLSLPPPLPPPRQCWFQRFLSATSDVDC 120
           NDLHLLPSQTLALES + STSSSL ALSP LPKLSL    PPPRQCWFQRFLSAT++VDC
Sbjct: 61  NDLHLLPSQTLALESFIYSTSSSLQALSPCLPKLSLH---PPPRQCWFQRFLSATAEVDC 120

Query: 121 DPRWNLSFRMSKSSFSLLLRLLSPIQSSPSSSVPPDCALAAALFRLAHGASYKAVGRRFG 180
           DPRWNL FRMSKSSFSLLLRLLSPIQSS S+SVPPDCALAAALFRLAHGASYKAVGRRFG
Sbjct: 121 DPRWNLFFRMSKSSFSLLLRLLSPIQSSSSTSVPPDCALAAALFRLAHGASYKAVGRRFG 180

Query: 181 IDSADACRSFYAVCKAINEKLGHLLELRSDIDRIVVGFGWISLPNCCGVLGLRRFGFEGE 240
           IDSADACRSFYAVCKAIN+KLGHLLELRSDIDRIVVGFGWISLPNCCGVLGLRRFG EG+
Sbjct: 181 IDSADACRSFYAVCKAINDKLGHLLELRSDIDRIVVGFGWISLPNCCGVLGLRRFGVEGD 240

Query: 241 L--KNGSLLVQALVDAEGRFLDVSAGWPSSMKPATILRQSKLYAEIEKSSELLKGPVYNL 300
           L  K+GSLLVQALVDAEGRFLDVSAGWPSSMKP TILRQSKLYAEIEKS ELLKGPVYNL
Sbjct: 241 LLGKDGSLLVQALVDAEGRFLDVSAGWPSSMKPETILRQSKLYAEIEKSGELLKGPVYNL 300

Query: 301 DNEKPIPQYLIGDSCFPLLPWLLTPYMELNEEDSSGFCGRAFNSTHGRAMALVNTAFCRL 360
           D+ KPI QYLIGDSCFPLLPWLLTPYM+LNEEDSSGF  RAFNSTH RAM LVNTAFC++
Sbjct: 301 DDGKPISQYLIGDSCFPLLPWLLTPYMKLNEEDSSGFPERAFNSTHNRAMGLVNTAFCKV 360

Query: 361 RARWKLLSKPWKEGCRDFFPFIILTGCLLQNFLIKCSEKLDEEQDQEEGASCSSEEQKFP 420
           RARWKLLSKPWKE CRDFFPFI+LTGCLL NFLIKCSEKL+EEQD+ +GASCSSEEQKF 
Sbjct: 361 RARWKLLSKPWKEECRDFFPFIVLTGCLLHNFLIKCSEKLEEEQDEXDGASCSSEEQKFA 420

Query: 421 LFDGEIGDGRGKDIRDALALHLSSLNYRR 448
           L+DGE GD RGKDIRDALALHLS L++RR
Sbjct: 421 LYDGETGDDRGKDIRDALALHLSRLSFRR 445

[Close]

BLAST of CsGy2G002290 vs. NCBI nr
Match: XP_022965738.1 (protein ALP1-like [Cucurbita maxima] >XP_022965739.1 protein ALP1-like [Cucurbita maxima])

HSP 1 Score: 736.5 bits (1900), Expect = 5.4e-209
Identity = 376/449 (83.74%), Postives = 398/449 (88.64%), Query Frame = 0


Query: 1   MATRGLAGDKRTTRSSAMNAAAAAITRSKAKKLDQENHLNHQLITLIETTISSAHSFLSL 60
           MA  G +GDKRTTRSSA+NA A   TRSKAKK D++NHL HQL+TLIETTISSAHSFLSL
Sbjct: 1   MAAGGFSGDKRTTRSSAINAGAVT-TRSKAKKSDRKNHLKHQLVTLIETTISSAHSFLSL 60

Query: 61  NDLHLLPSQTLALESLLCSTSSSLHALSPRLPKLSLPPPLPPPRQCWFQRFLSATSDVDC 120
           NDLHLLPSQTLALES + STSSSL ALSP LPKLSL    PPPRQCWFQRFLSAT++VDC
Sbjct: 61  NDLHLLPSQTLALESFIYSTSSSLQALSPCLPKLSLH---PPPRQCWFQRFLSATAEVDC 120

Query: 121 DPRWNLSFRMSKSSFSLLLRLLSPIQSSPSSSVPPDCALAAALFRLAHGASYKAVGRRFG 180
           DPRWNL FRMSKSSFSLLLRLLSPIQSS S+SVPPDCALAAALFRLAHGASYKAVGRRFG
Sbjct: 121 DPRWNLFFRMSKSSFSLLLRLLSPIQSSSSTSVPPDCALAAALFRLAHGASYKAVGRRFG 180

Query: 181 IDSADACRSFYAVCKAINEKLGHLLELRSDIDRIVVGFGWISLPNCCGVLGLRRFGFEGE 240
           IDSADACRSFYAVCKAIN+KLGHLLELRSDIDRIVVGFGWISLPNCCGVLGLRRFG EG+
Sbjct: 181 IDSADACRSFYAVCKAINDKLGHLLELRSDIDRIVVGFGWISLPNCCGVLGLRRFGVEGD 240

Query: 241 L--KNGSLLVQALVDAEGRFLDVSAGWPSSMKPATILRQSKLYAEIEKSSELLKGPVYNL 300
           L  K+GSLLVQALVDAEGRFLDVSAGWPSSMKP TILRQSKLYAEIEKS ELLKGPVYNL
Sbjct: 241 LLGKDGSLLVQALVDAEGRFLDVSAGWPSSMKPETILRQSKLYAEIEKSGELLKGPVYNL 300

Query: 301 DNEKPIPQYLIGDSCFPLLPWLLTPYMELNEEDSSGFCGRAFNSTHGRAMALVNTAFCRL 360
           D+ KPI QYLIGDSCFPLLPWLLTPYM+LNEEDSSGF  RAFNSTH RAM LVNTAFC++
Sbjct: 301 DDGKPISQYLIGDSCFPLLPWLLTPYMKLNEEDSSGFPERAFNSTHNRAMGLVNTAFCKV 360

Query: 361 RARWKLLSKPWKEGCRDFFPFIILTGCLLQNFLIKCSEKLDEEQDQEEGASCSSEEQKFP 420
           RARWKLLSKPWKE CRDFFPF++LTGCLL NFLIKCSEKL+                KFP
Sbjct: 361 RARWKLLSKPWKEECRDFFPFVVLTGCLLHNFLIKCSEKLEXXXXXXXXXXXXXXXXKFP 420

Query: 421 LFDGEIGDGRGKDIRDALALHLSSLNYRR 448
           L+DGE GD RGKDIRDALALHLS L++RR
Sbjct: 421 LYDGETGDDRGKDIRDALALHLSRLSFRR 445

[Close]

BLAST of CsGy2G002290 vs. TAIR10
Match: AT1G72270.1 (Ribosome 60S biogenesis N-terminal (InterPro:IPR021714))

HSP 1 Score: 271.6 bits (693), Expect = 8.9e-73
Identity = 175/415 (42.17%), Postives = 233/415 (56.14%), Query Frame = 0


Query: 39  LNHQLITLIETTISSAHSFLSLNDLHLLPSQTLALESLLCSTSSSLHALSPRLPKLSLPP 98
           L   L+  + +  +  +SFL  NDL L PSQTL LESL+ S       +SP         
Sbjct: 21  LKDPLLRRLSSAAAVTNSFLQANDLFLSPSQTLRLESLISSL-----PISPS----XXXX 80

Query: 99  PLPPPRQCWFQRFLSATSDVDCDPRWNLSFRMSKSSFSLLLRLLSPIQSSPSSSVPPDCA 158
                    F RFL++ ++ + DPRW L FRMSKS+F  L  +LS       SS+P   +
Sbjct: 81  XXXXXXXXXFNRFLTSATEDEDDPRWCLYFRMSKSTFFSLYSILS------HSSLP---S 140

Query: 159 LAAALFRLAHGASYKAVGRRFGIDS-ADACRSFYAVCKAINEKLGHLLELRSDIDRIVVG 218
            AA +FRLAHGASY+ +  RFG DS + A RSF+ VCK INEKL         +D     
Sbjct: 141 FAATIFRLAHGASYECLVHRFGFDSTSQASRSFFTVCKLINEKLS------QQLDDPKPD 200

Query: 219 FGWISLPNCCGVLGLRRFGFEGEL--KNGSLLVQALVDAEGRFLDVSAGWPSSMKPATIL 278
           F    LPNC GV+G  RF  +G+L    GS+LVQALVD+ GRF+D+SAGWPS+MKP  I 
Sbjct: 201 FSPNLLPNCYGVVGFGRFEVKGKLLGAKGSILVQALVDSNGRFVDISAGWPSTMKPEAIF 260

Query: 279 RQSKLYAEIEKSSELLKGPVYNLDNEKPIPQYLIGDSCFPLLPWLLTPYMELNEEDSSGF 338
           RQ+KL++  E   E+L G    L N   +P+Y++GDSC PLLPWL+TPY   ++E+S   
Sbjct: 261 RQTKLFSIAE---EVLSGAPTKLGNGVLVPRYILGDSCLPLLPWLVTPYDLTSDEES--- 320

Query: 339 CGRAFNSTHGRAMALVNTAFCRLRARWKLLSKPWKEGCRDFFPFIILTGCLLQNFLIKCS 398
               FN+     +  V  AF ++RARW++L K WK    +F PF+I TGCLL NFL+   
Sbjct: 321 FREEFNNVVHTGLHSVEIAFAKVRARWRILDKKWKPETIEFMPFVITTGCLLHNFLVNSG 380

Query: 399 EKLD---------EEQDQEEGASCSSEEQKFPLFDGEIGDGRGKDIRDALALHLS 442
           +  D         E  D  E      +E++   F+GE      K IRDA+A +LS
Sbjct: 381 DDDDSVEECVNGCEAGDNGEMRKDDDKEEETRSFEGE-AYRESKRIRDAIAENLS 404

[Close]

BLAST of CsGy2G002290 vs. TAIR10
Match: AT3G55350.1 (PIF / Ping-Pong family of plant transposases)

HSP 1 Score: 145.6 bits (366), Expect = 7.4e-35
Identity = 104/361 (28.81%), Postives = 161/361 (44.60%), Query Frame = 0


Query: 107 WFQRFLSATSDVDCDPR-WNLSFRMSKSSFSLLLRLL------SPIQSSPSSSVPPDC-- 166
           W+  F         DP+ +   F++S+ +F  +  L+       P   S S+  P     
Sbjct: 54  WWDGFSRRIYGGSTDPKTFESVFKISRKTFDYICSLVKADFTAKPANFSDSNGNPLSLND 113

Query: 167 ALAAALFRLAHGASYKAVGRRFGIDSADACRSFYAVCKAINEKLGHLLELRSDIDRIVVG 226
            +A AL RL  G S   +G  FG++ +   +  +   +++ E+  H L   S +D I   
Sbjct: 114 RVAVALRRLGSGESLSVIGETFGMNQSTVSQITWRFVESMEERAIHHLSWPSKLDEIKSK 173

Query: 227 FGWIS-LPNCCGVLGL-------------RRFGFEGELKNGSLLVQALVDAEGRFLDVSA 286
           F  IS LPNCCG + +              +   +GE KN S+ +QA+VD + RFLDV A
Sbjct: 174 FEKISGLPNCCGAIDITHIVMNLPAVEPSNKVWLDGE-KNFSMTLQAVVDPDMRFLDVIA 233

Query: 287 GWPSSMKPATILRQSKLYAEIEKSSELLKGPVYNLDNEKPIPQYLIGDSCFPLLPWLLTP 346
           GWP S+    +L+ S  Y  +EK    L G    L     + +Y++GDS FPLLPWLLTP
Sbjct: 234 GWPGSLNDDVVLKNSGFYKLVEKGKR-LNGEKLPLSERTELREYIVGDSGFPLLPWLLTP 293

Query: 347 YMELNEEDSSGFCGRAFNSTHGRAMALVNTAFCRLRARWKLLSKPWKEGCRDFFPFIILT 406
           Y    +   +      FN  H  A      A  +L+ RW++++       R+  P II  
Sbjct: 294 Y----QGKPTSLPQTEFNKRHSEATKAAQMALSKLKDRWRIINGVMWMPDRNRLPRIIFV 353

Query: 407 GCLLQNFLIKCSEKLDEEQDQEEGASCSSEEQKFPLFDGEIGDGRGKDIRDALALHLSSL 445
            CLL N +I       E+Q  ++       +  +     ++ D     +RD L+  L   
Sbjct: 354 CCLLHNIIIDM-----EDQTLDDQPLSQQHDMNYRQRSCKLADEASSVLRDELSDQLCGK 403

[Close]

BLAST of CsGy2G002290 vs. TAIR10
Match: AT3G63270.1 (Putative harbinger transposase-derived nuclease (InterPro:IPR006912))

HSP 1 Score: 131.3 bits (329), Expect = 1.4e-30
Identity = 92/297 (30.98%), Postives = 143/297 (48.15%), Query Frame = 0


Query: 128 FRMSKSSFSLLLRLLSP--IQSSPSSSVPPDCAL-------AAALFRLAHGASYKAVGRR 187
           FR SK++FS +  L+    I   PS  +  +  L       A AL RLA G S  +VG  
Sbjct: 69  FRASKTTFSYICSLVREDLISRPPSGLINIEGRLLSVEKQVAIALRRLASGDSQVSVGAA 128

Query: 188 FGIDSADACRSFYAVCKAINEKLGHLLELRSD--IDRIVVGF-GWISLPNCCGVLGLRRF 247
           FG+  +   +  +   +A+ E+  H L       I+ I   F     LPNCCG +     
Sbjct: 129 FGVGQSTVSQVTWRFIEALEERAKHHLRWPDSDRIEEIKSKFEEMYGLPNCCGAIDTTHI 188

Query: 248 -----------GFEGELKNGSLLVQALVDAEGRFLDVSAGWPSSMKPATILRQSKLYAEI 307
                       +  + KN S+ +Q + D E RFL++  GWP  M  + +L+ S  + ++
Sbjct: 189 IMTLPAVQASDDWCDQEKNYSMFLQGVFDHEMRFLNMVTGWPGGMTVSKLLKFSGFF-KL 248

Query: 308 EKSSELLKGPVYNLDNEKPIPQYLIGDSCFPLLPWLLTPYMELNEEDSSGFCGRAFNSTH 367
            +++++L G    L     I +Y++G   +PLLPWL+TP+   +  DS      AFN  H
Sbjct: 249 CENAQILDGNPKTLSQGAQIREYVVGGISYPLLPWLITPHDSDHPSDSM----VAFNERH 308

Query: 368 GRAMALVNTAFCRLRARWKLLSKPWKEGCRDFFPFIILTGCLLQNFLIKCSEKLDEE 402
            +  ++  TAF +L+  W++LSK      R   P IIL  CLL N +I C + L E+
Sbjct: 309 EKVRSVAATAFQQLKGSWRILSKVMWRPDRRKLPSIILVCCLLHNIIIDCGDYLQED 360

[Close]

BLAST of CsGy2G002290 vs. TAIR10
Match: AT5G12010.1 (unknown protein)

HSP 1 Score: 94.7 bits (234), Expect = 1.5e-19
Identity = 77/300 (25.67%), Postives = 126/300 (42.00%), Query Frame = 0


Query: 127 SFRMSKSSFSLLLRLLSPI----QSSPSSSVPPDCALAAALFRLAHGASYKAVGRRFGID 186
           +FRMSKS+F L+   L+       ++  +++P    +A  ++RLA G   + V ++FG+ 
Sbjct: 178 AFRMSKSTFELICDELNSAVAKEDTALRNAIPVRQRVAVCIWRLATGEPLRLVSKKFGLG 237

Query: 187 SADACRSFYAVCKAINE----------------KLGHLLELRSDIDRIVVGFGWISLPNC 246
            +   +    VCKAI +                 +    E  S I  +V       +P  
Sbjct: 238 ISTCHKLVLEVCKAIKDVLMPKYLQWPDDESLRNIRERFESVSGIPNVVGSMYTTHIPII 297

Query: 247 CGVLGL-----RRFGFEGELKNGSLLVQALVDAEGRFLDVSAGWPSSMKPATILRQSKLY 306
              + +     +R     +  + S+ +QA+V+ +G F D+  GWP SM    +L +S LY
Sbjct: 298 APKISVASYFNKRHTERNQKTSYSITIQAVVNPKGVFTDLCIGWPGSMPDDKVLEKSLLY 357

Query: 307 AEIEKSSELLKGPVYNLDNEKPIPQYLIGDSCFPLLPWLLTPYMELNEEDSSGFCGRAFN 366
                   LLKG             ++ G    PLL W+L PY + N      +   AFN
Sbjct: 358 QRANNGG-LLKG------------MWVAGGPGHPLLDWVLVPYTQQN----LTWTQHAFN 417

Query: 367 STHGRAMALVNTAFCRLRARWKLLSKPWKEGCRDFFPFIILTGCLLQNFLIKCSEKLDEE 402
                   +   AF RL+ RW  L K  +   +D  P ++   C+L N      EK++ E
Sbjct: 418 EKMSEVQGVAKEAFGRLKGRWACLQKRTEVKLQD-LPTVLGACCVLHNICEMREEKMEPE 459

[Close]

BLAST of CsGy2G002290 vs. TAIR10
Match: AT4G29780.1 (unknown protein)

HSP 1 Score: 85.9 bits (211), Expect = 6.9e-17
Identity = 83/319 (26.02%), Postives = 136/319 (42.63%), Query Frame = 0


Query: 128 FRMSKSSFSLLLRLLSPIQSSPSS----SVPPDCALAAALFRLAHGASYKAVGRRFGIDS 187
           FRMSKS+F+L+   L    +  ++    ++P    +   ++RLA GA  + V  RFG+  
Sbjct: 217 FRMSKSTFNLICEELDTTVTKKNTMLRDAIPAPKRVGVCVWRLATGAPLRHVSERFGLGI 276

Query: 188 ADACRSFYAVCKAINEKLGH---LLELRSDIDRIVVGFGWI-SLPNCCGVLGL------- 247
           +   +    VC+AI + L     L    S+I+     F  +  +PN  G +         
Sbjct: 277 STCHKLVIEVCRAIYDVLMPKYLLWPSDSEINSTKAKFESVHKIPNVVGSIYTTHIPIIA 336

Query: 248 ----------RRFGFEGELKNGSLLVQALVDAEGRFLDVSAGWPSSMKPATILRQSKLYA 307
                     +R     +  + S+ VQ +V+A+G F DV  G P S+    IL +S L  
Sbjct: 337 PKVHVAAYFNKRHTERNQKTSYSITVQGVVNADGIFTDVCIGNPGSLTDDQILEKSSLSR 396

Query: 308 EIEKSSELLKGPVYNLDNEKPIPQYLIGDSCFPLLPWLLTPYMELNEEDSSGFCGRAFNS 367
           +   +  +L+              +++G+S FPL  +LL PY   N      +   AFN 
Sbjct: 397 Q-RAARGMLR------------DSWIVGNSGFPLTDYLLVPYTRQN----LTWTQHAFNE 456

Query: 368 THGRAMALVNTAFCRLRARWKLLSKPWKEGCRDFFPFIILTGCLLQNFLIKCSEKLDEEQ 422
           + G    +   AF RL+ RW  L K  +   +D  P+++   C+L N    C  + +E  
Sbjct: 457 SIGEIQGIATAAFERLKGRWACLQKRTEVKLQD-LPYVLGACCVLHNI---CEMRKEE-- 504

[Close]

BLAST of CsGy2G002290 vs. Swiss-Prot
Match: sp|Q9M2U3|ALPL_ARATH (Protein ALP1-like OS=Arabidopsis thaliana OX=3702 GN=At3g55350 PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.3e-33
Identity = 104/361 (28.81%), Postives = 161/361 (44.60%), Query Frame = 0


Query: 107 WFQRFLSATSDVDCDPR-WNLSFRMSKSSFSLLLRLL------SPIQSSPSSSVPPDC-- 166
           W+  F         DP+ +   F++S+ +F  +  L+       P   S S+  P     
Sbjct: 54  WWDGFSRRIYGGSTDPKTFESVFKISRKTFDYICSLVKADFTAKPANFSDSNGNPLSLND 113

Query: 167 ALAAALFRLAHGASYKAVGRRFGIDSADACRSFYAVCKAINEKLGHLLELRSDIDRIVVG 226
            +A AL RL  G S   +G  FG++ +   +  +   +++ E+  H L   S +D I   
Sbjct: 114 RVAVALRRLGSGESLSVIGETFGMNQSTVSQITWRFVESMEERAIHHLSWPSKLDEIKSK 173

Query: 227 FGWIS-LPNCCGVLGL-------------RRFGFEGELKNGSLLVQALVDAEGRFLDVSA 286
           F  IS LPNCCG + +              +   +GE KN S+ +QA+VD + RFLDV A
Sbjct: 174 FEKISGLPNCCGAIDITHIVMNLPAVEPSNKVWLDGE-KNFSMTLQAVVDPDMRFLDVIA 233

Query: 287 GWPSSMKPATILRQSKLYAEIEKSSELLKGPVYNLDNEKPIPQYLIGDSCFPLLPWLLTP 346
           GWP S+    +L+ S  Y  +EK    L G    L     + +Y++GDS FPLLPWLLTP
Sbjct: 234 GWPGSLNDDVVLKNSGFYKLVEKGKR-LNGEKLPLSERTELREYIVGDSGFPLLPWLLTP 293

Query: 347 YMELNEEDSSGFCGRAFNSTHGRAMALVNTAFCRLRARWKLLSKPWKEGCRDFFPFIILT 406
           Y    +   +      FN  H  A      A  +L+ RW++++       R+  P II  
Sbjct: 294 Y----QGKPTSLPQTEFNKRHSEATKAAQMALSKLKDRWRIINGVMWMPDRNRLPRIIFV 353

Query: 407 GCLLQNFLIKCSEKLDEEQDQEEGASCSSEEQKFPLFDGEIGDGRGKDIRDALALHLSSL 445
            CLL N +I       E+Q  ++       +  +     ++ D     +RD L+  L   
Sbjct: 354 CCLLHNIIIDM-----EDQTLDDQPLSQQHDMNYRQRSCKLADEASSVLRDELSDQLCGK 403

[Close]

BLAST of CsGy2G002290 vs. Swiss-Prot
Match: sp|Q94K49|ALP1_ARATH (Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=ALP1 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.6e-29
Identity = 92/297 (30.98%), Postives = 143/297 (48.15%), Query Frame = 0


Query: 128 FRMSKSSFSLLLRLLSP--IQSSPSSSVPPDCAL-------AAALFRLAHGASYKAVGRR 187
           FR SK++FS +  L+    I   PS  +  +  L       A AL RLA G S  +VG  
Sbjct: 69  FRASKTTFSYICSLVREDLISRPPSGLINIEGRLLSVEKQVAIALRRLASGDSQVSVGAA 128

Query: 188 FGIDSADACRSFYAVCKAINEKLGHLLELRSD--IDRIVVGF-GWISLPNCCGVLGLRRF 247
           FG+  +   +  +   +A+ E+  H L       I+ I   F     LPNCCG +     
Sbjct: 129 FGVGQSTVSQVTWRFIEALEERAKHHLRWPDSDRIEEIKSKFEEMYGLPNCCGAIDTTHI 188

Query: 248 -----------GFEGELKNGSLLVQALVDAEGRFLDVSAGWPSSMKPATILRQSKLYAEI 307
                       +  + KN S+ +Q + D E RFL++  GWP  M  + +L+ S  + ++
Sbjct: 189 IMTLPAVQASDDWCDQEKNYSMFLQGVFDHEMRFLNMVTGWPGGMTVSKLLKFSGFF-KL 248

Query: 308 EKSSELLKGPVYNLDNEKPIPQYLIGDSCFPLLPWLLTPYMELNEEDSSGFCGRAFNSTH 367
            +++++L G    L     I +Y++G   +PLLPWL+TP+   +  DS      AFN  H
Sbjct: 249 CENAQILDGNPKTLSQGAQIREYVVGGISYPLLPWLITPHDSDHPSDSM----VAFNERH 308

Query: 368 GRAMALVNTAFCRLRARWKLLSKPWKEGCRDFFPFIILTGCLLQNFLIKCSEKLDEE 402
            +  ++  TAF +L+  W++LSK      R   P IIL  CLL N +I C + L E+
Sbjct: 309 EKVRSVAATAFQQLKGSWRILSKVMWRPDRRKLPSIILVCCLLHNIIIDCGDYLQED 360

[Close]

BLAST of CsGy2G002290 vs. Swiss-Prot
Match: sp|B0BN95|HARB1_RAT (Putative nuclease HARBI1 OS=Rattus norvegicus OX=10116 GN=Harbi1 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.2e-10
Identity = 67/277 (24.19%), Postives = 104/277 (37.55%), Query Frame = 0


Query: 138 LLRLLSPIQSSP---SSSVPPDCALAAALFRLAHGASYKAVGRRFGIDSADACRSFYAVC 197
           L+ LL    S P   S ++ P+  + AAL     G+    +G   GI  A   R    V 
Sbjct: 49  LVELLGASLSRPTQRSRAISPETQILAALGFYTSGSFQTRMGDAIGISQASMSRCVANVT 108

Query: 198 KAINEKLGHLLELRSDIDRIV----VGFGWISLPNCCGVL----------GLRRFGFEGE 257
           +A+ E+    +   +D   I       +G   +P   G +                +   
Sbjct: 109 EALVERASQFIHFPADEAAIQSLKDEFYGLAGMPGVIGAVDCIHVAIKAPNAEDLSYVNR 168

Query: 258 LKNGSLLVQALVDAEGRFLDVSAGWPSSMKPATILRQSKLYAEIEKSSELLKGPVYNLDN 317
               SL    + D  G  + V   WP S++   +L+QS L ++ E               
Sbjct: 169 KGLHSLNCLVVCDIRGALMTVETSWPGSLQDCAVLQQSSLSSQFETG------------- 228

Query: 318 EKPIPQYLIGDSCFPLLPWLLTPYMELNEEDSSGFCGRAFNSTHGRAMALVNTAFCRLR- 377
             P   +L+GDS F L  WLLTP + + E  +     RA ++TH      + T  CR R 
Sbjct: 229 -MPKDSWLLGDSSFFLHTWLLTP-LHIPETPAEYRYNRAHSATHSVIEKTLRTLCCRFRC 288

Query: 378 ---ARWKLLSKPWKEGCRDFFPFIILTGCLLQNFLIK 394
              ++  L   P K         IIL  C+L N  ++
Sbjct: 289 LDGSKGALQYSPEKSS------HIILACCVLHNISLE 304

[Close]

BLAST of CsGy2G002290 vs. Swiss-Prot
Match: sp|Q8BR93|HARB1_MOUSE (Putative nuclease HARBI1 OS=Mus musculus OX=10090 GN=Harbi1 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.0e-09
Identity = 66/275 (24.00%), Postives = 101/275 (36.73%), Query Frame = 0


Query: 138 LLRLLSPIQSSP---SSSVPPDCALAAALFRLAHGASYKAVGRRFGIDSADACRSFYAVC 197
           L+ LL    S P   S ++ P+  + AAL     G+    +G   GI  A   R    V 
Sbjct: 49  LVELLGASLSRPTQRSRAISPETQILAALGFYTSGSFQTRMGDAIGISQASMSRCVANVT 108

Query: 198 KAINEKLGHLLELRSDIDRIVVG------FGWISLPNCCGVL----------GLRRFGFE 257
           +A+ E+    +     +D   V       +G   +P   GV                 + 
Sbjct: 109 EALVERASQFIHF--PVDEAAVQSLKDEFYGLAGMPGVIGVADCIHVAIKAPNAEDLSYV 168

Query: 258 GELKNGSLLVQALVDAEGRFLDVSAGWPSSMKPATILRQSKLYAEIEKSSELLKGPVYNL 317
                 SL    + D  G  + V   WP S++   +L++S L ++ E             
Sbjct: 169 NRKGLHSLNCLVVCDIRGALMTVETSWPGSLQDCAVLQRSSLTSQFETG----------- 228

Query: 318 DNEKPIPQYLIGDSCFPLLPWLLTPYMELNEEDSSGFCGRAFNSTHGRAMALVNTAFCRL 377
               P   +L+GDS F L  WLLTP + + E  +     RA ++TH      + T  CR 
Sbjct: 229 ---MPKDSWLLGDSSFFLRSWLLTP-LPIPETAAEYRYNRAHSATHSVIERTLQTLCCRF 288

Query: 378 RARWKLLSKPWKEGCRDFFP----FIILTGCLLQN 390
           R           +G   + P     IIL  C+L N
Sbjct: 289 RC------LDGSKGALQYSPEKCSHIILACCVLHN 300

[Close]

BLAST of CsGy2G002290 vs. TrEMBL
Match: tr|A0A0A0LFB5|A0A0A0LFB5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008700 PE=4 SV=1)

HSP 1 Score: 896.0 bits (2314), Expect = 3.5e-257
Identity = 447/447 (100.00%), Postives = 447/447 (100.00%), Query Frame = 0


Query: 1   MATRGLAGDKRTTRSSAMNAAAAAITRSKAKKLDQENHLNHQLITLIETTISSAHSFLSL 60
           MATRGLAGDKRTTRSSAMNAAAAAITRSKAKKLDQENHLNHQLITLIETTISSAHSFLSL
Sbjct: 1   MATRGLAGDKRTTRSSAMNAAAAAITRSKAKKLDQENHLNHQLITLIETTISSAHSFLSL 60

Query: 61  NDLHLLPSQTLALESLLCSTSSSLHALSPRLPKLSLPPPLPPPRQCWFQRFLSATSDVDC 120
           NDLHLLPSQTLALESLLCSTSSSLHALSPRLPKLSLPPPLPPPRQCWFQRFLSATSDVDC
Sbjct: 61  NDLHLLPSQTLALESLLCSTSSSLHALSPRLPKLSLPPPLPPPRQCWFQRFLSATSDVDC 120

Query: 121 DPRWNLSFRMSKSSFSLLLRLLSPIQSSPSSSVPPDCALAAALFRLAHGASYKAVGRRFG 180
           DPRWNLSFRMSKSSFSLLLRLLSPIQSSPSSSVPPDCALAAALFRLAHGASYKAVGRRFG
Sbjct: 121 DPRWNLSFRMSKSSFSLLLRLLSPIQSSPSSSVPPDCALAAALFRLAHGASYKAVGRRFG 180

Query: 181 IDSADACRSFYAVCKAINEKLGHLLELRSDIDRIVVGFGWISLPNCCGVLGLRRFGFEGE 240
           IDSADACRSFYAVCKAINEKLGHLLELRSDIDRIVVGFGWISLPNCCGVLGLRRFGFEGE
Sbjct: 181 IDSADACRSFYAVCKAINEKLGHLLELRSDIDRIVVGFGWISLPNCCGVLGLRRFGFEGE 240

Query: 241 LKNGSLLVQALVDAEGRFLDVSAGWPSSMKPATILRQSKLYAEIEKSSELLKGPVYNLDN 300
           LKNGSLLVQALVDAEGRFLDVSAGWPSSMKPATILRQSKLYAEIEKSSELLKGPVYNLDN
Sbjct: 241 LKNGSLLVQALVDAEGRFLDVSAGWPSSMKPATILRQSKLYAEIEKSSELLKGPVYNLDN 300

Query: 301 EKPIPQYLIGDSCFPLLPWLLTPYMELNEEDSSGFCGRAFNSTHGRAMALVNTAFCRLRA 360
           EKPIPQYLIGDSCFPLLPWLLTPYMELNEEDSSGFCGRAFNSTHGRAMALVNTAFCRLRA
Sbjct: 301 EKPIPQYLIGDSCFPLLPWLLTPYMELNEEDSSGFCGRAFNSTHGRAMALVNTAFCRLRA 360

Query: 361 RWKLLSKPWKEGCRDFFPFIILTGCLLQNFLIKCSEKLDEEQDQEEGASCSSEEQKFPLF 420
           RWKLLSKPWKEGCRDFFPFIILTGCLLQNFLIKCSEKLDEEQDQEEGASCSSEEQKFPLF
Sbjct: 361 RWKLLSKPWKEGCRDFFPFIILTGCLLQNFLIKCSEKLDEEQDQEEGASCSSEEQKFPLF 420

Query: 421 DGEIGDGRGKDIRDALALHLSSLNYRR 448
           DGEIGDGRGKDIRDALALHLSSLNYRR
Sbjct: 421 DGEIGDGRGKDIRDALALHLSSLNYRR 447

[Close]

BLAST of CsGy2G002290 vs. TrEMBL
Match: tr|A0A1S3C5W6|A0A1S3C5W6_CUCME (putative nuclease HARBI1 OS=Cucumis melo OX=3656 GN=LOC103497032 PE=4 SV=1)

HSP 1 Score: 859.8 bits (2220), Expect = 2.8e-246
Identity = 434/447 (97.09%), Postives = 437/447 (97.76%), Query Frame = 0


Query: 1   MATRGLAGDKRTTRSSAMNAAAAAITRSKAKKLDQENHLNHQLITLIETTISSAHSFLSL 60
           MATRGLAGDKRTTRSSAMN AAAAITRSKAKKLDQENHLNHQLITLIETTISSA SFLSL
Sbjct: 1   MATRGLAGDKRTTRSSAMN-AAAAITRSKAKKLDQENHLNHQLITLIETTISSARSFLSL 60

Query: 61  NDLHLLPSQTLALESLLCSTSSSLHALSPRLPKLSLPPPLPPPRQCWFQRFLSATSDVDC 120
           NDLHLLPSQTLALESLLCSTSSSLHALSPRLPKLSLP PLPPPRQCWFQRFLSATSDVDC
Sbjct: 61  NDLHLLPSQTLALESLLCSTSSSLHALSPRLPKLSLPSPLPPPRQCWFQRFLSATSDVDC 120

Query: 121 DPRWNLSFRMSKSSFSLLLRLLSPIQSSPSSSVPPDCALAAALFRLAHGASYKAVGRRFG 180
           DPRWNLSFRMSKSSFSLLLRLLSPIQS  SSSVPPDCALAAALFRLAHGASYKAVGRRFG
Sbjct: 121 DPRWNLSFRMSKSSFSLLLRLLSPIQSPSSSSVPPDCALAAALFRLAHGASYKAVGRRFG 180

Query: 181 IDSADACRSFYAVCKAINEKLGHLLELRSDIDRIVVGFGWISLPNCCGVLGLRRFGFEGE 240
           IDSADACRSFYAVCKAINEKLGHLLELRSDIDRIVVGFGWISLPNCCGVLGLRRFGFEGE
Sbjct: 181 IDSADACRSFYAVCKAINEKLGHLLELRSDIDRIVVGFGWISLPNCCGVLGLRRFGFEGE 240

Query: 241 LKNGSLLVQALVDAEGRFLDVSAGWPSSMKPATILRQSKLYAEIEKSSELLKGPVYNLDN 300
           LKNGSLLVQALVDAEGRFLDVSAGWPSSMKPATILRQSKLY EIEKSSELLKGPVYNLD+
Sbjct: 241 LKNGSLLVQALVDAEGRFLDVSAGWPSSMKPATILRQSKLYEEIEKSSELLKGPVYNLDD 300

Query: 301 EKPIPQYLIGDSCFPLLPWLLTPYMELNEEDSSGFCGRAFNSTHGRAMALVNTAFCRLRA 360
           EKPIPQYLIGDSCFPL PWLLTPY+ELNEEDSSGF  RAFNSTHGRAMALVNTAFCRLRA
Sbjct: 301 EKPIPQYLIGDSCFPLFPWLLTPYIELNEEDSSGFRERAFNSTHGRAMALVNTAFCRLRA 360

Query: 361 RWKLLSKPWKEGCRDFFPFIILTGCLLQNFLIKCSEKLDEEQDQEEGASCSSEEQKFPLF 420
           RWKLLSKPWKEGCRDFFPFIILTGCLLQNFLIKCSEKLDEEQDQEEGASCSSEEQKFP F
Sbjct: 361 RWKLLSKPWKEGCRDFFPFIILTGCLLQNFLIKCSEKLDEEQDQEEGASCSSEEQKFPPF 420

Query: 421 DGEIGDGRGKDIRDALALHLSSLNYRR 448
           DGEIGDGRGKDIRDALALHLSSL+YRR
Sbjct: 421 DGEIGDGRGKDIRDALALHLSSLSYRR 446

[Close]

BLAST of CsGy2G002290 vs. TrEMBL
Match: tr|M5VQK6|M5VQK6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G257400 PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 9.0e-128
Identity = 242/410 (59.02%), Postives = 298/410 (72.68%), Query Frame = 0


Query: 43  LITLIETTISSAHSFLSLNDLHLLPSQTLALESLLCSTSSSLHALSPRLPKLSLPPPLPP 102
           L++L+ T  S AHSFLS NDL LLPSQTL LE+LL                         
Sbjct: 35  LVSLVATATSLAHSFLSQNDLLLLPSQTLTLETLLSXXXXXXXXXXXXXXXXXXXXXXXX 94

Query: 103 PR--QCWFQRFLSATS-DVDCDPRWNLSFRMSKSSFSLLLRLLSPIQSSPSSSVPPDCAL 162
               +CWF RFLSATS   + D RW+ +FRMS+ SFS+LL LLSP  +S   S+PP+  L
Sbjct: 95  XXXLECWFSRFLSATSASRNFDSRWSYTFRMSEHSFSILLSLLSPFLNSTIPSIPPNFVL 154

Query: 163 AAALFRLAHGASYKAVGRRFGIDSADACRSFYAVCKAINEKLGHLLELRSDIDRIVVGFG 222
           AAA++RLAHGASYKAVGRRFG+DS +ACR+F+AVCKA+++KLG+L E RSDI RIV GFG
Sbjct: 155 AAAIYRLAHGASYKAVGRRFGLDSVEACRAFFAVCKAVSDKLGNLFEFRSDIARIVGGFG 214

Query: 223 WISLPNCCGVLGLRRFGFEGEL--KNGSLLVQALVDAEGRFLDVSAGWPSSMKPATILRQ 282
           WISLPNCCGVLG  RFG  GE+   NGSLLVQALVD+EGRFLDVSAGWPS+MK  +I RQ
Sbjct: 215 WISLPNCCGVLGFGRFGVGGEVLGPNGSLLVQALVDSEGRFLDVSAGWPSAMKLESIFRQ 274

Query: 283 SKLYAEIEKSSELLKGPVYNLDNEKPIPQYLIGDSCFPLLPWLLTPYMELNEEDSSGFCG 342
           +KLY  +E+S +LL GPVY L N K IPQY++GDSCFPLLPWLLTPY+  +E DS G   
Sbjct: 275 TKLYLGVEESRDLLNGPVYELGNGKAIPQYILGDSCFPLLPWLLTPYIRSDEADSFGSLE 334

Query: 343 RAFNSTHGRAMALVNTAFCRLRARWKLLSKPWKEGCRDFFPFIILTGCLLQNFLIKCSEK 402
           +AFNS H RAM LV+TAF R+RARW+LLS+ WKE C +F PF+I+TGCLL NFLIKCSE 
Sbjct: 335 KAFNSVHSRAMGLVDTAFGRVRARWQLLSRQWKEECVEFLPFVIVTGCLLHNFLIKCSEP 394

Query: 403 LDEEQDQEEGASCSSEEQKFPLFDGEIGDGRGKDIRDALALHLSSLNYRR 448
           + ++  +      SS E++ P+F G++ D  G+ +RD LA HLS ++ RR
Sbjct: 395 MPDDNVK------SSREEELPVFHGQV-DESGERMRDVLAAHLSRVSLRR 437

[Close]

BLAST of CsGy2G002290 vs. TrEMBL
Match: tr|A0A068UQF2|A0A068UQF2_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00031239001 PE=4 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 6.0e-124
Identity = 245/413 (59.32%), Postives = 296/413 (71.67%), Query Frame = 0


Query: 43  LITLIETTISSAHSFLSLNDLHLLPSQTLALESLLCSTSSS---LHALSPRLPKLSLP-- 102
           LI  + T   SA SFL   DLHLLPSQ+L+LESLLCSTS+S   L +L+   P+ SLP  
Sbjct: 53  LIPHLVTATYSAISFLRHQDLHLLPSQSLSLESLLCSTSTSFSKLLSLTSFFPE-SLPLX 112

Query: 103 -PPLPPPRQCWFQRFLSATSDVDCDPRWNLSFRMSKSSFSLLLRLLSPIQSSPSSSVPPD 162
                 P QCWF RFL++ +  D DPRW   F +SK SF+LLLRLL+P  SS  S +PP+
Sbjct: 113 XXXXXXPAQCWFDRFLTSAA-ADYDPRWTHFFNLSKPSFTLLLRLLTPSLSS-LSPLPPN 172

Query: 163 CALAAALFRLAHGASYKAVGRRFGIDSADACRSFYAVCKAINEKLGHLLELRSDIDRIVV 222
            ALAA LFRLAH AS+ AV RRF IDS  ACR+FY VCKAINE LGHL E +SDI+RI+V
Sbjct: 173 FALAATLFRLAHSASFSAVSRRFNIDSPAACRAFYTVCKAINENLGHLFEFKSDINRIIV 232

Query: 223 GFGWISLPNCCGVLGLRRFGFEGEL--KNGSLLVQALVDAEGRFLDVSAGWPSSMKPATI 282
           GFGWISLPNCCGVLGL +F  +G+L  +NGSL+VQALVD+EGRFLDVSAGWPS++ P  +
Sbjct: 233 GFGWISLPNCCGVLGLEKFKLDGDLLGENGSLVVQALVDSEGRFLDVSAGWPSTLTPEKV 292

Query: 283 LRQSKLYAEIEKSSELLKGPVYNLDNEKPIPQYLIGDSCFPLLPWLLTPYMELNEEDSSG 342
           LRQSKL + +E++ E L GP + L +   IPQY++GDSCFPLLPWLLTPY +L+E     
Sbjct: 293 LRQSKLLSGVEETKEYLNGPSFELSDGNSIPQYILGDSCFPLLPWLLTPYKKLDENAGLN 352

Query: 343 FCGRAFNSTHGRAMALVNTAFCRLRARWKLLSKPWKEGCRDFFPFIILTGCLLQNFLIKC 402
               AFNS H   M LV  AF R+R RWKL++K W E C + FPF+I+T CLL NFLIKC
Sbjct: 353 SSEMAFNSVHSSGMELVRMAFGRVRKRWKLVAKKWSEQCVEAFPFVIVTCCLLHNFLIKC 412

Query: 403 SEKLDEEQDQEEGASCSSEEQKFPLFDGEIGDGRGKDIRDALALHLSSLNYRR 448
           SE +     Q+E A C S +Q+FP+FDGE+ D  GK IRDALA HLS  N RR
Sbjct: 413 SEAV-----QDEDAEC-SRDQEFPVFDGEV-DESGKRIRDALASHLSRANERR 455

[Close]

BLAST of CsGy2G002290 vs. TrEMBL
Match: tr|A0A2R6S1I5|A0A2R6S1I5_ACTCH (Nuclease OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc00673 PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 1.3e-123
Identity = 246/412 (59.71%), Postives = 300/412 (72.82%), Query Frame = 0


Query: 42  QLITLIETTISSAHSFLSLNDLHLLPSQTLALESLLCSTSSSLHALSPRL---PKLSLPP 101
           ++++ +    S+AHSFLS +DL LLPSQTL+LES L STS SL  L   L   P LS   
Sbjct: 33  RILSAVAAATSAAHSFLSHHDLRLLPSQTLSLESHLSSTSLSLSNLFSLLSLPPSLSSQL 92

Query: 102 PLPPPRQCWFQRFLSATSDVDCDPRWNLSFRMSKSSFSLLLRLLSPIQSSPSSSVPPDCA 161
           P PP    WF RFLSA +  D DPRW  +FRMSK SFSLLLRLL+P  SS  S +PP+ A
Sbjct: 93  PPPPSSPSWFHRFLSAAA-ADYDPRWTDAFRMSKPSFSLLLRLLTPSLSS-LSPIPPNLA 152

Query: 162 LAAALFRLAHGASYKAVGRRFGIDSADACRSFYAVCKAINEKLGHLLELRSDIDRIVVGF 221
           LAA LFRLAH ASYKAV RRF +DSA +CR+FY VCKAI +KLGH+ E +SDI+RIVVGF
Sbjct: 153 LAATLFRLAHAASYKAVSRRFMLDSATSCRAFYTVCKAIVDKLGHMFEFKSDINRIVVGF 212

Query: 222 GWISLPNCCGVLGLRRFGFEGEL--KNGSLLVQALVDAEGRFLDVSAGWPSSMKPATILR 281
           GWISLPNCCGVLG  RF  +G++  +NGSL+VQ LVD+EGRFLDVSAGWPS+M+P TILR
Sbjct: 213 GWISLPNCCGVLGFDRFQMDGKILGENGSLMVQGLVDSEGRFLDVSAGWPSTMRPETILR 272

Query: 282 QSKLYAEIEKSSELLKGPVYNLDNEKPIPQYLIGDSCFPLLPWLLTPYM-ELNEEDSSGF 341
           QS+L+A +++S ELL GP + L +   IPQY++G+SCFPLLPWLLTPY+   N  +SS +
Sbjct: 273 QSRLFAGVDESRELLNGPCFELGDGNSIPQYILGESCFPLLPWLLTPYVGHRNGLNSSEW 332

Query: 342 CGRAFNSTHGRAMALVNTAFCRLRARWKLLSKPWKEGCRDFFPFIILTGCLLQNFLIKCS 401
              AFNS H + M LV TAF R+RARWKLLSK WKE C + FPF+I+T CLL NFLIKCS
Sbjct: 333 ---AFNSVHRQGMELVGTAFGRVRARWKLLSKNWKEECIEAFPFVIVTCCLLHNFLIKCS 392

Query: 402 EKLDEEQDQEEGASCSSEEQKFPLFDGEIGDGRGKDIRDALALHLSSLNYRR 448
           E L      +      S EQ+   F+GE+ D  G+  RDALALHL+ ++ RR
Sbjct: 393 EAL-----PDVNVEYYSREQELLPFEGEV-DENGRRTRDALALHLNRVSQRR 433

The following BLAST results are available for this feature:

BLAST of CsGy2G002290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139403.1	5.3e-257	100.00	PREDICTED: putative nuclease HARBI1 [Cucumis sativus] >KGN60730.1 hypothetical p...	[more]
XP_008457314.1	4.2e-246	97.09	PREDICTED: putative nuclease HARBI1 [Cucumis melo]	[more]
XP_023536803.1	2.9e-218	86.64	protein ALP1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022938170.1	3.7e-218	86.64	protein ALP1-like [Cucurbita moschata] >XP_022938171.1 protein ALP1-like [Cucurb...	[more]
XP_022965738.1	5.4e-209	83.74	protein ALP1-like [Cucurbita maxima] >XP_022965739.1 protein ALP1-like [Cucurbit...	[more]

BLAST of CsGy2G002290 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G72270.1	8.9e-73	42.17	Ribosome 60S biogenesis N-terminal (InterPro:IPR021714)	[more]
AT3G55350.1	7.4e-35	28.81	PIF / Ping-Pong family of plant transposases	[more]
AT3G63270.1	1.4e-30	30.98	Putative harbinger transposase-derived nuclease (InterPro:IPR006912)	[more]
AT5G12010.1	1.5e-19	25.67	unknown protein	[more]
AT4G29780.1	6.9e-17	26.02	unknown protein	[more]

BLAST of CsGy2G002290 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M2U3\|ALPL_ARATH	1.3e-33	28.81	Protein ALP1-like OS=Arabidopsis thaliana OX=3702 GN=At3g55350 PE=2 SV=1	[more]
sp\|Q94K49\|ALP1_ARATH	2.6e-29	30.98	Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 OS=Arabidopsis thaliana OX=...	[more]
sp\|B0BN95\|HARB1_RAT	1.2e-10	24.19	Putative nuclease HARBI1 OS=Rattus norvegicus OX=10116 GN=Harbi1 PE=2 SV=1	[more]
sp\|Q8BR93\|HARB1_MOUSE	1.0e-09	24.00	Putative nuclease HARBI1 OS=Mus musculus OX=10090 GN=Harbi1 PE=2 SV=1	[more]

BLAST of CsGy2G002290 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LFB5\|A0A0A0LFB5_CUCSA	3.5e-257	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008700 PE=4 SV=1	[more]
tr\|A0A1S3C5W6\|A0A1S3C5W6_CUCME	2.8e-246	97.09	putative nuclease HARBI1 OS=Cucumis melo OX=3656 GN=LOC103497032 PE=4 SV=1	[more]
tr\|M5VQK6\|M5VQK6_PRUPE	9.0e-128	59.02	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G257400 PE=4 SV=1	[more]
tr\|A0A068UQF2\|A0A068UQF2_COFCA	6.0e-124	59.32	Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00031239001 PE=4 ...	[more]
tr\|A0A2R6S1I5\|A0A2R6S1I5_ACTCH	1.3e-123	59.71	Nuclease OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc00673 PE=4...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR027806	HARBI1_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G002290.1	CsGy2G002290.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027806	Harbinger transposase-derived nuclease domain	PFAM	PF13359	DDE_Tnp_4	coord: 239..389 e-value: 1.1E-15 score: 57.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 404..427
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 32..444
None	No IPR available	PANTHER	PTHR22930:SF87	SUBFAMILY NOT NAMED	coord: 32..444

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy2G002290	Csa2G008700	Cucumber (Chinese Long) v2	cgybcuB056
CsGy2G002290	ClCG11G003520	Watermelon (Charleston Gray)	cgybwcgB094
CsGy2G002290	CSPI02G02190	Wild cucumber (PI 183967)	cgybcpiB056
CsGy2G002290	CmaCh12G011760	Cucurbita maxima (Rimu)	cgybcmaB178
CsGy2G002290	CmoCh12G012000	Cucurbita moschata (Rifu)	cgybcmoB170
CsGy2G002290	Lsi11G003640	Bottle gourd (USVL1VR-Ls)	cgyblsiB089
CsGy2G002290	Cp4.1LG07g11180	Cucurbita pepo (Zucchini)	cgybcpeB262
CsGy2G002290	CsaV3_2G003390	Cucumber (Chinese Long) v3	cgybcucB064
CsGy2G002290	Cla97C11G210040	Watermelon (97103) v2	cgybwmbB098
CsGy2G002290	Bhi06G001590	Wax gourd	cgybwgoB133
CsGy2G002290	Carg17471	Silver-seed gourd	carcgybB0269

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy2G002290	Cucurbita pepo (Zucchini)	cgybcpeB168
CsGy2G002290	Cucumber (Gy14) v2	cgybcgybB050
CsGy2G002290	Cucurbita maxima (Rimu)	cgybcmaB257
CsGy2G002290	Cucurbita moschata (Rifu)	cgybcmoB142
CsGy2G002290	Cucurbita moschata (Rifu)	cgybcmoB243
CsGy2G002290	Cucurbita pepo (Zucchini)	cgybcpeB257
CsGy2G002290	Melon (DHL92) v3.5.1	cgybmeB116
CsGy2G002290	Melon (DHL92) v3.6.1	cgybmedB113
CsGy2G002290	Melon (DHL92) v3.6.1	cgybmedB118
CsGy2G002290	Watermelon (Charleston Gray)	cgybwcgB133
CsGy2G002290	Watermelon (97103) v1	cgybwmB122
CsGy2G002290	Watermelon (97103) v1	cgybwmB154
CsGy2G002290	Silver-seed gourd	carcgybB0573